Pregenerated sensors for TCF23 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006642Ensembl transcript IDs: ENSMUST00000006818.4
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGCAACAGGGAAATCTCCCTCTTCACTCTACCTGCACCTCACCCTaGGAGGGACAGGAAGAAAACTGGACTAGGGTCACAGGGGCCACC | + |
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Preference number: 1 (lower is better) Translates to: GQQGNLPLHSTCTSP*EGQEENWTRVTGAT Trigger: GGTGGCCCCTGTGACCCTAGTCCAGTTTTCTTCCTGTCCCTCTCAGGGTGAGGTGCAGGTAGAGTGAAGAGGGAGATTTCCCTGTTGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR GCA 90 bp | CAGGTACCCAAAGCCAGTCCCCAGCCTGCCCAGACACAGATCGTATaGTACCGACTGGGAAGAAATCATGCCCGCTCCTTTTTACCACCC | + |
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Preference number: 1 (lower is better) Translates to: QVPKASPQPAQTQIV*YRLGRNHARSFLPP Trigger: GGGTGGTAAAAAGGAGCGGGCATGATTTCTTCCCAGTCGGTAGCATACGATCTGTGTCTGGGCAGGCTGGGGACTGGCTTTGGGTACCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR GCA 90 bp | GCTATGAGCAGACTCCCAGCAGGTACCCAAAGCCAGTCCCCAGCCTaGCCAGACACAGATCGTATGCTACCGACTGGGAAGAAATCATGC | + |
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Preference number: 1 (lower is better) Translates to: AMSRLPAGTQSQSPA*PDTDRMLPTGKKSC Trigger: GCATGATTTCTTCCCAGTCGGTAGCATACGATCTGTGTCTGGGCAGGCTGGGGACTGGCTTTGGGTACCTGCTGGGAGTCTGCTCATAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR TCA 90 bp | ATTTCCCTGGATTGTCAGCCATGTAAGTCTGGGGGCTTCATCTGCTaGAATGTGAAAGGCAGCAGGGCCCTGGTGCAGGAAGGCGGTGAC | + |
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Preference number: 1 (lower is better) Translates to: ISLDCQPCKSGGFIC*NVKGSRALVQEGGD Trigger: GTCACCGCCTTCCTGCACCAGGGCCCTGCTGCCTTTCACATTTCAGCAGATGAAGCCCCCAGACTTACATGGCTGACAATCCAGGGAAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR GCA 90 bp | GCCTGCCCAGACACAGATCGTATGCTACCGACTGGGAAGAAATCATaGCCGCTCCTTTTTACCACCCTCCAACTCAACCAGGGAGATGCT | + |
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Preference number: 1 (lower is better) Translates to: ACPDTDRMLPTGKKS*PLLFTTLQLNQGDA Trigger: AGCATCTCCCTGGTTGAGTTGGAGGGTGGTAAAAAGGAGCGGGCATGATTTCTTCCCAGTCGGTAGCATACGATCTGTGTCTGGGCAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR GCA 90 bp | AGCAAAACACCCTTCCTGGTGGGACTTGTTCTTTACCTGGCCCTCTaGCAACTTCATCCTCCTTTCCCTCCTCAGATTCTCCACCGGGGT | + |
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Preference number: 1 (lower is better) Translates to: SKTPFLVGLVLYLAL*QLHPPFPPQILHRG Trigger: ACCCCGGTGGAGAATCTGAGGAGGGAAAGGAGGATGAAGTTGGCAGAGGGCCAGGTAAAGAACAAGTCCCACCAGGAAGGGTGTTTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR GCA 90 bp | TACTGCCTCCCCACCACAGGCGAGCATAGAACTCCAGTCAGCAGGTaGTCTTCTTCCTCTGCTGTGGAAACAAAGGGATCCATTCCTGGT | + |
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Preference number: 1 (lower is better) Translates to: YCLPTTGEHRTPVSR*SSSSAVETKGSIPG Trigger: ACCAGGAATGGATCCCTTTGTTTCCACAGCAGAGGAAGAAGAGCACCTGCTGACTGGAGTTCTATGCTCGCCTGTGGTGGGGAGGCAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR CCA 90 bp | AAGGCAGCAGGGCCCTGGTGCAGGAAGGCGGTGACAAGGGACCACTaGAGAGACCATATTCCAGAGAGAAGGACTCTAAACTCTTTGATG | + |
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Preference number: 1 (lower is better) Translates to: KAAGPWCRKAVTRDH*RDHIPERRTLNSLM Trigger: CATCAAAGAGTTTAGAGTCCTTCTCTCTGGAATATGGTCTCTCCAGTGGTCCCTTGTCACCGCCTTCCTGCACCAGGGCCCTGCTGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR CCA 90 bp | CTGGATCAGCTCTCTACAAGTTCTCAGGGTCCCCTAGGAGAAATGTaGGACCAGGCAGATTTATGGGTTTGGCCTTGGCTGAGGCTGTCC | + |
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Preference number: 1 (lower is better) Translates to: LDQLSTSSQGPLGEM*DQADLWVWPWLRLS Trigger: GGACAGCCTCAGCCAAGGCCAAACCCATAAATCTGCCTGGTCCCACATTTCTCCTAGGGGACCCTGAGAACTTGTAGAGAGCTGATCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR CCA 90 bp | AAGCCAGTCCCCAGCCTGCCCAGACACAGATCGTATGCTACCGACTaGGAAGAAATCATGCCCGCTCCTTTTTACCACCCTCCAACTCAA | + |
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Preference number: 1 (lower is better) Translates to: KPVPSLPRHRSYATD*EEIMPAPFYHPPTQ Trigger: TTGAGTTGGAGGGTGGTAAAAAGGAGCGGGCATGATTTCTTCCCAGTCGGTAGCATACGATCTGTGTCTGGGCAGGCTGGGGACTGGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR CCA 90 bp | AGCCAGCCCCTTTGCCTCCTCAGGCCAGGTGACTGTCCTAGTCAGTaGGGAAAAACAGATTCTCTGGGAACAGACTTCCAAATTTGTCCT | + |
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Preference number: 1 (lower is better) Translates to: SQPLCLLRPGDCPSQ*GKTDSLGTDFQICP Trigger: AGGACAAATTTGGAAGTCTGTTCCCAGAGAATCTGTTTTTCCCCACTGACTAGGACAGTCACCTGGCCTGAGGAGGCAAAGGGGCTGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR TCA 90 bp | GTTATGTGGTCAGCCCTGAAGGGTTTGTGGAAGGAGGCAAAAGCCTaGGTCTGGACAGTGTGGACACTTCAAGCTCCAGATCAAACTCTC | + |
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Preference number: 1 (lower is better) Translates to: VMWSALKGLWKEAKA*VWTVWTLQAPDQTL Trigger: GAGAGTTTGATCTGGAGCTTGAAGTGTCCACACTGTCCAGACTCAGGCTTTTGCCTCCTTCCACAAACCCTTCAGGGCTGACCACATAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR GCA 90 bp | CACCCCTCTGACTCACCAGGGCACACATACACCACTGGCTGTCTGTaGTCCTTAACTTTTGCATACTCTTCCCTATACATCCTTGTGCCT | + |
