Pregenerated sensors for TCF24 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000099032Ensembl transcript IDs: ENSMUST00000097824.3, ENSMUST00000185184.2
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAGGACCAGCCCCACCAAGTACAAGAAGGGCAGACATTCTGTGCGTaGCCAGGACAAGGGCACCGTGACTGGAGGTGTATTGGCCATGGT | + |
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Preference number: 1 (lower is better) Translates to: KDQPHQVQEGQTFCA*PGQGHRDWRCIGHG Trigger: ACCATGGCCAATACACCTCCAGTCACGGTGCCCTTGTCCTGGGCACGCACAGAATGTCTGCCCTTCTTGTACTTGGTGGGGCTGGTCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR GCA 90 bp | AAAGAGGCAGGATGGATATGGTGTTGCCAGAAGAGAGATGAACCCTaGCAGCCAGTGTCTCCTGAGCCTCTGCTCATACGGGCCTGCATG | + |
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Preference number: 1 (lower is better) Translates to: KEAGWIWCCQKRDEP*QPVSPEPLLIRACM Trigger: CATGCAGGCCCGTATGAGCAGAGGCTCAGGAGACACTGGCTGGCAGGGTTCATCTCTCTTCTGGCAACACCATATCCATCCTGCCTCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR GCA 90 bp | TATGGTCAGAAGAGAAGCTATCTCTGGGCCTGTGCTGGTGTGTGGTaGAGCAAGAAAGGGCAGCTGGTTCATCAAGGGGCAGACTCAAGC | + |
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Preference number: 1 (lower is better) Translates to: YGQKRSYLWACAGVW*SKKGQLVHQGADSS Trigger: GCTTGAGTCTGCCCCTTGATGAACCAGCTGCCCTTTCTTGCTGCACCACACACCAGCACAGGCCCAGAGATAGCTTCTCTTCTGACCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR CCA 90 bp | TGGTATGGTCAGAAGAGAAGCTATCTCTGGGCCTGTGCTGGTGTGTaGTGCAGCAAGAAAGGGCAGCTGGTTCATCAAGGGGCAGACTCA | + |
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Preference number: 1 (lower is better) Translates to: WYGQKRSYLWACAGV*CSKKGQLVHQGADS Trigger: TGAGTCTGCCCCTTGATGAACCAGCTGCCCTTTCTTGCTGCACCACACACCAGCACAGGCCCAGAGATAGCTTCTCTTCTGACCATACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR CCA 90 bp | AAACGGTTGGTATGGTCAGAAGAGAAGCTATCTCTGGGCCTGTGCTaGTGTGTGGTGCAGCAAGAAAGGGCAGCTGGTTCATCAAGGGGC | + |
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Preference number: 1 (lower is better) Translates to: KRLVWSEEKLSLGLC*CVVQQERAAGSSRG Trigger: GCCCCTTGATGAACCAGCTGCCCTTTCTTGCTGCACCACACACCAGCACAGGCCCAGAGATAGCTTCTCTTCTGACCATACCAACCGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR TCA 90 bp | GCTGAAGGCTTAGTGGTGGGCCTGACTGCAGATCAAAGAGAACACTaGCTGAGAGGAGACAGGAGCACTGTGAACTGGAGGGCAGTAAGA | + |
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Preference number: 1 (lower is better) Translates to: AEGLVVGLTADQREH*LRGDRSTVNWRAVR Trigger: TCTTACTGCCCTCCAGTTCACAGTGCTCCTGTCTCCTCTCAGTCAGTGTTCTCTTTGATCTGCAGTCAGGCCCACCACTAAGCCTTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR TCA 90 bp | AACATTCAGGAGTCAGTTCTCTCTTTCCAGGGTAGGTTGTGGGGCTaGACGCATCATGTCAGGCTCGGTGGCAAGCACCTTTACCCACTA | + |
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Preference number: 1 (lower is better) Translates to: NIQESVLSFQGRLWG*THHVRLGGKHLYPL Trigger: TAGTGGGTAAAGGTGCTTGCCACCGAGCCTGACATGATGCGTTCAGCCCCACAACCTACCCTGGAAAGAGAGAACTGACTCCTGAATGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR CCA 90 bp | TTGCTGAACACAAACGGTTGGTATGGTCAGAAGAGAAGCTATCTCTaGGCCTGTGCTGGTGTGTGGTGCAGCAAGAAAGGGCAGCTGGTT | + |
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Preference number: 1 (lower is better) Translates to: LLNTNGWYGQKRSYL*ACAGVWCSKKGQLV Trigger: AACCAGCTGCCCTTTCTTGCTGCACCACACACCAGCACAGGCCCAGAGATAGCTTCTCTTCTGACCATACCAACCGTTTGTGTTCAGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR GCA 90 bp | ACAGGCAGAACTCCCAAATCAGTGCTGAAAATGCCACTTCCTGGCTaGCTAACTATCCAGGCTGGGAAAAGAGGCAGGATGGATATGGTG | + |
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Preference number: 1 (lower is better) Translates to: TGRTPKSVLKMPLPG*LTIQAGKRGRMDMV Trigger: CACCATATCCATCCTGCCTCTTTTCCCAGCCTGGATAGTTAGGCAGCCAGGAAGTGGCATTTTCAGCACTGATTTGGGAGTTCTGCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR CCA 90 bp | ATCAGTGCTGAAAATGCCACTTCCTGGCTGCCTAACTATCCAGGCTaGGAAAAGAGGCAGGATGGATATGGTGTTGCCAGAAGAGAGATG | + |
