RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TCF25 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000001472

Ensembl transcript IDs: ENSMUST00000057934.10, ENSMUST00000108840.4, ENSMUST00000211932.2, ENSMUST00000212470.2, ENSMUST00000212569.2, ENSMUST00000212571.2, ENSMUST00000212880.2

Found 391 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCCCCTCGCCCTCAGGATTGTCCTCCCGAGGCACCTCCAGGTCGTTaGAGTGGAAGTTGGCCATCATGTCACGTACGGCCAACATCAGCC +
Preference number: 1 (lower is better)
Translates to: PPRPQDCPPEAPPGR*SGSWPSCHVRPTSA
Trigger: GGCTGATGTTGGCCGTACGTGACATGATGGCCAACTTCCACTTCAACGACCTGGAGGTGCCTCGGGAGGACAATCCTGAGGGCGAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR TCA 90 bp TTGGCCATCATGTCACGTACGGCCAACATCAGCCTGTTCAAGCCTTaGTTGCGGTTCGGACCCCCGGCCACTCCTTCCTCCAGCCTCTCC +
Preference number: 1 (lower is better)
Translates to: LAIMSRTANISLFKP*LRFGPPATPSSSLS
Trigger: GGAGAGGCTGGAGGAAGGAGTGGCCGGGGGTCCGAACCGCAATCAAGGCTTGAACAGGCTGATGTTGGCCGTACGTGACATGATGGCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR TCA 90 bp CTGCGACACTTCCAGCCCTTCCAGTTTCCTCTAAGGTTCCCAGGCTaGGACTGTCAGTCAGCAGCAGACCATGTGCCAGGCCCTGGGTTT +
Preference number: 1 (lower is better)
Translates to: LRHFQPFQFPLRFPG*DCQSAADHVPGPGF
Trigger: AAACCCAGGGCCTGGCACATGGTCTGCTGCTGACTGACAGTCTCAGCCTGGGAACCTTAGAGGAAACTGGAAGGGCTGGAAGTGTCGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
3UTR TCA 90 bp CTACAGGAGCGAGCTCTCACTGTGCAGCACATGAGTCCTGGGGACTaGATTCAGGCCATCGGGCCTGCCAGCCAGTACCGTTACATCAGA +
Preference number: 1 (lower is better)
Translates to: LQERALTVQHMSPGD*IQAIGPASQYRYIR
Trigger: TCTGATGTAACGGTACTGGCTGGCAGGCCCGATGGCCTGAATTCAGTCCCCAGGACTCATGTGCTGCACAGTGAGAGCTCGCTCCTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR CCA 90 bp TCGCCCTCAGGATTGTCCTCCCGAGGCACCTCCAGGTCGTTGAAGTaGAAGTTGGCCATCATGTCACGTACGGCCAACATCAGCCTGTTC +
Preference number: 1 (lower is better)
Translates to: SPSGLSSRGTSRSLK*KLAIMSRTANISLF
Trigger: GAACAGGCTGATGTTGGCCGTACGTGACATGATGGCCAACTTCCACTTCAACGACCTGGAGGTGCCTCGGGAGGACAATCCTGAGGGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR TCA 90 bp ATAGGGTGCACCCAGTGTGGGGCGCACTGCTTCTGGGACTGTTTCTaGGGACACTGGAGGAAGCTCACCCAGAGTATAACCCACTCCCTT +
Preference number: 1 (lower is better)
Translates to: IGCTQCGAHCFWDCF*GHWRKLTQSITHSL
Trigger: AAGGGAGTGGGTTATACTCTGGGTGAGCTTCCTCCAGTGTCCTCAGAAACAGTCCCAGAAGCAGTGCGCCCCACACTGGGTGCACCCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
3UTR TCA 90 bp TTGAGATCCTGGGTTCAACGGCTGAGGCAACTTAGGCCCCAAGATTaGGCCTGTCCCCTCCCAAAGTCCCTGCCCAGAAGAAGAAGCAGC +
Preference number: 1 (lower is better)
Translates to: LRSWVQRLRQLRPQD*ACPLPKSLPRRRSS
Trigger: GCTGCTTCTTCTTCTGGGCAGGGACTTTGGGAGGGGACAGGCTCAATCTTGGGGCCTAAGTTGCCTCAGCCGTTGAACCCAGGATCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR GCA 90 bp GGCAACTTAGGCCCCAAGATTGAGCCTGTCCCCTCCCAAAGTCCCTaGCCAGAAGAAGAAGCAGCTGCTCTAGAAAGCCAGATGCGCTCA +
Preference number: 1 (lower is better)
Translates to: GNLGPKIEPVPSQSP*PEEEAAALESQMRS
Trigger: TGAGCGCATCTGGCTTTCTAGAGCAGCTGCTTCTTCTTCTGGGCAGGGACTTTGGGAGGGGACAGGCTCAATCTTGGGGCCTAAGTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR CCA 90 bp GGCCTCTCAGGAAACAGGCCTGCAGGTGGGACGTTCCTGAAGGCCTaGGGTATCCTCTGCTTCACTGTTCCTAGAGCATGGCTCTTCATT +
Preference number: 1 (lower is better)
Translates to: GLSGNRPAGGTFLKA*GILCFTVPRAWLFI
Trigger: AATGAAGAGCCATGCTCTAGGAACAGTGAAGCAGAGGATACCCCAGGCCTTCAGGAACGTCCCACCTGCAGGCCTGTTTCCTGAGAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
ENSMUST00000212880.2
3UTR CCA 90 bp TTAACTCCAACCAGAAATGAATTCGGGAACGTGACTGCACGGCTCTaGGCACAGCATCTGGACAGTTCAGTCCCAGTCCCCCTCGCCCTC +
Preference number: 1 (lower is better)
Translates to: LTPTRNEFGNVTARL*AQHLDSSVPVPLAL
Trigger: GAGGGCGAGGGGGACTGGGACTGAACTGTCCAGATGCTGTGCCCAGAGCCGTGCAGTCACGTTCCCGAATTCATTTCTGGTTGGAGTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR CCA 90 bp TGTGTGGAAGGTTCAGGGGCCTCTAGCAAGGAGCAGATAGGGTCCTaGTACTGCAGACCCTGGGACAACCCTTCTATGCACCATGTTACA +
Preference number: 1 (lower is better)
Translates to: CVEGSGASSKEQIGS*YCRPWDNPSMHHVT
Trigger: TGTAACATGGTGCATAGAAGGGTTGTCCCAGGGTCTGCAGTACCAGGACCCTATCTGCTCCTTGCTAGAGGCCCCTGAACCTTCCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
3UTR GCA 90 bp GAAGGTTCAGGGGCCTCTAGCAAGGAGCAGATAGGGTCCTGGTACTaGAGACCCTGGGACAACCCTTCTATGCACCATGTTACAAATGCT +
Preference number: 1 (lower is better)
Translates to: EGSGASSKEQIGSWY*RPWDNPSMHHVTNA
Trigger: AGCATTTGTAACATGGTGCATAGAAGGGTTGTCCCAGGGTCTGCAGTACCAGGACCCTATCTGCTCCTTGCTAGAGGCCCCTGAACCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
3UTR GCA 90 bp AACAGGCCTGCAGGTGGGACGTTCCTGAAGGCCTGGGGTATCCTCTaGTTCACTGTTCCTAGAGCATGGCTCTTCATTTTGGAATTCGTT +
Preference number: 1 (lower is better)
Translates to: NRPAGGTFLKAWGIL*FTVPRAWLFILEFV
Trigger: AACGAATTCCAAAATGAAGAGCCATGCTCTAGGAACAGTGAAGCAGAGGATACCCCAGGCCTTCAGGAACGTCCCACCTGCAGGCCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
ENSMUST00000212880.2
3UTR TCA 90 bp GATCCTGAACTTCTAACCCTCTTGTCCCCCTCTCTGCTTGAATGCTaGGATTACACACGAACACCAGCACCGCTGGCTTTTGCAGTGCAT +
Preference number: 1 (lower is better)
Translates to: DPELLTLLSPSLLEC*DYTRTPAPLAFAVH
Trigger: ATGCACTGCAAAAGCCAGCGGTGCTGGTGTTCGTGTGTAATCTCAGCATTCAAGCAGAGAGGGGGACAAGAGGGTTAGAAGTTCAGGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
3UTR GCA 90 bp TTCCTAGAGCATGGCTCTTCATTTTGGAATTCGTTGTCACGTGGTTaGAGAATAGCTGCTGCAGCTCCAGATGTCACATCCTCATCCGGA +
Preference number: 1 (lower is better)
Translates to: FLEHGSSFWNSLSRG*RIAAAAPDVTSSSG
Trigger: TCCGGATGAGGATGTGACATCTGGAGCTGCAGCAGCTATTCTGCAACCACGTGACAACGAATTCCAAAATGAAGAGCCATGCTCTAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
ENSMUST00000212880.2
3UTR GCA 90 bp CTCTTCATTTTGGAATTCGTTGTCACGTGGTTGCAGAATAGCTGCTaGAGCTCCAGATGTCACATCCTCATCCGGATGGACTTACAGCTG +
Preference number: 1 (lower is better)
Translates to: LFILEFVVTWLQNSC*SSRCHILIRMDLQL
Trigger: CAGCTGTAAGTCCATCCGGATGAGGATGTGACATCTGGAGCTGCAGCAGCTATTCTGCAACCACGTGACAACGAATTCCAAAATGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR TCA 90 bp GAACTTTCTCTGAGAGGCAGCAAACAGGTTTTCTCCCTGACTACATaGAAATGCACAAATGACCAACAATTCTGCACAGAACACATAGGC +
Preference number: 1 (lower is better)
Translates to: ELSLRGSKQVFSLTT*KCTNDQQFCTEHIG
Trigger: GCCTATGTGTTCTGTGCAGAATTGTTGGTCATTTGTGCATTTTCATGTAGTCAGGGAGAAAACCTGTTTGCTGCCTCTCAGAGAAAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
3UTR-3UTR GCA 90 bp CACATAGGCAGGCGCCTCTTGGGAAAGGGGCCAGGGAGGTACGGGAGGAGCGGGCTCAGGAAACAGGCCTaGAGGTGGGACGTTCCTGAA +
Preference number: 2 (lower is better)
Translates to: HIGRRLLGKGPGRYGRSGLRKQA*RWDVPE
Trigger: TTCAGGAACGTCCCACCTGCAGGCCTGTTTCCTGAG...CCCGCTCCTCCCGTACCTCCCTGGCCCCTTTCCCAAGAGGCGCCTGCCTATGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
3UTR-3UTR CCA 90 bp GGAAAGGGGCCAGGGAGGTACGGGAGGAGCGGGACACACTGTCACCCCTACCTGGTGACTGCACGGCTCTaGGCACAGCATCTGGACAGT +
Preference number: 2 (lower is better)
Translates to: GKGPGRYGRSGTHCHPYLVTARL*AQHLDS
Trigger: ACTGTCCAGATGCTGTGCCCAGAGCCGTGCAGTCAC...CAGGTAGGGGTGACAGTGTGTCCCGCTCCTCCCGTACCTCCCTGGCCCCTTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR-3UTR CCA 90 bp CACATAGGCAGGCGCCTCTTGGGAAAGGGGCCAGGGAGGTACGGGAGGAGCGGGACCTCCGGCCTTGCCTaGCTATGGTCTTTGTTCCTG +
Preference number: 2 (lower is better)
Translates to: HIGRRLLGKGPGRYGRSGTSGLA*LWSLFL
Trigger: CAGGAACAAAGACCATAGCCAGGCAAGGCCGGAGGT...CCCGCTCCTCCCGTACCTCCCTGGCCCCTTTCCCAAGAGGCGCCTGCCTATGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR-3UTR GCA 90 bp CACATAGGCAGGCGCCTCTTGGGAAAGGGGCCAGGGAGGTACGGGAGGAGCGGGCGCTGGCTTTTGCAGTaGATACTAAGGGAGCAGCTG +
Preference number: 2 (lower is better)
Translates to: HIGRRLLGKGPGRYGRSGRWLLQ*ILREQL
Trigger: CAGCTGCTCCCTTAGTATGCACTGCAAAAGCCAGCG...CCCGCTCCTCCCGTACCTCCCTGGCCCCTTTCCCAAGAGGCGCCTGCCTATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR-3UTR GCA 90 bp CGCCTCTTGGGAAAGGGGCCAGGGAGGTACGGGAGGAGCGGGACACACTGTCACCCCTCCCAAAGTCCCTaGCCAGAAGAAGAAGCAGCT +
Preference number: 2 (lower is better)
Translates to: RLLGKGPGRYGRSGTHCHPSQSP*PEEEAA
Trigger: AGCTGCTTCTTCTTCTGGGCAGGGACTTTGGGAGGG...GTGACAGTGTGTCCCGCTCCTCCCGTACCTCCCTGGCCCCTTTCCCAAGAGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR CAA 90 bp CACAGCATCTGGACAGTTCAGTCCCAGTCCCCCTCGCCCTCAGGATaGTCCTCCCGAGGCACCTCCAGGTCGTTGAAGTGGAAGTTGGCC +
Preference number: 2 (lower is better)
Translates to: HSIWTVQSQSPSPSG*SSRGTSRSLKWKLA
Trigger: GGCCAACTTCCACTTCAACGACCTGGAGGTGCCTCGGGAGGACAATCCTGAGGGCGAGGGGGACTGGGACTGAACTGTCCAGATGCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR-3UTR TCA 90 bp CACATAGGCAGGCGCCTCTTGGGAAAGGGGCCAGGGAGGTACGGGAGGAGCGGGCTACGGGCTACACAGTaGGACTCTGTCTCAGAAAGT +
Preference number: 2 (lower is better)
Translates to: HIGRRLLGKGPGRYGRSGLRATQ*DSVSES
Trigger: ACTTTCTGAGACAGAGTCTCACTGTGTAGCCCGTAG...CCCGCTCCTCCCGTACCTCCCTGGCCCCTTTCCCAAGAGGCGCCTGCCTATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
3UTR-3UTR CCA 90 bp GGGAAAGGGGCCAGGGAGGTACGGGAGGAGCGGGACACACTGTCACCCCTACCTACGTTCCTGAAGGCCTaGGGTATCCTCTGCTTCACT +
Preference number: 2 (lower is better)
Translates to: GKGAREVREERDTLSPLPTFLKA*GILCFT
Trigger: AGTGAAGCAGAGGATACCCCAGGCCTTCAGGAACGT...AGGTAGGGGTGACAGTGTGTCCCGCTCCTCCCGTACCTCCCTGGCCCCTTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
3UTR-3UTR CCA 90 bp GGAAAGGGGCCAGGGAGGTACGGGAGGAGCGGGACACACTGTCACCCCTACCTGACGTTCCTGAAGGCCTaGGGTATCCTCTGCTTCACT +
Preference number: 2 (lower is better)
Translates to: GKGPGRYGRSGTHCHPYLTFLKA*GILCFT
Trigger: AGTGAAGCAGAGGATACCCCAGGCCTTCAGGAACGT...CAGGTAGGGGTGACAGTGTGTCCCGCTCCTCCCGTACCTCCCTGGCCCCTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
3UTR CAA 90 bp GTTGGCCATCATGTCACGTACGGCCAACATCAGCCTGTTCAAGCCTaGATTGCGGTTCGGACCCCCGGCCACTCCTTCCTCCAGCCTCTC +
Preference number: 2 (lower is better)
Translates to: VGHHVTYGQHQPVQA*IAVRTPGHSFLQPL
Trigger: GAGAGGCTGGAGGAAGGAGTGGCCGGGGGTCCGAACCGCAATCAAGGCTTGAACAGGCTGATGTTGGCCGTACGTGACATGATGGCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR CAA 90 bp TCCCCCTCGCCCTCAGGATTGTCCTCCCGAGGCACCTCCAGGTCGTaGAAGTGGAAGTTGGCCATCATGTCACGTACGGCCAACATCAGC +
Preference number: 2 (lower is better)
Translates to: SPSPSGLSSRGTSRS*KWKLAIMSRTANIS
Trigger: GCTGATGTTGGCCGTACGTGACATGATGGCCAACTTCCACTTCAACGACCTGGAGGTGCCTCGGGAGGACAATCCTGAGGGCGAGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR-3UTR GCA 90 bp GGAAAGGGGCCAGGGAGGTACGGGAGGAGCGGGACACACTGTCACCCCTACCTGGCTGTTGAGATGACATaGAGGTTAGGTGTGGTGGTG +
Preference number: 2 (lower is better)
Translates to: GKGPGRYGRSGTHCHPYLAVEMT*RLGVVV
Trigger: CACCACCACACCTAACCTGCATGTCATCTCAACAGC...CAGGTAGGGGTGACAGTGTGTCCCGCTCCTCCCGTACCTCCCTGGCCCCTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
3UTR-3UTR GCA 90 bp CCCTCAGGATTGTCCTCCCGAGGCACCTCCAGGTCGTTGAAGTGGAAGTTGGCCCTCAGGAAACAGGCCTaGAGGTGGGACGTTCCTGAA +
Preference number: 2 (lower is better)
Translates to: PSGLSSRGTSRSLKWKLALRKQA*RWDVPE
Trigger: TTCAGGAACGTCCCACCTGCAGGCCTGTTTCCTGAG...GGCCAACTTCCACTTCAACGACCTGGAGGTGCCTCGGGAGGACAATCCTGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR-3UTR CCA 90 bp GACCATGTGCCAGGCCCTGGGTTTGACCTCAGTGTTGCAAACATGCTGGGTGTAAGGGTGCACCCAGTGTaGGGCGCACTGCTTCTGGGA +
Preference number: 2 (lower is better)
Translates to: DHVPGPGFDLSVANMLGVRVHPV*GALLLG
Trigger: TCCCAGAAGCAGTGCGCCCCACACTGGGTGCACCCT...TACACCCAGCATGTTTGCAACACTGAGGTCAAACCCAGGGCCTGGCACATGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
3UTR-3UTR CCA 90 bp CAGGCGGATCTCCGAGGCCAGCCTGGTCTACAGAGTAAAGGGCGGCCTGGTCTAACGTTCCTGAAGGCCTaGGGTATCCTCTGCTTCACT +
Preference number: 2 (lower is better)
Translates to: QADLRGQPGLQSKGRPGLTFLKA*GILCFT
Trigger: AGTGAAGCAGAGGATACCCCAGGCCTTCAGGAACGT...TAGACCAGGCCGCCCTTTACTCTGTAGACCAGGCTGGCCTCGGAGATCCGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
3UTR-3UTR CCA 90 bp GAGGACAAGCTACAGGAGCGAGCTCTCACTGTGCAGCACATGAGTCCTGGGGACACCGTCAGTGCTGCCTaGGAGACACCTGACACAGCT +
Preference number: 2 (lower is better)
Translates to: EDKLQERALTVQHMSPGDTVSAA*ETPDTA
Trigger: AGCTGTGTCAGGTGTCTCCCAGGCAGCACTGACGGT...GTCCCCAGGACTCATGTGCTGCACAGTGAGAGCTCGCTCCTGTAGCTTGTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR-3UTR TCA 90 bp AGACAGAGGCAGGCGGATCTCCGAGGCCAGCCTGGTCTACAGAGTAAAGGGCGGCTACGGGCTACACAGTaGGACTCTGTCTCAGAAAGT +
Preference number: 2 (lower is better)
Translates to: RQRQADLRGQPGLQSKGRLRATQ*DSVSES
Trigger: ACTTTCTGAGACAGAGTCTCACTGTGTAGCCCGTAG...CCGCCCTTTACTCTGTAGACCAGGCTGGCCTCGGAGATCCGCCTGCCTCTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
3UTR-3UTR CCA 90 bp CACATAGGCAGGCGCCTCTTGGGAAAGGGGCCAGGGAGGTACGGGAGGAGCGGGCATGGCTCTTCATTTTaGAATTCGTTGTCACGTGGT +
Preference number: 2 (lower is better)
Translates to: HIGRRLLGKGPGRYGRSGHGSSF*NSLSRG
Trigger: ACCACGTGACAACGAATTCCAAAATGAAGAGCCATG...CCCGCTCCTCCCGTACCTCCCTGGCCCCTTTCCCAAGAGGCGCCTGCCTATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
3UTR CAA 90 bp ACAAATGACCAACAATTCTGCACAGAACACATAGGCAGGCGCCTCTaGGGAAAGGGGCCAGGGAGGTACGGGAGGAGCGGGACACACTGT +
Preference number: 2 (lower is better)
Translates to: TNDQQFCTEHIGRRL*GKGPGRYGRSGTHC
Trigger: ACAGTGTGTCCCGCTCCTCCCGTACCTCCCTGGCCCCTTTCCCAAGAGGCGCCTGCCTATGTGTTCTGTGCAGAATTGTTGGTCATTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
3UTR-3UTR TCA 90 bp CACATAGGCAGGCGCCTCTTGGGAAAGGGGCCAGGGAGGTACGGGAGGAGCGGGAACAGGTTTTCTCCCTaGCTACATGAAAATGCACAA +
Preference number: 2 (lower is better)
Translates to: HIGRRLLGKGPGRYGRSGNRFSP*LHENAQ
Trigger: TTGTGCATTTTCATGTAGTCAGGGAGAAAACCTGTT...CCCGCTCCTCCCGTACCTCCCTGGCCCCTTTCCCAAGAGGCGCCTGCCTATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
3UTR-3UTR CCA 90 bp TCTAGCAAGGAGCAGATAGGGTCCTGGTACTGCAGACCCTGGGACAACCCTTCTGTGACTGCACGGCTCTaGGCACAGCATCTGGACAGT +
Preference number: 2 (lower is better)
Translates to: SSKEQIGSWYCRPWDNPSVTARL*AQHLDS
Trigger: ACTGTCCAGATGCTGTGCCCAGAGCCGTGCAGTCAC...AGAAGGGTTGTCCCAGGGTCTGCAGTACCAGGACCCTATCTGCTCCTTGCTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
3UTR CAA 90 bp TCAGGATTGTCCTCCCGAGGCACCTCCAGGTCGTTGAAGTGGAAGTaGGCCATCATGTCACGTACGGCCAACATCAGCCTGTTCAAGCCT +
Preference number: 2 (lower is better)
Translates to: SGLSSRGTSRSLKWK*AIMSRTANISLFKP
Trigger: AGGCTTGAACAGGCTGATGTTGGCCGTACGTGACATGATGGCCAACTTCCACTTCAACGACCTGGAGGTGCCTCGGGAGGACAATCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR-3UTR TCA 90 bp TTGCCTGGCTATGGTCTTTGTTCCTGCCACTGGACTCGGGTTCTTGGTCAGGGTTTTCTGCCTCCACCCTaGGCAGGACTTGCCCATGTT +
Preference number: 2 (lower is better)
Translates to: LPGYGLCSCHWTRVLGQGFLPPP*AGLAHV
Trigger: AACATGGGCAAGTCCTGCTCAGGGTGGAGGCAGAAA...ACCCTGACCAAGAACCCGAGTCCAGTGGCAGGAACAAAGACCATAGCCAGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR-3UTR TCA 90 bp TTGCCTGGCTATGGTCTTTGTTCCTGCCACTGGACTCGGGTTCTTGGTCAGGGTGCACCTCCAGGTCGTTaGAGTGGAAGTTGGCCATCA +
Preference number: 2 (lower is better)
Translates to: LPGYGLCSCHWTRVLGQGAPPGR*SGSWPS
Trigger: TGATGGCCAACTTCCACTTCAACGACCTGGAGGTGC...ACCCTGACCAAGAACCCGAGTCCAGTGGCAGGAACAAAGACCATAGCCAGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR CAA 90 bp TGCTTGAATGCTGAGATTACACACGAACACCAGCACCGCTGGCTTTaGCAGTGCATACTAAGGGAGCAGCTGCCCAGCTGCGACACTTCC +
Preference number: 2 (lower is better)
Translates to: CLNAEITHEHQHRWL*QCILREQLPSCDTS
Trigger: GGAAGTGTCGCAGCTGGGCAGCTGCTCCCTTAGTATGCACTGCAAAAGCCAGCGGTGCTGGTGTTCGTGTGTAATCTCAGCATTCAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
3UTR CAA 90 bp CCTGGAGCTTTCCACAAACAGCTTATGAGACACAGACCTCCGGCCTaGCCTGGCTATGGTCTTTGTTCCTGCCACTGGACTCGGGTTCTT +
Preference number: 2 (lower is better)
Translates to: PGAFHKQLMRHRPPA*PGYGLCSCHWTRVL
Trigger: AAGAACCCGAGTCCAGTGGCAGGAACAAAGACCATAGCCAGGCAAGGCCGGAGGTCTGTGTCTCATAAGCTGTTTGTGGAAAGCTCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR-3UTR CCA 90 bp CAGGCGGATCTCCGAGGCCAGCCTGGTCTACAGAGTAAAGGGCGGCCTGGTCTACATGGCTCTTCATTTTaGAATTCGTTGTCACGTGGT +
Preference number: 2 (lower is better)
Translates to: QADLRGQPGLQSKGRPGLHGSSF*NSLSRG
Trigger: ACCACGTGACAACGAATTCCAAAATGAAGAGCCATG...TAGACCAGGCCGCCCTTTACTCTGTAGACCAGGCTGGCCTCGGAGATCCGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
3UTR-3UTR CCA 90 bp GGAAAGGGGCCAGGGAGGTACGGGAGGAGCGGGACACACTGTCACCCCTACCTGGGTGGTGTGAAGGACTaGTTTTATTTTTCACCATTA +
Preference number: 2 (lower is better)
Translates to: GKGPGRYGRSGTHCHPYLGGVKD*FYFSPL
Trigger: TAATGGTGAAAAATAAAACCAGTCCTTCACACCACC...CAGGTAGGGGTGACAGTGTGTCCCGCTCCTCCCGTACCTCCCTGGCCCCTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
3UTR-3UTR TCA 90 bp GCACAGCATCTGGACAGTTCAGTCCCAGTCCCCCTCGCCCTCAGGATTGTCCTCCCATGTTACAAATGCTaGAGTGTGAGGCACATGATA +
Preference number: 2 (lower is better)
Translates to: AQHLDSSVPVPLALRIVLPCYKC*SVRHMI
Trigger: TATCATGTGCCTCACACTTCAGCATTTGTAACATGG...GAGGACAATCCTGAGGGCGAGGGGGACTGGGACTGAACTGTCCAGATGCTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR-3UTR TCA 90 bp GAGGACAAGCTACAGGAGCGAGCTCTCACTGTGCAGCACATGAGTCCTGGGGACCTTGTGAACTTTCTCTaGGAGGCAGCAAACAGGTTT +
Preference number: 2 (lower is better)
Translates to: EDKLQERALTVQHMSPGDLVNFL*EAANRF