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Preference number: 1 (lower is better) Translates to: HPSDSPGHTYTTGCL*SLTFAYSSLYILVP Trigger: AGGCACAAGGATGTATAGGGAAGAGTATGCAAAAGTTAAGGAGCACAGACAGCCAGTGGTGTATGTGTGCCCTGGTGAGTCAGAGGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR CCA 90 bp | CAAAACAAAGCAAAACACCCTTCCTGGTGGGACTTGTTCTTTACCTaGCCCTCTGCCAACTTCATCCTCCTTTCCCTCCTCAGATTCTCC | + |
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Preference number: 1 (lower is better) Translates to: QNKAKHPSWWDLFFT*PSANFILLSLLRFS Trigger: GGAGAATCTGAGGAGGGAAAGGAGGATGAAGTTGGCAGAGGGCCAGGTAAAGAACAAGTCCCACCAGGAAGGGTGTTTTGCTTTGTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR CCA 90 bp | ACTCTTCCCTATACATCCTTGTGCCTAGGGAACAATAGCTATTGTTaGAGACAGATTTCAGCTTCTTCTACTGCCTCCCCACCACAGGCG | + |
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Preference number: 1 (lower is better) Translates to: TLPYTSLCLGNNSYC*RQISASSTASPPQA Trigger: CGCCTGTGGTGGGGAGGCAGTAGAAGAAGCTGAAATCTGTCTCCAACAATAGCTATTGTTCCCTAGGCACAAGGATGTATAGGGAAGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR CCA 90 bp | AGACACTGCTTATCACACCGGGAGAGTGATGCACCTGCTTTATCTTaGGCCATCAAGGAGATAAAGCTGGAAGGATTGCTGTCCTTTACA | + |
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Preference number: 1 (lower is better) Translates to: RHCLSHRESDAPALS*AIKEIKLEGLLSFT Trigger: TGTAAAGGACAGCAATCCTTCCAGCTTTATCTCCTTGATGGCCCAAGATAAAGCAGGTGCATCACTCTCCCGGTGTGATAAGCAGTGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR GCA 90 bp | TGCTATGTTCAGACCCCAGGGACCAACCTGAAACTATACCTGACTTaGAAAGCCCACCTTAGTGTATGGTTGGTCTCCAGTTATTTCTTC | + |
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Preference number: 1 (lower is better) Translates to: CYVQTPGTNLKLYLT*KAHLSVWLVSSYFF Trigger: GAAGAAATAACTGGAGACCAACCATACACTAAGGTGGGCTTTGCAAGTCAGGTATAGTTTCAGGTTGGTCCCTGGGGTCTGAACATAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR CCA 90 bp | TCAGGCCAGGTGACTGTCCTAGTCAGTGGGGAAAAACAGATTCTCTaGGAACAGACTTCCAAATTTGTCCTAATTGGGCAGAGTGGTATA | + |
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Preference number: 1 (lower is better) Translates to: SGQVTVLVSGEKQIL*EQTSKFVLIGQSGI Trigger: TATACCACTCTGCCCAATTAGGACAAATTTGGAAGTCTGTTCCCAGAGAATCTGTTTTTCCCCACTGACTAGGACAGTCACCTGGCCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR CCA 90 bp | TGGGGCAAGCCTGGGATGTCAATGCCTATGGAAAGAAGTTGGCCTTaGGAGCTGATATATAGAAATGCACAGATTGTACCAAAACCAATA | + |
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Preference number: 1 (lower is better) Translates to: WGKPGMSMPMERSWP*ELIYRNAQIVPKPI Trigger: TATTGGTTTTGGTACAATCTGTGCATTTCTATATATCAGCTCCCAAGGCCAACTTCTTTCCATAGGCATTGACATCCCAGGCTTGCCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR CCA 90 bp | TATCCCAATAAAACTTTATTCATACAAACAAGTAAAGGTTGGATTTaGTCTACTGGCCCTGACTTGCCCTCCCTTGATCTAGAATTGAAT | + |
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Preference number: 1 (lower is better) Translates to: YPNKTLFIQTSKGWI*STGPDLPSLDLELN Trigger: ATTCAATTCTAGATCAAGGGAGGGCAAGTCAGGGCCAGTAGACCAAATCCAACCTTTACTTGTTTGTATGAATAAAGTTTTATTGGGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR-3UTR GCA 90 bp | GCCAGCCCCTTTGCCTCCTCAGGCCAGGTGACTGTCCTAGTCAGTGGGGAAAAACCTGGTCGCTGCCCCTaGTTGGCCCTGTCCAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: ASPFASSGQVTVLVSGEKPGRCP*LALSSC Trigger: GCAGCTGGACAGGGCCAAGCAGGGGCAGCGACCAGG...TTTTTCCCCACTGACTAGGACAGTCACCTGGCCTGAGGAGGCAAAGGGGCTGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR CAA 90 bp | TTCCTGGTTCAGCTTGGCTTAGAGACCCCAGTCTCCAGCATGGTGTaGCCCATGGAAGCCTTGTGCTGGTCAGGGAGGGTGAGGCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: FLVQLGLETPVSSMV*PMEALCWSGRVRPQ Trigger: CTGGGGCCTCACCCTCCCTGACCAGCACAAGGCTTCCATGGGCAACACCATGCTGGAGACTGGGGTCTCTAAGCCAAGCTGAACCAGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR-3UTR TCA 90 bp | CATAGAACTCCAGTCAGCAGGTGCTCTTCTTCCTCTGCTGTGGAAACAAAGGGAGCTGGTCAGGGAGGGTaGGGCCCCAGTCATGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: HRTPVSRCSSSSAVETKGAGQGG*GPSHAP Trigger: AGGGGCATGACTGGGGCCTCACCCTCCCTGACCAGC...TCCCTTTGTTTCCACAGCAGAGGAAGAAGAGCACCTGCTGACTGGAGTTCTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR-3UTR TCA 90 bp | GATTTCAGCTTCTTCTACTGCCTCCCCACCACAGGCGAGCATAGAACTCCAGTCGAGTGGCTGCCTCTTTaGGCAAAGGCAGAGCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: DFSFFYCLPTTGEHRTPVEWLPL*AKAELP Trigger: AGGCAGCTCTGCCTTTGCTCAAAGAGGCAGCCACTC...GACTGGAGTTCTATGCTCGCCTGTGGTGGGGAGGCAGTAGAAGAAGCTGAAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR-3UTR TCA 90 bp | CTCCAGTCAGCAGGTGCTCTTCTTCCTCTGCTGTGGAAACAAAGGGATCCATTCCCTCCACTCAACTCATaGGCAGCCTGCTGGGACTCG | + |