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Preference number: 1 (lower is better) Translates to: ISAENATSWLPNYPG*EKRQDGYGVARREM Trigger: CATCTCTCTTCTGGCAACACCATATCCATCCTGCCTCTTTTCCCAGCCTGGATAGTTAGGCAGCCAGGAAGTGGCATTTTCAGCACTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR CCA 90 bp | GATCACAGGCAGAACTCCCAAATCAGTGCTGAAAATGCCACTTCCTaGCTGCCTAACTATCCAGGCTGGGAAAAGAGGCAGGATGGATAT | + |
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Preference number: 1 (lower is better) Translates to: DHRQNSQISAENATS*LPNYPGWEKRQDGY Trigger: ATATCCATCCTGCCTCTTTTCCCAGCCTGGATAGTTAGGCAGCCAGGAAGTGGCATTTTCAGCACTGATTTGGGAGTTCTGCCTGTGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR CCA 90 bp | CAAACTGATTTTCCAGTGACTCTTGCTGAACACAAACGGTTGGTATaGTCAGAAGAGAAGCTATCTCTGGGCCTGTGCTGGTGTGTGGTG | + |
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Preference number: 1 (lower is better) Translates to: QTDFPVTLAEHKRLV*SEEKLSLGLCWCVV Trigger: CACCACACACCAGCACAGGCCCAGAGATAGCTTCTCTTCTGACCATACCAACCGTTTGTGTTCAGCAAGAGTCACTGGAAAATCAGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR CAA 90 bp | CATTCTGTGCGTGCCCAGGACAAGGGCACCGTGACTGGAGGTGTATaGGCCATGGTGAGCAGACTGTACCTAAATGATACCAGAAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: HSVRAQDKGTVTGGV*AMVSRLYLNDTRSC Trigger: GCAGCTTCTGGTATCATTTAGGTACAGTCTGCTCACCATGGCCAATACACCTCCAGTCACGGTGCCCTTGTCCTGGGCACGCACAGAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR-3UTR TCA 90 bp | AAAATGCCACTTCCTGGCTGCCTAACTATCCAGGCTGGGAAAAGAGGCAGGATGTTGTCTCCACAATGCTaGGGACATGACAGTGAGCGT | + |
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Preference number: 2 (lower is better) Translates to: KMPLPGCLTIQAGKRGRMLSPQC*GHDSER Trigger: ACGCTCACTGTCATGTCCTCAGCATTGTGGAGACAA...CATCCTGCCTCTTTTCCCAGCCTGGATAGTTAGGCAGCCAGGAAGTGGCATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR-3UTR CCA 90 bp | GTATGGTCAGAAGAGAAGCTATCTCTGGGCCTGTGCTGGTGTGTGGTGCAGCAACCTGTCTCTGCATCTTaGAATGCTGGGGTTATAGAC | + |
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Preference number: 2 (lower is better) Translates to: VWSEEKLSLGLCWCVVQQPVSAS*NAGVID Trigger: GTCTATAACCCCAGCATTCCAAGATGCAGAGACAGG...TTGCTGCACCACACACCAGCACAGGCCCAGAGATAGCTTCTCTTCTGACCATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR CAA 90 bp | GCAGCCCAAACTGATTTTCCAGTGACTCTTGCTGAACACAAACGGTaGGTATGGTCAGAAGAGAAGCTATCTCTGGGCCTGTGCTGGTGT | + |
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Preference number: 2 (lower is better) Translates to: AAQTDFPVTLAEHKR*VWSEEKLSLGLCWC Trigger: ACACCAGCACAGGCCCAGAGATAGCTTCTCTTCTGACCATACCAACCGTTTGTGTTCAGCAAGAGTCACTGGAAAATCAGTTTGGGCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR-3UTR GCA 90 bp | TGGAGGTCAGAGGCCAACATTCAGGAGTCAGTTCTCTCTTTCCAGGGTAGGTTGGGATGGATATGGTGTTaGCAGAAGAGAGATGAACCC | + |
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Preference number: 2 (lower is better) Translates to: WRSEANIQESVLSFQGRLGWIWC*QKRDEP Trigger: GGGTTCATCTCTCTTCTGGCAACACCATATCCATCC...CAACCTACCCTGGAAAGAGAGAACTGACTCCTGAATGTTGGCCTCTGACCTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR-3UTR TCA 90 bp | GTTTTTAGAACCTTTGTAATGACAGGAAGTCAAAGCTCGTGTAATCAAAGTCAGCCAGCCAGTGTCTCCTaGGCCTCTGCTCATACGGGC | + |
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Preference number: 2 (lower is better) Translates to: VFRTFVMTGSQSSCNQSQPASVS*ASAHTG Trigger: GCCCGTATGAGCAGAGGCTCAGGAGACACTGGCTGG...CTGACTTTGATTACACGAGCTTTGACTTCCTGTCATTACAAAGGTTCTAAAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR-3UTR CCA 90 bp | TGGATATGGTGTTGCCAGAAGAGAGATGAACCCTGCCAGCCAGTGTCTCCTGAGTGGATGCAGCCTCTTTaGGATTGTTTTCAATCTTCT | + |