Trigger: AAACCTGTTTGCTGCCTCTCAGAGAAAGTTCACAAG...GTCCCCAGGACTCATGTGCTGCACAGTGAGAGCTCGCTCCTGTAGCTTGTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR-3UTR CCA 90 bp GGAAACAGGCCTGCAGGTGGGACGTTCCTGAAGGCCTGGGGTATCCTCTGCTTCCATGGCTCTTCATTTTaGAATTCGTTGTCACGTGGT +
Preference number: 2 (lower is better)
Translates to: GNRPAGGTFLKAWGILCFHGSSF*NSLSRG
Trigger: ACCACGTGACAACGAATTCCAAAATGAAGAGCCATG...GAAGCAGAGGATACCCCAGGCCTTCAGGAACGTCCCACCTGCAGGCCTGTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
ENSMUST00000212880.2
3UTR-3UTR CCA 90 bp AACACTTCTGAAGCCGATCATCTGATGGCCTCTCAGGAAACAGGCCTGCAGGTGACGTTCCTGAAGGCCTaGGGTATCCTCTGCTTCACT +
Preference number: 2 (lower is better)
Translates to: NTSEADHLMASQETGLQVTFLKA*GILCFT
Trigger: AGTGAAGCAGAGGATACCCCAGGCCTTCAGGAACGT...CACCTGCAGGCCTGTTTCCTGAGAGGCCATCAGATGATCGGCTTCAGAAGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
ENSMUST00000212880.2
3UTR-3UTR CCA 90 bp TTCTGCACAGAACACATAGGCAGGCGCCTCTTGGGAAAGGGGCCAGGGAGGTACTTTAATCCTAACATTTaGGAGACAGAGGCAGGCGGA +
Preference number: 2 (lower is better)
Translates to: FCTEHIGRRLLGKGPGRYFNPNI*ETEAGG
Trigger: TCCGCCTGCCTCTGTCTCCCAAATGTTAGGATTAAA...GTACCTCCCTGGCCCCTTTCCCAAGAGGCGCCTGCCTATGTGTTCTGTGCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
3UTR-3UTR CCA 90 bp CCATTCCTAGGCAGTCCTTCCTCCCCTTGGCTGAAACTCACCACAGGCCATTCCTTTAATCCTAACATTTaGGAGACAGAGGCAGGCGGA +
Preference number: 2 (lower is better)
Translates to: PFLGSPSSPWLKLTTGHSFNPNI*ETEAGG
Trigger: TCCGCCTGCCTCTGTCTCCCAAATGTTAGGATTAAA...GGAATGGCCTGTGGTGAGTTTCAGCCAAGGGGAGGAAGGACTGCCTAGGAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR-3UTR GCA 90 bp TTAGGTGTGGTGGTGCACTCTTTTAATCCTAACATTTGGGAGACAGAGGCAGGCCTCAGGAAACAGGCCTaGAGGTGGGACGTTCCTGAA +
Preference number: 2 (lower is better)
Translates to: LGVVVHSFNPNIWETEAGLRKQA*RWDVPE
Trigger: TTCAGGAACGTCCCACCTGCAGGCCTGTTTCCTGAG...GCCTGCCTCTGTCTCCCAAATGTTAGGATTAAAAGAGTGCACCACCACACCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
3UTR CAA 90 bp TGGGGTATCCTCTGCTTCACTGTTCCTAGAGCATGGCTCTTCATTTaGGAATTCGTTGTCACGTGGTTGCAGAATAGCTGCTGCAGCTCC +
Preference number: 2 (lower is better)
Translates to: WGILCFTVPRAWLFI*EFVVTWLQNSCCSS
Trigger: GGAGCTGCAGCAGCTATTCTGCAACCACGTGACAACGAATTCCAAAATGAAGAGCCATGCTCTAGGAACAGTGAAGCAGAGGATACCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
ENSMUST00000212880.2
3UTR-3UTR TCA 90 bp TGCAGGTTAGGTGTGGTGGTGCACTCTTTTAATCCTAACATTTGGGAGACAGAGTTCTGGGACTGTTTCTaGGGACACTGGAGGAAGCTC +
Preference number: 2 (lower is better)
Translates to: CRLGVVVHSFNPNIWETEFWDCF*GHWRKL
Trigger: GAGCTTCCTCCAGTGTCCTCAGAAACAGTCCCAGAA...CTCTGTCTCCCAAATGTTAGGATTAAAAGAGTGCACCACCACACCTAACCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR-3UTR GCA 90 bp GAGATGGGATCTCATATAACTCAGACTGGCTTTGAACTTAATTATGTAGCAGAGGAGCAGCTGCCCAGCTaGGACACTTCCAGCCCTTCC +
Preference number: 2 (lower is better)
Translates to: EMGSHITQTGFELNYVAEEQLPS*DTSSPS
Trigger: GGAAGGGCTGGAAGTGTCGCAGCTGGGCAGCTGCTC...CTCTGCTACATAATTAAGTTCAAAGCCAGTCTGAGTTATATGAGATCCCATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
3UTR-3UTR CCA 90 bp CATAGCAAGCTCCAGGCCACTACGGGCTACACAGTGAGACTCTGTCTCAGAAAGCATGGCTCTTCATTTTaGAATTCGTTGTCACGTGGT +
Preference number: 2 (lower is better)
Translates to: HSKLQATTGYTVRLCLRKHGSSF*NSLSRG
Trigger: ACCACGTGACAACGAATTCCAAAATGAAGAGCCATG...CTTTCTGAGACAGAGTCTCACTGTGTAGCCCGTAGTGGCCTGGAGCTTGCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
3UTR CAA 90 bp TCATTTCCACAACATACATCCATTCCTAGGCAGTCCTTCCTCCCCTaGGCTGAAACTCACCACAGGCCATTCCAACTTGGAAACTCACAT +
Preference number: 2 (lower is better)
Translates to: SFPQHTSIPRQSFLP*AETHHRPFQLGNSH
Trigger: ATGTGAGTTTCCAAGTTGGAATGGCCTGTGGTGAGTTTCAGCCAAGGGGAGGAAGGACTGCCTAGGAATGGATGTATGTTGTGGAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR-3UTR CCA 90 bp GACCATGTGCCAGGCCCTGGGTTTGACCTCAGTGTTGCAAACATGCTGGGTGTAGGTGGTGTGAAGGACTaGTTTTATTTTTCACCATTA +
Preference number: 2 (lower is better)
Translates to: DHVPGPGFDLSVANMLGVGGVKD*FYFSPL
Trigger: TAATGGTGAAAAATAAAACCAGTCCTTCACACCACC...TACACCCAGCATGTTTGCAACACTGAGGTCAAACCCAGGGCCTGGCACATGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR-3UTR CCA 90 bp AGCAAGCTCCAGGCCACTACGGGCTACACAGTGAGACTCTGTCTCAGAAAGTTAATGATGATCCACAGGTaGTGTGAAGGACTGGTTTTA +
Preference number: 2 (lower is better)
Translates to: SKLQATTGYTVRLCLRKLMMIHR*CEGLVL
Trigger: TAAAACCAGTCCTTCACACCACCTGTGGATCATCAT...TAACTTTCTGAGACAGAGTCTCACTGTGTAGCCCGTAGTGGCCTGGAGCTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
3UTR-3UTR CCA 90 bp ATGCTGGGTGTAGCATGTGTGGAAGGTTCAGGGGCCTCTAGCAAGGAGCAGATAATTTCTACTCGGAACTaGTTAACTCCAACCAGAAAT +
Preference number: 2 (lower is better)
Translates to: MLGVACVEGSGASSKEQIISTRN*LTPTRN
Trigger: ATTTCTGGTTGGAGTTAACCAGTTCCGAGTAGAAAT...TATCTGCTCCTTGCTAGAGGCCCCTGAACCTTCCACACATGCTACACCCAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
3UTR-3UTR CCA 90 bp TGGTGGTGCACTCTTTTAATCCTAACATTTGGGAGACAGAGGCAGGCGGATCTCCATGGCTCTTCATTTTaGAATTCGTTGTCACGTGGT +
Preference number: 2 (lower is better)
Translates to: WWCTLLILTFGRQRQADLHGSSF*NSLSRG
Trigger: ACCACGTGACAACGAATTCCAAAATGAAGAGCCATG...GAGATCCGCCTGCCTCTGTCTCCCAAATGTTAGGATTAAAAGAGTGCACCACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
3UTR-3UTR CCA 90 bp TTAGGTGTGGTGGTGCACTCTTTTAATCCTAACATTTGGGAGACAGAGGCAGGCGGTGGTGTGAAGGACTaGTTTTATTTTTCACCATTA +
Preference number: 2 (lower is better)
Translates to: LGVVVHSFNPNIWETEAGGGVKD*FYFSPL
Trigger: TAATGGTGAAAAATAAAACCAGTCCTTCACACCACC...GCCTGCCTCTGTCTCCCAAATGTTAGGATTAAAAGAGTGCACCACCACACCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
3UTR-3UTR TCA 90 bp ATGGGATCTCATATAACTCAGACTGGCTTTGAACTTAATTATGTAGCAGAGGGTCCATGTTACAAATGCTaGAGTGTGAGGCACATGATA +
Preference number: 2 (lower is better)
Translates to: MGSHITQTGFELNYVAEGPCYKC*SVRHMI
Trigger: TATCATGTGCCTCACACTTCAGCATTTGTAACATGG...ACCCTCTGCTACATAATTAAGTTCAAAGCCAGTCTGAGTTATATGAGATCCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
3UTR-3UTR CCA 90 bp CTAAAGCGTGTTTTATGTGTACTCCAAACCCAATCATCCAGTCTGAAACACGTAATTTCTACTCGGAACTaGTTAACTCCAACCAGAAAT +
Preference number: 2 (lower is better)
Translates to: LKRVLCVLQTQSSSLKHVISTRN*LTPTRN
Trigger: ATTTCTGGTTGGAGTTAACCAGTTCCGAGTAGAAAT...TACGTGTTTCAGACTGGATGATTGGGTTTGGAGTACACATAAAACACGCTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR GCA 72 bp CACGTACGGCCAACATCAGCCTGTTCAAGCCTTGATTaGGGTTCGGACCCCCGGCCACTCCTTCCTCCAGCC +
Preference number: 3 (lower is better)
Translates to: HVRPTSACSSLD*GSDPRPLLPPA
Trigger: GGCTGGAGGAAGGAGTGGCCGGGGGTCCGAACCGCAATCAAGGCTTGAACAGGCTGATGTTGGCCGTACGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR TCA 72 bp ATGTCACGTACGGCCAACATCAGCCTGTTCAAGCCTTaGTTGCGGTTCGGACCCCCGGCCACTCCTTCCTCC +
Preference number: 3 (lower is better)
Translates to: MSRTANISLFKP*LRFGPPATPSS
Trigger: GGAGGAAGGAGTGGCCGGGGGTCCGAACCGCAATCAAGGCTTGAACAGGCTGATGTTGGCCGTACGTGACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR GCA 72 bp AACAAGTCAGCCCTCAATATTCTGCTGAAGGGGCAGTaGTCTGGGCCCCTGCTCAGTCACATCCAGGGCCCC +
Preference number: 3 (lower is better)
Translates to: NKSALNILLKGQ*SGPLLSHIQGP
Trigger: GGGGCCCTGGATGTGACTGAGCAGGGGCCCAGAGCACTGCCCCTTCAGCAGAATATTGAGGGCTGACTTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR CCA 72 bp CCGGCCTTGCCTGGCTATGGTCTTTGTTCCTGCCACTaGACTCGGGTTCTTGGTCAGGGTTCCCCACTCATC +
Preference number: 3 (lower is better)
Translates to: PALPGYGLCSCH*TRVLGQGSPLI
Trigger: GATGAGTGGGGAACCCTGACCAAGAACCCGAGTCCAGTGGCAGGAACAAAGACCATAGCCAGGCAAGGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR-3UTR CAA 90 bp CCCTCAGGATTGTCCTCCCGAGGCACCTCCAGGTCGTTGAAGTGGAAGTTGGCCCTTGCCCATGTTAACTaGGGAGGGGAAAGACCAGCG +
Preference number: 3 (lower is better)
Translates to: PSGLSSRGTSRSLKWKLALAHVN*GGERPA
Trigger: CGCTGGTCTTTCCCCTCCCAAGTTAACATGGGCAAG...GGCCAACTTCCACTTCAACGACCTGGAGGTGCCTCGGGAGGACAATCCTGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR-3UTR CAA 90 bp GCCTGCAGGTGGGACGTTCCTGAAGGCCTGGGGTATCCTCTGCTTCACTGTTCCTTCGTTGTCACGTGGTaGCAGAATAGCTGCTGCAGC +
Preference number: 3 (lower is better)
Translates to: ACRWDVPEGLGYPLLHCSFVVTW*QNSCCS
Trigger: GCTGCAGCAGCTATTCTGCAACCACGTGACAACGAA...GGAACAGTGAAGCAGAGGATACCCCAGGCCTTCAGGAACGTCCCACCTGCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
ENSMUST00000212880.2
3UTR-3UTR CAA 90 bp CTCTCAGGAAACAGGCCTGCAGGTGGGACGTTCCTGAAGGCCTGGGGTATCCTCTTCGTTGTCACGTGGTaGCAGAATAGCTGCTGCAGC +
Preference number: 3 (lower is better)
Translates to: LSGNRPAGGTFLKAWGILFVVTW*QNSCCS
Trigger: GCTGCAGCAGCTATTCTGCAACCACGTGACAACGAA...GAGGATACCCCAGGCCTTCAGGAACGTCCCACCTGCAGGCCTGTTTCCTGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
ENSMUST00000212880.2
3UTR TCA 72 bp GCCTCTCAGGAAACAGGCCTGCAGGTGGGACGTTCCTaGAGGCCTGGGGTATCCTCTGCTTCACTGTTCCTA +
Preference number: 3 (lower is better)
Translates to: ASQETGLQVGRS*RPGVSSASLFL
Trigger: TAGGAACAGTGAAGCAGAGGATACCCCAGGCCTTCAGGAACGTCCCACCTGCAGGCCTGTTTCCTGAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
ENSMUST00000212880.2
3UTR TCA 72 bp CCTCAGGATTGTCCTCCCGAGGCACCTCCAGGTCGTTaGAGTGGAAGTTGGCCATCATGTCACGTACGGCCA +
Preference number: 3 (lower is better)
Translates to: PQDCPPEAPPGR*SGSWPSCHVRP
Trigger: TGGCCGTACGTGACATGATGGCCAACTTCCACTTCAACGACCTGGAGGTGCCTCGGGAGGACAATCCTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR GCA 72 bp GGCCCCAAGATTGAGCCTGTCCCCTCCCAAAGTCCCTaGCCAGAAGAAGAAGCAGCTGCTCTAGAAAGCCAG +
Preference number: 3 (lower is better)
Translates to: GPKIEPVPSQSP*PEEEAAALESQ
Trigger: CTGGCTTTCTAGAGCAGCTGCTTCTTCTTCTGGGCAGGGACTTTGGGAGGGGACAGGCTCAATCTTGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR CCA 72 bp GGTTCAGGGGCCTCTAGCAAGGAGCAGATAGGGTCCTaGTACTGCAGACCCTGGGACAACCCTTCTATGCAC +
Preference number: 3 (lower is better)
Translates to: GSGASSKEQIGS*YCRPWDNPSMH
Trigger: GTGCATAGAAGGGTTGTCCCAGGGTCTGCAGTACCAGGACCCTATCTGCTCCTTGCTAGAGGCCCCTGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
3UTR CCA 72 bp GGAAACAGGCCTGCAGGTGGGACGTTCCTGAAGGCCTaGGGTATCCTCTGCTTCACTGTTCCTAGAGCATGG +
Preference number: 3 (lower is better)
Translates to: GNRPAGGTFLKA*GILCFTVPRAW
Trigger: CCATGCTCTAGGAACAGTGAAGCAGAGGATACCCCAGGCCTTCAGGAACGTCCCACCTGCAGGCCTGTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
ENSMUST00000212880.2
3UTR TCA 72 bp ACCCAGTGTGGGGCGCACTGCTTCTGGGACTGTTTCTaGGGACACTGGAGGAAGCTCACCCAGAGTATAACC +
Preference number: 3 (lower is better)
Translates to: TQCGAHCFWDCF*GHWRKLTQSIT
Trigger: GGTTATACTCTGGGTGAGCTTCCTCCAGTGTCCTCAGAAACAGTCCCAGAAGCAGTGCGCCCCACACTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
3UTR TCA 72 bp TTCCAGCCCTTCCAGTTTCCTCTAAGGTTCCCAGGCTaGGACTGTCAGTCAGCAGCAGACCATGTGCCAGGC +
Preference number: 3 (lower is better)
Translates to: FQPFQFPLRFPG*DCQSAADHVPG
Trigger: GCCTGGCACATGGTCTGCTGCTGACTGACAGTCTCAGCCTGGGAACCTTAGAGGAAACTGGAAGGGCTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
3UTR TCA 72 bp TGGGATGCAAACCGTCAGTGCTGCCTGGGAGACACCTaGCACAGCTGTAACACCTCAGCAGCCTGGAGCTTT +
Preference number: 3 (lower is better)
Translates to: WDANRQCCLGDT*HSCNTSAAWSF
Trigger: AAAGCTCCAGGCTGCTGAGGTGTTACAGCTGTGTCAGGTGTCTCCCAGGCAGCACTGACGGTTTGCATCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR GCA 72 bp GGGGCCTCTAGCAAGGAGCAGATAGGGTCCTGGTACTaGAGACCCTGGGACAACCCTTCTATGCACCATGTT +
Preference number: 3 (lower is better)
Translates to: GASSKEQIGSWY*RPWDNPSMHHV
Trigger: AACATGGTGCATAGAAGGGTTGTCCCAGGGTCTGCAGTACCAGGACCCTATCTGCTCCTTGCTAGAGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
3UTR CCA 72 bp ACCAGAAATGAATTCGGGAACGTGACTGCACGGCTCTaGGCACAGCATCTGGACAGTTCAGTCCCAGTCCCC +
Preference number: 3 (lower is better)
Translates to: TRNEFGNVTARL*AQHLDSSVPVP
Trigger: GGGGACTGGGACTGAACTGTCCAGATGCTGTGCCCAGAGCCGTGCAGTCACGTTCCCGAATTCATTTCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR CCA 72 bp GCTAGGCTTTGTGGGATGCAAACCGTCAGTGCTGCCTaGGAGACACCTGACACAGCTGTAACACCTCAGCAG +
Preference number: 3 (lower is better)
Translates to: ARLCGMQTVSAA*ETPDTAVTPQQ
Trigger: CTGCTGAGGTGTTACAGCTGTGTCAGGTGTCTCCCAGGCAGCACTGACGGTTTGCATCCCACAAAGCCTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR-3UTR CAA 90 bp CTGCTGCAGCTCCAGATGTCACATCCTCATCCGGATGGACTTACAGCTGCTGAAGGCACCTCCAGGTCGTaGAAGTGGAAGTTGGCCATC +
Preference number: 3 (lower is better)
Translates to: LLQLQMSHPHPDGLTAAEGTSRS*KWKLAI
Trigger: GATGGCCAACTTCCACTTCAACGACCTGGAGGTGCC...TTCAGCAGCTGTAAGTCCATCCGGATGAGGATGTGACATCTGGAGCTGCAGCAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR CCA 72 bp CAAACAGCTTATGAGACACAGACCTCCGGCCTTGCCTaGCTATGGTCTTTGTTCCTGCCACTGGACTCGGGT +
Preference number: 3 (lower is better)
Translates to: QTAYETQTSGLA*LWSLFLPLDSG
Trigger: ACCCGAGTCCAGTGGCAGGAACAAAGACCATAGCCAGGCAAGGCCGGAGGTCTGTGTCTCATAAGCTGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR TCA 72 bp GATGTCACATCCTCATCCGGATGGACTTACAGCTGCTaGAAGGAAGAGGCAGGATGCCAGGTTTTCCGCGCT +
Preference number: 3 (lower is better)
Translates to: DVTSSSGWTYSC*KEEAGCQVFRA
Trigger: AGCGCGGAAAACCTGGCATCCTGCCTCTTCCTTTCAGCAGCTGTAAGTCCATCCGGATGAGGATGTGACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR-3UTR CAA 90 bp AATGACCAACAATTCTGCACAGAACACATAGGCAGGCGCCTCTTGGGAAAGGGGTTCGTTGTCACGTGGTaGCAGAATAGCTGCTGCAGC +
Preference number: 3 (lower is better)
Translates to: NDQQFCTEHIGRRLLGKGFVVTW*QNSCCS
Trigger: GCTGCAGCAGCTATTCTGCAACCACGTGACAACGAA...CCCCTTTCCCAAGAGGCGCCTGCCTATGTGTTCTGTGCAGAATTGTTGGTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
3UTR-3UTR CAA 90 bp AACACTTCTGAAGCCGATCATCTGATGGCCTCTCAGGAAACAGGCCTGCAGGTGGCATGGCTCTTCATTTaGGAATTCGTTGTCACGTGG +
Preference number: 3 (lower is better)
Translates to: NTSEADHLMASQETGLQVAWLFI*EFVVTW
Trigger: CCACGTGACAACGAATTCCAAAATGAAGAGCCATGC...CACCTGCAGGCCTGTTTCCTGAGAGGCCATCAGATGATCGGCTTCAGAAGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
ENSMUST00000212880.2
3UTR-3UTR CAA 90 bp AATGACCAACAATTCTGCACAGAACACATAGGCAGGCGCCTCTTGGGAAAGGGGTCGTTGAAGTGGAAGTaGGCCATCATGTCACGTACG +
Preference number: 3 (lower is better)
Translates to: NDQQFCTEHIGRRLLGKGSLKWK*AIMSRT
Trigger: CGTACGTGACATGATGGCCAACTTCCACTTCAACGA...CCCCTTTCCCAAGAGGCGCCTGCCTATGTGTTCTGTGCAGAATTGTTGGTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR CCA 72 bp AGCAAGGAGCAGATAGGGTCCTGGTACTGCAGACCCTaGGACAACCCTTCTATGCACCATGTTACAAATGCT +
Preference number: 3 (lower is better)
Translates to: SKEQIGSWYCRP*DNPSMHHVTNA
Trigger: AGCATTTGTAACATGGTGCATAGAAGGGTTGTCCCAGGGTCTGCAGTACCAGGACCCTATCTGCTCCTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
3UTR-3UTR CAA 90 bp CTGCTGCAGCTCCAGATGTCACATCCTCATCCGGATGGACTTACAGCTGCTGAAGTTTTCCGCGCTTGCTaGTCATTTCCACAACATACA +
Preference number: 3 (lower is better)
Translates to: LLQLQMSHPHPDGLTAAEVFRAC*SFPQHT
Trigger: TGTATGTTGTGGAAATGACAAGCAAGCGCGGAAAAC...TTCAGCAGCTGTAAGTCCATCCGGATGAGGATGTGACATCTGGAGCTGCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR TCA 72 bp ACCCACTCCCTTCAGAGGGAAAACAAAAGACACGGGTaGTGGCATGGTCAGCATTTCTACTCGGAACTGGTT +
Preference number: 3 (lower is better)
Translates to: THSLQRENKRHG*WHGQHFYSELV
Trigger: AACCAGTTCCGAGTAGAAATGCTGACCATGCCATCACCCGTGTCTTTTGTTTTCCCTCTGAAGGGAGTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
3UTR GCA 72 bp GTGTGCTTTAAGTTCACAGCCTGGGCCTCTGCACAGTaGTTTAACCCCAAACTGTCCCTTTTCCATTTCCTG +
Preference number: 3 (lower is better)
Translates to: VCFKFTAWASAQ*FNPKLSLFHFL
Trigger: CAGGAAATGGAAAAGGGACAGTTTGGGGTTAAAGCACTGTGCAGAGGCCCAGGCTGTGAACTTAAAGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR-3UTR CAA 90 bp GTGAGACTCTGTCTCAGAAAGTTACTTTTCCCGATGATGATCCACAGGTGGTGTTTCGTTGTCACGTGGTaGCAGAATAGCTGCTGCAGC +
Preference number: 3 (lower is better)
Translates to: VRLCLRKLLFPMMIHRWCFVVTW*QNSCCS
Trigger: GCTGCAGCAGCTATTCTGCAACCACGTGACAACGAA...ACACCACCTGTGGATCATCATCGGGAAAAGTAACTTTCTGAGACAGAGTCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
3UTR CCA 72 bp AGAGCATGGCTCTTCATTTTGGAATTCGTTGTCACGTaGTTGCAGAATAGCTGCTGCAGCTCCAGATGTCAC +
Preference number: 3 (lower is better)
Translates to: RAWLFILEFVVT*LQNSCCSSRCH
Trigger: GTGACATCTGGAGCTGCAGCAGCTATTCTGCAACCACGTGACAACGAATTCCAAAATGAAGAGCCATGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
ENSMUST00000212880.2
3UTR-3UTR CAA 90 bp TTTGAGATGGGATCTCATATAACTCAGACTGGCTTTGAACTTAATTATGTAGCAATAGGCAGGCGCCTCTaGGGAAAGGGGCCAGGGAGG +
Preference number: 3 (lower is better)
Translates to: FEMGSHITQTGFELNYVAIGRRL*GKGPGR
Trigger: CCTCCCTGGCCCCTTTCCCAAGAGGCGCCTGCCTAT...TGCTACATAATTAAGTTCAAAGCCAGTCTGAGTTATATGAGATCCCATCTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR-3UTR CAA 90 bp CTAAAGCGTGTTTTATGTGTACTCCAAACCCAATCATCCAGTCTGAAACACGTACACAGACCTCCGGCCTaGCCTGGCTATGGTCTTTGT +
Preference number: 3 (lower is better)
Translates to: LKRVLCVLQTQSSSLKHVHRPPA*PGYGLC
Trigger: ACAAAGACCATAGCCAGGCAAGGCCGGAGGTCTGTG...TACGTGTTTCAGACTGGATGATTGGGTTTGGAGTACACATAAAACACGCTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR GCA 72 bp GGTGACAGGCCAGACTTTAAAGCTGTTGAGATGACATaGAGGTTAGGTGTGGTGGTGCACTCTTTTAATCCT +