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Preference number: 2 (lower is better) Translates to: LQSAGALLPLLWKQRDPFPPLNS*AACWDS Trigger: CGAGTCCCAGCAGGCTGCTCATGAGTTGAGTGGAGG...GAATGGATCCCTTTGTTTCCACAGCAGAGGAAGAAGAGCACCTGCTGACTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR-3UTR CCA 90 bp | GCCAGCCCCTTTGCCTCCTCAGGCCAGGTGACTGTCCTAGTCAGTGGGGAAAAACCCCTAGGAGAAATGTaGGACCAGGCAGATTTATGG | + |
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Preference number: 2 (lower is better) Translates to: ASPFASSGQVTVLVSGEKPLGEM*DQADLW Trigger: CCATAAATCTGCCTGGTCCCACATTTCTCCTAGGGG...TTTTTCCCCACTGACTAGGACAGTCACCTGGCCTGAGGAGGCAAAGGGGCTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR-3UTR TCA 90 bp | GCTGCTGGATCAGCTCTCTACAAGTTCTCAGGGTCCCCTAGGAGAAATGTGGGATCATCTGCTGAAATGTaGAAGGCAGCAGGGCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: AAGSALYKFSGSPRRNVGSSAEM*KAAGPW Trigger: CCAGGGCCCTGCTGCCTTTCACATTTCAGCAGATGA...TCCCACATTTCTCCTAGGGGACCCTGAGAACTTGTAGAGAGCTGATCCAGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR-3UTR TCA 90 bp | CATAGAACTCCAGTCAGCAGGTGCTCTTCTTCCTCTGCTGTGGAAACAAAGGGATCCACCCCAGCTTGCTaGGTCACCCCATCAATCCCC | + |
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Preference number: 2 (lower is better) Translates to: HRTPVSRCSSSSAVETKGSTPAC*VTPSIP Trigger: GGGGATTGATGGGGTGACTCAGCAAGCTGGGGTGGA...TCCCTTTGTTTCCACAGCAGAGGAAGAAGAGCACCTGCTGACTGGAGTTCTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR-3UTR CCA 90 bp | GCCAGCCCCTTTGCCTCCTCAGGCCAGGTGACTGTCCTAGTCAGTGGGGAAAAAAAACACCCTTCCTGGTaGGACTTGTTCTTTACCTGG | + |
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Preference number: 2 (lower is better) Translates to: ASPFASSGQVTVLVSGEKKHPSW*DLFFTW Trigger: CCAGGTAAAGAACAAGTCCCACCAGGAAGGGTGTTT...TTTTTCCCCACTGACTAGGACAGTCACCTGGCCTGAGGAGGCAAAGGGGCTGGC 54% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR CAA 90 bp | CTGCCAACTTCATCCTCCTTTCCCTCCTCAGATTCTCCACCGGGGTaGTGTTATGTGGTCAGCCCTGAAGGGTTTGTGGAAGGAGGCAAA | + |
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Preference number: 2 (lower is better) Translates to: LPTSSSFPSSDSPPG*CYVVSPEGFVEGGK Trigger: TTTGCCTCCTTCCACAAACCCTTCAGGGCTGACCACATAACACAACCCCGGTGGAGAATCTGAGGAGGGAAAGGAGGATGAAGTTGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR-3UTR TCA 90 bp | GATTTCAGCTTCTTCTACTGCCTCCCCACCACAGGCGAGCATAGAACTCCAGTCAAGGAGGCAAAAGCCTaGGTCTGGACAGTGTGGACA | + |
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Preference number: 2 (lower is better) Translates to: DFSFFYCLPTTGEHRTPVKEAKA*VWTVWT Trigger: TGTCCACACTGTCCAGACTCAGGCTTTTGCCTCCTT...GACTGGAGTTCTATGCTCGCCTGTGGTGGGGAGGCAGTAGAAGAAGCTGAAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR-3UTR GCA 90 bp | AAATCATGCCCGCTCCTTTTTACCACCCTCCAACTCAACCAGGGAGATGCTGCCACTGCTTCTTCTGCCTaGTGGAAGCCAAGCCTGAAC | + |
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Preference number: 2 (lower is better) Translates to: KSCPLLFTTLQLNQGDAATASSA*WKPSLN Trigger: GTTCAGGCTTGGCTTCCAGCAGGCAGAAGAAGCAGT...GGCAGCATCTCCCTGGTTGAGTTGGAGGGTGGTAAAAAGGAGCGGGCATGATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR CAA 90 bp | GCACCTGCTTTATCTTGGGCCATCAAGGAGATAAAGCTGGAAGGATaGCTGTCCTTTACAGGCAGGGCTGTGAGTGGCTGCCTCTTTGAG | + |
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Preference number: 2 (lower is better) Translates to: APALSWAIKEIKLEG*LSFTGRAVSGCLFE Trigger: CTCAAAGAGGCAGCCACTCACAGCCCTGCCTGTAAAGGACAGCAATCCTTCCAGCTTTATCTCCTTGATGGCCCAAGATAAAGCAGGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR-3UTR GCA 90 bp | GCTGTGAGTGGCTGCCTCTTTGAGCAAAGGCAGAGCTGCCTGTGGGATAAAATGCATTACTGCTTCTTCTaGCTGCTGGAAGCCAAGCCT | + |
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Preference number: 2 (lower is better) Translates to: AVSGCLFEQRQSCLWDKMHYCFF*LLEAKP Trigger: AGGCTTGGCTTCCAGCAGGCAGAAGAAGCAGTAATG...CATTTTATCCCACAGGCAGCTCTGCCTTTGCTCAAAGAGGCAGCCACTCACAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR-3UTR GCA 90 bp | TGCTCCTTAACTTTTGCATACTCTTCCCTATACATCCTTGTGCCTAGGGAACAAGCAGCAGGGCCCTGGTaGAGGAAGGCGGTGACAAGG | + |
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Preference number: 2 (lower is better) Translates to: CSLTFAYSSLYILVPREQAAGPW*RKAVTR Trigger: CCTTGTCACCGCCTTCCTGCACCAGGGCCCTGCTGC...TTGTTCCCTAGGCACAAGGATGTATAGGGAAGAGTATGCAAAAGTTAAGGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR-3UTR CCA 90 bp | GGACGGCTCTTTTTCTCATGTAATGTCATGTCAGGGGTGCGGCAGCGACATGGAGTGACAAGGGACCACTaGAGAGACCATATTCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: GRLFFSCNVMSGVRQRHGVTRDH*RDHIPE Trigger: CTCTGGAATATGGTCTCTCCAGTGGTCCCTTGTCAC...TCCATGTCGCTGCCGCACCCCTGACATGACATTACATGAGAAAAAGAGCCGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR-3UTR CCA 90 bp | GCCAGCCCCTTTGCCTCCTCAGGCCAGGTGACTGTCCTAGTCAGTGGGGAAAAACCTATGGAAAGAAGTTaGCCTTGGGAGCTGATATAT | + |
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Preference number: 2 (lower is better) Translates to: ASPFASSGQVTVLVSGEKPMERS*PWELIY Trigger: ATATATCAGCTCCCAAGGCCAACTTCTTTCCATAGG...TTTTTCCCCACTGACTAGGACAGTCACCTGGCCTGAGGAGGCAAAGGGGCTGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR-3UTR TCA 90 bp | CATAGAACTCCAGTCAGCAGGTGCTCTTCTTCCTCTGCTGTGGAAACAAAGGGACGAGCCAAAGGTGAATaGACTCCATCCTGGGTTTCC | + |