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Preference number: 2 (lower is better) Translates to: WIWCCQKRDEPCQPVSPEWMQPL*DCFQSS Trigger: AGAAGATTGAAAACAATCCCAAAGAGGCTGCATCCA...CTCAGGAGACACTGGCTGGCAGGGTTCATCTCTCTTCTGGCAACACCATATCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGGATGGATATGGTGTTGCCAGAAGAGAGATGAACCCTGCCAGCCAGTGTCTAATGAGAAATTCCAGTaGGAGAGCTTCATGAAGCAA | + |
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Preference number: 2 (lower is better) Translates to: AGWIWCCQKRDEPCQPVSNEKFQ*ESFMKQ Trigger: TTGCTTCATGAAGCTCTCCCACTGGAATTTCTCATT...AGACACTGGCTGGCAGGGTTCATCTCTCTTCTGGCAACACCATATCCATCCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCTCATGGTTCAGATCACAGGCAGAACTCCCAAATCAGTGCTGAAAATGCCACCTAACTATCCAGGCTaGGAAAAGAGGCAGGATGGA | + |
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Preference number: 2 (lower is better) Translates to: SLMVQITGRTPKSVLKMPPNYPG*EKRQDG Trigger: TCCATCCTGCCTCTTTTCCCAGCCTGGATAGTTAGG...TGGCATTTTCAGCACTGATTTGGGAGTTCTGCCTGTGATCTGAACCATGAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR-3UTR GCA 90 bp | AACCTGGCAAGGACCAGCCCCACCAAGTACAAGAAGGGCAGACATTCTGTGCGTTCCCTACTCCACAAATaGTATAAAATTATGGCCAAA | + |
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Preference number: 2 (lower is better) Translates to: NLARTSPTKYKKGRHSVRSLLHK*YKIMAK Trigger: TTTGGCCATAATTTTATAGCATTTGTGGAGTAGGGA...ACGCACAGAATGTCTGCCCTTCTTGTACTTGGTGGGGCTGGTCCTTGCCAGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR-3UTR GCA 90 bp | CCCAGTCATTGTCTCCACAATGCTGAGGACATGACAGTGAGCGTGGACACTGAGACACAAAGAGACAAGTaGACATTTGATAGACTAGTT | + |
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Preference number: 2 (lower is better) Translates to: PSHCLHNAEDMTVSVDTETQRDK*TFDRLV Trigger: AACTAGTCTATCAAATGTGCACTTGTCTCTTTGTGT...CTCAGTGTCCACGCTCACTGTCATGTCCTCAGCATTGTGGAGACAATGACTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097824.3 ENSMUST00000185184.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTGCCCTTTTGAACTTGTAGTTAAATGGATGCAGCCTCTTTGGGATTGTTTTAGATCTGCCTGTCTCTaGATCTTGGAATGCTGGGGT | + |
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Preference number: 2 (lower is better) Translates to: ACPFELVVKWMQPLWDCFRSACL*ILECWG Trigger: ACCCCAGCATTCCAAGATGCAGAGACAGGCAGATCT...AAAACAATCCCAAAGAGGCTGCATCCATTTAACTACAAGTTCAAAAGGGCAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGGTCAGAGGCCAACATTCAGGAGTCAGTTCTCTCTTTCCAGGGTAGGTTGTCCAACTCAAAGTACATaGTGGCTTTCACAAAAATTG | + |
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Preference number: 2 (lower is better) Translates to: GGQRPTFRSQFSLSRVGCPTQST*WLSQKL Trigger: CAATTTTTGTGAAAGCCAGCATGTACTTTGAGTTGG...ACAACCTACCCTGGAAAGAGAGAACTGACTCCTGAATGTTGGCCTCTGACCTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGCTCTGCTAACACTTTCTCTGCGTGTCCTTCCTTTATTACATTTATTTGTTGCCTGTGCTGGTGTGTaGTGCAGCAAGAAAGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: RALLTLSLRVLPLLHLFVACAGV*CSKKGQ Trigger: CTGCCCTTTCTTGCTGCACCACACACCAGCACAGGC...AACAAATAAATGTAATAAAGGAAGGACACGCAGAGAAAGTGTTAGCAGAGCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR-3UTR TCA 90 bp | TTCAACAAAAGTCCTATCTGTCCCTACTCCACAAATGCTATAAAATTATGGCCATTGCCAGAAGAGAGATaGACCCTGCCAGCCAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: FNKSPICPYSTNAIKLWPLPEER*TLPASV Trigger: GACACTGGCTGGCAGGGTTCATCTCTCTTCTGGCAA...TGGCCATAATTTTATAGCATTTGTGGAGTAGGGACAGATAGGACTTTTGTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR-3UTR CCA 90 bp | GCCTGCCCTTTTGAACTTGTAGTTAAATGGATGCAGCCTCTTTGGGATTGTTTTGAGGCAGGATGGATATaGTGTTGCCAGAAGAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: ACPFELVVKWMQPLWDCFEAGWI*CCQKRD Trigger: ATCTCTCTTCTGGCAACACCATATCCATCCTGCCTC...AAAACAATCCCAAAGAGGCTGCATCCATTTAACTACAAGTTCAAAAGGGCAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR-3UTR GCA 90 bp | GGCCATATGGGACTTCTGAGATTTTCCAACTTTGTAAATTCTGTTAGCATATTCAAGAGAGATGAACCCTaGCAGCCAGTGTCTCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: GHMGLLRFSNFVNSVSIFKRDEP*QPVSPE Trigger: CTCAGGAGACACTGGCTGGCAGGGTTCATCTCTCTT...GAATATGCTAACAGAATTTACAAAGTTGGAAAATCTCAGAAGTCCCATATGGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR-3UTR CCA 90 bp | TTCAACAAAAGTCCTATCTGTCCCTACTCCACAAATGCTATAAAATTATGGCCAAAGAGAAGCTATCTCTaGGCCTGTGCTGGTGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: FNKSPICPYSTNAIKLWPKRSYL*ACAGVW Trigger: CCACACACCAGCACAGGCCCAGAGATAGCTTCTCTT...TGGCCATAATTTTATAGCATTTGTGGAGTAGGGACAGATAGGACTTTTGTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR-3UTR GCA 90 bp | TTCAACAAAAGTCCTATCTGTCCCTACTCCACAAATGCTATAAAATTATGGCCAAGTGGTGGGCCTGACTaGAGATCAAAGAGAACACTG | + |