Preference number: 3 (lower is better)
Translates to: GDRPDFKAVEMT*RLGVVVHSFNP
Trigger: AGGATTAAAAGAGTGCACCACCACACCTAACCTGCATGTCATCTCAACAGCTTTAAAGTCTGGCCTGTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
3UTR CCA 72 bp TCTGCTTCACTGTTCCTAGAGCATGGCTCTTCATTTTaGAATTCGTTGTCACGTGGTTGCAGAATAGCTGCT +
Preference number: 3 (lower is better)
Translates to: SASLFLEHGSSF*NSLSRGCRIAA
Trigger: AGCAGCTATTCTGCAACCACGTGACAACGAATTCCAAAATGAAGAGCCATGCTCTAGGAACAGTGAAGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
ENSMUST00000212880.2
3UTR TCA 72 bp CTGAGAGGCAGCAAACAGGTTTTCTCCCTGACTACATaGAAATGCACAAATGACCAACAATTCTGCACAGAA +
Preference number: 3 (lower is better)
Translates to: LRGSKQVFSLTT*KCTNDQQFCTE
Trigger: TTCTGTGCAGAATTGTTGGTCATTTGTGCATTTTCATGTAGTCAGGGAGAAAACCTGTTTGCTGCCTCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR GCA 90 bp GGAAAGGGGCCAGGGAGGTACGGGAGGAGCGGGACACACTGTCACCCCTACCTGGACTCCTTCCTTCCCTaGACCCCCGGGGCGCCGGCC +
Preference number: 4 (lower is better)
Translates to: GKGPGRYGRSGTHCHPYLDSFLP*TPGAPA
Trigger: GGCCGGCGCCCCGGGGGTGCAGGGAAGGAAGGAGTC...CAGGTAGGGGTGACAGTGTGTCCCGCTCCTCCCGTACCTCCCTGGCCCCTTTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR GCA 90 bp CAGGCGGATCTCCGAGGCCAGCCTGGTCTACAGAGTAAAGGGCGGCCTGGTCTAGACTCCTTCCTTCCCTaGACCCCCGGGGCGCCGGCC +
Preference number: 4 (lower is better)
Translates to: QADLRGQPGLQSKGRPGLDSFLP*TPGAPA
Trigger: GGCCGGCGCCCCGGGGGTGCAGGGAAGGAAGGAGTC...TAGACCAGGCCGCCCTTTACTCTGTAGACCAGGCTGGCCTCGGAGATCCGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CCA 90 bp CACATAGGCAGGCGCCTCTTGGGAAAGGGGCCAGGGAGGTACGGGAGGAGCGGGAGTATCACGTGGCGGTaGATGTTTCTGGGCGCACGC +
Preference number: 4 (lower is better)
Translates to: HIGRRLLGKGPGRYGRSGSITWR*MFLGAR
Trigger: GCGTGCGCCCAGAAACATCCACCGCCACGTGATACT...CCCGCTCCTCCCGTACCTCCCTGGCCCCTTTCCCAAGAGGCGCCTGCCTATGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR TCA 90 bp TTCTGCACAGAACACATAGGCAGGCGCCTCTTGGGAAAGGGGCCAGGGAGGTACGGGGGCCGGGGTGGCTaGACCCACTGCTGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: FCTEHIGRRLLGKGPGRYGGRGG*THCCPQ
Trigger: TTGAGGACAGCAGTGGGTTCAGCCACCCCGGCCCCC...GTACCTCCCTGGCCCCTTTCCCAAGAGGCGCCTGCCTATGTGTTCTGTGCAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR GCA 90 bp CACATAGGCAGGCGCCTCTTGGGAAAGGGGCCAGGGAGGTACGGGAGGAGCGGGTTGATAGACCTGGTTTaGTGTACCGGGGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: HIGRRLLGKGPGRYGRSGLIDLV*CTGARC
Trigger: GCACCTGGCCCCGGTACAGCAAACCAGGTCTATCAA...CCCGCTCCTCCCGTACCTCCCTGGCCCCTTTCCCAAGAGGCGCCTGCCTATGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR GCA 90 bp GGGAAAGGGGCCAGGGAGGTACGGGAGGAGCGGGACACACTGTCACCCCTACCTAGGAGGGAAGCCTGTTaGCTGGCAGAGCTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: GKGAREVREERDTLSPLPRREAC*LAELSS
Trigger: TGAGCTCAGCTCTGCCAGGCAACAGGCTTCCCTCCT...AGGTAGGGGTGACAGTGTGTCCCGCTCCTCCCGTACCTCCCTGGCCCCTTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR GCA 90 bp CGCCTCTTGGGAAAGGGGCCAGGGAGGTACGGGAGGAGCGGGACACACTGTCACAGGAGGGAAGCCTGTTaGCTGGCAGAGCTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: RLLGKGPGRYGRSGTHCHRREAC*LAELSS
Trigger: TGAGCTCAGCTCTGCCAGGCAACAGGCTTCCCTCCT...GTGACAGTGTGTCCCGCTCCTCCCGTACCTCCCTGGCCCCTTTCCCAAGAGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CCA 90 bp GGGAAAGGGGCCAGGGAGGTACGGGAGGAGCGGGACACACTGTCACCCCTACCTAGTATCACGTGGCGGTaGATGTTTCTGGGCGCACGC +
Preference number: 4 (lower is better)
Translates to: GKGAREVREERDTLSPLPSITWR*MFLGAR
Trigger: GCGTGCGCCCAGAAACATCCACCGCCACGTGATACT...AGGTAGGGGTGACAGTGTGTCCCGCTCCTCCCGTACCTCCCTGGCCCCTTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR TCA 90 bp GGGAAAGGGGCCAGGGAGGTACGGGAGGAGCGGGACACACTGTCACCCCTACCTGTTGCCTGGCAGAGCTaGGCTCATGCTCAGGTAAGT +
Preference number: 4 (lower is better)
Translates to: GKGAREVREERDTLSPLPVAWQS*AHAQVS
Trigger: ACTTACCTGAGCATGAGCTCAGCTCTGCCAGGCAAC...AGGTAGGGGTGACAGTGTGTCCCGCTCCTCCCGTACCTCCCTGGCCCCTTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR GCA 90 bp CTGGGACTGTTTCTGAGGACACTGGAGGAAGCTCACCCAGAGTATAACCCACTCGACTCCTTCCTTCCCTaGACCCCCGGGGCGCCGGCC +
Preference number: 4 (lower is better)
Translates to: LGLFLRTLEEAHPEYNPLDSFLP*TPGAPA
Trigger: GGCCGGCGCCCCGGGGGTGCAGGGAAGGAAGGAGTC...GAGTGGGTTATACTCTGGGTGAGCTTCCTCCAGTGTCCTCAGAAACAGTCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR GCA 90 bp CACATAGGCAGGCGCCTCTTGGGAAAGGGGCCAGGGAGGTACGGGAGGAGCGGGAGGGAACATGGTGAGTaGCTGCTGTATCAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: HIGRRLLGKGPGRYGRSGREHGE*LLYQEG
Trigger: TCCCTCCTGATACAGCAGGCACTCACCATGTTCCCT...CCCGCTCCTCCCGTACCTCCCTGGCCCCTTTCCCAAGAGGCGCCTGCCTATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CCA 90 bp GGAAAGGGGCCAGGGAGGTACGGGAGGAGCGGGACACACTGTCACCCCTACCTGGTTTCCGTGGCTGACTaGACTCAGCCTCTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: GKGPGRYGRSGTHCHPYLVSVAD*TQPLWS
Trigger: AGACCAGAGAGGCTGAGTCCAGTCAGCCACGGAAAC...CAGGTAGGGGTGACAGTGTGTCCCGCTCCTCCCGTACCTCCCTGGCCCCTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
3UTR CAA 72 bp TGGACAGTTCAGTCCCAGTCCCCCTCGCCCTCAGGATaGTCCTCCCGAGGCACCTCCAGGTCGTTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: WTVQSQSPSPSG*SSRGTSRSLKW
Trigger: CCACTTCAACGACCTGGAGGTGCCTCGGGAGGACAATCCTGAGGGCGAGGGGGACTGGGACTGAACTGTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
CDS-3UTR TCA 90 bp TTGCCTGGCTATGGTCTTTGTTCCTGCCACTGGACTCGGGTTCTTGGTCAGGGTGGGGGCCGGGGTGGCTaGACCCACTGCTGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: LPGYGLCSCHWTRVLGQGGGRGG*THCCPQ
Trigger: TTGAGGACAGCAGTGGGTTCAGCCACCCCGGCCCCC...ACCCTGACCAAGAACCCGAGTCCAGTGGCAGGAACAAAGACCATAGCCAGGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
CDS-3UTR TCA 90 bp CAGGCGGATCTCCGAGGCCAGCCTGGTCTACAGAGTAAAGGGCGGCCTGGTCTAGCTCAAGGCTCAGGATaGGCTTGCAGTACTCCAGCG +
Preference number: 4 (lower is better)
Translates to: QADLRGQPGLQSKGRPGLAQGSG*ACSTPA
Trigger: CGCTGGAGTACTGCAAGCTCATCCTGAGCCTTGAGC...TAGACCAGGCCGCCCTTTACTCTGTAGACCAGGCTGGCCTCGGAGATCCGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR GCA 90 bp CGCCTCTTGGGAAAGGGGCCAGGGAGGTACGGGAGGAGCGGGACACACTGTCACAACATGGTGAGTGCCTaGTGTATCAGGAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: RLLGKGPGRYGRSGTHCHNMVSA*CIRREA
Trigger: GGCTTCCCTCCTGATACAGCAGGCACTCACCATGTT...GTGACAGTGTGTCCCGCTCCTCCCGTACCTCCCTGGCCCCTTTCCCAAGAGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR GCA 90 bp GGAAAGGGGCCAGGGAGGTACGGGAGGAGCGGGACACACTGTCACCCCTACCTGAACATGGTGAGTGCCTaGTGTATCAGGAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: GKGPGRYGRSGTHCHPYLNMVSA*CIRREA
Trigger: GGCTTCCCTCCTGATACAGCAGGCACTCACCATGTT...CAGGTAGGGGTGACAGTGTGTCCCGCTCCTCCCGTACCTCCCTGGCCCCTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CCA 90 bp CAGGCGGATCTCCGAGGCCAGCCTGGTCTACAGAGTAAAGGGCGGCCTGGTCTAGGCGGTGGATGTTTCTaGGCGCACGCTGGTACAACA +
Preference number: 4 (lower is better)
Translates to: QADLRGQPGLQSKGRPGLGGGCF*AHAGTT
Trigger: TGTTGTACCAGCGTGCGCCCAGAAACATCCACCGCC...TAGACCAGGCCGCCCTTTACTCTGTAGACCAGGCTGGCCTCGGAGATCCGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR TCA 90 bp GTGGAAGGTTCAGGGGCCTCTAGCAAGGAGCAGATAGGGTCCTGGTACTGCAGAAGCGGCAGGCATCACTaGGCTGCAGCAGGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: VEGSGASSKEQIGSWYCRSGRHH*AAAGSP
Trigger: TGGACTCCCTGCTGCAGCTCAGTGATGCCTGCCGCT...TCTGCAGTACCAGGACCCTATCTGCTCCTTGCTAGAGGCCCCTGAACCTTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR CCA 90 bp GGGAAAGGGGCCAGGGAGGTACGGGAGGAGCGGGACACACTGTCACCCCTACCTAAGAAAGGCCTTTCTTaGACTCCAGCAGCCGCATTG +
Preference number: 4 (lower is better)
Translates to: GKGAREVREERDTLSPLPKKGLS*TPAAAL
Trigger: CAATGCGGCTGCTGGAGTCCAAGAAAGGCCTTTCTT...AGGTAGGGGTGACAGTGTGTCCCGCTCCTCCCGTACCTCCCTGGCCCCTTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CCA 90 bp GGGAAAGGGGCCAGGGAGGTACGGGAGGAGCGGGACACACTGTCACCCCTACCTTGTTATTTGGCTCCATaGACTCCACAGCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: GKGAREVREERDTLSPLPCYLAP*TPQPPG
Trigger: TCCTGGTGGCTGTGGAGTCCATGGAGCCAAATAACA...AGGTAGGGGTGACAGTGTGTCCCGCTCCTCCCGTACCTCCCTGGCCCCTTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CCA 90 bp TCAGGAAACAGGCCTGCAGGTGGGACGTTCCTGAAGGCCTGGGGTATCCTCTGCGGCGGTGGATGTTTCTaGGCGCACGCTGGTACAACA +
Preference number: 4 (lower is better)
Translates to: SGNRPAGGTFLKAWGILCGGGCF*AHAGTT
Trigger: TGTTGTACCAGCGTGCGCCCAGAAACATCCACCGCC...GCAGAGGATACCCCAGGCCTTCAGGAACGTCCCACCTGCAGGCCTGTTTCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
ENSMUST00000212880.2
CDS-3UTR CCA 90 bp CTCAGGAAACAGGCCTGCAGGTGGGACGTTCCTGAAGGCCTGGGGTATCCTCTGGGCGGTGGATGTTTCTaGGCGCACGCTGGTACAACA +
Preference number: 4 (lower is better)
Translates to: LRKQACRWDVPEGLGYPLGGGCF*AHAGTT
Trigger: TGTTGTACCAGCGTGCGCCCAGAAACATCCACCGCC...CAGAGGATACCCCAGGCCTTCAGGAACGTCCCACCTGCAGGCCTGTTTCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
ENSMUST00000212880.2
CDS-3UTR CCA 90 bp TCAGGAAACAGGCCTGCAGGTGGGACGTTCCTGAAGGCCTGGGGTATCCTCTGCAGTATCACGTGGCGGTaGATGTTTCTGGGCGCACGC +
Preference number: 4 (lower is better)
Translates to: SGNRPAGGTFLKAWGILCSITWR*MFLGAR
Trigger: GCGTGCGCCCAGAAACATCCACCGCCACGTGATACT...GCAGAGGATACCCCAGGCCTTCAGGAACGTCCCACCTGCAGGCCTGTTTCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
ENSMUST00000212880.2
3UTR CAA 72 bp CATGTCACGTACGGCCAACATCAGCCTGTTCAAGCCTaGATTGCGGTTCGGACCCCCGGCCACTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: HVTYGQHQPVQA*IAVRTPGHSFL
Trigger: GAGGAAGGAGTGGCCGGGGGTCCGAACCGCAATCAAGGCTTGAACAGGCTGATGTTGGCCGTACGTGACATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
3UTR CAA 72 bp CCCTCAGGATTGTCCTCCCGAGGCACCTCCAGGTCGTaGAAGTGGAAGTTGGCCATCATGTCACGTACGGCC +
Preference number: 4 (lower is better)
Translates to: PSGLSSRGTSRS*KWKLAIMSRTA
Trigger: GGCCGTACGTGACATGATGGCCAACTTCCACTTCAACGACCTGGAGGTGCCTCGGGAGGACAATCCTGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
CDS-3UTR TCA 90 bp AATGACCAACAATTCTGCACAGAACACATAGGCAGGCGCCTCTTGGGAAAGGGGGGGGGCCGGGGTGGCTaGACCCACTGCTGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: NDQQFCTEHIGRRLLGKGGGRGG*THCCPQ
Trigger: TTGAGGACAGCAGTGGGTTCAGCCACCCCGGCCCCC...CCCCTTTCCCAAGAGGCGCCTGCCTATGTGTTCTGTGCAGAATTGTTGGTCATT
59% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR TCA 90 bp GCCTGCAGGTGGGACGTTCCTGAAGGCCTGGGGTATCCTCTGCTTCACTGTTCCGTTGCCTGGCAGAGCTaGGCTCATGCTCAGGTAAGT +
Preference number: 4 (lower is better)
Translates to: ACRWDVPEGLGYPLLHCSVAWQS*AHAQVS
Trigger: ACTTACCTGAGCATGAGCTCAGCTCTGCCAGGCAAC...GGAACAGTGAAGCAGAGGATACCCCAGGCCTTCAGGAACGTCCCACCTGCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR GCA 90 bp AGACAGAGGCAGGCGGATCTCCGAGGCCAGCCTGGTCTACAGAGTAAAGGGCGGTGGTCCCTCTTCCTCTaGGTCATCGTCATCAAGGAG +
Preference number: 4 (lower is better)
Translates to: RQRQADLRGQPGLQSKGRWSLFL*VIVIKE
Trigger: CTCCTTGATGACGATGACGCAGAGGAAGAGGGACCA...CCGCCCTTTACTCTGTAGACCAGGCTGGCCTCGGAGATCCGCCTGCCTCTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR GCA 90 bp GGAAAGGGGCCAGGGAGGTACGGGAGGAGCGGGACACACTGTCACCCCTACCTGTCCTATTCTCAGGTCTaGGATAATCCAGCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: GKGPGRYGRSGTHCHPYLSYSQV*DNPACK
Trigger: CTTGCAGGCTGGATTATCGCAGACCTGAGAATAGGA...CAGGTAGGGGTGACAGTGTGTCCCGCTCCTCCCGTACCTCCCTGGCCCCTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR GCA 90 bp TTCTGCACAGAACACATAGGCAGGCGCCTCTTGGGAAAGGGGCCAGGGAGGTACAGGAGGGAAGCCTGTTaGCTGGCAGAGCTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: FCTEHIGRRLLGKGPGRYRREAC*LAELSS
Trigger: TGAGCTCAGCTCTGCCAGGCAACAGGCTTCCCTCCT...GTACCTCCCTGGCCCCTTTCCCAAGAGGCGCCTGCCTATGTGTTCTGTGCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CCA 90 bp TCAGGAAACAGGCCTGCAGGTGGGACGTTCCTGAAGGCCTGGGGTATCCTCTGCGTTTCCGTGGCTGACTaGACTCAGCCTCTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: SGNRPAGGTFLKAWGILCVSVAD*TQPLWS
Trigger: AGACCAGAGAGGCTGAGTCCAGTCAGCCACGGAAAC...GCAGAGGATACCCCAGGCCTTCAGGAACGTCCCACCTGCAGGCCTGTTTCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
ENSMUST00000212880.2
CDS-3UTR CCA 90 bp GCCTGCAGGTGGGACGTTCCTGAAGGCCTGGGGTATCCTCTGCTTCACTGTTCCGTTTCCGTGGCTGACTaGACTCAGCCTCTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: ACRWDVPEGLGYPLLHCSVSVAD*TQPLWS
Trigger: AGACCAGAGAGGCTGAGTCCAGTCAGCCACGGAAAC...GGAACAGTGAAGCAGAGGATACCCCAGGCCTTCAGGAACGTCCCACCTGCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
ENSMUST00000212880.2
CDS-3UTR TCA 90 bp AACACTTCTGAAGCCGATCATCTGATGGCCTCTCAGGAAACAGGCCTGCAGGTGAGCGGCAGGCATCACTaGGCTGCAGCAGGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: NTSEADHLMASQETGLQVSGRHH*AAAGSP
Trigger: TGGACTCCCTGCTGCAGCTCAGTGATGCCTGCCGCT...CACCTGCAGGCCTGTTTCCTGAGAGGCCATCAGATGATCGGCTTCAGAAGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR TCA 90 bp CATAGCAAGCTCCAGGCCACTACGGGCTACACAGTGAGACTCTGTCTCAGAAAGAGCGGCAGGCATCACTaGGCTGCAGCAGGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: HSKLQATTGYTVRLCLRKSGRHH*AAAGSP
Trigger: TGGACTCCCTGCTGCAGCTCAGTGATGCCTGCCGCT...CTTTCTGAGACAGAGTCTCACTGTGTAGCCCGTAGTGGCCTGGAGCTTGCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR TCA 90 bp GCATGTGTGGAAGGTTCAGGGGCCTCTAGCAAGGAGCAGATAGGGTCCTGGTACGCTCAAGGCTCAGGATaGGCTTGCAGTACTCCAGCG +
Preference number: 4 (lower is better)
Translates to: ACVEGSGASSKEQIGSWYAQGSG*ACSTPA
Trigger: CGCTGGAGTACTGCAAGCTCATCCTGAGCCTTGAGC...GTACCAGGACCCTATCTGCTCCTTGCTAGAGGCCCCTGAACCTTCCACACATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR TCA 90 bp CTCACCCGTTTCTGCCTCCACCCTGAGCAGGACTTGCCCATGTTAACTTGGGAGGCTCAAGGCTCAGGATaGGCTTGCAGTACTCCAGCG +
Preference number: 4 (lower is better)
Translates to: LTRFCLHPEQDLPMLTWEAQGSG*ACSTPA
Trigger: CGCTGGAGTACTGCAAGCTCATCCTGAGCCTTGAGC...CTCCCAAGTTAACATGGGCAAGTCCTGCTCAGGGTGGAGGCAGAAACGGGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
CDS-3UTR TCA 90 bp GAGGACAAGCTACAGGAGCGAGCTCTCACTGTGCAGCACATGAGTCCTGGGGACGTTGCCTGGCAGAGCTaGGCTCATGCTCAGGTAAGT +
Preference number: 4 (lower is better)
Translates to: EDKLQERALTVQHMSPGDVAWQS*AHAQVS
Trigger: ACTTACCTGAGCATGAGCTCAGCTCTGCCAGGCAAC...GTCCCCAGGACTCATGTGCTGCACAGTGAGAGCTCGCTCCTGTAGCTTGTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
CDS-3UTR GCA 90 bp TGCAGGTTAGGTGTGGTGGTGCACTCTTTTAATCCTAACATTTGGGAGACAGAGGACTCCTTCCTTCCCTaGACCCCCGGGGCGCCGGCC +
Preference number: 4 (lower is better)
Translates to: CRLGVVVHSFNPNIWETEDSFLP*TPGAPA
Trigger: GGCCGGCGCCCCGGGGGTGCAGGGAAGGAAGGAGTC...CTCTGTCTCCCAAATGTTAGGATTAAAAGAGTGCACCACCACACCTAACCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR GCA 90 bp TTCTGCACAGAACACATAGGCAGGCGCCTCTTGGGAAAGGGGCCAGGGAGGTACTTGATAGACCTGGTTTaGTGTACCGGGGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: FCTEHIGRRLLGKGPGRYLIDLV*CTGARC
Trigger: GCACCTGGCCCCGGTACAGCAAACCAGGTCTATCAA...GTACCTCCCTGGCCCCTTTCCCAAGAGGCGCCTGCCTATGTGTTCTGTGCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR GCA 90 bp CTCTCAGGAAACAGGCCTGCAGGTGGGACGTTCCTGAAGGCCTGGGGTATCCTCAGGGAACATGGTGAGTaGCTGCTGTATCAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: LSGNRPAGGTFLKAWGILREHGE*LLYQEG
Trigger: TCCCTCCTGATACAGCAGGCACTCACCATGTTCCCT...GAGGATACCCCAGGCCTTCAGGAACGTCCCACCTGCAGGCCTGTTTCCTGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
3UTR CAA 72 bp TCCTCCCGAGGCACCTCCAGGTCGTTGAAGTGGAAGTaGGCCATCATGTCACGTACGGCCAACATCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SSRGTSRSLKWK*AIMSRTANISL
Trigger: CAGGCTGATGTTGGCCGTACGTGACATGATGGCCAACTTCCACTTCAACGACCTGGAGGTGCCTCGGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
CDS-3UTR TCA 90 bp AATGACCAACAATTCTGCACAGAACACATAGGCAGGCGCCTCTTGGGAAAGGGGAGCGGCAGGCATCACTaGGCTGCAGCAGGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: NDQQFCTEHIGRRLLGKGSGRHH*AAAGSP
Trigger: TGGACTCCCTGCTGCAGCTCAGTGATGCCTGCCGCT...CCCCTTTCCCAAGAGGCGCCTGCCTATGTGTTCTGTGCAGAATTGTTGGTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR TCA 90 bp CAGGCGGATCTCCGAGGCCAGCCTGGTCTACAGAGTAAAGGGCGGCCTGGTCTAATAGGCCAGTGGAACTaGGAAGGCAAAATTTGGGAG +
Preference number: 4 (lower is better)
Translates to: QADLRGQPGLQSKGRPGLIGQWN*EGKIWE
Trigger: CTCCCAAATTTTGCCTTCTCAGTTCCACTGGCCTAT...TAGACCAGGCCGCCCTTTACTCTGTAGACCAGGCTGGCCTCGGAGATCCGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR TCA 90 bp GTGGAAGGTTCAGGGGCCTCTAGCAAGGAGCAGATAGGGTCCTGGTACTGCAGAGTTGCCTGGCAGAGCTaGGCTCATGCTCAGGTAAGT +
Preference number: 4 (lower is better)
Translates to: VEGSGASSKEQIGSWYCRVAWQS*AHAQVS
Trigger: ACTTACCTGAGCATGAGCTCAGCTCTGCCAGGCAAC...TCTGCAGTACCAGGACCCTATCTGCTCCTTGCTAGAGGCCCCTGAACCTTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR GCA 90 bp ATGACATGCAGGTTAGGTGTGGTGGTGCACTCTTTTAATCCTAACATTTGGGAGGACTCCTTCCTTCCCTaGACCCCCGGGGCGCCGGCC +
Preference number: 4 (lower is better)
Translates to: MTCRLGVVVHSFNPNIWEDSFLP*TPGAPA
Trigger: GGCCGGCGCCCCGGGGGTGCAGGGAAGGAAGGAGTC...CTCCCAAATGTTAGGATTAAAAGAGTGCACCACCACACCTAACCTGCATGTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR GCA 90 bp AGACAGAGGCAGGCGGATCTCCGAGGCCAGCCTGGTCTACAGAGTAAAGGGCGGTCGGAGTTTGCCACTTaGATTAGACTGTTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: RQRQADLRGQPGLQSKGRSEFAT*IRLFRG