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Preference number: 2 (lower is better) Translates to: HRTPVSRCSSSSAVETKGRAKGE*TPSWVS Trigger: GGAAACCCAGGATGGAGTTCATTCACCTTTGGCTCG...TCCCTTTGTTTCCACAGCAGAGGAAGAAGAGCACCTGCTGACTGGAGTTCTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR-3UTR CCA 90 bp | GGACGGCTCTTTTTCTCATGTAATGTCATGTCAGGGGTGCGGCAGCGACATGGACCATCCTGGGTTTCCTaGGGACTCTCTATTACTGAT | + |
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Preference number: 2 (lower is better) Translates to: GRLFFSCNVMSGVRQRHGPSWVS*GLSITD Trigger: ATCAGTAATAGAGAGTCCCCAGGAAACCCAGGATGG...TCCATGTCGCTGCCGCACCCCTGACATGACATTACATGAGAAAAAGAGCCGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR-3UTR CCA 90 bp | TCTTCTTCCTCTGCTGTGGAAACAAAGGGATCCATTCCTGGTTCAGCTTGGCTTTTATGGGTTTGGCCTTaGCTGAGGCTGTCCGCCATG | + |
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Preference number: 2 (lower is better) Translates to: SSSSAVETKGSIPGSAWLLWVWP*LRLSAM Trigger: CATGGCGGACAGCCTCAGCCAAGGCCAAACCCATAA...AAGCCAAGCTGAACCAGGAATGGATCCCTTTGTTTCCACAGCAGAGGAAGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR CAA 90 bp | GATGTCATTACTGCTTCTTCTGCCTGCTGGAAGCCAAGCCTGAACTaGAAACTTGAGCCTGAGACAAATCCAAAGGCTGGGAGTCAAGGG | + |
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Preference number: 2 (lower is better) Translates to: DVITASSACWKPSLN*KLEPETNPKAGSQG Trigger: CCCTTGACTCCCAGCCTTTGGATTTGTCTCAGGCTCAAGTTTCAAGTTCAGGCTTGGCTTCCAGCAGGCAGAAGAAGCAGTAATGACATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR-3UTR TCA 90 bp | AAATCATGCCCGCTCCTTTTTACCACCCTCCAACTCAACCAGGGAGATGCTGCCGTTGGCCTTGGGAGCTaGTATATAGAAATGCACAGA | + |
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Preference number: 2 (lower is better) Translates to: KSCPLLFTTLQLNQGDAAVGLGS*YIEMHR Trigger: TCTGTGCATTTCTATATATCAGCTCCCAAGGCCAAC...GGCAGCATCTCCCTGGTTGAGTTGGAGGGTGGTAAAAAGGAGCGGGCATGATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR-3UTR TCA 90 bp | CTCCAGTCAGCAGGTGCTCTTCTTCCTCTGCTGTGGAAACAAAGGGATCCATTCTCAGTGACTAAAATTTaGGAGGCAGGCAGTTCCTGC | + |
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Preference number: 2 (lower is better) Translates to: LQSAGALLPLLWKQRDPFSVTKI*EAGSSC Trigger: GCAGGAACTGCCTGCCTCTCAAATTTTAGTCACTGA...GAATGGATCCCTTTGTTTCCACAGCAGAGGAAGAAGAGCACCTGCTGACTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR-3UTR CCA 90 bp | CTCCAGTCAGCAGGTGCTCTTCTTCCTCTGCTGTGGAAACAAAGGGATCCATTCGGATGTCAATGCCTATaGAAAGAAGTTGGCCTTGGG | + |
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Preference number: 2 (lower is better) Translates to: LQSAGALLPLLWKQRDPFGCQCL*KEVGLG Trigger: CCCAAGGCCAACTTCTTTCCATAGGCATTGACATCC...GAATGGATCCCTTTGTTTCCACAGCAGAGGAAGAAGAGCACCTGCTGACTGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR-3UTR TCA 90 bp | GGGAAATTTCAAAAAGAAATCACTCCATTCTTTAGCTTCCTGTCTGGCTTTGTGACCCTGCTATGCCCATaGGCACCAGGGGCTACTGCT | + |
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Preference number: 2 (lower is better) Translates to: GKFQKEITPFFSFLSGFVTLLCP*APGATA Trigger: AGCAGTAGCCCCTGGTGCTCATGGGCATAGCAGGGT...CACAAAGCCAGACAGGAAGCTAAAGAATGGAGTGATTTCTTTTTGAAATTTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR-3UTR GCA 90 bp | GGACGGCTCTTTTTCTCATGTAATGTCATGTCAGGGGTGCGGCAGCGACATGGAAAACTATACCTGACTTaGAAAGCCCACCTTAGTGTA | + |
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Preference number: 2 (lower is better) Translates to: GRLFFSCNVMSGVRQRHGKLYLT*KAHLSV Trigger: TACACTAAGGTGGGCTTTGCAAGTCAGGTATAGTTT...TCCATGTCGCTGCCGCACCCCTGACATGACATTACATGAGAAAAAGAGCCGTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR-3UTR CCA 90 bp | ACACCTTGTACCAGGAATTGGGGCAAGCCTGGGATGTCAATGCCTATGGAAAGAAACCCCACGCTGTATTaGCAGAGCAATTTCTGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: TPCTRNWGKPGMSMPMERNPTLY*QSNFCL Trigger: AAGACAGAAATTGCTCTGCCAATACAGCGTGGGGTT...TCTTTCCATAGGCATTGACATCCCAGGCTTGCCCCAATTCCTGGTACAAGGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| 3UTR-3UTR CCA 90 bp | GATTTCAGCTTCTTCTACTGCCTCCCCACCACAGGCGAGCATAGAACTCCAGTCATAGAACACCCAGACTaGGCTTTTATGGTCTTGTTA | + |
|
Preference number: 2 (lower is better) Translates to: DFSFFYCLPTTGEHRTPVIEHPD*AFMVLL Trigger: TAACAAGACCATAAAAGCCCAGTCTGGGTGTTCTAT...GACTGGAGTTCTATGCTCGCCTGTGGTGGGGAGGCAGTAGAAGAAGCTGAAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| 3UTR-3UTR GCA 90 bp | CATAGAACTCCAGTCAGCAGGTGCTCTTCTTCCTCTGCTGTGGAAACAAAGGGACAATTTCTGTCTTCCTaGCTTCTTGTCTTGAAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: HRTPVSRCSSSSAVETKGQFLSS*LLVLKS Trigger: GCTCTTCAAGACAAGAAGGCAGGAAGACAGAAATTG...TCCCTTTGTTTCCACAGCAGAGGAAGAAGAGCACCTGCTGACTGGAGTTCTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| 3UTR-3UTR CCA 90 bp | TGCTCCTTAACTTTTGCATACTCTTCCCTATACATCCTTGTGCCTAGGGAACAACCTTGTACCAGGAATTaGGGCAAGCCTGGGATGTCA | + |
|