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Preference number: 2 (lower is better) Translates to: FNKSPICPYSTNAIKLWPSGGPD*RSKRTL Trigger: CAGTGTTCTCTTTGATCTGCAGTCAGGCCCACCACT...TGGCCATAATTTTATAGCATTTGTGGAGTAGGGACAGATAGGACTTTTGTTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR-3UTR CCA 90 bp | GTTTTTAGAACCTTTGTAATGACAGGAAGTCAAAGCTCGTGTAATCAAAGTCAGGAAAATGCCACTTCCTaGCTGCCTAACTATCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: VFRTFVMTGSQSSCNQSQENATS*LPNYPG Trigger: GCCTGGATAGTTAGGCAGCCAGGAAGTGGCATTTTC...CTGACTTTGATTACACGAGCTTTGACTTCCTGTCATTACAAAGGTTCTAAAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR-3UTR TCA 90 bp | CAACAAAAGTCCTATCTGTCCCTACTCCACAAATGCTATAAAATTATGGCCAAATCCAGTGACTCTTGCTaGACACAAACGGTTGGTATG | + |
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Preference number: 2 (lower is better) Translates to: QQKSYLSLLHKCYKIMAKSSDSC*TQTVGM Trigger: CATACCAACCGTTTGTGTTCAGCAAGAGTCACTGGA...TTTGGCCATAATTTTATAGCATTTGTGGAGTAGGGACAGATAGGACTTTTGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR-3UTR GCA 90 bp | TCTCTCATGGTTCAGATCACAGGCAGAACTCCCAAATCAGTGCTGAAAATGCCAACAGATAAAAGTTGCTaGAACAATTTTCACACACAC | + |
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Preference number: 2 (lower is better) Translates to: SLMVQITGRTPKSVLKMPTDKSC*NNFHTH Trigger: GTGTGTGTGAAAATTGTTGCAGCAACTTTTATCTGT...TGGCATTTTCAGCACTGATTTGGGAGTTCTGCCTGTGATCTGAACCATGAGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR-3UTR GCA 90 bp | CAACAAAAGTCCTATCTGTCCCTACTCCACAAATGCTATAAAATTATGGCCAAACTCTGCATCTTGGAATaGTGGGGTTATAGACATACC | + |
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Preference number: 2 (lower is better) Translates to: QQKSYLSLLHKCYKIMAKLCILE*WGYRHT Trigger: GGTATGTCTATAACCCCAGCATTCCAAGATGCAGAG...TTTGGCCATAATTTTATAGCATTTGTGGAGTAGGGACAGATAGGACTTTTGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR-3UTR CCA 90 bp | TTCAACAAAAGTCCTATCTGTCCCTACTCCACAAATGCTATAAAATTATGGCCATGCATCTTGGAATGCTaGGGTTATAGACATACCACC | + |
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Preference number: 2 (lower is better) Translates to: FNKSPICPYSTNAIKLWPCILEC*GYRHTT Trigger: GGTGGTATGTCTATAACCCCAGCATTCCAAGATGCA...TGGCCATAATTTTATAGCATTTGTGGAGTAGGGACAGATAGGACTTTTGTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR-3UTR CCA 90 bp | CAACAAAAGTCCTATCTGTCCCTACTCCACAAATGCTATAAAATTATGGCCAAACTATGTAGTCCTGGCTaGCCTCAAACTCTCTATGTA | + |
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Preference number: 2 (lower is better) Translates to: QQKSYLSLLHKCYKIMAKLCSPG*PQTLYV Trigger: TACATAGAGAGTTTGAGGCCAGCCAGGACTACATAG...TTTGGCCATAATTTTATAGCATTTGTGGAGTAGGGACAGATAGGACTTTTGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGCTCTGCTAACACTTTCTCTGCGTGTCCTTCCTTTATTACATTTATTTGTTCACAAACGGTTGGTATaGTCAGAAGAGAAGCTATCT | + |
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Preference number: 2 (lower is better) Translates to: RALLTLSLRVLPLLHLFVHKRLV*SEEKLS Trigger: AGATAGCTTCTCTTCTGACCATACCAACCGTTTGTG...AACAAATAAATGTAATAAAGGAAGGACACGCAGAGAAAGTGTTAGCAGAGCTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR-3UTR TCA 90 bp | GGCCATATGGGACTTCTGAGATTTTCCAACTTTGTAAATTCTGTTAGCATATTCAAACTGATTTTCCAGTaGCTCTTGCTGAACACAAAC | + |