Trigger: TCCTCGGAACAGTCTAATGCAAGTGGCAAACTCCGA...CCGCCCTTTACTCTGTAGACCAGGCTGGCCTCGGAGATCCGCCTGCCTCTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212571.2
CDS-3UTR GCA 90 bp CACATAGGCAGGCGCCTCTTGGGAAAGGGGCCAGGGAGGTACGGGAGGAGCGGGCCGAGGATTCTCCTGTaGAGCTTTTCTTATTTTTCT +
Preference number: 4 (lower is better)
Translates to: HIGRRLLGKGPGRYGRSGPRILL*SFSYFS
Trigger: AGAAAAATAAGAAAAGCTGCACAGGAGAATCCTCGG...CCCGCTCCTCCCGTACCTCCCTGGCCCCTTTCCCAAGAGGCGCCTGCCTATGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212571.2
CDS-3UTR GCA 90 bp TGTGTGGAAGGTTCAGGGGCCTCTAGCAAGGAGCAGATAGGGTCCTGGTACTGCTTGATAGACCTGGTTTaGTGTACCGGGGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: CVEGSGASSKEQIGSWYCLIDLV*CTGARC
Trigger: GCACCTGGCCCCGGTACAGCAAACCAGGTCTATCAA...GCAGTACCAGGACCCTATCTGCTCCTTGCTAGAGGCCCCTGAACCTTCCACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR GCA 90 bp CTCAGGAAACAGGCCTGCAGGTGGGACGTTCCTGAAGGCCTGGGGTATCCTCTGGAACAAGGGGTGGAATaGACACTCCATGCTGTACAG +
Preference number: 4 (lower is better)
Translates to: LRKQACRWDVPEGLGYPLEQGVE*TLHAVQ
Trigger: CTGTACAGCATGGAGTGTGCATTCCACCCCTTGTTC...CAGAGGATACCCCAGGCCTTCAGGAACGTCCCACCTGCAGGCCTGTTTCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR GCA 90 bp TCTAGCAAGGAGCAGATAGGGTCCTGGTACTGCAGACCCTGGGACAACCCTTCTAGGAGGGAAGCCTGTTaGCTGGCAGAGCTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: SSKEQIGSWYCRPWDNPSRREAC*LAELSS
Trigger: TGAGCTCAGCTCTGCCAGGCAACAGGCTTCCCTCCT...AGAAGGGTTGTCCCAGGGTCTGCAGTACCAGGACCCTATCTGCTCCTTGCTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR CCA 90 bp CTCAGGAAACAGGCCTGCAGGTGGGACGTTCCTGAAGGCCTGGGGTATCCTCTGAAGAAAGGCCTTTCTTaGACTCCAGCAGCCGCATTG +
Preference number: 4 (lower is better)
Translates to: LRKQACRWDVPEGLGYPLKKGLS*TPAAAL
Trigger: CAATGCGGCTGCTGGAGTCCAAGAAAGGCCTTTCTT...CAGAGGATACCCCAGGCCTTCAGGAACGTCCCACCTGCAGGCCTGTTTCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
3UTR CAA 72 bp GCTGAGATTACACACGAACACCAGCACCGCTGGCTTTaGCAGTGCATACTAAGGGAGCAGCTGCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: AEITHEHQHRWL*QCILREQLPSC
Trigger: GCAGCTGGGCAGCTGCTCCCTTAGTATGCACTGCAAAAGCCAGCGGTGCTGGTGTTCGTGTGTAATCTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR TCA 90 bp GCCTGCAGGTGGGACGTTCCTGAAGGCCTGGGGTATCCTCTGCTTCACTGTTCCATAGGCCAGTGGAACTaGGAAGGCAAAATTTGGGAG +
Preference number: 4 (lower is better)
Translates to: ACRWDVPEGLGYPLLHCSIGQWN*EGKIWE
Trigger: CTCCCAAATTTTGCCTTCTCAGTTCCACTGGCCTAT...GGAACAGTGAAGCAGAGGATACCCCAGGCCTTCAGGAACGTCCCACCTGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR GCA 90 bp CAGACCATGTGCCAGGCCCTGGGTTTGACCTCAGTGTTGCAAACATGCTGGGTGTGGTCCCTCTTCCTCTaGGTCATCGTCATCAAGGAG +
Preference number: 4 (lower is better)
Translates to: QTMCQALGLTSVLQTCWVWSLFL*VIVIKE
Trigger: CTCCTTGATGACGATGACGCAGAGGAAGAGGGACCA...CACCCAGCATGTTTGCAACACTGAGGTCAAACCCAGGGCCTGGCACATGGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR GCA 90 bp TCAGGAAACAGGCCTGCAGGTGGGACGTTCCTGAAGGCCTGGGGTATCCTCTGCTCGGAGTTTGCCACTTaGATTAGACTGTTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: SGNRPAGGTFLKAWGILCSEFAT*IRLFRG
Trigger: TCCTCGGAACAGTCTAATGCAAGTGGCAAACTCCGA...GCAGAGGATACCCCAGGCCTTCAGGAACGTCCCACCTGCAGGCCTGTTTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212571.2
CDS-3UTR GCA 90 bp TTCTGCACAGAACACATAGGCAGGCGCCTCTTGGGAAAGGGGCCAGGGAGGTACTCCACATATAGGACGTaGTTCCTGGAGCTCAGTGGA +
Preference number: 4 (lower is better)
Translates to: FCTEHIGRRLLGKGPGRYSTYRT*FLELSG
Trigger: TCCACTGAGCTCCAGGAAGCACGTCCTATATGTGGA...GTACCTCCCTGGCCCCTTTCCCAAGAGGCGCCTGCCTATGTGTTCTGTGCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR GCA 90 bp GCCTGCAGGTGGGACGTTCCTGAAGGCCTGGGGTATCCTCTGCTTCACTGTTCCGCCACCAGGAACTTGTaGTGTGCTTGTTGGTATTCT +
Preference number: 4 (lower is better)
Translates to: ACRWDVPEGLGYPLLHCSATRNL*CACWYS
Trigger: AGAATACCAACAAGCACAGCACAAGTTCCTGGTGGC...GGAACAGTGAAGCAGAGGATACCCCAGGCCTTCAGGAACGTCCCACCTGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR GCA 90 bp CCTCTCAGGAAACAGGCCTGCAGGTGGGACGTTCCTGAAGGCCTGGGGTATCCTTCCTATTCTCAGGTCTaGGATAATCCAGCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: PLRKQACRWDVPEGLGYPSYSQV*DNPACK
Trigger: CTTGCAGGCTGGATTATCGCAGACCTGAGAATAGGA...AGGATACCCCAGGCCTTCAGGAACGTCCCACCTGCAGGCCTGTTTCCTGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR GCA 90 bp CCATTCCTAGGCAGTCCTTCCTCCCCTTGGCTGAAACTCACCACAGGCCATTCCAACATGGTGAGTGCCTaGTGTATCAGGAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: PFLGSPSSPWLKLTTGHSNMVSA*CIRREA
Trigger: GGCTTCCCTCCTGATACAGCAGGCACTCACCATGTT...GGAATGGCCTGTGGTGAGTTTCAGCCAAGGGGAGGAAGGACTGCCTAGGAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
CDS-3UTR GCA 90 bp TGTGTGGAAGGTTCAGGGGCCTCTAGCAAGGAGCAGATAGGGTCCTGGTACTGCAGGGAACATGGTGAGTaGCTGCTGTATCAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: CVEGSGASSKEQIGSWYCREHGE*LLYQEG
Trigger: TCCCTCCTGATACAGCAGGCACTCACCATGTTCCCT...GCAGTACCAGGACCCTATCTGCTCCTTGCTAGAGGCCCCTGAACCTTCCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR CCA 90 bp CCTCTCAGGAAACAGGCCTGCAGGTGGGACGTTCCTGAAGGCCTGGGGTATCCTGCTTGCAGAACCTCATaGACATTTTCCTCTAGCCAG +
Preference number: 4 (lower is better)
Translates to: PLRKQACRWDVPEGLGYPACRTS*TFSSSQ
Trigger: CTGGCTAGAGGAAAATGTCCATGAGGTTCTGCAAGC...AGGATACCCCAGGCCTTCAGGAACGTCCCACCTGCAGGCCTGTTTCCTGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
ENSMUST00000212880.2
CDS-3UTR CCA 90 bp GGAAACAGGCCTGCAGGTGGGACGTTCCTGAAGGCCTGGGGTATCCTCTGCTTCGCTTGCAGAACCTCATaGACATTTTCCTCTAGCCAG +
Preference number: 4 (lower is better)
Translates to: GNRPAGGTFLKAWGILCFACRTS*TFSSSQ
Trigger: CTGGCTAGAGGAAAATGTCCATGAGGTTCTGCAAGC...GAAGCAGAGGATACCCCAGGCCTTCAGGAACGTCCCACCTGCAGGCCTGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
ENSMUST00000212880.2
CDS-3UTR CCA 90 bp CTGGGACTGTTTCTGAGGACACTGGAGGAAGCTCACCCAGAGTATAACCCACTCGGCGGTGGATGTTTCTaGGCGCACGCTGGTACAACA +
Preference number: 4 (lower is better)
Translates to: LGLFLRTLEEAHPEYNPLGGGCF*AHAGTT
Trigger: TGTTGTACCAGCGTGCGCCCAGAAACATCCACCGCC...GAGTGGGTTATACTCTGGGTGAGCTTCCTCCAGTGTCCTCAGAAACAGTCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR CCA 90 bp CATAGCAAGCTCCAGGCCACTACGGGCTACACAGTGAGACTCTGTCTCAGAAAGGGCGGTGGATGTTTCTaGGCGCACGCTGGTACAACA +
Preference number: 4 (lower is better)
Translates to: HSKLQATTGYTVRLCLRKGGGCF*AHAGTT
Trigger: TGTTGTACCAGCGTGCGCCCAGAAACATCCACCGCC...CTTTCTGAGACAGAGTCTCACTGTGTAGCCCGTAGTGGCCTGGAGCTTGCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CCA 90 bp CTGGGACTGTTTCTGAGGACACTGGAGGAAGCTCACCCAGAGTATAACCCACTCAGTATCACGTGGCGGTaGATGTTTCTGGGCGCACGC +
Preference number: 4 (lower is better)
Translates to: LGLFLRTLEEAHPEYNPLSITWR*MFLGAR
Trigger: GCGTGCGCCCAGAAACATCCACCGCCACGTGATACT...GAGTGGGTTATACTCTGGGTGAGCTTCCTCCAGTGTCCTCAGAAACAGTCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR CCA 90 bp GACCATGTGCCAGGCCCTGGGTTTGACCTCAGTGTTGCAAACATGCTGGGTGTAGTTTCCGTGGCTGACTaGACTCAGCCTCTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: DHVPGPGFDLSVANMLGVVSVAD*TQPLWS
Trigger: AGACCAGAGAGGCTGAGTCCAGTCAGCCACGGAAAC...TACACCCAGCATGTTTGCAACACTGAGGTCAAACCCAGGGCCTGGCACATGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR CCA 90 bp TGTGTGGAAGGTTCAGGGGCCTCTAGCAAGGAGCAGATAGGGTCCTGGTACTGCGCCTCTCCCCCTCTGTaGTGTAATTTGGCAACAAGG +
Preference number: 4 (lower is better)
Translates to: CVEGSGASSKEQIGSWYCASPPL*CNLATR
Trigger: CCTTGTTGCCAAATTACACCACAGAGGGGGAGAGGC...GCAGTACCAGGACCCTATCTGCTCCTTGCTAGAGGCCCCTGAACCTTCCACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057934.10
CDS-3UTR TCA 90 bp ATGACATGCAGGTTAGGTGTGGTGGTGCACTCTTTTAATCCTAACATTTGGGAGGGGGGCCGGGGTGGCTaGACCCACTGCTGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: MTCRLGVVVHSFNPNIWEGGRGG*THCCPQ
Trigger: TTGAGGACAGCAGTGGGTTCAGCCACCCCGGCCCCC...CTCCCAAATGTTAGGATTAAAAGAGTGCACCACCACACCTAACCTGCATGTCAT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR TCA 90 bp ATGCTGGGTGTAGCATGTGTGGAAGGTTCAGGGGCCTCTAGCAAGGAGCAGATAGCACCTCCAGGTCGTTaGAGTGGAAGTTGGCCATCA +
Preference number: 4 (lower is better)
Translates to: MLGVACVEGSGASSKEQIAPPGR*SGSWPS
Trigger: TGATGGCCAACTTCCACTTCAACGACCTGGAGGTGC...TATCTGCTCCTTGCTAGAGGCCCCTGAACCTTCCACACATGCTACACCCAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057934.10
CDS-3UTR GCA 90 bp TTCTGCACAGAACACATAGGCAGGCGCCTCTTGGGAAAGGGGCCAGGGAGGTACTCCTATTCTCAGGTCTaGGATAATCCAGCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: FCTEHIGRRLLGKGPGRYSYSQV*DNPACK
Trigger: CTTGCAGGCTGGATTATCGCAGACCTGAGAATAGGA...GTACCTCCCTGGCCCCTTTCCCAAGAGGCGCCTGCCTATGTGTTCTGTGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CCA 90 bp TGTGTGGAAGGTTCAGGGGCCTCTAGCAAGGAGCAGATAGGGTCCTGGTACTGCAAGAAAGGCCTTTCTTaGACTCCAGCAGCCGCATTG +
Preference number: 4 (lower is better)
Translates to: CVEGSGASSKEQIGSWYCKKGLS*TPAAAL
Trigger: CAATGCGGCTGCTGGAGTCCAAGAAAGGCCTTTCTT...GCAGTACCAGGACCCTATCTGCTCCTTGCTAGAGGCCCCTGAACCTTCCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR CCA 90 bp TGTGTGGAAGGTTCAGGGGCCTCTAGCAAGGAGCAGATAGGGTCCTGGTACTGCTGTTATTTGGCTCCATaGACTCCACAGCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: CVEGSGASSKEQIGSWYCCYLAP*TPQPPG
Trigger: TCCTGGTGGCTGTGGAGTCCATGGAGCCAAATAACA...GCAGTACCAGGACCCTATCTGCTCCTTGCTAGAGGCCCCTGAACCTTCCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR CCA 90 bp CTCACCCGTTTCTGCCTCCACCCTGAGCAGGACTTGCCCATGTTAACTTGGGAGTGTTATTTGGCTCCATaGACTCCACAGCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: LTRFCLHPEQDLPMLTWECYLAP*TPQPPG
Trigger: TCCTGGTGGCTGTGGAGTCCATGGAGCCAAATAACA...CTCCCAAGTTAACATGGGCAAGTCCTGCTCAGGGTGGAGGCAGAAACGGGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
CDS-3UTR CCA 90 bp CTCTCAGGAAACAGGCCTGCAGGTGGGACGTTCCTGAAGGCCTGGGGTATCCTCAACCACAATGTTATTTaGCTCCATGGACTCCACAGC +
Preference number: 4 (lower is better)
Translates to: LSGNRPAGGTFLKAWGILNHNVI*LHGLHS
Trigger: GCTGTGGAGTCCATGGAGCCAAATAACATTGTGGTT...GAGGATACCCCAGGCCTTCAGGAACGTCCCACCTGCAGGCCTGTTTCCTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CCA 90 bp GCCTGCAGGTGGGACGTTCCTGAAGGCCTGGGGTATCCTCTGCTTCACTGTTCCAACCACAATGTTATTTaGCTCCATGGACTCCACAGC +
Preference number: 4 (lower is better)
Translates to: ACRWDVPEGLGYPLLHCSNHNVI*LHGLHS
Trigger: GCTGTGGAGTCCATGGAGCCAAATAACATTGTGGTT...GGAACAGTGAAGCAGAGGATACCCCAGGCCTTCAGGAACGTCCCACCTGCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CCA 90 bp TTCTGCACAGAACACATAGGCAGGCGCCTCTTGGGAAAGGGGCCAGGGAGGTACGCTTGCAGAACCTCATaGACATTTTCCTCTAGCCAG +
Preference number: 4 (lower is better)
Translates to: FCTEHIGRRLLGKGPGRYACRTS*TFSSSQ
Trigger: CTGGCTAGAGGAAAATGTCCATGAGGTTCTGCAAGC...GTACCTCCCTGGCCCCTTTCCCAAGAGGCGCCTGCCTATGTGTTCTGTGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR TCA 90 bp AGGTTTTCCGCGCTTGCTTGTCATTTCCACAACATACATCCATTCCTAGGCAGTAGCGGCAGGCATCACTaGGCTGCAGCAGGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: RFSALACHFHNIHPFLGSSGRHH*AAAGSP
Trigger: TGGACTCCCTGCTGCAGCTCAGTGATGCCTGCCGCT...ACTGCCTAGGAATGGATGTATGTTGTGGAAATGACAAGCAAGCGCGGAAAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
CDS-3UTR TCA 90 bp AAGCTCCAGGCCACTACGGGCTACACAGTGAGACTCTGTCTCAGAAAGTTACTTGCTCAAGGCTCAGGATaGGCTTGCAGTACTCCAGCG +
Preference number: 4 (lower is better)
Translates to: KLQATTGYTVRLCLRKLLAQGSG*ACSTPA
Trigger: CGCTGGAGTACTGCAAGCTCATCCTGAGCCTTGAGC...AAGTAACTTTCTGAGACAGAGTCTCACTGTGTAGCCCGTAGTGGCCTGGAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR TCA 90 bp GTGGAAGGTTCAGGGGCCTCTAGCAAGGAGCAGATAGGGTCCTGGTACTGCAGAATAGGCCAGTGGAACTaGGAAGGCAAAATTTGGGAG +
Preference number: 4 (lower is better)
Translates to: VEGSGASSKEQIGSWYCRIGQWN*EGKIWE
Trigger: CTCCCAAATTTTGCCTTCTCAGTTCCACTGGCCTAT...TCTGCAGTACCAGGACCCTATCTGCTCCTTGCTAGAGGCCCCTGAACCTTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR TCA 90 bp CTCACCCGTTTCTGCCTCCACCCTGAGCAGGACTTGCCCATGTTAACTTGGGAGTTTCCAAAGAAAGTGTaGCCTCCCCAGGTACAGACT +
Preference number: 4 (lower is better)
Translates to: LTRFCLHPEQDLPMLTWEFPKKV*PPQVQT
Trigger: AGTCTGTACCTGGGGAGGTCACACTTTCTTTGGAAA...CTCCCAAGTTAACATGGGCAAGTCCTGCTCAGGGTGGAGGCAGAAACGGGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
CDS-3UTR GCA 90 bp GACCATGTGCCAGGCCCTGGGTTTGACCTCAGTGTTGCAAACATGCTGGGTGTAGAACAAGGGGTGGAATaGACACTCCATGCTGTACAG +
Preference number: 4 (lower is better)
Translates to: DHVPGPGFDLSVANMLGVEQGVE*TLHAVQ
Trigger: CTGTACAGCATGGAGTGTGCATTCCACCCCTTGTTC...TACACCCAGCATGTTTGCAACACTGAGGTCAAACCCAGGGCCTGGCACATGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR GCA 90 bp ATGCTGGGTGTAGCATGTGTGGAAGGTTCAGGGGCCTCTAGCAAGGAGCAGATAAACATGGTGAGTGCCTaGTGTATCAGGAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: MLGVACVEGSGASSKEQINMVSA*CIRREA
Trigger: GGCTTCCCTCCTGATACAGCAGGCACTCACCATGTT...TATCTGCTCCTTGCTAGAGGCCCCTGAACCTTCCACACATGCTACACCCAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR GCA 90 bp CATAGCAAGCTCCAGGCCACTACGGGCTACACAGTGAGACTCTGTCTCAGAAAGAACATGGTGAGTGCCTaGTGTATCAGGAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: HSKLQATTGYTVRLCLRKNMVSA*CIRREA
Trigger: GGCTTCCCTCCTGATACAGCAGGCACTCACCATGTT...CTTTCTGAGACAGAGTCTCACTGTGTAGCCCGTAGTGGCCTGGAGCTTGCTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CCA 90 bp GTGGAAGGTTCAGGGGCCTCTAGCAAGGAGCAGATAGGGTCCTGGTACTGCAGAGCTTGCAGAACCTCATaGACATTTTCCTCTAGCCAG +
Preference number: 4 (lower is better)
Translates to: VEGSGASSKEQIGSWYCRACRTS*TFSSSQ
Trigger: CTGGCTAGAGGAAAATGTCCATGAGGTTCTGCAAGC...TCTGCAGTACCAGGACCCTATCTGCTCCTTGCTAGAGGCCCCTGAACCTTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR CCA 90 bp AATGACCAACAATTCTGCACAGAACACATAGGCAGGCGCCTCTTGGGAAAGGGGGTTTCCGTGGCTGACTaGACTCAGCCTCTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: NDQQFCTEHIGRRLLGKGVSVAD*TQPLWS
Trigger: AGACCAGAGAGGCTGAGTCCAGTCAGCCACGGAAAC...CCCCTTTCCCAAGAGGCGCCTGCCTATGTGTTCTGTGCAGAATTGTTGGTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
3UTR CAA 72 bp TTCCACAAACAGCTTATGAGACACAGACCTCCGGCCTaGCCTGGCTATGGTCTTTGTTCCTGCCACTGGACT +
Preference number: 4 (lower is better)
Translates to: FHKQLMRHRPPA*PGYGLCSCHWT
Trigger: AGTCCAGTGGCAGGAACAAAGACCATAGCCAGGCAAGGCCGGAGGTCTGTGTCTCATAAGCTGTTTGTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
CDS-3UTR TCA 90 bp TTAGGTGTGGTGGTGCACTCTTTTAATCCTAACATTTGGGAGACAGAGGCAGGCGCTCAAGGCTCAGGATaGGCTTGCAGTACTCCAGCG +
Preference number: 4 (lower is better)
Translates to: LGVVVHSFNPNIWETEAGAQGSG*ACSTPA
Trigger: CGCTGGAGTACTGCAAGCTCATCCTGAGCCTTGAGC...GCCTGCCTCTGTCTCCCAAATGTTAGGATTAAAAGAGTGCACCACCACACCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR TCA 90 bp CGCACTGCTTCTGGGACTGTTTCTGAGGACACTGGAGGAAGCTCACCCAGAGTAATAGGCCAGTGGAACTaGGAAGGCAAAATTTGGGAG +
Preference number: 4 (lower is better)
Translates to: RTASGTVSEDTGGSSPRVIGQWN*EGKIWE
Trigger: CTCCCAAATTTTGCCTTCTCAGTTCCACTGGCCTAT...TACTCTGGGTGAGCTTCCTCCAGTGTCCTCAGAAACAGTCCCAGAAGCAGTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR GCA 90 bp AGCAAGCTCCAGGCCACTACGGGCTACACAGTGAGACTCTGTCTCAGAAAGTTATGGTCCCTCTTCCTCTaGGTCATCGTCATCAAGGAG +
Preference number: 4 (lower is better)
Translates to: SKLQATTGYTVRLCLRKLWSLFL*VIVIKE
Trigger: CTCCTTGATGACGATGACGCAGAGGAAGAGGGACCA...TAACTTTCTGAGACAGAGTCTCACTGTGTAGCCCGTAGTGGCCTGGAGCTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR GCA 90 bp GACCATGTGCCAGGCCCTGGGTTTGACCTCAGTGTTGCAAACATGCTGGGTGTATCGGAGTTTGCCACTTaGATTAGACTGTTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: DHVPGPGFDLSVANMLGVSEFAT*IRLFRG
Trigger: TCCTCGGAACAGTCTAATGCAAGTGGCAAACTCCGA...TACACCCAGCATGTTTGCAACACTGAGGTCAAACCCAGGGCCTGGCACATGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR GCA 90 bp ATGCTGGGTGTAGCATGTGTGGAAGGTTCAGGGGCCTCTAGCAAGGAGCAGATATCCACATATAGGACGTaGTTCCTGGAGCTCAGTGGA +
Preference number: 4 (lower is better)
Translates to: MLGVACVEGSGASSKEQISTYRT*FLELSG
Trigger: TCCACTGAGCTCCAGGAAGCACGTCCTATATGTGGA...TATCTGCTCCTTGCTAGAGGCCCCTGAACCTTCCACACATGCTACACCCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR GCA 90 bp CTCAGGAAACAGGCCTGCAGGTGGGACGTTCCTGAAGGCCTGGGGTATCCTCTGCAGGAACTTGTGCTGTaGTTGTTGGTATTCTTCATT +
Preference number: 4 (lower is better)
Translates to: LRKQACRWDVPEGLGYPLQELVL*LLVFFI
Trigger: AATGAAGAATACCAACAAGCACAGCACAAGTTCCTG...CAGAGGATACCCCAGGCCTTCAGGAACGTCCCACCTGCAGGCCTGTTTCCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR GCA 90 bp TCAGGAAACAGGCCTGCAGGTGGGACGTTCCTGAAGGCCTGGGGTATCCTCTGCCAGGAACTTGTGCTGTaGTTGTTGGTATTCTTCATT +
Preference number: 4 (lower is better)
Translates to: SGNRPAGGTFLKAWGILCQELVL*LLVFFI
Trigger: AATGAAGAATACCAACAAGCACAGCACAAGTTCCTG...GCAGAGGATACCCCAGGCCTTCAGGAACGTCCCACCTGCAGGCCTGTTTCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR GCA 90 bp TTGCCTGGCTATGGTCTTTGTTCCTGCCACTGGACTCGGGTTCTTGGTCAGGGTGCCACCAGGAACTTGTaGTGTGCTTGTTGGTATTCT +
Preference number: 4 (lower is better)
Translates to: LPGYGLCSCHWTRVLGQGATRNL*CACWYS
Trigger: AGAATACCAACAAGCACAGCACAAGTTCCTGGTGGC...ACCCTGACCAAGAACCCGAGTCCAGTGGCAGGAACAAAGACCATAGCCAGGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