Preference number: 2 (lower is better) Translates to: CSLTFAYSSLYILVPREQPCTRN*GKPGMS Trigger: TGACATCCCAGGCTTGCCCCAATTCCTGGTACAAGG...TTGTTCCCTAGGCACAAGGATGTATAGGGAAGAGTATGCAAAAGTTAAGGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| 3UTR-3UTR TCA 90 bp | TCTTCTTCCTCTGCTGTGGAAACAAAGGGATCCATTCCTGGTTCAGCTTGGCTTGGGACTCTCTATTACTaGTGTCATTACTGCTTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: SSSSAVETKGSIPGSAWLGTLYY*CHYCFF Trigger: GAAGAAGCAGTAATGACATCAGTAATAGAGAGTCCC...AAGCCAAGCTGAACCAGGAATGGATCCCTTTGTTTCCACAGCAGAGGAAGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| 3UTR-3UTR TCA 90 bp | CATAGAACTCCAGTCAGCAGGTGCTCTTCTTCCTCTGCTGTGGAAACAAAGGGAGCTCTAGAAAACTTTTaGCACCTTGTACCAGGAATT | + |
|
Preference number: 2 (lower is better) Translates to: HRTPVSRCSSSSAVETKGALENF*HLVPGI Trigger: AATTCCTGGTACAAGGTGTCAAAAGTTTTCTAGAGC...TCCCTTTGTTTCCACAGCAGAGGAAGAAGAGCACCTGCTGACTGGAGTTCTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| 3UTR-3UTR TCA 90 bp | TGCTCCTTAACTTTTGCATACTCTTCCCTATACATCCTTGTGCCTAGGGAACAAAGATGCTTTAAGCTATaGGCAGACTCCCAGCAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: CSLTFAYSSLYILVPREQRCFKL*ADSQQV Trigger: TACCTGCTGGGAGTCTGCTCATAGCTTAAAGCATCT...TTGTTCCCTAGGCACAAGGATGTATAGGGAAGAGTATGCAAAAGTTAAGGAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| 3UTR CAA 90 bp | TTCATACAAACAAGTAAAGGTTGGATTTGGTCTACTGGCCCTGACTaGCCCTCCCTTGATCTAGAATTGAATAAGCTTCCAGGGCTAGTA | + |
|
Preference number: 2 (lower is better) Translates to: FIQTSKGWIWSTGPD*PSLDLELNKLPGLV Trigger: TACTAGCCCTGGAAGCTTATTCAATTCTAGATCAAGGGAGGGCAAGTCAGGGCCAGTAGACCAAATCCAACCTTTACTTGTTTGTATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| 3UTR-3UTR CCA 90 bp | AACATCTCGTCGGGAAATTTCAAAAAGAAATCACTCCATTCTTTAGCTTCCTGTGCTTCTTCTGCCTGCTaGAAGCCAAGCCTGAACTTG | + |
|
Preference number: 2 (lower is better) Translates to: NISSGNFKKKSLHSLASCASSAC*KPSLNL Trigger: CAAGTTCAGGCTTGGCTTCCAGCAGGCAGAAGAAGC...ACAGGAAGCTAAAGAATGGAGTGATTTCTTTTTGAAATTTCCCGACGAGATGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| 3UTR-3UTR CCA 90 bp | AACATCTCGTCGGGAAATTTCAAAAAGAAATCACTCCATTCTTTAGCTTCCTGTGACAAATCCAAAGGCTaGGAGTCAAGGGGAAGACAA | + |
|
Preference number: 2 (lower is better) Translates to: NISSGNFKKKSLHSLASCDKSKG*ESRGRQ Trigger: TTGTCTTCCCCTTGACTCCCAGCCTTTGGATTTGTC...ACAGGAAGCTAAAGAATGGAGTGATTTCTTTTTGAAATTTCCCGACGAGATGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| 3UTR CCA 72 bp | GTCTCCAGCATGGTGTTGCCCATGGAAGCCTTGTGCTaGTCAGGGAGGGTGAGGCCCCAGTCATGCCCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: VSSMVLPMEALC*SGRVRPQSCPW Trigger: CCAGGGGCATGACTGGGGCCTCACCCTCCCTGACCAGCACAAGGCTTCCATGGGCAACACCATGCTGGAGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| 3UTR GCA 72 bp | ACACCTGGTCGCTGCCCCTGCTTGGCCCTGTCCAGCTaGTGGATCAGCTCTCTACAAGTTCTCAGGGTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: TPGRCPCLALSS*WISSLQVLRVP Trigger: GGGGACCCTGAGAACTTGTAGAGAGCTGATCCAGCAGCTGGACAGGGCCAAGCAGGGGCAGCGACCAGGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| 3UTR TCA 72 bp | GCCATAGTCCAGCTGCTCTCCCACAGCCCATGCAGCTaGGGCTGGGACGTTCTGTCTTCTACCTCCACCCCA | + |
|
Preference number: 3 (lower is better) Translates to: AIVQLLSHSPCS*GWDVLSSTSTP Trigger: TGGGGTGGAGGTAGAAGACAGAACGTCCCAGCCTCAGCTGCATGGGCTGTGGGAGAGCAGCTGGACTATGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| 3UTR TCA 72 bp | TGTGGGACCAGGCAGATTTATGGGTTTGGCCTTGGCTaGGGCTGTCCGCCATGGCTCCCAGCCATAGTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: CGTRQIYGFGLG*GCPPWLPAIVQ Trigger: CTGGACTATGGCTGGGAGCCATGGCGGACAGCCTCAGCCAAGGCCAAACCCATAAATCTGCCTGGTCCCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| 3UTR-3UTR CAA 90 bp | GCCAGCCCCTTTGCCTCCTCAGGCCAGGTGACTGTCCTAGTCAGTGGGGAAAAAGGCAGATTTATGGGTTaGGCCTTGGCTGAGGCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: ASPFASSGQVTVLVSGEKGRFMG*ALAEAV Trigger: GACAGCCTCAGCCAAGGCCAAACCCATAAATCTGCC...TTTTTCCCCACTGACTAGGACAGTCACCTGGCCTGAGGAGGCAAAGGGGCTGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| 3UTR GCA 72 bp | AGGCACCCTGCTATGCCCATGAGCACCAGGGGCTACTaGTGTCCTAACCCCACGCTGTATTGGCAGAGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: RHPAMPMSTRGY*CPNPTLYWQSN Trigger: ATTGCTCTGCCAATACAGCGTGGGGTTAGGACAGCAGTAGCCCCTGGTGCTCATGGGCATAGCAGGGTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| 3UTR CCA 72 bp | GGGCCCTGGTGCAGGAAGGCGGTGACAAGGGACCACTaGAGAGACCATATTCCAGAGAGAAGGACTCTAAAC | + |
|
Preference number: 3 (lower is better) Translates to: GPWCRKAVTRDH*RDHIPERRTLN Trigger: GTTTAGAGTCCTTCTCTCTGGAATATGGTCTCTCCAGTGGTCCCTTGTCACCGCCTTCCTGCACCAGGGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| 3UTR CCA 72 bp | GAAATGTGGGACCAGGCAGATTTATGGGTTTGGCCTTaGCTGAGGCTGTCCGCCATGGCTCCCAGCCATAGT | + |
|