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Preference number: 2 (lower is better) Translates to: GHMGLLRFSNFVNSVSIFKLIFQ*LLLNTN Trigger: GTTTGTGTTCAGCAAGAGTCACTGGAAAATCAGTTT...GAATATGCTAACAGAATTTACAAAGTTGGAAAATCTCAGAAGTCCCATATGGCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR-3UTR GCA 90 bp | AGGGTTTCTTGTGTAGATTATATGACCCAAATATCCCAGTCATTGTCTCCACAAACACAAAGAGACAAGTaGACATTTGATAGACTAGTT | + |
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Preference number: 2 (lower is better) Translates to: RVSCVDYMTQISQSLSPQTQRDK*TFDRLV Trigger: AACTAGTCTATCAAATGTGCACTTGTCTCTTTGTGT...TTGTGGAGACAATGACTGGGATATTTGGGTCATATAATCTACACAAGAAACCCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097824.3 ENSMUST00000185184.2 |
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| 3UTR CCA 72 bp | ACATTCTGTGCGTGCCCAGGACAAGGGCACCGTGACTaGAGGTGTATTGGCCATGGTGAGCAGACTGTACCT | + |
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Preference number: 3 (lower is better) Translates to: TFCACPGQGHRD*RCIGHGEQTVP Trigger: AGGTACAGTCTGCTCACCATGGCCAATACACCTCCAGTCACGGTGCCCTTGTCCTGGGCACGCACAGAATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR TCA 72 bp | GAGTCAGTTCTCTCTTTCCAGGGTAGGTTGTGGGGCTaGACGCATCATGTCAGGCTCGGTGGCAAGCACCTT | + |
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Preference number: 3 (lower is better) Translates to: ESVLSFQGRLWG*THHVRLGGKHL Trigger: AAGGTGCTTGCCACCGAGCCTGACATGATGCGTTCAGCCCCACAACCTACCCTGGAAAGAGAGAACTGACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR GCA 72 bp | GGATGGATATGGTGTTGCCAGAAGAGAGATGAACCCTaGCAGCCAGTGTCTCCTGAGCCTCTGCTCATACGG | + |
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Preference number: 3 (lower is better) Translates to: GWIWCCQKRDEP*QPVSPEPLLIR Trigger: CCGTATGAGCAGAGGCTCAGGAGACACTGGCTGGCAGGGTTCATCTCTCTTCTGGCAACACCATATCCATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR GCA 72 bp | AAGAGAAGCTATCTCTGGGCCTGTGCTGGTGTGTGGTaGAGCAAGAAAGGGCAGCTGGTTCATCAAGGGGCA | + |
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Preference number: 3 (lower is better) Translates to: KRSYLWACAGVW*SKKGQLVHQGA Trigger: TGCCCCTTGATGAACCAGCTGCCCTTTCTTGCTGCACCACACACCAGCACAGGCCCAGAGATAGCTTCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR CCA 72 bp | CAGAAGAGAAGCTATCTCTGGGCCTGTGCTGGTGTGTaGTGCAGCAAGAAAGGGCAGCTGGTTCATCAAGGG | + |
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Preference number: 3 (lower is better) Translates to: QKRSYLWACAGV*CSKKGQLVHQG Trigger: CCCTTGATGAACCAGCTGCCCTTTCTTGCTGCACCACACACCAGCACAGGCCCAGAGATAGCTTCTCTTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR-3UTR CAA 90 bp | ATCTCTGGGCCTGTGCTGGTGTGTGGTGCAGCAAGAAAGGGCAGCTGGTTCATCGCCTGTCTCTGCATCTaGGAATGCTGGGGTTATAGA | + |
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Preference number: 3 (lower is better) Translates to: ISGPVLVCGAARKGSWFIACLCI*ECWGYR Trigger: TCTATAACCCCAGCATTCCAAGATGCAGAGACAGGC...GATGAACCAGCTGCCCTTTCTTGCTGCACCACACACCAGCACAGGCCCAGAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR GCA 72 bp | TTGGTATGGTCAGAAGAGAAGCTATCTCTGGGCCTGTaGTGGTGTGTGGTGCAGCAAGAAAGGGCAGCTGGT | + |
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Preference number: 3 (lower is better) Translates to: LVWSEEKLSLGL*WCVVQQERAAG Trigger: ACCAGCTGCCCTTTCTTGCTGCACCACACACCAGCACAGGCCCAGAGATAGCTTCTCTTCTGACCATACCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR CCA 72 bp | GTATGGTCAGAAGAGAAGCTATCTCTGGGCCTGTGCTaGTGTGTGGTGCAGCAAGAAAGGGCAGCTGGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: VWSEEKLSLGLC*CVVQQERAAGS Trigger: TGAACCAGCTGCCCTTTCTTGCTGCACCACACACCAGCACAGGCCCAGAGATAGCTTCTCTTCTGACCATAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR CCA 72 bp | ACAAACGGTTGGTATGGTCAGAAGAGAAGCTATCTCTaGGCCTGTGCTGGTGTGTGGTGCAGCAAGAAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: TNGWYGQKRSYL*ACAGVWCSKKG Trigger: CCCTTTCTTGCTGCACCACACACCAGCACAGGCCCAGAGATAGCTTCTCTTCTGACCATACCAACCGTTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR TCA 72 bp | CTGGCCTCAAACTCTCTATGTAGAGCAGGCTGGCCTTaGACTCAGAGATCTGCCTGTCTCTGCATCTTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LASNSLCRAGWP*TQRSACLCILE Trigger: TTCCAAGATGCAGAGACAGGCAGATCTCTGAGTTCAAGGCCAGCCTGCTCTACATAGAGAGTTTGAGGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR GCA 72 bp | GAGATGAACCCTGCCAGCCAGTGTCTCCTGAGCCTCTaGTCATACGGGCCTGCATGGTTAGATCTTAATATT | + |