CDS-3UTR GCA 90 bp AACACTTCTGAAGCCGATCATCTGATGGCCTCTCAGGAAACAGGCCTGCAGGTGGAACAAGGGGTGGAATaGACACTCCATGCTGTACAG +
Preference number: 4 (lower is better)
Translates to: NTSEADHLMASQETGLQVEQGVE*TLHAVQ
Trigger: CTGTACAGCATGGAGTGTGCATTCCACCCCTTGTTC...CACCTGCAGGCCTGTTTCCTGAGAGGCCATCAGATGATCGGCTTCAGAAGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR GCA 90 bp ATGCTGGGTGTAGCATGTGTGGAAGGTTCAGGGGCCTCTAGCAAGGAGCAGATAGAACAAGGGGTGGAATaGACACTCCATGCTGTACAG +
Preference number: 4 (lower is better)
Translates to: MLGVACVEGSGASSKEQIEQGVE*TLHAVQ
Trigger: CTGTACAGCATGGAGTGTGCATTCCACCCCTTGTTC...TATCTGCTCCTTGCTAGAGGCCCCTGAACCTTCCACACATGCTACACCCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR GCA 90 bp GACCATGTGCCAGGCCCTGGGTTTGACCTCAGTGTTGCAAACATGCTGGGTGTATCCTATTCTCAGGTCTaGGATAATCCAGCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: DHVPGPGFDLSVANMLGVSYSQV*DNPACK
Trigger: CTTGCAGGCTGGATTATCGCAGACCTGAGAATAGGA...TACACCCAGCATGTTTGCAACACTGAGGTCAAACCCAGGGCCTGGCACATGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR CCA 90 bp CATAGCAAGCTCCAGGCCACTACGGGCTACACAGTGAGACTCTGTCTCAGAAAGTGTTATTTGGCTCCATaGACTCCACAGCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: HSKLQATTGYTVRLCLRKCYLAP*TPQPPG
Trigger: TCCTGGTGGCTGTGGAGTCCATGGAGCCAAATAACA...CTTTCTGAGACAGAGTCTCACTGTGTAGCCCGTAGTGGCCTGGAGCTTGCTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CCA 90 bp GTGGAAGGTTCAGGGGCCTCTAGCAAGGAGCAGATAGGGTCCTGGTACTGCAGAAACCACAATGTTATTTaGCTCCATGGACTCCACAGC +
Preference number: 4 (lower is better)
Translates to: VEGSGASSKEQIGSWYCRNHNVI*LHGLHS
Trigger: GCTGTGGAGTCCATGGAGCCAAATAACATTGTGGTT...TCTGCAGTACCAGGACCCTATCTGCTCCTTGCTAGAGGCCCCTGAACCTTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR CCA 90 bp CCATTCCTAGGCAGTCCTTCCTCCCCTTGGCTGAAACTCACCACAGGCCATTCCAACCACAATGTTATTTaGCTCCATGGACTCCACAGC +
Preference number: 4 (lower is better)
Translates to: PFLGSPSSPWLKLTTGHSNHNVI*LHGLHS
Trigger: GCTGTGGAGTCCATGGAGCCAAATAACATTGTGGTT...GGAATGGCCTGTGGTGAGTTTCAGCCAAGGGGAGGAAGGACTGCCTAGGAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
CDS-3UTR GCA 90 bp AGCAAGCTCCAGGCCACTACGGGCTACACAGTGAGACTCTGTCTCAGAAAGTTATCCACATATAGGACGTaGTTCCTGGAGCTCAGTGGA +
Preference number: 4 (lower is better)
Translates to: SKLQATTGYTVRLCLRKLSTYRT*FLELSG
Trigger: TCCACTGAGCTCCAGGAAGCACGTCCTATATGTGGA...TAACTTTCTGAGACAGAGTCTCACTGTGTAGCCCGTAGTGGCCTGGAGCTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR GCA 90 bp TGGAGGAAGCTCACCCAGAGTATAACCCACTCCCTTCAGAGGGAAAACAAAAGATTGATAGACCTGGTTTaGTGTACCGGGGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: WRKLTQSITHSLQRENKRLIDLV*CTGARC
Trigger: GCACCTGGCCCCGGTACAGCAAACCAGGTCTATCAA...TCTTTTGTTTTCCCTCTGAAGGGAGTGGGTTATACTCTGGGTGAGCTTCCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR CCA 90 bp AGCAAGCTCCAGGCCACTACGGGCTACACAGTGAGACTCTGTCTCAGAAAGTTAAAGAAAGGCCTTTCTTaGACTCCAGCAGCCGCATTG +
Preference number: 4 (lower is better)
Translates to: SKLQATTGYTVRLCLRKLKKGLS*TPAAAL
Trigger: CAATGCGGCTGCTGGAGTCCAAGAAAGGCCTTTCTT...TAACTTTCTGAGACAGAGTCTCACTGTGTAGCCCGTAGTGGCCTGGAGCTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
3UTR CAA 72 bp CAACATACATCCATTCCTAGGCAGTCCTTCCTCCCCTaGGCTGAAACTCACCACAGGCCATTCCAACTTGGA +
Preference number: 4 (lower is better)
Translates to: QHTSIPRQSFLP*AETHHRPFQLG
Trigger: TCCAAGTTGGAATGGCCTGTGGTGAGTTTCAGCCAAGGGGAGGAAGGACTGCCTAGGAATGGATGTATGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
CDS-3UTR TCA 90 bp AATGACCAACAATTCTGCACAGAACACATAGGCAGGCGCCTCTTGGGAAAGGGGTTTCCAAAGAAAGTGTaGCCTCCCCAGGTACAGACT +
Preference number: 4 (lower is better)
Translates to: NDQQFCTEHIGRRLLGKGFPKKV*PPQVQT
Trigger: AGTCTGTACCTGGGGAGGTCACACTTTCTTTGGAAA...CCCCTTTCCCAAGAGGCGCCTGCCTATGTGTTCTGTGCAGAATTGTTGGTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR GCA 90 bp GTGGAAGGTTCAGGGGCCTCTAGCAAGGAGCAGATAGGGTCCTGGTACTGCAGACCGAGGATTCTCCTGTaGAGCTTTTCTTATTTTTCT +
Preference number: 4 (lower is better)
Translates to: VEGSGASSKEQIGSWYCRPRILL*SFSYFS
Trigger: AGAAAAATAAGAAAAGCTGCACAGGAGAATCCTCGG...TCTGCAGTACCAGGACCCTATCTGCTCCTTGCTAGAGGCCCCTGAACCTTCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR GCA 90 bp GTGAGACTCTGTCTCAGAAAGTTACTTTTCCCGATGATGATCCACAGGTGGTGTTTGATAGACCTGGTTTaGTGTACCGGGGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: VRLCLRKLLFPMMIHRWCLIDLV*CTGARC
Trigger: GCACCTGGCCCCGGTACAGCAAACCAGGTCTATCAA...ACACCACCTGTGGATCATCATCGGGAAAAGTAACTTTCTGAGACAGAGTCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR GCA 90 bp AGCAAGCTCCAGGCCACTACGGGCTACACAGTGAGACTCTGTCTCAGAAAGTTAGCCACCAGGAACTTGTaGTGTGCTTGTTGGTATTCT +
Preference number: 4 (lower is better)
Translates to: SKLQATTGYTVRLCLRKLATRNL*CACWYS
Trigger: AGAATACCAACAAGCACAGCACAAGTTCCTGGTGGC...TAACTTTCTGAGACAGAGTCTCACTGTGTAGCCCGTAGTGGCCTGGAGCTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR GCA 90 bp AGCAAGCTCCAGGCCACTACGGGCTACACAGTGAGACTCTGTCTCAGAAAGTTATCCTATTCTCAGGTCTaGGATAATCCAGCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: SKLQATTGYTVRLCLRKLSYSQV*DNPACK
Trigger: CTTGCAGGCTGGATTATCGCAGACCTGAGAATAGGA...TAACTTTCTGAGACAGAGTCTCACTGTGTAGCCCGTAGTGGCCTGGAGCTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR GCA 90 bp TTAGGTGTGGTGGTGCACTCTTTTAATCCTAACATTTGGGAGACAGAGGCAGGCAGGGAACATGGTGAGTaGCTGCTGTATCAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: LGVVVHSFNPNIWETEAGREHGE*LLYQEG
Trigger: TCCCTCCTGATACAGCAGGCACTCACCATGTTCCCT...GCCTGCCTCTGTCTCCCAAATGTTAGGATTAAAAGAGTGCACCACCACACCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CCA 90 bp TGGTGGTGCACTCTTTTAATCCTAACATTTGGGAGACAGAGGCAGGCGGATCTCAAGAAAGGCCTTTCTTaGACTCCAGCAGCCGCATTG +
Preference number: 4 (lower is better)
Translates to: WWCTLLILTFGRQRQADLKKGLS*TPAAAL
Trigger: CAATGCGGCTGCTGGAGTCCAAGAAAGGCCTTTCTT...GAGATCCGCCTGCCTCTGTCTCCCAAATGTTAGGATTAAAAGAGTGCACCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CCA 90 bp TGCAGGTTAGGTGTGGTGGTGCACTCTTTTAATCCTAACATTTGGGAGACAGAGGTTTCCGTGGCTGACTaGACTCAGCCTCTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: CRLGVVVHSFNPNIWETEVSVAD*TQPLWS
Trigger: AGACCAGAGAGGCTGAGTCCAGTCAGCCACGGAAAC...CTCTGTCTCCCAAATGTTAGGATTAAAAGAGTGCACCACCACACCTAACCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
3UTR CAA 72 bp AAGGAAGAGGCAGGATGCCAGGTTTTCCGCGCTTGCTaGTCATTTCCACAACATACATCCATTCCTAGGCAG +
Preference number: 4 (lower is better)
Translates to: KEEAGCQVFRAC*SFPQHTSIPRQ
Trigger: CTGCCTAGGAATGGATGTATGTTGTGGAAATGACAAGCAAGCGCGGAAAACCTGGCATCCTGCCTCTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
CDS-3UTR TCA 90 bp TTTGAGATGGGATCTCATATAACTCAGACTGGCTTTGAACTTAATTATGTAGCAGGGGGCCGGGGTGGCTaGACCCACTGCTGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: FEMGSHITQTGFELNYVAGGRGG*THCCPQ
Trigger: TTGAGGACAGCAGTGGGTTCAGCCACCCCGGCCCCC...TGCTACATAATTAAGTTCAAAGCCAGTCTGAGTTATATGAGATCCCATCTCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR TCA 90 bp ATGACATGCAGGTTAGGTGTGGTGGTGCACTCTTTTAATCCTAACATTTGGGAGGTTGCCTGGCAGAGCTaGGCTCATGCTCAGGTAAGT +
Preference number: 4 (lower is better)
Translates to: MTCRLGVVVHSFNPNIWEVAWQS*AHAQVS
Trigger: ACTTACCTGAGCATGAGCTCAGCTCTGCCAGGCAAC...CTCCCAAATGTTAGGATTAAAAGAGTGCACCACCACACCTAACCTGCATGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR GCA 90 bp GGCTACACAGTGAGACTCTGTCTCAGAAAGTTACTTTTCCCGATGATGATCCACTGGTCCCTCTTCCTCTaGGTCATCGTCATCAAGGAG +
Preference number: 4 (lower is better)
Translates to: GYTVRLCLRKLLFPMMIHWSLFL*VIVIKE
Trigger: CTCCTTGATGACGATGACGCAGAGGAAGAGGGACCA...GTGGATCATCATCGGGAAAAGTAACTTTCTGAGACAGAGTCTCACTGTGTAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR GCA 90 bp TCTAGCAAGGAGCAGATAGGGTCCTGGTACTGCAGACCCTGGGACAACCCTTCTCAGGAACTTGTGCTGTaGTTGTTGGTATTCTTCATT +
Preference number: 4 (lower is better)
Translates to: SSKEQIGSWYCRPWDNPSQELVL*LLVFFI
Trigger: AATGAAGAATACCAACAAGCACAGCACAAGTTCCTG...AGAAGGGTTGTCCCAGGGTCTGCAGTACCAGGACCCTATCTGCTCCTTGCTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR TCA 90 bp TGGAGGAAGCTCACCCAGAGTATAACCCACTCCCTTCAGAGGGAAAACAAAAGATTTCCAAAGAAAGTGTaGCCTCCCCAGGTACAGACT +
Preference number: 4 (lower is better)
Translates to: WRKLTQSITHSLQRENKRFPKKV*PPQVQT
Trigger: AGTCTGTACCTGGGGAGGTCACACTTTCTTTGGAAA...TCTTTTGTTTTCCCTCTGAAGGGAGTGGGTTATACTCTGGGTGAGCTTCCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR GCA 90 bp TGGAGGAAGCTCACCCAGAGTATAACCCACTCCCTTCAGAGGGAAAACAAAAGATCGGAGTTTGCCACTTaGATTAGACTGTTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: WRKLTQSITHSLQRENKRSEFAT*IRLFRG
Trigger: TCCTCGGAACAGTCTAATGCAAGTGGCAAACTCCGA...TCTTTTGTTTTCCCTCTGAAGGGAGTGGGTTATACTCTGGGTGAGCTTCCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR GCA 90 bp CTCCAGCCTCTCCCCCTGAACAATGAGACACAGCTAAGTGGGGATAGACTTGAGCCGAGGATTCTCCTGTaGAGCTTTTCTTATTTTTCT +
Preference number: 4 (lower is better)
Translates to: LQPLPLNNETQLSGDRLEPRILL*SFSYFS
Trigger: AGAAAAATAAGAAAAGCTGCACAGGAGAATCCTCGG...CTCAAGTCTATCCCCACTTAGCTGTGTCTCATTGTTCAGGGGGAGAGGCTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
CDS-3UTR GCA 90 bp TGGAGGAAGCTCACCCAGAGTATAACCCACTCCCTTCAGAGGGAAAACAAAAGAGCCACCAGGAACTTGTaGTGTGCTTGTTGGTATTCT +
Preference number: 4 (lower is better)
Translates to: WRKLTQSITHSLQRENKRATRNL*CACWYS
Trigger: AGAATACCAACAAGCACAGCACAAGTTCCTGGTGGC...TCTTTTGTTTTCCCTCTGAAGGGAGTGGGTTATACTCTGGGTGAGCTTCCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR CCA 90 bp GGCTACACAGTGAGACTCTGTCTCAGAAAGTTACTTTTCCCGATGATGATCCACTGTTATTTGGCTCCATaGACTCCACAGCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: GYTVRLCLRKLLFPMMIHCYLAP*TPQPPG
Trigger: TCCTGGTGGCTGTGGAGTCCATGGAGCCAAATAACA...GTGGATCATCATCGGGAAAAGTAACTTTCTGAGACAGAGTCTCACTGTGTAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR TCA 90 bp TGCAGGTTAGGTGTGGTGGTGCACTCTTTTAATCCTAACATTTGGGAGACAGAGTTTCCAAAGAAAGTGTaGCCTCCCCAGGTACAGACT +
Preference number: 4 (lower is better)
Translates to: CRLGVVVHSFNPNIWETEFPKKV*PPQVQT
Trigger: AGTCTGTACCTGGGGAGGTCACACTTTCTTTGGAAA...CTCTGTCTCCCAAATGTTAGGATTAAAAGAGTGCACCACCACACCTAACCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR GCA 90 bp AGCAAGCTCCAGGCCACTACGGGCTACACAGTGAGACTCTGTCTCAGAAAGTTACCGAGGATTCTCCTGTaGAGCTTTTCTTATTTTTCT +
Preference number: 4 (lower is better)
Translates to: SKLQATTGYTVRLCLRKLPRILL*SFSYFS
Trigger: AGAAAAATAAGAAAAGCTGCACAGGAGAATCCTCGG...TAACTTTCTGAGACAGAGTCTCACTGTGTAGCCCGTAGTGGCCTGGAGCTTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212571.2
CDS-3UTR CCA 90 bp GGCTACACAGTGAGACTCTGTCTCAGAAAGTTACTTTTCCCGATGATGATCCACGCTTGCAGAACCTCATaGACATTTTCCTCTAGCCAG +
Preference number: 4 (lower is better)
Translates to: GYTVRLCLRKLLFPMMIHACRTS*TFSSSQ
Trigger: CTGGCTAGAGGAAAATGTCCATGAGGTTCTGCAAGC...GTGGATCATCATCGGGAAAAGTAACTTTCTGAGACAGAGTCTCACTGTGTAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
3UTR CAA 72 bp CTCTGCTTCACTGTTCCTAGAGCATGGCTCTTCATTTaGGAATTCGTTGTCACGTGGTTGCAGAATAGCTGC +
Preference number: 4 (lower is better)
Translates to: LCFTVPRAWLFI*EFVVTWLQNSC
Trigger: GCAGCTATTCTGCAACCACGTGACAACGAATTCCAAAATGAAGAGCCATGCTCTAGGAACAGTGAAGCAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
ENSMUST00000212880.2
CDS-3UTR TCA 90 bp ATGACATGCAGGTTAGGTGTGGTGGTGCACTCTTTTAATCCTAACATTTGGGAGATAGGCCAGTGGAACTaGGAAGGCAAAATTTGGGAG +
Preference number: 4 (lower is better)
Translates to: MTCRLGVVVHSFNPNIWEIGQWN*EGKIWE
Trigger: CTCCCAAATTTTGCCTTCTCAGTTCCACTGGCCTAT...CTCCCAAATGTTAGGATTAAAAGAGTGCACCACCACACCTAACCTGCATGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR GCA 90 bp TCTTTCATTTCTTGTGAACTTTCTCTGAGAGGCAGCAAACAGGTTTTCTCCCTGTCCACATATAGGACGTaGTTCCTGGAGCTCAGTGGA +
Preference number: 4 (lower is better)
Translates to: SFISCELSLRGSKQVFSLSTYRT*FLELSG
Trigger: TCCACTGAGCTCCAGGAAGCACGTCCTATATGTGGA...CAGGGAGAAAACCTGTTTGCTGCCTCTCAGAGAAAGTTCACAAGAAATGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR GCA 90 bp ATGACATGCAGGTTAGGTGTGGTGGTGCACTCTTTTAATCCTAACATTTGGGAGGCCACCAGGAACTTGTaGTGTGCTTGTTGGTATTCT +
Preference number: 4 (lower is better)
Translates to: MTCRLGVVVHSFNPNIWEATRNL*CACWYS
Trigger: AGAATACCAACAAGCACAGCACAAGTTCCTGGTGGC...CTCCCAAATGTTAGGATTAAAAGAGTGCACCACCACACCTAACCTGCATGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR TCA 90 bp TCTTTCATTTCTTGTGAACTTTCTCTGAGAGGCAGCAAACAGGTTTTCTCCCTGTTTCCAAAGAAAGTGTaGCCTCCCCAGGTACAGACT +
Preference number: 4 (lower is better)
Translates to: SFISCELSLRGSKQVFSLFPKKV*PPQVQT
Trigger: AGTCTGTACCTGGGGAGGTCACACTTTCTTTGGAAA...CAGGGAGAAAACCTGTTTGCTGCCTCTCAGAGAAAGTTCACAAGAAATGAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR GCA 90 bp ATGGGATCTCATATAACTCAGACTGGCTTTGAACTTAATTATGTAGCAGAGGGTTGGTCCCTCTTCCTCTaGGTCATCGTCATCAAGGAG +
Preference number: 4 (lower is better)
Translates to: MGSHITQTGFELNYVAEGWSLFL*VIVIKE
Trigger: CTCCTTGATGACGATGACGCAGAGGAAGAGGGACCA...ACCCTCTGCTACATAATTAAGTTCAAAGCCAGTCTGAGTTATATGAGATCCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR CCA 90 bp TTTGAGATGGGATCTCATATAACTCAGACTGGCTTTGAACTTAATTATGTAGCAAGTATCACGTGGCGGTaGATGTTTCTGGGCGCACGC +
Preference number: 4 (lower is better)
Translates to: FEMGSHITQTGFELNYVASITWR*MFLGAR
Trigger: GCGTGCGCCCAGAAACATCCACCGCCACGTGATACT...TGCTACATAATTAAGTTCAAAGCCAGTCTGAGTTATATGAGATCCCATCTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR GCA 90 bp GAGATGGGATCTCATATAACTCAGACTGGCTTTGAACTTAATTATGTAGCAGAGTCCACATATAGGACGTaGTTCCTGGAGCTCAGTGGA +
Preference number: 4 (lower is better)
Translates to: EMGSHITQTGFELNYVAESTYRT*FLELSG
Trigger: TCCACTGAGCTCCAGGAAGCACGTCCTATATGTGGA...CTCTGCTACATAATTAAGTTCAAAGCCAGTCTGAGTTATATGAGATCCCATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR GCA 90 bp GGCTACACAGTGAGACTCTGTCTCAGAAAGTTACTTTTCCCGATGATGATCCACCAGGAACTTGTGCTGTaGTTGTTGGTATTCTTCATT +
Preference number: 4 (lower is better)
Translates to: GYTVRLCLRKLLFPMMIHQELVL*LLVFFI
Trigger: AATGAAGAATACCAACAAGCACAGCACAAGTTCCTG...GTGGATCATCATCGGGAAAAGTAACTTTCTGAGACAGAGTCTCACTGTGTAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR GCA 90 bp TTTGAGATGGGATCTCATATAACTCAGACTGGCTTTGAACTTAATTATGTAGCAAGGGAACATGGTGAGTaGCTGCTGTATCAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: FEMGSHITQTGFELNYVAREHGE*LLYQEG
Trigger: TCCCTCCTGATACAGCAGGCACTCACCATGTTCCCT...TGCTACATAATTAAGTTCAAAGCCAGTCTGAGTTATATGAGATCCCATCTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR CAA 90 bp GGGAAAGGGGCCAGGGAGGTACGGGAGGAGCGGGACACACTGTCACCCCTACCTGGTGGCCCCTCCATCTaGCTTGGTCTCTGCGTTTCC +
Preference number: 5 (lower is better)
Translates to: GKGAREVREERDTLSPLPGGPSI*LGLCVS
Trigger: GGAAACGCAGAGACCAAGCAAGATGGAGGGGCCACC...AGGTAGGGGTGACAGTGTGTCCCGCTCCTCCCGTACCTCCCTGGCCCCTTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS TCA 90 bp TCCCCAGGTACAGACTCACCAGCTGGCCCAAGGCGGGAGGCTGGCTaGTCTCAGCATCCGGCCCAAAGAAGCGGTGGTTTGAGACCGTGG +
Preference number: 5 (lower is better)
Translates to: SPGTDSPAGPRREAG*SQHPAQRSGGLRPW
Trigger: CCACGGTCTCAAACCACCGCTTCTTTGGGCCGGATGCTGAGATCAGCCAGCCTCCCGCCTTGGGCCAGCTGGTGAGTCTGTACCTGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS CCA 90 bp GACCTCCCCAGGTACAGACTCACCAGCTGGCCCAAGGCGGGAGGCTaGCTGATCTCAGCATCCGGCCCAAAGAAGCGGTGGTTTGAGACC +
Preference number: 5 (lower is better)
Translates to: DLPRYRLTSWPKAGG*LISASGPKKRWFET
Trigger: GGTCTCAAACCACCGCTTCTTTGGGCCGGATGCTGAGATCAGCCAGCCTCCCGCCTTGGGCCAGCTGGTGAGTCTGTACCTGGGGAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp CTCAGGAAACAGGCCTGCAGGTGGGACGTTCCTGAAGGCCTGGGGTATCCTCTGCACCCAGCCCCGGTTTaGGTCCCTCTTCCTCTGCGT +
Preference number: 5 (lower is better)
Translates to: LRKQACRWDVPEGLGYPLHPAPV*VPLPLR
Trigger: ACGCAGAGGAAGAGGGACCAAAACCGGGGCTGGGTG...CAGAGGATACCCCAGGCCTTCAGGAACGTCCCACCTGCAGGCCTGTTTCCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp AGGCAGGCGCCTCTTGGGAAAGGGGCCAGGGAGGTACGGGAGGAGCGGGACACAAGCTCAAACCGGTTGTaGACACGGACTCCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: RQAPLGKGAREVREERDTSSNRL*TRTPSF
Trigger: GAAGGAAGGAGTCCGTGTCAACAACCGGTTTGAGCT...TGTGTCCCGCTCCTCCCGTACCTCCCTGGCCCCTTTCCCAAGAGGCGCCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS GCA 90 bp GTGCTCTTAGGGGTCGTCAGCCATGTACACTTGGGATACACACGCTaGCTCTGTCGAGGCCTTTGCTCGCCCAGGACCGCTCGAGCACCA +
Preference number: 5 (lower is better)
Translates to: VLLGVVSHVHLGYTR*LCRGLCSPRTARAP
Trigger: TGGTGCTCGAGCGGTCCTGGGCGAGCAAAGGCCTCGACAGAGGCAGCGTGTGTATCCCAAGTGTACATGGCTGACGACCCCTAAGAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp CCTCTCAGGAAACAGGCCTGCAGGTGGGACGTTCCTGAAGGCCTGGGGTATCCTGGTGGCCCCTCCATCTaGCTTGGTCTCTGCGTTTCC +
Preference number: 5 (lower is better)
Translates to: PLRKQACRWDVPEGLGYPGGPSI*LGLCVS
Trigger: GGAAACGCAGAGACCAAGCAAGATGGAGGGGCCACC...AGGATACCCCAGGCCTTCAGGAACGTCCCACCTGCAGGCCTGTTTCCTGAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp CGCCTCTTGGGAAAGGGGCCAGGGAGGTACGGGAGGAGCGGGACACACTGTCACACTCCAGCAGCCGCATaGATAGACCTGGTTTGCTGT +
Preference number: 5 (lower is better)
Translates to: RLLGKGPGRYGRSGTHCHTPAAA*IDLVCC