Preference number: 3 (lower is better) Translates to: EMWDQADLWVWP*LRLSAMAPSHS Trigger: ACTATGGCTGGGAGCCATGGCGGACAGCCTCAGCCAAGGCCAAACCCATAAATCTGCCTGGTCCCACATTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| 3UTR GCA 72 bp | TCATACTTACTGCTTCCAAAAGCCCTTCAGGCACCCTaGTATGCCCATGAGCACCAGGGGCTACTGCTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: SYLLLPKALQAP*YAHEHQGLLLS Trigger: GGACAGCAGTAGCCCCTGGTGCTCATGGGCATAGCAGGGTGCCTGAAGGGCTTTTGGAAGCAGTAAGTATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| 3UTR GCA 72 bp | AAAGCCAGTCCCCAGCCTGCCCAGACACAGATCGTATaGTACCGACTGGGAAGAAATCATGCCCGCTCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: KASPQPAQTQIV*YRLGRNHARSF Trigger: AAAGGAGCGGGCATGATTTCTTCCCAGTCGGTAGCATACGATCTGTGTCTGGGCAGGCTGGGGACTGGCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| 3UTR GCA 72 bp | CCCACCACAGGCGAGCATAGAACTCCAGTCAGCAGGTaGTCTTCTTCCTCTGCTGTGGAAACAAAGGGATCC | + |
|
Preference number: 3 (lower is better) Translates to: PTTGEHRTPVSR*SSSSAVETKGS Trigger: GGATCCCTTTGTTTCCACAGCAGAGGAAGAAGAGCACCTGCTGACTGGAGTTCTATGCTCGCCTGTGGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| 3UTR TCA 72 bp | CCTTCTTGTCTTGAAGAGCCCTGGGGGAGGGGGATGTaGTTCCCTAACTTGACTGAACCATGTCAACCTCGG | + |
|
Preference number: 3 (lower is better) Translates to: PSCLEEPWGRGM*FPNLTEPCQPR Trigger: CCGAGGTTGACATGGTTCAGTCAAGTTAGGGAATCACATCCCCCTCCCCCAGGGCTCTTCAAGACAAGAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| 3UTR TCA 72 bp | GATTGTCAGCCATGTAAGTCTGGGGGCTTCATCTGCTaGAATGTGAAAGGCAGCAGGGCCCTGGTGCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: DCQPCKSGGFIC*NVKGSRALVQE Trigger: TTCCTGCACCAGGGCCCTGCTGCCTTTCACATTTCAGCAGATGAAGCCCCCAGACTTACATGGCTGACAATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| 3UTR CCA 72 bp | GCAAAACACCCTTCCTGGTGGGACTTGTTCTTTACCTaGCCCTCTGCCAACTTCATCCTCCTTTCCCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: AKHPSWWDLFFT*PSANFILLSLL Trigger: GAGGAGGGAAAGGAGGATGAAGTTGGCAGAGGGCCAGGTAAAGAACAAGTCCCACCAGGAAGGGTGTTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| 3UTR TCA 72 bp | TCAGCCCTGAAGGGTTTGTGGAAGGAGGCAAAAGCCTaGGTCTGGACAGTGTGGACACTTCAAGCTCCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: SALKGLWKEAKA*VWTVWTLQAPD Trigger: ATCTGGAGCTTGAAGTGTCCACACTGTCCAGACTCAGGCTTTTGCCTCCTTCCACAAACCCTTCAGGGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| 3UTR TCA 72 bp | AGATTCTCCACCGGGGTTGTGTTATGTGGTCAGCCCTaGAGGGTTTGTGGAAGGAGGCAAAAGCCTGAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: RFSTGVVLCGQP*RVCGRRQKPES Trigger: AGACTCAGGCTTTTGCCTCCTTCCACAAACCCTTCAGGGCTGACCACATAACACAACCCCGGTGGAGAATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| 3UTR TCA 72 bp | GGAAATCTCCCTCTTCACTCTACCTGCACCTCACCCTaGGAGGGACAGGAAGAAAACTGGACTAGGGTCACA | + |
|
Preference number: 3 (lower is better) Translates to: GNLPLHSTCTSP*EGQEENWTRVT Trigger: TGTGACCCTAGTCCAGTTTTCTTCCTGTCCCTCTCAGGGTGAGGTGCAGGTAGAGTGAAGAGGGAGATTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| 3UTR GCA 72 bp | CAGACCCCAGGGACCAACCTGAAACTATACCTGACTTaGAAAGCCCACCTTAGTGTATGGTTGGTCTCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: QTPGTNLKLYLT*KAHLSVWLVSS Trigger: ACTGGAGACCAACCATACACTAAGGTGGGCTTTGCAAGTCAGGTATAGTTTCAGGTTGGTCCCTGGGGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| 3UTR GCA 72 bp | GACACAGATCGTATGCTACCGACTGGGAAGAAATCATaGCCGCTCCTTTTTACCACCCTCCAACTCAACCAG | + |
|
Preference number: 3 (lower is better) Translates to: DTDRMLPTGKKS*PLLFTTLQLNQ Trigger: CTGGTTGAGTTGGAGGGTGGTAAAAAGGAGCGGGCATGATTTCTTCCCAGTCGGTAGCATACGATCTGTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| 3UTR CCA 72 bp | CTCAGTCCAAAGAAGTTGACAGCCAAGGTTAGCCATTaGAGGAGGGCAACAGGGAAATCTCCCTCTTCACTC | + |
|
Preference number: 3 (lower is better) Translates to: LSPKKLTAKVSH*RRATGKSPSSL Trigger: GAGTGAAGAGGGAGATTTCCCTGTTGCCCTCCTCCAATGGCTAACCTTGGCTGTCAACTTCTTTGGACTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| 3UTR-3UTR CAA 90 bp | CTCCAGTCAGCAGGTGCTCTTCTTCCTCTGCTGTGGAAACAAAGGGATCCATTCAAGCCAAGCCTGAACTaGAAACTTGAGCCTGAGACA | + |
|
Preference number: 3 (lower is better) Translates to: LQSAGALLPLLWKQRDPFKPSLN*KLEPET Trigger: TGTCTCAGGCTCAAGTTTCAAGTTCAGGCTTGGCTT...GAATGGATCCCTTTGTTTCCACAGCAGAGGAAGAAGAGCACCTGCTGACTGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| 3UTR GCA 72 bp | GACTCACCAGGGCACACATACACCACTGGCTGTCTGTaGTCCTTAACTTTTGCATACTCTTCCCTATACATC | + |
|
Preference number: 3 (lower is better) Translates to: DSPGHTYTTGCL*SLTFAYSSLYI Trigger: GATGTATAGGGAAGAGTATGCAAAAGTTAAGGAGCACAGACAGCCAGTGGTGTATGTGTGCCCTGGTGAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| 3UTR CCA 72 bp | ACTTTTGACACCTTGTACCAGGAATTGGGGCAAGCCTaGGATGTCAATGCCTATGGAAAGAAGTTGGCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: TFDTLYQELGQA*DVNAYGKKLAL Trigger: CAAGGCCAACTTCTTTCCATAGGCATTGACATCCCAGGCTTGCCCCAATTCCTGGTACAAGGTGTCAAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| 3UTR-3UTR CAA 90 bp | GGGAAATTTCAAAAAGAAATCACTCCATTCTTTAGCTTCCTGTCTGGCTTTGTGTCCTGCCTTCTTGTCTaGAAGAGCCCTGGGGGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: GKFQKEITPFFSFLSGFVSCLLV*KSPGGG Trigger: CCCTCCCCCAGGGCTCTTCAAGACAAGAAGGCAGGA...CACAAAGCCAGACAGGAAGCTAAAGAATGGAGTGATTTCTTTTTGAAATTTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| 3UTR-3UTR CAA 90 bp | CATAGAACTCCAGTCAGCAGGTGCTCTTCTTCCTCTGCTGTGGAAACAAAGGGATGCACCTGCTTTATCTaGGGCCATCAAGGAGATAAA | + |