|
Preference number: 3 (lower is better) Translates to: EMNPASQCLLSL*SYGPAWLDLNI Trigger: AATATTAAGATCTAACCATGCAGGCCCGTATGAGCAGAGGCTCAGGAGACACTGGCTGGCAGGGTTCATCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR GCA 72 bp | ACTCCCAAATCAGTGCTGAAAATGCCACTTCCTGGCTaGCTAACTATCCAGGCTGGGAAAAGAGGCAGGATG | + |
|
Preference number: 3 (lower is better) Translates to: TPKSVLKMPLPG*LTIQAGKRGRM Trigger: CATCCTGCCTCTTTTCCCAGCCTGGATAGTTAGGCAGCCAGGAAGTGGCATTTTCAGCACTGATTTGGGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR CCA 72 bp | GGCCTTGAACTCAGAGATCTGCCTGTCTCTGCATCTTaGAATGCTGGGGTTATAGACATACCACCATGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: GLELRDLPVSAS*NAGVIDIPPCL Trigger: CAGACATGGTGGTATGTCTATAACCCCAGCATTCCAAGATGCAGAGACAGGCAGATCTCTGAGTTCAAGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR CCA 72 bp | TTTCCAGTGACTCTTGCTGAACACAAACGGTTGGTATaGTCAGAAGAGAAGCTATCTCTGGGCCTGTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: FPVTLAEHKRLV*SEEKLSLGLCW Trigger: CCAGCACAGGCCCAGAGATAGCTTCTCTTCTGACCATACCAACCGTTTGTGTTCAGCAAGAGTCACTGGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR TCA 72 bp | AGGTTGAATCTCCTAGCAGTAGGCTTGGCTGTCACCTaGTCTTTAACTTCACTGCCGCAGGCTATTGGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: RLNLLAVGLAVT*SLTSLPQAIGK Trigger: TTTTCCAATAGCCTGCGGCAGTGAAGTTAAAGATCAGGTGACAGCCAAGCCTACTGCTAGGAGATTCAACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR CCA 72 bp | ACTCAGAGATCTGCCTGTCTCTGCATCTTGGAATGCTaGGGTTATAGACATACCACCATGTCTGTTCCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: TQRSACLCILEC*GYRHTTMSVPS Trigger: ACTTGGAACAGACATGGTGGTATGTCTATAACCCCAGCATTCCAAGATGCAGAGACAGGCAGATCTCTGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR TCA 72 bp | AGGTGTATTGGCCATGGTGAGCAGACTGTACCTAAATaGTACCAGAAGCTGCAGAGAGTTCAACTTATGAAG | + |
|
Preference number: 3 (lower is better) Translates to: RCIGHGEQTVPK*YQKLQRVQLMK Trigger: CTTCATAAGTTGAACTCTCTGCAGCTTCTGGTATCATTTAGGTACAGTCTGCTCACCATGGCCAATACACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR CCA 72 bp | GTTTTTCAGTTTGTAACAGACAGTGTACGCATTGTCTaGGGGAGTACAACTCTATGCTTGTGTGTGTGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: VFQFVTDSVRIV*GSTTLCLCVCF Trigger: GAAACACACACACAAGCATAGAGTTGTACTCCCCCAGACAATGCGTACACTGTCTGTTACAAACTGAAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR-3UTR CAA 90 bp | GCCTGCCCTTTTGAACTTGTAGTTAAATGGATGCAGCCTCTTTGGGATTGTTTTGCAGCCTCTTTGGGATaGTTTTCAATCTTCTTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: ACPFELVVKWMQPLWDCFAASLG*FSIFLK Trigger: CTTTAAGAAGATTGAAAACAATCCCAAAGAGGCTGC...AAAACAATCCCAAAGAGGCTGCATCCATTTAACTACAAGTTCAAAAGGGCAGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000097824.3 ENSMUST00000185184.2 |
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| 3UTR-3UTR CAA 90 bp | TTCAACAAAAGTCCTATCTGTCCCTACTCCACAAATGCTATAAAATTATGGCCAGCAGCCTCTTTGGGATaGTTTTCAATCTTCTTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: FNKSPICPYSTNAIKLWPAASLG*FSIFLK Trigger: CTTTAAGAAGATTGAAAACAATCCCAAAGAGGCTGC...TGGCCATAATTTTATAGCATTTGTGGAGTAGGGACAGATAGGACTTTTGTTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000097824.3 ENSMUST00000185184.2 |
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| 3UTR-3UTR CAA 90 bp | TTCAACAAAAGTCCTATCTGTCCCTACTCCACAAATGCTATAAAATTATGGCCATTAACTGAGGGTTTCTaGTGTAGATTATATGACCCA | + |
|
Preference number: 3 (lower is better) Translates to: FNKSPICPYSTNAIKLWPLTEGF*CRLYDP Trigger: TGGGTCATATAATCTACACAAGAAACCCTCAGTTAA...TGGCCATAATTTTATAGCATTTGTGGAGTAGGGACAGATAGGACTTTTGTTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097824.3 ENSMUST00000185184.2 |