Trigger: ACAGCAAACCAGGTCTATCAATGCGGCTGCTGGAGT...GTGACAGTGTGTCCCGCTCCTCCCGTACCTCCCTGGCCCCTTTCCCAAGAGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp CGCCTCTTGGGAAAGGGGCCAGGGAGGTACGGGAGGAGCGGGACACACTGTCACGTCTCGAGCCATCTCTaGATCCTCTTGAAAGCGGCA +
Preference number: 5 (lower is better)
Translates to: RLLGKGPGRYGRSGTHCHVSSHL*ILLKAA
Trigger: TGCCGCTTTCAAGAGGATCAAGAGATGGCTCGAGAC...GTGACAGTGTGTCCCGCTCCTCCCGTACCTCCCTGGCCCCTTTCCCAAGAGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp TTCTGCACAGAACACATAGGCAGGCGCCTCTTGGGAAAGGGGCCAGGGAGGTACCAGGAGGGAAGCCTGTaGCCTGGCAGAGCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: FCTEHIGRRLLGKGPGRYQEGSL*PGRAEL
Trigger: GAGCTCAGCTCTGCCAGGCAACAGGCTTCCCTCCTG...GTACCTCCCTGGCCCCTTTCCCAAGAGGCGCCTGCCTATGTGTTCTGTGCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp CACATAGGCAGGCGCCTCTTGGGAAAGGGGCCAGGGAGGTACGGGAGGAGCGGGGCTCTGTGGTGTAATTaGGCAACAAGGACCGGAAGA +
Preference number: 5 (lower is better)
Translates to: HIGRRLLGKGPGRYGRSGALWCN*ATRTGR
Trigger: TCTTCCGGTCCTTGTTGCCAAATTACACCACAGAGC...CCCGCTCCTCCCGTACCTCCCTGGCCCCTTTCCCAAGAGGCGCCTGCCTATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000108840.4
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS TCA 90 bp GGGAGGCTGGCTGATCTCAGCATCCGGCCCAAAGAAGCGGTGGTTTaGGACCGTGGCATCAGGTCGCACACTGCAATACTCCAGCAGTGG +
Preference number: 5 (lower is better)
Translates to: GRLADLSIRPKEAVV*DRGIRSHTAILQQW
Trigger: CCACTGCTGGAGTATTGCAGTGTGCGACCTGATGCCACGGTCTCAAACCACCGCTTCTTTGGGCCGGATGCTGAGATCAGCCAGCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp AGACAGAGGCAGGCGGATCTCCGAGGCCAGCCTGGTCTACAGAGTAAAGGGCGGAGGCTCAGGATGAGCTaGCAGTACTCCAGCGCAGTA +
Preference number: 5 (lower is better)
Translates to: RQRQADLRGQPGLQSKGRRLRMS*QYSSAV
Trigger: TACTGCGCTGGAGTACTGCAAGCTCATCCTGAGCCT...CCGCCCTTTACTCTGTAGACCAGGCTGGCCTCGGAGATCCGCCTGCCTCTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp CAGACCATGTGCCAGGCCCTGGGTTTGACCTCAGTGTTGCAAACATGCTGGGTGCAGGAGGGAAGCCTGTaGCCTGGCAGAGCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: QTMCQALGLTSVLQTCWVQEGSL*PGRAEL
Trigger: GAGCTCAGCTCTGCCAGGCAACAGGCTTCCCTCCTG...CACCCAGCATGTTTGCAACACTGAGGTCAAACCCAGGGCCTGGCACATGGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR CAA 90 bp CGCCTCTTGGGAAAGGGGCCAGGGAGGTACGGGAGGAGCGGGACACACTGTCACGCTCTGTGGTGTAATTaGGCAACAAGGACCGGAAGA +
Preference number: 5 (lower is better)
Translates to: RLLGKGPGRYGRSGTHCHALWCN*ATRTGR
Trigger: TCTTCCGGTCCTTGTTGCCAAATTACACCACAGAGC...GTGACAGTGTGTCCCGCTCCTCCCGTACCTCCCTGGCCCCTTTCCCAAGAGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108840.4
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS CCA 90 bp TCTTTCCAAAGAAAGTGTGACCTCCCCAGGTACAGACTCACCAGCTaGCCCAAGGCGGGAGGCTGGCTGATCTCAGCATCCGGCCCAAAG +
Preference number: 5 (lower is better)
Translates to: SFQRKCDLPRYRLTS*PKAGGWLISASGPK
Trigger: CTTTGGGCCGGATGCTGAGATCAGCCAGCCTCCCGCCTTGGGCCAGCTGGTGAGTCTGTACCTGGGGAGGTCACACTTTCTTTGGAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp GCACAGCATCTGGACAGTTCAGTCCCAGTCCCCCTCGCCCTCAGGATTGTCCTCAGGCTCAGGATGAGCTaGCAGTACTCCAGCGCAGTA +
Preference number: 5 (lower is better)
Translates to: AQHLDSSVPVPLALRIVLRLRMS*QYSSAV
Trigger: TACTGCGCTGGAGTACTGCAAGCTCATCCTGAGCCT...GAGGACAATCCTGAGGGCGAGGGGGACTGGGACTGAACTGTCCAGATGCTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
CDS-3UTR CAA 90 bp TCTAGCAAGGAGCAGATAGGGTCCTGGTACTGCAGACCCTGGGACAACCCTTCTCAGGAGGGAAGCCTGTaGCCTGGCAGAGCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: SSKEQIGSWYCRPWDNPSQEGSL*PGRAEL
Trigger: GAGCTCAGCTCTGCCAGGCAACAGGCTTCCCTCCTG...AGAAGGGTTGTCCCAGGGTCTGCAGTACCAGGACCCTATCTGCTCCTTGCTAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS TCA 90 bp CAGACTGTGTGGTCACATCCGAGGGTAGGGCAGCAACAGCCTCCTTaGTCTCAGACAGTATCACGTGGCGGTGGATGTTTCTGGGCGCAC +
Preference number: 5 (lower is better)
Translates to: QTVWSHPRVGQQQPP*SQTVSRGGGCFWAH
Trigger: GTGCGCCCAGAAACATCCACCGCCACGTGATACTGTCTGAGATCAAGGAGGCTGTTGCTGCCCTACCCTCGGATGTGACCACACAGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
ENSMUST00000212880.2
CDS CCA 90 bp ATCTCAGACAGTATCACGTGGCGGTGGATGTTTCTGGGCGCACGCTaGTACAACACTTTCCGCCTGTTCTCACAGGCCTCCACAGCAGGG +
Preference number: 5 (lower is better)
Translates to: ISDSITWRWMFLGAR*YNTFRLFSQASTAG
Trigger: CCCTGCTGTGGAGGCCTGTGAGAACAGGCGGAAAGTGTTGTACCAGCGTGCGCCCAGAAACATCCACCGCCACGTGATACTGTCTGAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
ENSMUST00000212880.2
CDS CCA 90 bp GAGGGTAGGGCAGCAACAGCCTCCTTGATCTCAGACAGTATCACGTaGCGGTGGATGTTTCTGGGCGCACGCTGGTACAACACTTTCCGC +
Preference number: 5 (lower is better)
Translates to: EGRAATASLISDSIT*RWMFLGARWYNTFR
Trigger: GCGGAAAGTGTTGTACCAGCGTGCGCCCAGAAACATCCACCGCCACGTGATACTGTCTGAGATCAAGGAGGCTGTTGCTGCCCTACCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
ENSMUST00000212880.2
CDS-3UTR CAA 90 bp CTCAGGAAACAGGCCTGCAGGTGGGACGTTCCTGAAGGCCTGGGGTATCCTCTGAGCTCAAACCGGTTGTaGACACGGACTCCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: LRKQACRWDVPEGLGYPLSSNRL*TRTPSF
Trigger: GAAGGAAGGAGTCCGTGTCAACAACCGGTTTGAGCT...CAGAGGATACCCCAGGCCTTCAGGAACGTCCCACCTGCAGGCCTGTTTCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp GGAAACAGGCCTGCAGGTGGGACGTTCCTGAAGGCCTGGGGTATCCTCTGCTTCAGCTCAAACCGGTTGTaGACACGGACTCCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: GNRPAGGTFLKAWGILCFSSNRL*TRTPSF
Trigger: GAAGGAAGGAGTCCGTGTCAACAACCGGTTTGAGCT...GAAGCAGAGGATACCCCAGGCCTTCAGGAACGTCCCACCTGCAGGCCTGTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp GAGGACAAGCTACAGGAGCGAGCTCTCACTGTGCAGCACATGAGTCCTGGGGACGCCCCTCCATCTTGCTaGGTCTCTGCGTTTCCATGT +
Preference number: 5 (lower is better)
Translates to: EDKLQERALTVQHMSPGDAPPSC*VSAFPC
Trigger: ACATGGAAACGCAGAGACCAAGCAAGATGGAGGGGC...GTCCCCAGGACTCATGTGCTGCACAGTGAGAGCTCGCTCCTGTAGCTTGTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
CDS-3UTR CAA 90 bp CTCCGGCCTTGCCTGGCTATGGTCTTTGTTCCTGCCACTGGACTCGGGTTCTTGGTCAGCCATGTACACTaGGGATACACACGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: LRPCLAMVFVPATGLGFLVSHVH*GYTRCL
Trigger: GAGGCAGCGTGTGTATCCCAAGTGTACATGGCTGAC...CAAGAACCCGAGTCCAGTGGCAGGAACAAAGACCATAGCCAGGCAAGGCCGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
CDS-3UTR CAA 90 bp CTCAGGAAACAGGCCTGCAGGTGGGACGTTCCTGAAGGCCTGGGGTATCCTCTGACTCCAGCAGCCGCATaGATAGACCTGGTTTGCTGT +
Preference number: 5 (lower is better)
Translates to: LRKQACRWDVPEGLGYPLTPAAA*IDLVCC
Trigger: ACAGCAAACCAGGTCTATCAATGCGGCTGCTGGAGT...CAGAGGATACCCCAGGCCTTCAGGAACGTCCCACCTGCAGGCCTGTTTCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp AGACAGAGGCAGGCGGATCTCCGAGGCCAGCCTGGTCTACAGAGTAAAGGGCGGACAGCCACCAGGAACTaGTGCTGTGCTTGTTGGTAT +
Preference number: 5 (lower is better)
Translates to: RQRQADLRGQPGLQSKGRTATRN*CCACWY
Trigger: ATACCAACAAGCACAGCACAAGTTCCTGGTGGCTGT...CCGCCCTTTACTCTGTAGACCAGGCTGGCCTCGGAGATCCGCCTGCCTCTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp GGAAACAGGCCTGCAGGTGGGACGTTCCTGAAGGCCTGGGGTATCCTCTGCTTCGTCTCGAGCCATCTCTaGATCCTCTTGAAAGCGGCA +
Preference number: 5 (lower is better)
Translates to: GNRPAGGTFLKAWGILCFVSSHL*ILLKAA
Trigger: TGCCGCTTTCAAGAGGATCAAGAGATGGCTCGAGAC...GAAGCAGAGGATACCCCAGGCCTTCAGGAACGTCCCACCTGCAGGCCTGTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp GCCTGCAGGTGGGACGTTCCTGAAGGCCTGGGGTATCCTCTGCTTCACTGTTCCGTCTCGAGCCATCTCTaGATCCTCTTGAAAGCGGCA +
Preference number: 5 (lower is better)
Translates to: ACRWDVPEGLGYPLLHCSVSSHL*ILLKAA
Trigger: TGCCGCTTTCAAGAGGATCAAGAGATGGCTCGAGAC...GGAACAGTGAAGCAGAGGATACCCCAGGCCTTCAGGAACGTCCCACCTGCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp GCCTGCAGGTGGGACGTTCCTGAAGGCCTGGGGTATCCTCTGCTTCACTGTTCCCTGAGAAGGCAAAATTaGGGAGCTGGGACAGGTTCC +
Preference number: 5 (lower is better)
Translates to: ACRWDVPEGLGYPLLHCSLRRQN*GAGTGS
Trigger: GGAACCTGTCCCAGCTCCCAAATTTTGCCTTCTCAG...GGAACAGTGAAGCAGAGGATACCCCAGGCCTTCAGGAACGTCCCACCTGCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp GGAAACAGGCCTGCAGGTGGGACGTTCCTGAAGGCCTGGGGTATCCTCTGCTTCCTGAGAAGGCAAAATTaGGGAGCTGGGACAGGTTCC +
Preference number: 5 (lower is better)
Translates to: GNRPAGGTFLKAWGILCFLRRQN*GAGTGS
Trigger: GGAACCTGTCCCAGCTCCCAAATTTTGCCTTCTCAG...GAAGCAGAGGATACCCCAGGCCTTCAGGAACGTCCCACCTGCAGGCCTGTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp AACACTTCTGAAGCCGATCATCTGATGGCCTCTCAGGAAACAGGCCTGCAGGTGCAGGAGGGAAGCCTGTaGCCTGGCAGAGCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: NTSEADHLMASQETGLQVQEGSL*PGRAEL
Trigger: GAGCTCAGCTCTGCCAGGCAACAGGCTTCCCTCCTG...CACCTGCAGGCCTGTTTCCTGAGAGGCCATCAGATGATCGGCTTCAGAAGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS TCA 90 bp GGTCTCGAGCCATCTCTTGATCCTCTTGAAAGCGGCAGGCATCACTaGGCTGCAGCAGGGAGTCCACATGATAGGGGCTTGTCTGGAGCA +
Preference number: 5 (lower is better)
Translates to: GLEPSLDPLESGRHH*AAAGSPHDRGLSGA
Trigger: TGCTCCAGACAAGCCCCTATCATGTGGACTCCCTGCTGCAGCTCAGTGATGCCTGCCGCTTTCAAGAGGATCAAGAGATGGCTCGAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS GCA 90 bp AGCCATGTACACTTGGGATACACACGCTGCCTCTGTCGAGGCCTTTaGTCGCCCAGGACCGCTCGAGCACCAAAATACCTCTTCAGTTCC +
Preference number: 5 (lower is better)
Translates to: SHVHLGYTRCLCRGL*SPRTARAPKYLFSS
Trigger: GGAACTGAAGAGGTATTTTGGTGCTCGAGCGGTCCTGGGCGAGCAAAGGCCTCGACAGAGGCAGCGTGTGTATCCCAAGTGTACATGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS CCA 90 bp AGGGCAGCAACAGCCTCCTTGATCTCAGACAGTATCACGTGGCGGTaGATGTTTCTGGGCGCACGCTGGTACAACACTTTCCGCCTGTTC +
Preference number: 5 (lower is better)
Translates to: RAATASLISDSITWR*MFLGARWYNTFRLF
Trigger: GAACAGGCGGAAAGTGTTGTACCAGCGTGCGCCCAGAAACATCCACCGCCACGTGATACTGTCTGAGATCAAGGAGGCTGTTGCTGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
ENSMUST00000212880.2
CDS-3UTR CAA 90 bp CAGGCGGATCTCCGAGGCCAGCCTGGTCTACAGAGTAAAGGGCGGCCTGGTCTATGTTTAGCCCTTCCTTaGTTCCCTGATGACACAGAG +
Preference number: 5 (lower is better)
Translates to: QADLRGQPGLQSKGRPGLCLALP*FPDDTE
Trigger: CTCTGTGTCATCAGGGAACAAAGGAAGGGCTAAACA...TAGACCAGGCCGCCCTTTACTCTGTAGACCAGGCTGGCCTCGGAGATCCGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp TGTGTGGAAGGTTCAGGGGCCTCTAGCAAGGAGCAGATAGGGTCCTGGTACTGCATTGATAGACCTGGTTaGCTGTACCGGGGCCAGGTG +
Preference number: 5 (lower is better)
Translates to: CVEGSGASSKEQIGSWYCIDRPG*LYRGQV
Trigger: CACCTGGCCCCGGTACAGCAAACCAGGTCTATCAAT...GCAGTACCAGGACCCTATCTGCTCCTTGCTAGAGGCCCCTGAACCTTCCACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR CAA 90 bp GCCTGCAGGTGGGACGTTCCTGAAGGCCTGGGGTATCCTCTGCTTCACTGTTCCACAGCCACCAGGAACTaGTGCTGTGCTTGTTGGTAT +
Preference number: 5 (lower is better)
Translates to: ACRWDVPEGLGYPLLHCSTATRN*CCACWY
Trigger: ATACCAACAAGCACAGCACAAGTTCCTGGTGGCTGT...GGAACAGTGAAGCAGAGGATACCCCAGGCCTTCAGGAACGTCCCACCTGCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp TCAGGAAACAGGCCTGCAGGTGGGACGTTCCTGAAGGCCTGGGGTATCCTCTGCCATCTCTTGATCCTCTaGAAAGCGGCAGGCATCACT +
Preference number: 5 (lower is better)
Translates to: SGNRPAGGTFLKAWGILCHLLIL*KAAGIT
Trigger: AGTGATGCCTGCCGCTTTCAAGAGGATCAAGAGATG...GCAGAGGATACCCCAGGCCTTCAGGAACGTCCCACCTGCAGGCCTGTTTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp GCCTGCAGGTGGGACGTTCCTGAAGGCCTGGGGTATCCTCTGCTTCACTGTTCCCATCTCTTGATCCTCTaGAAAGCGGCAGGCATCACT +
Preference number: 5 (lower is better)
Translates to: ACRWDVPEGLGYPLLHCSHLLIL*KAAGIT
Trigger: AGTGATGCCTGCCGCTTTCAAGAGGATCAAGAGATG...GGAACAGTGAAGCAGAGGATACCCCAGGCCTTCAGGAACGTCCCACCTGCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp CTCAGGAAACAGGCCTGCAGGTGGGACGTTCCTGAAGGCCTGGGGTATCCTCTGCATCTCTTGATCCTCTaGAAAGCGGCAGGCATCACT +
Preference number: 5 (lower is better)
Translates to: LRKQACRWDVPEGLGYPLHLLIL*KAAGIT
Trigger: AGTGATGCCTGCCGCTTTCAAGAGGATCAAGAGATG...CAGAGGATACCCCAGGCCTTCAGGAACGTCCCACCTGCAGGCCTGTTTCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp GCCTGCAGGTGGGACGTTCCTGAAGGCCTGGGGTATCCTCTGCTTCACTGTTCCGCTCTGTGGTGTAATTaGGCAACAAGGACCGGAAGA +
Preference number: 5 (lower is better)
Translates to: ACRWDVPEGLGYPLLHCSALWCN*ATRTGR
Trigger: TCTTCCGGTCCTTGTTGCCAAATTACACCACAGAGC...GGAACAGTGAAGCAGAGGATACCCCAGGCCTTCAGGAACGTCCCACCTGCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000212470.2
ENSMUST00000212571.2
ENSMUST00000212880.2
CDS-3UTR CAA 90 bp CTCAGGAAACAGGCCTGCAGGTGGGACGTTCCTGAAGGCCTGGGGTATCCTCTGGCTCTGTGGTGTAATTaGGCAACAAGGACCGGAAGA +
Preference number: 5 (lower is better)
Translates to: LRKQACRWDVPEGLGYPLALWCN*ATRTGR
Trigger: TCTTCCGGTCCTTGTTGCCAAATTACACCACAGAGC...CAGAGGATACCCCAGGCCTTCAGGAACGTCCCACCTGCAGGCCTGTTTCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000212470.2
ENSMUST00000212571.2
ENSMUST00000212880.2
CDS GCA 90 bp CTGTTCTCACAGGCCTCCACAGCAGGGTCTCCAGCATCCACCGCTTaGAGAACCTCATGGACATTTTCCTCTAGCCAGCTCATAATGGCG +
Preference number: 5 (lower is better)
Translates to: LFSQASTAGSPASTA*RTSWTFSSSQLIMA
Trigger: CGCCATTATGAGCTGGCTAGAGGAAAATGTCCATGAGGTTCTGCAAGCGGTGGATGCTGGAGACCCTGCTGTGGAGGCCTGTGAGAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp AAGCTCCAGGCCACTACGGGCTACACAGTGAGACTCTGTCTCAGAAAGTTACTTCACCCAGCCCCGGTTTaGGTCCCTCTTCCTCTGCGT +
Preference number: 5 (lower is better)
Translates to: KLQATTGYTVRLCLRKLLHPAPV*VPLPLR
Trigger: ACGCAGAGGAAGAGGGACCAAAACCGGGGCTGGGTG...AAGTAACTTTCTGAGACAGAGTCTCACTGTGTAGCCCGTAGTGGCCTGGAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp CTCAGGAAACAGGCCTGCAGGTGGGACGTTCCTGAAGGCCTGGGGTATCCTCTGTGTTTAGCCCTTCCTTaGTTCCCTGATGACACAGAG +
Preference number: 5 (lower is better)
Translates to: LRKQACRWDVPEGLGYPLCLALP*FPDDTE
Trigger: CTCTGTGTCATCAGGGAACAAAGGAAGGGCTAAACA...CAGAGGATACCCCAGGCCTTCAGGAACGTCCCACCTGCAGGCCTGTTTCCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp CCATTCCTAGGCAGTCCTTCCTCCCCTTGGCTGAAACTCACCACAGGCCATTCCCTGAGAAGGCAAAATTaGGGAGCTGGGACAGGTTCC +
Preference number: 5 (lower is better)
Translates to: PFLGSPSSPWLKLTTGHSLRRQN*GAGTGS
Trigger: GGAACCTGTCCCAGCTCCCAAATTTTGCCTTCTCAG...GGAATGGCCTGTGGTGAGTTTCAGCCAAGGGGAGGAAGGACTGCCTAGGAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211932.2
CDS-3UTR CAA 90 bp CTGGGACTGTTTCTGAGGACACTGGAGGAAGCTCACCCAGAGTATAACCCACTCGGCACCTCCAGGTCGTaGAAGTGGAAGTTGGCCATC +
Preference number: 5 (lower is better)
Translates to: LGLFLRTLEEAHPEYNPLGTSRS*KWKLAI
Trigger: GATGGCCAACTTCCACTTCAACGACCTGGAGGTGCC...GAGTGGGTTATACTCTGGGTGAGCTTCCTCCAGTGTCCTCAGAAACAGTCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057934.10
CDS CCA 90 bp GCCTCCACAGCAGGGTCTCCAGCATCCACCGCTTGCAGAACCTCATaGACATTTTCCTCTAGCCAGCTCATAATGGCGGGTTCTTTCCAA +
Preference number: 5 (lower is better)
Translates to: ASTAGSPASTACRTS*TFSSSQLIMAGSFQ
Trigger: TTGGAAAGAACCCGCCATTATGAGCTGGCTAGAGGAAAATGTCCATGAGGTTCTGCAAGCGGTGGATGCTGGAGACCCTGCTGTGGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp CATAGCAAGCTCCAGGCCACTACGGGCTACACAGTGAGACTCTGTCTCAGAAAGGCCCCTCCATCTTGCTaGGTCTCTGCGTTTCCATGT +
Preference number: 5 (lower is better)
Translates to: HSKLQATTGYTVRLCLRKAPPSC*VSAFPC
Trigger: ACATGGAAACGCAGAGACCAAGCAAGATGGAGGGGC...CTTTCTGAGACAGAGTCTCACTGTGTAGCCCGTAGTGGCCTGGAGCTTGCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp GTGGAAGGTTCAGGGGCCTCTAGCAAGGAGCAGATAGGGTCCTGGTACTGCAGAAAAGAAAGGCCTTTCTaGGACTCCAGCAGCCGCATT +
Preference number: 5 (lower is better)
Translates to: VEGSGASSKEQIGSWYCRKERPF*DSSSRI
Trigger: AATGCGGCTGCTGGAGTCCAAGAAAGGCCTTTCTTT...TCTGCAGTACCAGGACCCTATCTGCTCCTTGCTAGAGGCCCCTGAACCTTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR CAA 90 bp AACACTTCTGAAGCCGATCATCTGATGGCCTCTCAGGAAACAGGCCTGCAGGTGAGGCTCAGGATGAGCTaGCAGTACTCCAGCGCAGTA +
Preference number: 5 (lower is better)
Translates to: NTSEADHLMASQETGLQVRLRMS*QYSSAV
Trigger: TACTGCGCTGGAGTACTGCAAGCTCATCCTGAGCCT...CACCTGCAGGCCTGTTTCCTGAGAGGCCATCAGATGATCGGCTTCAGAAGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp GTGGAAGGTTCAGGGGCCTCTAGCAAGGAGCAGATAGGGTCCTGGTACTGCAGACCTCTGTGGTGTAATTaGGCAACAAGGACCGGAAGA +
Preference number: 5 (lower is better)
Translates to: VEGSGASSKEQIGSWYCRPLWCN*ATRTGR
Trigger: TCTTCCGGTCCTTGTTGCCAAATTACACCACAGAGG...TCTGCAGTACCAGGACCCTATCTGCTCCTTGCTAGAGGCCCCTGAACCTTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR CAA 90 bp GTGGAAGGTTCAGGGGCCTCTAGCAAGGAGCAGATAGGGTCCTGGTACTGCAGATCGTTGAAGTGGAAGTaGGCCATCATGTCACGTACG +
Preference number: 5 (lower is better)
Translates to: VEGSGASSKEQIGSWYCRSLKWK*AIMSRT
Trigger: CGTACGTGACATGATGGCCAACTTCCACTTCAACGA...TCTGCAGTACCAGGACCCTATCTGCTCCTTGCTAGAGGCCCCTGAACCTTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057934.10
CDS GCA 90 bp CTTCTTTCGGAGTTTGCCACTTGCATTAGACTGTTCCGAGGACCCTaGTTTGGTGGCCCCTCCATCTTGCTTGGTCTCTGCGTTTCCATG +
Preference number: 5 (lower is better)
Translates to: LLSEFATCIRLFRGP*FGGPSILLGLCVSM
Trigger: CATGGAAACGCAGAGACCAAGCAAGATGGAGGGGCCACCAAAGCAGGGTCCTCGGAACAGTCTAATGCAAGTGGCAAACTCCGAAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212571.2
CDS GCA 90 bp ATCCAGCCTGCAAGTTCCACTGGTGAGACTGAACAAGGGGTGGAATaGACACTCCATGCTGTACAGGGCTCTCTCTATAAGGTCTCGAGC +
Preference number: 5 (lower is better)
Translates to: IQPASSTGETEQGVE*TLHAVQGSLYKVSS