|
Preference number: 3 (lower is better) Translates to: HRTPVSRCSSSSAVETKGCTCFI*GHQGDK Trigger: TTTATCTCCTTGATGGCCCAAGATAAAGCAGGTGCA...TCCCTTTGTTTCCACAGCAGAGGAAGAAGAGCACCTGCTGACTGGAGTTCTATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| 3UTR-3UTR CAA 90 bp | TGCTCCTTAACTTTTGCATACTCTTCCCTATACATCCTTGTGCCTAGGGAACAATTTATGGGTTTGGCCTaGGCTGAGGCTGTCCGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: CSLTFAYSSLYILVPREQFMGLA*AEAVRH Trigger: ATGGCGGACAGCCTCAGCCAAGGCCAAACCCATAAA...TTGTTCCCTAGGCACAAGGATGTATAGGGAAGAGTATGCAAAAGTTAAGGAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| 3UTR GCA 72 bp | CTCTCTATTACTGATGTCATTACTGCTTCTTCTGCCTaGTGGAAGCCAAGCCTGAACTTGAAACTTGAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LSITDVITASSA*WKPSLNLKLEP Trigger: AGGCTCAAGTTTCAAGTTCAGGCTTGGCTTCCAGCAGGCAGAAGAAGCAGTAATGACATCAGTAATAGAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| 3UTR CCA 72 bp | TCTATTACTGATGTCATTACTGCTTCTTCTGCCTGCTaGAAGCCAAGCCTGAACTTGAAACTTGAGCCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SITDVITASSAC*KPSLNLKLEPE Trigger: CTCAGGCTCAAGTTTCAAGTTCAGGCTTGGCTTCCAGCAGGCAGAAGAAGCAGTAATGACATCAGTAATAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| 3UTR CCA 72 bp | GGCAAGCCTGGGATGTCAATGCCTATGGAAAGAAGTTaGCCTTGGGAGCTGATATATAGAAATGCACAGATT | + |
|
Preference number: 3 (lower is better) Translates to: GKPGMSMPMERS*PWELIYRNAQI Trigger: AATCTGTGCATTTCTATATATCAGCTCCCAAGGCCAACTTCTTTCCATAGGCATTGACATCCCAGGCTTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| 3UTR CCA 72 bp | AGCTCTAGAAAACTTTTGACACCTTGTACCAGGAATTaGGGCAAGCCTGGGATGTCAATGCCTATGGAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: SSRKLLTPCTRN*GKPGMSMPMER Trigger: TCTTTCCATAGGCATTGACATCCCAGGCTTGCCCCAATTCCTGGTACAAGGTGTCAAAAGTTTTCTAGAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| 3UTR CCA 72 bp | CCTGGGATGTCAATGCCTATGGAAAGAAGTTGGCCTTaGGAGCTGATATATAGAAATGCACAGATTGTACCA | + |
|
Preference number: 3 (lower is better) Translates to: PGMSMPMERSWP*ELIYRNAQIVP Trigger: TGGTACAATCTGTGCATTTCTATATATCAGCTCCCAAGGCCAACTTCTTTCCATAGGCATTGACATCCCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| 3UTR CCA 72 bp | TATACATCCTTGTGCCTAGGGAACAATAGCTATTGTTaGAGACAGATTTCAGCTTCTTCTACTGCCTCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: YTSLCLGNNSYC*RQISASSTASP Trigger: TGGGGAGGCAGTAGAAGAAGCTGAAATCTGTCTCCAACAATAGCTATTGTTCCCTAGGCACAAGGATGTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| 3UTR CCA 72 bp | TTTGATCCAAAATCTCAGAGACAGTCCATAGCTTCTTaGTGTCATGGCTTTGTGCAAAACATCATGGTATCA | + |
|
Preference number: 3 (lower is better) Translates to: FDPKSQRQSIAS*CHGFVQNIMVS Trigger: TGATACCATGATGTTTTGCACAAAGCCATGACACCAAGAAGCTATGGACTGTCTCTGAGATTTTGGATCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| 3UTR CCA 72 bp | AAAACTTTATTCATACAAACAAGTAAAGGTTGGATTTaGTCTACTGGCCCTGACTTGCCCTCCCTTGATCTA | + |
|
Preference number: 3 (lower is better) Translates to: KTLFIQTSKGWI*STGPDLPSLDL Trigger: TAGATCAAGGGAGGGCAAGTCAGGGCCAGTAGACCAAATCCAACCTTTACTTGTTTGTATGAATAAAGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| 3UTR CAA 72 bp | ACCCCAGTCTCCAGCATGGTGTTGCCCATGGAAGCCTaGTGCTGGTCAGGGAGGGTGAGGCCCCAGTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: TPVSSMVLPMEA*CWSGRVRPQSC Trigger: GCATGACTGGGGCCTCACCCTCCCTGACCAGCACAAGGCTTCCATGGGCAACACCATGCTGGAGACTGGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| CDS-3UTR GCA 90 bp | GCCAGCCCCTTTGCCTCCTCAGGCCAGGTGACTGTCCTAGTCAGTGGGGAAAAACCCTTCTCCTGGCATTaGTGGTGCCTCTGTGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ASPFASSGQVTVLVSGEKPFSWH*WCLCGL Trigger: GAGGCCACAGAGGCACCAGCAATGCCAGGAGAAGGG...TTTTTCCCCACTGACTAGGACAGTCACCTGGCCTGAGGAGGCAAAGGGGCTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| CDS-3UTR CCA 90 bp | GGACGGCTCTTTTTCTCATGTAATGTCATGTCAGGGGTGCGGCAGCGACATGGAGGGCCAGGCAACTCATaGCCGAGGGTCCGGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GRLFFSCNVMSGVRQRHGGPGNS*PRVRVR Trigger: CCTCACCCGGACCCTCGGCCATGAGTTGCCTGGCCC...TCCATGTCGCTGCCGCACCCCTGACATGACATTACATGAGAAAAAGAGCCGTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| 3UTR CAA 72 bp | CAGCTTGGCTTAGAGACCCCAGTCTCCAGCATGGTGTaGCCCATGGAAGCCTTGTGCTGGTCAGGGAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QLGLETPVSSMV*PMEALCWSGRV Trigger: CACCCTCCCTGACCAGCACAAGGCTTCCATGGGCAACACCATGCTGGAGACTGGGGTCTCTAAGCCAAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| CDS-3UTR TCA 90 bp | GCTGCTGGATCAGCTCTCTACAAGTTCTCAGGGTCCCCTAGGAGAAATGTGGGAGGCCGAGGGTCCGGGTaGGGTGGGCAATGTAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: AAGSALYKFSGSPRRNVGGRGSG*GGQCSL Trigger: CAAGCTACATTGCCCACCTCACCCGGACCCTCGGCC...TCCCACATTTCTCCTAGGGGACCCTGAGAACTTGTAGAGAGCTGATCCAGCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
||