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| 3UTR GCA 72 bp | ATTCAACAAAAGTCCTATCTGTCCCTACTCCACAAATaGTATAAAATTATGGCCAAACTAATAGGTTGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: IQQKSYLSLLHK*YKIMAKLIGWH Trigger: ATGCCAACCTATTAGTTTGGCCATAATTTTATAGCATTTGTGGAGTAGGGACAGATAGGACTTTTGTTGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097824.3 ENSMUST00000185184.2 |
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| CDS-3UTR TCA 90 bp | AAAATGCCACTTCCTGGCTGCCTAACTATCCAGGCTGGGAAAAGAGGCAGGATGCCTGCAGGCTGCGGGTaGGGTGGGCGATGTAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KMPLPGCLTIQAGKRGRMPAGCG*GGRCRW Trigger: CCACCTACATCGCCCACCTCACCCGCAGCCTGCAGG...CATCCTGCCTCTTTTCCCAGCCTGGATAGTTAGGCAGCCAGGAAGTGGCATTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| CDS-3UTR CCA 90 bp | ACTATCCAGGCTGGGAAAAGAGGCAGGATGGATATGGTGTTGCCAGAAGAGAGAGGACAGCTTGGTGTCTaGCGGCACCGACGGCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: TIQAGKRGRMDMVLPEERGQLGV*RHRRQR Trigger: ACGCTGCCGTCGGTGCCGCCAGACACCAAGCTGTCC...TCTCTCTTCTGGCAACACCATATCCATCCTGCCTCTTTTCCCAGCCTGGATAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| CDS-3UTR GCA 90 bp | GCCTGCCCTTTTGAACTTGTAGTTAAATGGATGCAGCCTCTTTGGGATTGTTTTGCACCGACGGCAGCGTaGGCTGCAGCTCCAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ACPFELVVKWMQPLWDCFAPTAA*AAAPGR Trigger: CCTTCCTGGAGCTGCAGCGCACGCTGCCGTCGGTGC...AAAACAATCCCAAAGAGGCTGCATCCATTTAACTACAAGTTCAAAAGGGCAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| CDS-3UTR GCA 90 bp | GTATGGTCAGAAGAGAAGCTATCTCTGGGCCTGTGCTGGTGTGTGGTGCAGCAAAGTGTTGCTATGGCTTaGCTTTTCTCCAGAGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: VWSEEKLSLGLCWCVVQQSVAMA*LFSRDR Trigger: TCTGTCTCTGGAGAAAAGGCAAGCCATAGCAACACT...TTGCTGCACCACACACCAGCACAGGCCCAGAGATAGCTTCTCTTCTGACCATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| CDS-3UTR CCA 90 bp | TTATCTGTGTCTGTAGACTCTCTCATGGTTCAGATCACAGGCAGAACTCCCAAAGGGCCACTTCTTAACTaGGTGCAGATAGCCGTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LSVSVDSLMVQITGRTPKGPLLN*VQIAVA Trigger: GGCGACGGCTATCTGCACCCAGTTAAGAAGTGGCCC...TTTGGGAGTTCTGCCTGTGATCTGAACCATGAGAGAGTCTACAGACACAGATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| CDS-3UTR GCA 90 bp | AACAAAAGTCCTATCTGTCCCTACTCCACAAATGCTATAAAATTATGGCCAAACGACGGCAGCGTGCGCTaGAGCTCCAGGAAGGCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NKSPICPYSTNAIKLWPNDGSVR*SSRKAC Trigger: ACACGCCTTCCTGGAGCTGCAGCGCACGCTGCCGTC...GTTTGGCCATAATTTTATAGCATTTGTGGAGTAGGGACAGATAGGACTTTTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| CDS-3UTR GCA 90 bp | AAAGAATTAACTGAGGGTTTCTTGTGTAGATTATATGACCCAAATATCCCAGTCGCGTCGGTGTCGTCCTaGAGGCTGCGGGTGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KELTEGFLCRLYDPNIPVASVSS*RLRVRW Trigger: CCACCTCACCCGCAGCCTGCAGGACGACACCGACGC...GACTGGGATATTTGGGTCATATAATCTACACAAGAAACCCTCAGTTAATTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| CDS-3UTR CCA 90 bp | TTATCTGTGTCTGTAGACTCTCTCATGGTTCAGATCACAGGCAGAACTCCCAAAGTTGAAGTGTTGCTATaGCTTGCCTTTTCTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSVSVDSLMVQITGRTPKVEVLL*LAFSPE Trigger: CTCTGGAGAAAAGGCAAGCCATAGCAACACTTCAAC...TTTGGGAGTTCTGCCTGTGATCTGAACCATGAGAGAGTCTACAGACACAGATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| CDS-3UTR TCA 90 bp | AACAAAAGTCCTATCTGTCCCTACTCCACAAATGCTATAAAATTATGGCCAAACACCGATATACAGTCTTaGTCGCATGGGCCACTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NKSPICPYSTNAIKLWPNTDIQS*SHGPLL Trigger: AAGAAGTGGCCCATGCGATCAAGACTGTATATCGGT...GTTTGGCCATAATTTTATAGCATTTGTGGAGTAGGGACAGATAGGACTTTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| CDS-3UTR CCA 90 bp | CAACAAAAGTCCTATCTGTCCCTACTCCACAAATGCTATAAAATTATGGCCAAATTTCTTCAAATAACCTaGCAAGGACCAGCCCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: QQKSYLSLLHKCYKIMAKFLQIT*QGPAPP Trigger: TGGTGGGGCTGGTCCTTGCCAGGTTATTTGAAGAAA...TTTGGCCATAATTTTATAGCATTTGTGGAGTAGGGACAGATAGGACTTTTGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097824.3 |