Trigger: GCTCGAGACCTTATAGAGAGAGCCCTGTACAGCATGGAGTGTGCATTCCACCCCTTGTTCAGTCTCACCAGTGGAACTTGCAGGCTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS CCA 90 bp TGGCTCAAGGCTCAGGATGAGCTTGCAGTACTCCAGCGCAGTACGTaGGCATCCACGTTTCTCCAAGAAACTCATCTGCTTGTAGAGGGT +
Preference number: 5 (lower is better)
Translates to: WLKAQDELAVLQRST*ASTFLQETHLLVEG
Trigger: ACCCTCTACAAGCAGATGAGTTTCTTGGAGAAACGTGGATGCCCACGTACTGCGCTGGAGTACTGCAAGCTCATCCTGAGCCTTGAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp GCATGTGTGGAAGGTTCAGGGGCCTCTAGCAAGGAGCAGATAGGGTCCTGGTACTGTTTAGCCCTTCCTTaGTTCCCTGATGACACAGAG +
Preference number: 5 (lower is better)
Translates to: ACVEGSGASSKEQIGSWYCLALP*FPDDTE
Trigger: CTCTGTGTCATCAGGGAACAAAGGAAGGGCTAAACA...GTACCAGGACCCTATCTGCTCCTTGCTAGAGGCCCCTGAACCTTCCACACATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR CAA 90 bp AGCAAGCTCCAGGCCACTACGGGCTACACAGTGAGACTCTGTCTCAGAAAGTTAGCCCCTCCATCTTGCTaGGTCTCTGCGTTTCCATGT +
Preference number: 5 (lower is better)
Translates to: SKLQATTGYTVRLCLRKLAPPSC*VSAFPC
Trigger: ACATGGAAACGCAGAGACCAAGCAAGATGGAGGGGC...TAACTTTCTGAGACAGAGTCTCACTGTGTAGCCCGTAGTGGCCTGGAGCTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp TTAGGTGTGGTGGTGCACTCTTTTAATCCTAACATTTGGGAGACAGAGGCAGGCGGTGGCCCCTCCATCTaGCTTGGTCTCTGCGTTTCC +
Preference number: 5 (lower is better)
Translates to: LGVVVHSFNPNIWETEAGGGPSI*LGLCVS
Trigger: GGAAACGCAGAGACCAAGCAAGATGGAGGGGCCACC...GCCTGCCTCTGTCTCCCAAATGTTAGGATTAAAAGAGTGCACCACCACACCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp CTCAGGAAACAGGCCTGCAGGTGGGACGTTCCTGAAGGCCTGGGGTATCCTCTGTTCTTCTTTCGGAGTTaGCCACTTGCATTAGACTGT +
Preference number: 5 (lower is better)
Translates to: LRKQACRWDVPEGLGYPLFFFRS*PLALDC
Trigger: ACAGTCTAATGCAAGTGGCAAACTCCGAAAGAAGAA...CAGAGGATACCCCAGGCCTTCAGGAACGTCCCACCTGCAGGCCTGTTTCCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp CTCTCAGGAAACAGGCCTGCAGGTGGGACGTTCCTGAAGGCCTGGGGTATCCTCTTCTTCTTTCGGAGTTaGCCACTTGCATTAGACTGT +
Preference number: 5 (lower is better)
Translates to: LSGNRPAGGTFLKAWGILFFFRS*PLALDC
Trigger: ACAGTCTAATGCAAGTGGCAAACTCCGAAAGAAGAA...GAGGATACCCCAGGCCTTCAGGAACGTCCCACCTGCAGGCCTGTTTCCTGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp AATGACCAACAATTCTGCACAGAACACATAGGCAGGCGCCTCTTGGGAAAGGGGGTCAGCCATGTACACTaGGGATACACACGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: NDQQFCTEHIGRRLLGKGVSHVH*GYTRCL
Trigger: GAGGCAGCGTGTGTATCCCAAGTGTACATGGCTGAC...CCCCTTTCCCAAGAGGCGCCTGCCTATGTGTTCTGTGCAGAATTGTTGGTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp AACACTTCTGAAGCCGATCATCTGATGGCCTCTCAGGAAACAGGCCTGCAGGTGACTCCAGCAGCCGCATaGATAGACCTGGTTTGCTGT +
Preference number: 5 (lower is better)
Translates to: NTSEADHLMASQETGLQVTPAAA*IDLVCC
Trigger: ACAGCAAACCAGGTCTATCAATGCGGCTGCTGGAGT...CACCTGCAGGCCTGTTTCCTGAGAGGCCATCAGATGATCGGCTTCAGAAGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp CAGGCGGATCTCCGAGGCCAGCCTGGTCTACAGAGTAAAGGGCGGCCTGGTCTAGAACTTGTGCTGTGCTaGTTGGTATTCTTCATTATG +
Preference number: 5 (lower is better)
Translates to: QADLRGQPGLQSKGRPGLELVLC*LVFFIM
Trigger: CATAATGAAGAATACCAACAAGCACAGCACAAGTTC...TAGACCAGGCCGCCCTTTACTCTGTAGACCAGGCTGGCCTCGGAGATCCGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp ATGCTGGGTGTAGCATGTGTGGAAGGTTCAGGGGCCTCTAGCAAGGAGCAGATAGTCTCGAGCCATCTCTaGATCCTCTTGAAAGCGGCA +
Preference number: 5 (lower is better)
Translates to: MLGVACVEGSGASSKEQIVSSHL*ILLKAA
Trigger: TGCCGCTTTCAAGAGGATCAAGAGATGGCTCGAGAC...TATCTGCTCCTTGCTAGAGGCCCCTGAACCTTCCACACATGCTACACCCAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR CAA 90 bp GGCTACACAGTGAGACTCTGTCTCAGAAAGTTACTTTTCCCGATGATGATCCACCAGGAGGGAAGCCTGTaGCCTGGCAGAGCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: GYTVRLCLRKLLFPMMIHQEGSL*PGRAEL
Trigger: GAGCTCAGCTCTGCCAGGCAACAGGCTTCCCTCCTG...GTGGATCATCATCGGGAAAAGTAACTTTCTGAGACAGAGTCTCACTGTGTAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp CGCACTGCTTCTGGGACTGTTTCTGAGGACACTGGAGGAAGCTCACCCAGAGTACCTCTGTGGTGTAATTaGGCAACAAGGACCGGAAGA +
Preference number: 5 (lower is better)
Translates to: RTASGTVSEDTGGSSPRVPLWCN*ATRTGR
Trigger: TCTTCCGGTCCTTGTTGCCAAATTACACCACAGAGG...TACTCTGGGTGAGCTTCCTCCAGTGTCCTCAGAAACAGTCCCAGAAGCAGTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR CAA 90 bp ATGACATGCAGGTTAGGTGTGGTGGTGCACTCTTTTAATCCTAACATTTGGGAGCACCCAGCCCCGGTTTaGGTCCCTCTTCCTCTGCGT +
Preference number: 5 (lower is better)
Translates to: MTCRLGVVVHSFNPNIWEHPAPV*VPLPLR
Trigger: ACGCAGAGGAAGAGGGACCAAAACCGGGGCTGGGTG...CTCCCAAATGTTAGGATTAAAAGAGTGCACCACCACACCTAACCTGCATGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp AACACTTCTGAAGCCGATCATCTGATGGCCTCTCAGGAAACAGGCCTGCAGGTGACAGCCACCAGGAACTaGTGCTGTGCTTGTTGGTAT +
Preference number: 5 (lower is better)
Translates to: NTSEADHLMASQETGLQVTATRN*CCACWY
Trigger: ATACCAACAAGCACAGCACAAGTTCCTGGTGGCTGT...CACCTGCAGGCCTGTTTCCTGAGAGGCCATCAGATGATCGGCTTCAGAAGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp AGCAAGCTCCAGGCCACTACGGGCTACACAGTGAGACTCTGTCTCAGAAAGTTAGTCTCGAGCCATCTCTaGATCCTCTTGAAAGCGGCA +
Preference number: 5 (lower is better)
Translates to: SKLQATTGYTVRLCLRKLVSSHL*ILLKAA
Trigger: TGCCGCTTTCAAGAGGATCAAGAGATGGCTCGAGAC...TAACTTTCTGAGACAGAGTCTCACTGTGTAGCCCGTAGTGGCCTGGAGCTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp AACACTTCTGAAGCCGATCATCTGATGGCCTCTCAGGAAACAGGCCTGCAGGTGTGTTTAGCCCTTCCTTaGTTCCCTGATGACACAGAG +
Preference number: 5 (lower is better)
Translates to: NTSEADHLMASQETGLQVCLALP*FPDDTE
Trigger: CTCTGTGTCATCAGGGAACAAAGGAAGGGCTAAACA...CACCTGCAGGCCTGTTTCCTGAGAGGCCATCAGATGATCGGCTTCAGAAGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp AAGCTCCAGGCCACTACGGGCTACACAGTGAGACTCTGTCTCAGAAAGTTACTTACTCCAGCAGCCGCATaGATAGACCTGGTTTGCTGT +
Preference number: 5 (lower is better)
Translates to: KLQATTGYTVRLCLRKLLTPAAA*IDLVCC
Trigger: ACAGCAAACCAGGTCTATCAATGCGGCTGCTGGAGT...AAGTAACTTTCTGAGACAGAGTCTCACTGTGTAGCCCGTAGTGGCCTGGAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp AGCAAGCTCCAGGCCACTACGGGCTACACAGTGAGACTCTGTCTCAGAAAGTTAAAAGAAAGGCCTTTCTaGGACTCCAGCAGCCGCATT +
Preference number: 5 (lower is better)
Translates to: SKLQATTGYTVRLCLRKLKERPF*DSSSRI
Trigger: AATGCGGCTGCTGGAGTCCAAGAAAGGCCTTTCTTT...TAACTTTCTGAGACAGAGTCTCACTGTGTAGCCCGTAGTGGCCTGGAGCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp AATGACCAACAATTCTGCACAGAACACATAGGCAGGCGCCTCTTGGGAAAGGGGAAAGAAAGGCCTTTCTaGGACTCCAGCAGCCGCATT +
Preference number: 5 (lower is better)
Translates to: NDQQFCTEHIGRRLLGKGKERPF*DSSSRI
Trigger: AATGCGGCTGCTGGAGTCCAAGAAAGGCCTTTCTTT...CCCCTTTCCCAAGAGGCGCCTGCCTATGTGTTCTGTGCAGAATTGTTGGTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp AAGCTCCAGGCCACTACGGGCTACACAGTGAGACTCTGTCTCAGAAAGTTACTTCTGAGAAGGCAAAATTaGGGAGCTGGGACAGGTTCC +
Preference number: 5 (lower is better)
Translates to: KLQATTGYTVRLCLRKLLLRRQN*GAGTGS
Trigger: GGAACCTGTCCCAGCTCCCAAATTTTGCCTTCTCAG...AAGTAACTTTCTGAGACAGAGTCTCACTGTGTAGCCCGTAGTGGCCTGGAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS CCA 90 bp GATAGGGGCTTGTCTGGAGCAGAACCACAATGTTATTTGGCTCCATaGACTCCACAGCCACCAGGAACTTGTGCTGTGCTTGTTGGTATT +
Preference number: 5 (lower is better)
Translates to: DRGLSGAEPQCYLAP*TPQPPGTCAVLVGI
Trigger: AATACCAACAAGCACAGCACAAGTTCCTGGTGGCTGTGGAGTCCATGGAGCCAAATAACATTGTGGTTCTGCTCCAGACAAGCCCCTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp GGCTACACAGTGAGACTCTGTCTCAGAAAGTTACTTTTCCCGATGATGATCCACGCCCCTCCATCTTGCTaGGTCTCTGCGTTTCCATGT +
Preference number: 5 (lower is better)
Translates to: GYTVRLCLRKLLFPMMIHAPPSC*VSAFPC
Trigger: ACATGGAAACGCAGAGACCAAGCAAGATGGAGGGGC...GTGGATCATCATCGGGAAAAGTAACTTTCTGAGACAGAGTCTCACTGTGTAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp TCTTTCATTTCTTGTGAACTTTCTCTGAGAGGCAGCAAACAGGTTTTCTCCCTGGGTGGCCCCTCCATCTaGCTTGGTCTCTGCGTTTCC +
Preference number: 5 (lower is better)
Translates to: SFISCELSLRGSKQVFSLGGPSI*LGLCVS
Trigger: GGAAACGCAGAGACCAAGCAAGATGGAGGGGCCACC...CAGGGAGAAAACCTGTTTGCTGCCTCTCAGAGAAAGTTCACAAGAAATGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp CGCACTGCTTCTGGGACTGTTTCTGAGGACACTGGAGGAAGCTCACCCAGAGTATTCTTCTTTCGGAGTTaGCCACTTGCATTAGACTGT +
Preference number: 5 (lower is better)
Translates to: RTASGTVSEDTGGSSPRVFFFRS*PLALDC
Trigger: ACAGTCTAATGCAAGTGGCAAACTCCGAAAGAAGAA...TACTCTGGGTGAGCTTCCTCCAGTGTCCTCAGAAACAGTCCCAGAAGCAGTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR CAA 90 bp GTGAGACTCTGTCTCAGAAAGTTACTTTTCCCGATGATGATCCACAGGTGGTGTGTCAGCCATGTACACTaGGGATACACACGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: VRLCLRKLLFPMMIHRWCVSHVH*GYTRCL
Trigger: GAGGCAGCGTGTGTATCCCAAGTGTACATGGCTGAC...ACACCACCTGTGGATCATCATCGGGAAAAGTAACTTTCTGAGACAGAGTCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp GTGAGACTCTGTCTCAGAAAGTTACTTTTCCCGATGATGATCCACAGGTGGTGTATTGATAGACCTGGTTaGCTGTACCGGGGCCAGGTG +
Preference number: 5 (lower is better)
Translates to: VRLCLRKLLFPMMIHRWCIDRPG*LYRGQV
Trigger: CACCTGGCCCCGGTACAGCAAACCAGGTCTATCAAT...ACACCACCTGTGGATCATCATCGGGAAAAGTAACTTTCTGAGACAGAGTCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp TGGAGGAAGCTCACCCAGAGTATAACCCACTCCCTTCAGAGGGAAAACAAAAGAACTCCAGCAGCCGCATaGATAGACCTGGTTTGCTGT +
Preference number: 5 (lower is better)
Translates to: WRKLTQSITHSLQRENKRTPAAA*IDLVCC
Trigger: ACAGCAAACCAGGTCTATCAATGCGGCTGCTGGAGT...TCTTTTGTTTTCCCTCTGAAGGGAGTGGGTTATACTCTGGGTGAGCTTCCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR CAA 90 bp AAGCTCCAGGCCACTACGGGCTACACAGTGAGACTCTGTCTCAGAAAGTTACTTACAGCCACCAGGAACTaGTGCTGTGCTTGTTGGTAT +
Preference number: 5 (lower is better)
Translates to: KLQATTGYTVRLCLRKLLTATRN*CCACWY
Trigger: ATACCAACAAGCACAGCACAAGTTCCTGGTGGCTGT...AAGTAACTTTCTGAGACAGAGTCTCACTGTGTAGCCCGTAGTGGCCTGGAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp GGCTACACAGTGAGACTCTGTCTCAGAAAGTTACTTTTCCCGATGATGATCCACAGGCTCAGGATGAGCTaGCAGTACTCCAGCGCAGTA +
Preference number: 5 (lower is better)
Translates to: GYTVRLCLRKLLFPMMIHRLRMS*QYSSAV
Trigger: TACTGCGCTGGAGTACTGCAAGCTCATCCTGAGCCT...GTGGATCATCATCGGGAAAAGTAACTTTCTGAGACAGAGTCTCACTGTGTAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp GAGATGGGATCTCATATAACTCAGACTGGCTTTGAACTTAATTATGTAGCAGAGCACCCAGCCCCGGTTTaGGTCCCTCTTCCTCTGCGT +
Preference number: 5 (lower is better)
Translates to: EMGSHITQTGFELNYVAEHPAPV*VPLPLR
Trigger: ACGCAGAGGAAGAGGGACCAAAACCGGGGCTGGGTG...CTCTGCTACATAATTAAGTTCAAAGCCAGTCTGAGTTATATGAGATCCCATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR CAA 90 bp GTGAGACTCTGTCTCAGAAAGTTACTTTTCCCGATGATGATCCACAGGTGGTGTAGCTCAAACCGGTTGTaGACACGGACTCCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: VRLCLRKLLFPMMIHRWCSSNRL*TRTPSF
Trigger: GAAGGAAGGAGTCCGTGTCAACAACCGGTTTGAGCT...ACACCACCTGTGGATCATCATCGGGAAAAGTAACTTTCTGAGACAGAGTCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp CGCACTGCTTCTGGGACTGTTTCTGAGGACACTGGAGGAAGCTCACCCAGAGTAGAACTTGTGCTGTGCTaGTTGGTATTCTTCATTATG +
Preference number: 5 (lower is better)
Translates to: RTASGTVSEDTGGSSPRVELVLC*LVFFIM
Trigger: CATAATGAAGAATACCAACAAGCACAGCACAAGTTC...TACTCTGGGTGAGCTTCCTCCAGTGTCCTCAGAAACAGTCCCAGAAGCAGTGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR CAA 90 bp TGGAGGAAGCTCACCCAGAGTATAACCCACTCCCTTCAGAGGGAAAACAAAAGAACAGCCACCAGGAACTaGTGCTGTGCTTGTTGGTAT +
Preference number: 5 (lower is better)
Translates to: WRKLTQSITHSLQRENKRTATRN*CCACWY
Trigger: ATACCAACAAGCACAGCACAAGTTCCTGGTGGCTGT...TCTTTTGTTTTCCCTCTGAAGGGAGTGGGTTATACTCTGGGTGAGCTTCCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR CAA 90 bp CTGGGACTGTTTCTGAGGACACTGGAGGAAGCTCACCCAGAGTATAACCCACTCGAACTTGTGCTGTGCTaGTTGGTATTCTTCATTATG +
Preference number: 5 (lower is better)
Translates to: LGLFLRTLEEAHPEYNPLELVLC*LVFFIM
Trigger: CATAATGAAGAATACCAACAAGCACAGCACAAGTTC...GAGTGGGTTATACTCTGGGTGAGCTTCCTCCAGTGTCCTCAGAAACAGTCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR CAA 90 bp ATGGGATCTCATATAACTCAGACTGGCTTTGAACTTAATTATGTAGCAGAGGGTCAGCCTGTTCAAGCCTaGATTGCGGTTCGGACCCCC +
Preference number: 5 (lower is better)
Translates to: MGSHITQTGFELNYVAEGQPVQA*IAVRTP
Trigger: GGGGGTCCGAACCGCAATCAAGGCTTGAACAGGCTG...ACCCTCTGCTACATAATTAAGTTCAAAGCCAGTCTGAGTTATATGAGATCCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057934.10
CDS CCA 90 bp GGTATTCTTCATTATGGTCAAATGCAAAGAAAGAAAGGCCTTTCTTaGACTCCAGCAGCCGCATTGATAGACCTGGTTTGCTGTACCGGG +
Preference number: 5 (lower is better)
Translates to: GILHYGQMQRKKGLS*TPAAALIDLVCCTG
Trigger: CCCGGTACAGCAAACCAGGTCTATCAATGCGGCTGCTGGAGTCCAAGAAAGGCCTTTCTTTCTTTGCATTTGACCATAATGAAGAATACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS CCA 90 bp GGCTCCATGGACTCCACAGCCACCAGGAACTTGTGCTGTGCTTGTTaGTATTCTTCATTATGGTCAAATGCAAAGAAAGAAAGGCCTTTC +
Preference number: 5 (lower is better)
Translates to: GSMDSTATRNLCCAC*YSSLWSNAKKERPF
Trigger: GAAAGGCCTTTCTTTCTTTGCATTTGACCATAATGAAGAATACCAACAAGCACAGCACAAGTTCCTGGTGGCTGTGGAGTCCATGGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp TTTGAGATGGGATCTCATATAACTCAGACTGGCTTTGAACTTAATTATGTAGCACACCCAGCCCCGGTTTaGGTCCCTCTTCCTCTGCGT +
Preference number: 5 (lower is better)
Translates to: FEMGSHITQTGFELNYVAHPAPV*VPLPLR
Trigger: ACGCAGAGGAAGAGGGACCAAAACCGGGGCTGGGTG...TGCTACATAATTAAGTTCAAAGCCAGTCTGAGTTATATGAGATCCCATCTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS CCA 90 bp ACAGCCACCAGGAACTTGTGCTGTGCTTGTTGGTATTCTTCATTATaGTCAAATGCAAAGAAAGAAAGGCCTTTCTTGGACTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: TATRNLCCACWYSSL*SNAKKERPFLDSSS
Trigger: GCTGCTGGAGTCCAAGAAAGGCCTTTCTTTCTTTGCATTTGACCATAATGAAGAATACCAACAAGCACAGCACAAGTTCCTGGTGGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp ATGGGATCTCATATAACTCAGACTGGCTTTGAACTTAATTATGTAGCAGAGGGTGCCCCTCCATCTTGCTaGGTCTCTGCGTTTCCATGT +
Preference number: 5 (lower is better)
Translates to: MGSHITQTGFELNYVAEGAPPSC*VSAFPC
Trigger: ACATGGAAACGCAGAGACCAAGCAAGATGGAGGGGC...ACCCTCTGCTACATAATTAAGTTCAAAGCCAGTCTGAGTTATATGAGATCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR CAA 90 bp TTTGAGATGGGATCTCATATAACTCAGACTGGCTTTGAACTTAATTATGTAGCAGGTGGCCCCTCCATCTaGCTTGGTCTCTGCGTTTCC +
Preference number: 5 (lower is better)
Translates to: FEMGSHITQTGFELNYVAGGPSI*LGLCVS
Trigger: GGAAACGCAGAGACCAAGCAAGATGGAGGGGCCACC...TGCTACATAATTAAGTTCAAAGCCAGTCTGAGTTATATGAGATCCCATCTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR CAA 90 bp ATGGGATCTCATATAACTCAGACTGGCTTTGAACTTAATTATGTAGCAGAGGGTGTCAGCCATGTACACTaGGGATACACACGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: MGSHITQTGFELNYVAEGVSHVH*GYTRCL
Trigger: GAGGCAGCGTGTGTATCCCAAGTGTACATGGCTGAC...ACCCTCTGCTACATAATTAAGTTCAAAGCCAGTCTGAGTTATATGAGATCCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR CAA 90 bp GAGATGGGATCTCATATAACTCAGACTGGCTTTGAACTTAATTATGTAGCAGAGATTGATAGACCTGGTTaGCTGTACCGGGGCCAGGTG +
Preference number: 5 (lower is better)
Translates to: EMGSHITQTGFELNYVAEIDRPG*LYRGQV
Trigger: CACCTGGCCCCGGTACAGCAAACCAGGTCTATCAAT...CTCTGCTACATAATTAAGTTCAAAGCCAGTCTGAGTTATATGAGATCCCATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR CAA 90 bp TTCCCGATGATGATCCACAGGTGGTGTGAAGGACTGGTTTTATTTTTCACCATTCATCTCTTGATCCTCTaGAAAGCGGCAGGCATCACT +
Preference number: 5 (lower is better)
Translates to: FPMMIHRWCEGLVLFFTIHLLIL*KAAGIT
Trigger: AGTGATGCCTGCCGCTTTCAAGAGGATCAAGAGATG...AATGGTGAAAAATAAAACCAGTCCTTCACACCACCTGTGGATCATCATCGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp ATGGGATCTCATATAACTCAGACTGGCTTTGAACTTAATTATGTAGCAGAGGGTAGGCTCAGGATGAGCTaGCAGTACTCCAGCGCAGTA +
Preference number: 5 (lower is better)
Translates to: MGSHITQTGFELNYVAEGRLRMS*QYSSAV
Trigger: TACTGCGCTGGAGTACTGCAAGCTCATCCTGAGCCT...ACCCTCTGCTACATAATTAAGTTCAAAGCCAGTCTGAGTTATATGAGATCCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR CAA 90 bp ATGGGATCTCATATAACTCAGACTGGCTTTGAACTTAATTATGTAGCAGAGGGTAGCTCAAACCGGTTGTaGACACGGACTCCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: MGSHITQTGFELNYVAEGSSNRL*TRTPSF
Trigger: GAAGGAAGGAGTCCGTGTCAACAACCGGTTTGAGCT...ACCCTCTGCTACATAATTAAGTTCAAAGCCAGTCTGAGTTATATGAGATCCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR CAA 90 bp TTCCCGATGATGATCCACAGGTGGTGTGAAGGACTGGTTTTATTTTTCACCATTTGTTTAGCCCTTCCTTaGTTCCCTGATGACACAGAG +
Preference number: 5 (lower is better)
Translates to: FPMMIHRWCEGLVLFFTICLALP*FPDDTE
Trigger: CTCTGTGTCATCAGGGAACAAAGGAAGGGCTAAACA...AATGGTGAAAAATAAAACCAGTCCTTCACACCACCTGTGGATCATCATCGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS GCA 90 bp GTTATTTGGCTCCATGGACTCCACAGCCACCAGGAACTTGTGCTGTaGTTGTTGGTATTCTTCATTATGGTCAAATGCAAAGAAAGAAAG +
Preference number: 5 (lower is better)
Translates to: VIWLHGLHSHQELVL*LLVFFIMVKCKERK
Trigger: CTTTCTTTCTTTGCATTTGACCATAATGAAGAATACCAACAAGCACAGCACAAGTTCCTGGTGGCTGTGGAGTCCATGGAGCCAAATAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp ATGGGATCTCATATAACTCAGACTGGCTTTGAACTTAATTATGTAGCAGAGGGTAAAGAAAGGCCTTTCTaGGACTCCAGCAGCCGCATT +
Preference number: 5 (lower is better)
Translates to: MGSHITQTGFELNYVAEGKERPF*DSSSRI