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| CDS-3UTR GCA 90 bp | AAAGAATTAACTGAGGGTTTCTTGTGTAGATTATATGACCCAAATATCCCAGTCAGGCCGTTGAAGTGTTaGTATGGCTTGCCTTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KELTEGFLCRLYDPNIPVRPLKC*YGLPFL Trigger: GAGAAAAGGCAAGCCATAGCAACACTTCAACGGCCT...GACTGGGATATTTGGGTCATATAATCTACACAAGAAACCCTCAGTTAATTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| 3UTR CAA 72 bp | GAGCTTCATGAAGCAAAAGAATTAACTGAGGGTTTCTaGTGTAGATTATATGACCCAAATATCCCAGTCATT | + |
|
Preference number: 4 (lower is better) Translates to: ELHEAKELTEGF*CRLYDPNIPVI Trigger: AATGACTGGGATATTTGGGTCATATAATCTACACAAGAAACCCTCAGTTAATTCTTTTGCTTCATGAAGCTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097824.3 ENSMUST00000185184.2 |
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| CDS TCA 90 bp | TCGCGGCGGCTGGACGGCCACCCCCGGAGCGCGCCGCGACCCCGCTaGGGCCTGTTGGCCCGGTCCCGGTCGGTCCTGGGCTCCAGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: SRRLDGHPRSAPRPR*GLLARSRSVLGSSR Trigger: GCGACTGGAGCCCAGGACCGACCGGGACCGGGCCAACAGGCCTCAGCGGGGTCGCGGCGCGCTCCGGGGGTGGCCGTCCAGCCGCCGCGA 80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| CDS-3UTR CAA 90 bp | AACCTGGCAAGGACCAGCCCCACCAAGTACAAGAAGGGCAGACATTCTGTGCGTGGCGTGTCGCAGGGTTaGCACTCGGCTGCGCTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: NLARTSPTKYKKGRHSVRGVSQG*HSAALP Trigger: CGGGAGCGCAGCCGAGTGCAAACCCTGCGACACGCC...ACGCACAGAATGTCTGCCCTTCTTGTACTTGGTGGGGCTGGTCCTTGCCAGGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| CDS TCA 90 bp | GACAGAATGTTTCAGAAACTGACCAGTCGCACCGATATACAGTCTTaGTCGCATGGGCCACTTCTTAACTGGGTGCAGATAGCCGTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: DRMFQKLTSRTDIQS*SHGPLLNWVQIAVA Trigger: GGCGACGGCTATCTGCACCCAGTTAAGAAGTGGCCCATGCGATCAAGACTGTATATCGGTGCGACTGGTCAGTTTCTGAAACATTCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| CDS-3UTR CAA 90 bp | GGAGGTCAGAGGCCAACATTCAGGAGTCAGTTCTCTCTTTCCAGGGTAGGTTGTCACCGATATACAGTCTaGATCGCATGGGCCACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GGQRPTFRSQFSLSRVGCHRYTV*IAWATS Trigger: AGAAGTGGCCCATGCGATCAAGACTGTATATCGGTG...ACAACCTACCCTGGAAAGAGAGAACTGACTCCTGAATGTTGGCCTCTGACCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| CDS-3UTR CAA 90 bp | AGAGCTCTGCTAACACTTTCTCTGCGTGTCCTTCCTTTATTACATTTATTTGTTAAGTGTTGCTATGGCTaGCCTTTTCTCCAGAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: RALLTLSLRVLPLLHLFVKCCYG*PFLQRQ Trigger: CTGTCTCTGGAGAAAAGGCAAGCCATAGCAACACTT...AACAAATAAATGTAATAAAGGAAGGACACGCAGAGAAAGTGTTAGCAGAGCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| CDS-3UTR CAA 90 bp | GTTCAAGCTACACAAAGAGACAAGTGCACATTTGATAGACTAGTTTTCAAATTGAACTTTAAAGAACGTTaGACAGTTTCACATCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VQATQRDKCTFDRLVFKLNFKER*TVSHLA Trigger: GGCCAGATGTGAAACTGTCAAACGTTCTTTAAAGTT...CAATTTGAAAACTAGTCTATCAAATGTGCACTTGTCTCTTTGTGTAGCTTGAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097824.3 |
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| CDS TCA 72 bp | CTCCGGGCGCGTCGGTGTCGTCCTGCAGGCTGCGGGTaGGGTGGGCGATGTAGGTGGTGGCCAGCAGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LRARRCRPAGCG*GGRCRWWPAAA Trigger: TGCTGCTGCTGGCCACCACCTACATCGCCCACCTCACCCGCAGCCTGCAGGACGACACCGACGCGCCCGGAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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| CDS TCA 72 bp | TTTCAGAAACTGACCAGTCGCACCGATATACAGTCTTaGTCGCATGGGCCACTTCTTAACTGGGTGCAGATA | + |
|
Preference number: 6 (lower is better) Translates to: FQKLTSRTDIQS*SHGPLLNWVQI Trigger: TATCTGCACCCAGTTAAGAAGTGGCCCATGCGATCAAGACTGTATATCGGTGCGACTGGTCAGTTTCTGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185184.2 |
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