Trigger: AATGCGGCTGCTGGAGTCCAAGAAAGGCCTTTCTTT...ACCCTCTGCTACATAATTAAGTTCAAAGCCAGTCTGAGTTATATGAGATCCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR CAA 90 bp TGCAGGTTAGGTGTGGTGGTGCACTCTTTTAATCCTAACATTTGGGAGACAGAGGAACTTGTGCTGTGCTaGTTGGTATTCTTCATTATG +
Preference number: 5 (lower is better)
Translates to: CRLGVVVHSFNPNIWETEELVLC*LVFFIM
Trigger: CATAATGAAGAATACCAACAAGCACAGCACAAGTTC...CTCTGTCTCCCAAATGTTAGGATTAAAAGAGTGCACCACCACACCTAACCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp GAGATGGGATCTCATATAACTCAGACTGGCTTTGAACTTAATTATGTAGCAGAGCATCTCTTGATCCTCTaGAAAGCGGCAGGCATCACT +
Preference number: 5 (lower is better)
Translates to: EMGSHITQTGFELNYVAEHLLIL*KAAGIT
Trigger: AGTGATGCCTGCCGCTTTCAAGAGGATCAAGAGATG...CTCTGCTACATAATTAAGTTCAAAGCCAGTCTGAGTTATATGAGATCCCATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS GCA 90 bp ACAATGTTATTTGGCTCCATGGACTCCACAGCCACCAGGAACTTGTaGTGTGCTTGTTGGTATTCTTCATTATGGTCAAATGCAAAGAAA +
Preference number: 5 (lower is better)
Translates to: TMLFGSMDSTATRNL*CACWYSSLWSNAKK
Trigger: TTTCTTTGCATTTGACCATAATGAAGAATACCAACAAGCACAGCACAAGTTCCTGGTGGCTGTGGAGTCCATGGAGCCAAATAACATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS-3UTR CAA 90 bp TTTGAGATGGGATCTCATATAACTCAGACTGGCTTTGAACTTAATTATGTAGCACTGAGAAGGCAAAATTaGGGAGCTGGGACAGGTTCC +
Preference number: 5 (lower is better)
Translates to: FEMGSHITQTGFELNYVALRRQN*GAGTGS
Trigger: GGAACCTGTCCCAGCTCCCAAATTTTGCCTTCTCAG...TGCTACATAATTAAGTTCAAAGCCAGTCTGAGTTATATGAGATCCCATCTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057934.10
ENSMUST00000211932.2
CDS-3UTR CAA 90 bp TTCCCGATGATGATCCACAGGTGGTGTGAAGGACTGGTTTTATTTTTCACCATTGAACTTGTGCTGTGCTaGTTGGTATTCTTCATTATG +
Preference number: 5 (lower is better)
Translates to: FPMMIHRWCEGLVLFFTIELVLC*LVFFIM
Trigger: CATAATGAAGAATACCAACAAGCACAGCACAAGTTC...AATGGTGAAAAATAAAACCAGTCCTTCACACCACCTGTGGATCATCATCGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212571.2
CDS CCA 72 bp AGGTACAGACTCACCAGCTGGCCCAAGGCGGGAGGCTaGCTGATCTCAGCATCCGGCCCAAAGAAGCGGTGG +
Preference number: 6 (lower is better)
Translates to: RYRLTSWPKAGG*LISASGPKKRW
Trigger: CCACCGCTTCTTTGGGCCGGATGCTGAGATCAGCCAGCCTCCCGCCTTGGGCCAGCTGGTGAGTCTGTACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS CAA 90 bp CTGTACCGGGGCCAGGTGCTCTTAGGGGTCGTCAGCCATGTACACTaGGGATACACACGCTGCCTCTGTCGAGGCCTTTGCTCGCCCAGG +
Preference number: 6 (lower is better)
Translates to: LYRGQVLLGVVSHVH*GYTRCLCRGLCSPR
Trigger: CCTGGGCGAGCAAAGGCCTCGACAGAGGCAGCGTGTGTATCCCAAGTGTACATGGCTGACGACCCCTAAGAGCACCTGGCCCCGGTACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS TCA 72 bp ACAGACTCACCAGCTGGCCCAAGGCGGGAGGCTGGCTaGTCTCAGCATCCGGCCCAAAGAAGCGGTGGTTTG +
Preference number: 6 (lower is better)
Translates to: TDSPAGPRREAG*SQHPAQRSGGL
Trigger: CAAACCACCGCTTCTTTGGGCCGGATGCTGAGATCAGCCAGCCTCCCGCCTTGGGCCAGCTGGTGAGTCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS GCA 72 bp GGGGTCGTCAGCCATGTACACTTGGGATACACACGCTaGCTCTGTCGAGGCCTTTGCTCGCCCAGGACCGCT +
Preference number: 6 (lower is better)
Translates to: GVVSHVHLGYTR*LCRGLCSPRTA
Trigger: AGCGGTCCTGGGCGAGCAAAGGCCTCGACAGAGGCAGCGTGTGTATCCCAAGTGTACATGGCTGACGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS GCA 72 bp CACTTGGGATACACACGCTGCCTCTGTCGAGGCCTTTaGTCGCCCAGGACCGCTCGAGCACCAAAATACCTC +
Preference number: 6 (lower is better)
Translates to: HLGYTRCLCRGL*SPRTARAPKYL
Trigger: GAGGTATTTTGGTGCTCGAGCGGTCCTGGGCGAGCAAAGGCCTCGACAGAGGCAGCGTGTGTATCCCAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS CAA 72 bp GGCCAGGTGCTCTTAGGGGTCGTCAGCCATGTACACTaGGGATACACACGCTGCCTCTGTCGAGGCCTTTGC +
Preference number: 6 (lower is better)
Translates to: GQVLLGVVSHVH*GYTRCLCRGLC
Trigger: GCAAAGGCCTCGACAGAGGCAGCGTGTGTATCCCAAGTGTACATGGCTGACGACCCCTAAGAGCACCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS CAA 72 bp AGGGGGTCCTCATCTGGCTCAAGGCTCAGGATGAGCTaGCAGTACTCCAGCGCAGTACGTGGGCATCCACGT +
Preference number: 6 (lower is better)
Translates to: RGSSSGSRLRMS*QYSSAVRGHPR
Trigger: ACGTGGATGCCCACGTACTGCGCTGGAGTACTGCAAGCTCATCCTGAGCCTTGAGCCAGATGAGGACCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS TCA 72 bp CAAGATCCTCCGTGTTTATCAGCTCAAACCGGTTGTTaGCACGGACTCCTTCCTTCCCTGCACCCCCGGGGC +
Preference number: 6 (lower is better)
Translates to: QDPPCLSAQTGC*HGLLPSLHPRG
Trigger: GCCCCGGGGGTGCAGGGAAGGAAGGAGTCCGTGTCAACAACCGGTTTGAGCTGATAAACACGGAGGATCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS GCA 72 bp CAGGCCTCCACAGCAGGGTCTCCAGCATCCACCGCTTaGAGAACCTCATGGACATTTTCCTCTAGCCAGCTC +
Preference number: 6 (lower is better)
Translates to: QASTAGSPASTA*RTSWTFSSSQL
Trigger: GAGCTGGCTAGAGGAAAATGTCCATGAGGTTCTGCAAGCGGTGGATGCTGGAGACCCTGCTGTGGAGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
ENSMUST00000212880.2
CDS CCA 72 bp AGTATCACGTGGCGGTGGATGTTTCTGGGCGCACGCTaGTACAACACTTTCCGCCTGTTCTCACAGGCCTCC +
Preference number: 6 (lower is better)
Translates to: SITWRWMFLGAR*YNTFRLFSQAS
Trigger: GGAGGCCTGTGAGAACAGGCGGAAAGTGTTGTACCAGCGTGCGCCCAGAAACATCCACCGCCACGTGATACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
ENSMUST00000212880.2
CDS CAA 72 bp ACACTTGGGATACACACGCTGCCTCTGTCGAGGCCTTaGCTCGCCCAGGACCGCTCGAGCACCAAAATACCT +
Preference number: 6 (lower is better)
Translates to: TLGIHTLPLSRP*LAQDRSSTKIP
Trigger: AGGTATTTTGGTGCTCGAGCGGTCCTGGGCGAGCAAAGGCCTCGACAGAGGCAGCGTGTGTATCCCAAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS CAA 90 bp CAGCCATGTACACTTGGGATACACACGCTGCCTCTGTCGAGGCCTTaGCTCGCCCAGGACCGCTCGAGCACCAAAATACCTCTTCAGTTC +
Preference number: 6 (lower is better)
Translates to: QPCTLGIHTLPLSRP*LAQDRSSTKIPLQF
Trigger: GAACTGAAGAGGTATTTTGGTGCTCGAGCGGTCCTGGGCGAGCAAAGGCCTCGACAGAGGCAGCGTGTGTATCCCAAGTGTACATGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS CAA 90 bp ACAGACTGTGTGGTCACATCCGAGGGTAGGGCAGCAACAGCCTCCTaGATCTCAGACAGTATCACGTGGCGGTGGATGTTTCTGGGCGCA +
Preference number: 6 (lower is better)
Translates to: TDCVVTSEGRAATAS*ISDSITWRWMFLGA
Trigger: TGCGCCCAGAAACATCCACCGCCACGTGATACTGTCTGAGATCAAGGAGGCTGTTGCTGCCCTACCCTCGGATGTGACCACACAGTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
ENSMUST00000212880.2
CDS CCA 72 bp GCAGCAACAGCCTCCTTGATCTCAGACAGTATCACGTaGCGGTGGATGTTTCTGGGCGCACGCTGGTACAAC +
Preference number: 6 (lower is better)
Translates to: AATASLISDSIT*RWMFLGARWYN
Trigger: GTTGTACCAGCGTGCGCCCAGAAACATCCACCGCCACGTGATACTGTCTGAGATCAAGGAGGCTGTTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
ENSMUST00000212880.2
CDS CAA 72 bp TCAAGATCCTCCGTGTTTATCAGCTCAAACCGGTTGTaGACACGGACTCCTTCCTTCCCTGCACCCCCGGGG +
Preference number: 6 (lower is better)
Translates to: SRSSVFISSNRL*TRTPSFPAPPG
Trigger: CCCCGGGGGTGCAGGGAAGGAAGGAGTCCGTGTCAACAACCGGTTTGAGCTGATAAACACGGAGGATCTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS TCA 72 bp CCATCTCTTGATCCTCTTGAAAGCGGCAGGCATCACTaGGCTGCAGCAGGGAGTCCACATGATAGGGGCTTG +
Preference number: 6 (lower is better)
Translates to: PSLDPLESGRHH*AAAGSPHDRGL
Trigger: CAAGCCCCTATCATGTGGACTCCCTGCTGCAGCTCAGTGATGCCTGCCGCTTTCAAGAGGATCAAGAGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS GCA 72 bp GAGTTTGCCACTTGCATTAGACTGTTCCGAGGACCCTaGTTTGGTGGCCCCTCCATCTTGCTTGGTCTCTGC +
Preference number: 6 (lower is better)
Translates to: EFATCIRLFRGP*FGGPSILLGLC
Trigger: GCAGAGACCAAGCAAGATGGAGGGGCCACCAAAGCAGGGTCCTCGGAACAGTCTAATGCAAGTGGCAAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212571.2
CDS CCA 72 bp GCAGGGTCTCCAGCATCCACCGCTTGCAGAACCTCATaGACATTTTCCTCTAGCCAGCTCATAATGGCGGGT +
Preference number: 6 (lower is better)
Translates to: AGSPASTACRTS*TFSSSQLIMAG
Trigger: ACCCGCCATTATGAGCTGGCTAGAGGAAAATGTCCATGAGGTTCTGCAAGCGGTGGATGCTGGAGACCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS CCA 72 bp GATTGTGTTTCCGTGGCTGACTGGACTCAGCCTCTCTaGTCTGACGTAAGAGTAGATGGTGTCCAGGGGAGG +
Preference number: 6 (lower is better)
Translates to: DCVSVADWTQPL*SDVRVDGVQGR
Trigger: CCTCCCCTGGACACCATCTACTCTTACGTCAGACCAGAGAGGCTGAGTCCAGTCAGCCACGGAAACACAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
ENSMUST00000212880.2
CDS CCA 72 bp CTAGTCCATTCTCCTGTTCCGAGGACCCTGCTTTGGTaGCCCCTCCATCTTGCTTGGTCTCTGCGTTTCCAT +
Preference number: 6 (lower is better)
Translates to: LVHSPVPRTLLW*PLHLAWSLRFH
Trigger: ATGGAAACGCAGAGACCAAGCAAGATGGAGGGGCCACCAAAGCAGGGTCCTCGGAACAGGAGAATGGACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212470.2
ENSMUST00000212569.2
CDS CCA 72 bp CTTCTAGTCCATTCTCCTGTTCCGAGGACCCTGCTTTaGTGGCCCCTCCATCTTGCTTGGTCTCTGCGTTTC +
Preference number: 6 (lower is better)
Translates to: LLVHSPVPRTLL*WPLHLAWSLRF
Trigger: GAAACGCAGAGACCAAGCAAGATGGAGGGGCCACCAAAGCAGGGTCCTCGGAACAGGAGAATGGACTAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212470.2
ENSMUST00000212569.2
CDS CAA 72 bp TCCTCAAGATCCTCCGTGTTTATCAGCTCAAACCGGTaGTTGACACGGACTCCTTCCTTCCCTGCACCCCCG +
Preference number: 6 (lower is better)
Translates to: SSRSSVFISSNR*LTRTPSFPAPP
Trigger: CGGGGGTGCAGGGAAGGAAGGAGTCCGTGTCAACAACCGGTTTGAGCTGATAAACACGGAGGATCTTGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS CAA 72 bp TCCGAGGACCCTGCTTTGGTGGCCCCTCCATCTTGCTaGGTCTCTGCGTTTCCATGTTTAGCCCTTCCTTTG +
Preference number: 6 (lower is better)
Translates to: SEDPALVAPPSC*VSAFPCLALPL
Trigger: CAAAGGAAGGGCTAAACATGGAAACGCAGAGACCAAGCAAGATGGAGGGGCCACCAAAGCAGGGTCCTCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS CAA 72 bp GTGGTCACATCCGAGGGTAGGGCAGCAACAGCCTCCTaGATCTCAGACAGTATCACGTGGCGGTGGATGTTT +
Preference number: 6 (lower is better)
Translates to: VVTSEGRAATAS*ISDSITWRWMF
Trigger: AAACATCCACCGCCACGTGATACTGTCTGAGATCAAGGAGGCTGTTGCTGCCCTACCCTCGGATGTGACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
ENSMUST00000212880.2
CDS CAA 90 bp GTACAGGGCTCTCTCTATAAGGTCTCGAGCCATCTCTTGATCCTCTaGAAAGCGGCAGGCATCACTGAGCTGCAGCAGGGAGTCCACATG +
Preference number: 6 (lower is better)
Translates to: VQGSLYKVSSHLLIL*KAAGITELQQGVHM
Trigger: CATGTGGACTCCCTGCTGCAGCTCAGTGATGCCTGCCGCTTTCAAGAGGATCAAGAGATGGCTCGAGACCTTATAGAGAGAGCCCTGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS CAA 90 bp CTCCATGCTGTACAGGGCTCTCTCTATAAGGTCTCGAGCCATCTCTaGATCCTCTTGAAAGCGGCAGGCATCACTGAGCTGCAGCAGGGA +
Preference number: 6 (lower is better)
Translates to: LHAVQGSLYKVSSHL*ILLKAAGITELQQG
Trigger: TCCCTGCTGCAGCTCAGTGATGCCTGCCGCTTTCAAGAGGATCAAGAGATGGCTCGAGACCTTATAGAGAGAGCCCTGTACAGCATGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS CCA 72 bp AGCCTGCAAGTTCCACTGGTGAGACTGAACAAGGGGTaGAATGCACACTCCATGCTGTACAGGGCTCTCTCT +
Preference number: 6 (lower is better)
Translates to: SLQVPLVRLNKG*NAHSMLYRALS
Trigger: AGAGAGAGCCCTGTACAGCATGGAGTGTGCATTCCACCCCTTGTTCAGTCTCACCAGTGGAACTTGCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS CCA 72 bp ACAGCCTCCTTGATCTCAGACAGTATCACGTGGCGGTaGATGTTTCTGGGCGCACGCTGGTACAACACTTTC +
Preference number: 6 (lower is better)
Translates to: TASLISDSITWR*MFLGARWYNTF
Trigger: GAAAGTGTTGTACCAGCGTGCGCCCAGAAACATCCACCGCCACGTGATACTGTCTGAGATCAAGGAGGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
ENSMUST00000212880.2
CDS CAA 72 bp TTGCCACTTGCATTAGACTGTTCCGAGGACCCTGCTTaGGTGGCCCCTCCATCTTGCTTGGTCTCTGCGTTT +
Preference number: 6 (lower is better)
Translates to: LPLALDCSEDPA*VAPPSCLVSAF
Trigger: AAACGCAGAGACCAAGCAAGATGGAGGGGCCACCAAAGCAGGGTCCTCGGAACAGTCTAATGCAAGTGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212571.2
CDS CAA 72 bp TCTTCTAGTCCATTCTCCTGTTCCGAGGACCCTGCTTaGGTGGCCCCTCCATCTTGCTTGGTCTCTGCGTTT +
Preference number: 6 (lower is better)
Translates to: SSSPFSCSEDPA*VAPPSCLVSAF
Trigger: AAACGCAGAGACCAAGCAAGATGGAGGGGCCACCAAAGCAGGGTCCTCGGAACAGGAGAATGGACTAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212470.2
ENSMUST00000212569.2
CDS CAA 90 bp TTCTCCTGTTCCGAGGACCCTGCTTTGGTGGCCCCTCCATCTTGCTaGGTCTCTGCGTTTCCATGTTTAGCCCTTCCTTTGTTCCCTGAT +
Preference number: 6 (lower is better)
Translates to: FSCSEDPALVAPPSC*VSAFPCLALPLFPD
Trigger: ATCAGGGAACAAAGGAAGGGCTAAACATGGAAACGCAGAGACCAAGCAAGATGGAGGGGCCACCAAAGCAGGGTCCTCGGAACAGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212470.2
ENSMUST00000212569.2
CDS CAA 72 bp TCTCTCTATAAGGTCTCGAGCCATCTCTTGATCCTCTaGAAAGCGGCAGGCATCACTGAGCTGCAGCAGGGA +
Preference number: 6 (lower is better)
Translates to: SLYKVSSHLLIL*KAAGITELQQG
Trigger: TCCCTGCTGCAGCTCAGTGATGCCTGCCGCTTTCAAGAGGATCAAGAGATGGCTCGAGACCTTATAGAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS CAA 72 bp GTACAGGGCTCTCTCTATAAGGTCTCGAGCCATCTCTaGATCCTCTTGAAAGCGGCAGGCATCACTGAGCTG +
Preference number: 6 (lower is better)
Translates to: VQGSLYKVSSHL*ILLKAAGITEL
Trigger: CAGCTCAGTGATGCCTGCCGCTTTCAAGAGGATCAAGAGATGGCTCGAGACCTTATAGAGAGAGCCCTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS CAA 90 bp TTAGACTGTTCCGAGGACCCTGCTTTGGTGGCCCCTCCATCTTGCTaGGTCTCTGCGTTTCCATGTTTAGCCCTTCCTTTGTTCCCTGAT +
Preference number: 6 (lower is better)
Translates to: LDCSEDPALVAPPSC*VSAFPCLALPLFPD
Trigger: ATCAGGGAACAAAGGAAGGGCTAAACATGGAAACGCAGAGACCAAGCAAGATGGAGGGGCCACCAAAGCAGGGTCCTCGGAACAGTCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212571.2
CDS CAA 90 bp GCTGACTCAGAAGGAAATAGGCCAGTGGAACTGAGAAGGCAAAATTaGGGAGCTGGGACAGGTTCCGATGAGCCTCCCATTCCTGGAAGA +
Preference number: 6 (lower is better)
Translates to: ADSEGNRPVELRRQN*GAGTGSDEPPIPGR
Trigger: TCTTCCAGGAATGGGAGGCTCATCGGAACCTGTCCCAGCTCCCAAATTTTGCCTTCTCAGTTCCACTGGCCTATTTCCTTCTGAGTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS CAA 90 bp CGATCGATGTCTTCTAGTCCATTCTCCTGTTCCGAGGACCCTGCTTaGGTGGCCCCTCCATCTTGCTTGGTCTCTGCGTTTCCATGTTTA +
Preference number: 6 (lower is better)
Translates to: RSMSSSPFSCSEDPA*VAPPSCLVSAFPCL
Trigger: TAAACATGGAAACGCAGAGACCAAGCAAGATGGAGGGGCCACCAAAGCAGGGTCCTCGGAACAGGAGAATGGACTAGAAGACATCGATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212470.2
ENSMUST00000212569.2
CDS GCA 72 bp GCAAGTTCCACTGGTGAGACTGAACAAGGGGTGGAATaGACACTCCATGCTGTACAGGGCTCTCTCTATAAG +
Preference number: 6 (lower is better)
Translates to: ASSTGETEQGVE*TLHAVQGSLYK
Trigger: CTTATAGAGAGAGCCCTGTACAGCATGGAGTGTGCATTCCACCCCTTGTTCAGTCTCACCAGTGGAACTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS CCA 72 bp TTGTCTGGAGCAGAACCACAATGTTATTTGGCTCCATaGACTCCACAGCCACCAGGAACTTGTGCTGTGCTT +
Preference number: 6 (lower is better)
Translates to: LSGAEPQCYLAP*TPQPPGTCAVL
Trigger: AAGCACAGCACAAGTTCCTGGTGGCTGTGGAGTCCATGGAGCCAAATAACATTGTGGTTCTGCTCCAGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS CAA 90 bp TGGTATTCTTCATTATGGTCAAATGCAAAGAAAGAAAGGCCTTTCTaGGACTCCAGCAGCCGCATTGATAGACCTGGTTTGCTGTACCGG +
Preference number: 6 (lower is better)
Translates to: WYSSLWSNAKKERPF*DSSSRIDRPGLLYR
Trigger: CCGGTACAGCAAACCAGGTCTATCAATGCGGCTGCTGGAGTCCAAGAAAGGCCTTTCTTTCTTTGCATTTGACCATAATGAAGAATACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS CAA 90 bp TGGCTCCATGGACTCCACAGCCACCAGGAACTTGTGCTGTGCTTGTaGGTATTCTTCATTATGGTCAAATGCAAAGAAAGAAAGGCCTTT +
Preference number: 6 (lower is better)
Translates to: WLHGLHSHQELVLCL*VFFIMVKCKERKAF
Trigger: AAAGGCCTTTCTTTCTTTGCATTTGACCATAATGAAGAATACCAACAAGCACAGCACAAGTTCCTGGTGGCTGTGGAGTCCATGGAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS CAA 90 bp ATTTGGCTCCATGGACTCCACAGCCACCAGGAACTTGTGCTGTGCTaGTTGGTATTCTTCATTATGGTCAAATGCAAAGAAAGAAAGGCC +
Preference number: 6 (lower is better)
Translates to: IWLHGLHSHQELVLC*LVFFIMVKCKERKA
Trigger: GGCCTTTCTTTCTTTGCATTTGACCATAATGAAGAATACCAACAAGCACAGCACAAGTTCCTGGTGGCTGTGGAGTCCATGGAGCCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS CAA 90 bp ACCACAATGTTATTTGGCTCCATGGACTCCACAGCCACCAGGAACTaGTGCTGTGCTTGTTGGTATTCTTCATTATGGTCAAATGCAAAG +
Preference number: 6 (lower is better)
Translates to: TTMLFGSMDSTATRN*CCACWYSSLWSNAK
Trigger: CTTTGCATTTGACCATAATGAAGAATACCAACAAGCACAGCACAAGTTCCTGGTGGCTGTGGAGTCCATGGAGCCAAATAACATTGTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS CAA 72 bp TCATTATGGTCAAATGCAAAGAAAGAAAGGCCTTTCTaGGACTCCAGCAGCCGCATTGATAGACCTGGTTTG +
Preference number: 6 (lower is better)
Translates to: SLWSNAKKERPF*DSSSRIDRPGL
Trigger: CAAACCAGGTCTATCAATGCGGCTGCTGGAGTCCAAGAAAGGCCTTTCTTTCTTTGCATTTGACCATAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS CAA 72 bp GGACTCCACAGCCACCAGGAACTTGTGCTGTGCTTGTaGGTATTCTTCATTATGGTCAAATGCAAAGAAAGA +
Preference number: 6 (lower is better)
Translates to: GLHSHQELVLCL*VFFIMVKCKER
Trigger: TCTTTCTTTGCATTTGACCATAATGAAGAATACCAACAAGCACAGCACAAGTTCCTGGTGGCTGTGGAGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS CAA 72 bp CATGGACTCCACAGCCACCAGGAACTTGTGCTGTGCTaGTTGGTATTCTTCATTATGGTCAAATGCAAAGAA +
Preference number: 6 (lower is better)
Translates to: HGLHSHQELVLC*LVFFIMVKCKE
Trigger: TTCTTTGCATTTGACCATAATGAAGAATACCAACAAGCACAGCACAAGTTCCTGGTGGCTGTGGAGTCCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2
CDS GCA 72 bp GTGCTGTGCTTGTTGGTATTCTTCATTATGGTCAAATaGAAAGAAAGAAAGGCCTTTCTTGGACTCCAGCAG +
Preference number: 6 (lower is better)
Translates to: VLCLLVFFIMVK*KERKAFLGLQQ
Trigger: CTGCTGGAGTCCAAGAAAGGCCTTTCTTTCTTTGCATTTGACCATAATGAAGAATACCAACAAGCACAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000057934.10
ENSMUST00000108840.4
ENSMUST00000211932.2
ENSMUST00000212470.2
ENSMUST00000212569.2
ENSMUST00000212571.2