| CDS-3UTR GCA 90 bp | GGAGTCAAGGGGAAGACAAGTAAAGCAGGCAGAAAATCCAGGTCCTTAAGCAGAGGTGTCGGGTGGCACTaGGGGCAGAGCAGCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GVKGKTSKAGRKSRSLSRGVGWH*GQSSLQ Trigger: CTGCAGGCTGCTCTGCCCGCAGTGCCACCCGACACC...TCTGCTTAAGGACCTGGATTTTCTGCCTGCTTTACTTGTCTTCCCCTTGACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| CDS-3UTR CCA 90 bp | CTCCAGTCAGCAGGTGCTCTTCTTCCTCTGCTGTGGAAACAAAGGGATCCATTCAAGCTTGGTGTCGGGTaGCACTGCGGGCAGAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: LQSAGALLPLLWKQRDPFKLGVG*HCGQSS Trigger: GCTGCTCTGCCCGCAGTGCCACCCGACACCAAGCTT...GAATGGATCCCTTTGTTTCCACAGCAGAGGAAGAAGAGCACCTGCTGACTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| CDS-3UTR GCA 90 bp | GGACGGCTCTTTTTCTCATGTAATGTCATGTCAGGGGTGCGGCAGCGACATGGAGGGCAGAGGTGGCTCTaGTCAGTCTGTGATTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: GRLFFSCNVMSGVRQRHGGQRWL*SVCDCS Trigger: GGAGCAATCACAGACTGAGCAGAGCCACCTCTGCCC...TCCATGTCGCTGCCGCACCCCTGACATGACATTACATGAGAAAAAGAGCCGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| CDS-3UTR TCA 90 bp | AAATCATGCCCGCTCCTTTTTACCACCCTCCAACTCAACCAGGGAGATGCTGCCGCTCTGCTCAGTCTGTaGTTGCTCCAGCTAGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: KSCPLLFTTLQLNQGDAAALLSL*LLQLVS Trigger: GGACACTAGCTGGAGCAATCACAGACTGAGCAGAGC...GGCAGCATCTCCCTGGTTGAGTTGGAGGGTGGTAAAAAGGAGCGGGCATGATTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| CDS-3UTR GCA 90 bp | GCTGCTGGATCAGCTCTCTACAAGTTCTCAGGGTCCCCTAGGAGAAATGTGGGATCCTCTTCCTGTCAGTaGCTAGAAGCCACCGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: AAGSALYKFSGSPRRNVGSSSCQ*LEATVP Trigger: AGGCACGGTGGCTTCTAGGCACTGACAGGAAGAGGA...TCCCACATTTCTCCTAGGGGACCCTGAGAACTTGTAGAGAGCTGATCCAGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| CDS-3UTR CCA 90 bp | TCCTGCTATGTTCAGACCCCAGGGACCAACCTGAAACTATACCTGACTTGCAAACTGCGTTCTCCGGGCTaGCCTCACTCCTGCCATGAG | + |
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Preference number: 4 (lower is better) Translates to: SCYVQTPGTNLKLYLTCKLRSPG*PHSCHE Trigger: CTCATGGCAGGAGTGAGGCCAGCCCGGAGAACGCAG...TTTGCAAGTCAGGTATAGTTTCAGGTTGGTCCCTGGGGTCTGAACATAGCAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| CDS-3UTR TCA 90 bp | CTCCAGTCAGCAGGTGCTCTTCTTCCTCTGCTGTGGAAACAAAGGGATCCATTCCCTGCCTTGTCCTGTTaGTGCGACTCCTCTTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: LQSAGALLPLLWKQRDPFPALSC*CDSSSC Trigger: ACAGGAAGAGGAGTCGCATCAACAGGACAAGGCAGG...GAATGGATCCCTTTGTTTCCACAGCAGAGGAAGAAGAGCACCTGCTGACTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| CDS-3UTR TCA 90 bp | GGGGACTCTCTATTACTGATGTCATTACTGCTTCTTCTGCCTGCTGGAAGCCAAGCCTCACTCCTGCCATaGGCTGTTCCCCTAGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: GDSLLLMSLLLLLPAGSQASLLP*AVPLAL Trigger: CAGAGCTAGGGGAACAGCTCATGGCAGGAGTGAGGC...TTGGCTTCCAGCAGGCAGAAGAAGCAGTAATGACATCAGTAATAGAGAGTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| CDS-3UTR GCA 90 bp | GGACGGCTCTTTTTCTCATGTAATGTCATGTCAGGGGTGCGGCAGCGACATGGAGCATCCCAAGCCTCCTaGATAGAGACGAGATCGCAT | + |
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Preference number: 4 (lower is better) Translates to: GRLFFSCNVMSGVRQRHGASQAS*IETRSH Trigger: ATGCGATCTCGTCTCTATGCAGGAGGCTTGGGATGC...TCCATGTCGCTGCCGCACCCCTGACATGACATTACATGAGAAAAAGAGCCGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| CDS-3UTR CCA 90 bp | CATAGAACTCCAGTCAGCAGGTGCTCTTCTTCCTCTGCTGTGGAAACAAAGGGATTCTCCTGGCATTGCTaGTGCCTCTGTGGCCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: HRTPVSRCSSSSAVETKGFSWHC*CLCGLL Trigger: CAGGAGGCCACAGAGGCACCAGCAATGCCAGGAGAA...TCCCTTTGTTTCCACAGCAGAGGAAGAAGAGCACCTGCTGACTGGAGTTCTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| CDS-3UTR CCA 90 bp | ACACCTTGTACCAGGAATTGGGGCAAGCCTGGGATGTCAATGCCTATGGAAAGACTCGAGGGGCAGAGGTaGCTCTGCTCAGTCTGTGAT | + |
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Preference number: 4 (lower is better) Translates to: TPCTRNWGKPGMSMPMERLEGQR*LCSVCD Trigger: ATCACAGACTGAGCAGAGCCACCTCTGCCCCTCGAG...TCTTTCCATAGGCATTGACATCCCAGGCTTGCCCCAATTCCTGGTACAAGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| CDS-3UTR CCA 90 bp | CATAGAACTCCAGTCAGCAGGTGCTCTTCTTCCTCTGCTGTGGAAACAAAGGGACCAACTTGGAAAGCTTaGTGTCGGGTGGCACTGCGG | + |
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Preference number: 4 (lower is better) Translates to: HRTPVSRCSSSSAVETKGPTWKA*CRVALR Trigger: CCGCAGTGCCACCCGACACCAAGCTTTCCAAGTTGG...TCCCTTTGTTTCCACAGCAGAGGAAGAAGAGCACCTGCTGACTGGAGTTCTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| CDS-3UTR CCA 90 bp | GGACGGCTCTTTTTCTCATGTAATGTCATGTCAGGGGTGCGGCAGCGACATGGAAGAGACGAGATCGCATaGGCCACTTCTTTAGCGGGT | + |
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Preference number: 4 (lower is better) Translates to: GRLFFSCNVMSGVRQRHGRDEIA*ATSLAG Trigger: ACCCGCTAAAGAAGTGGCCCATGCGATCTCGTCTCT...TCCATGTCGCTGCCGCACCCCTGACATGACATTACATGAGAAAAAGAGCCGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR CAA 72 bp | TCATCCTCCTTTCCCTCCTCAGATTCTCCACCGGGGTaGTGTTATGTGGTCAGCCCTGAAGGGTTTGTGGAA | + |
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Preference number: 4 (lower is better) Translates to: SSSFPSSDSPPG*CYVVSPEGFVE Trigger: TTCCACAAACCCTTCAGGGCTGACCACATAACACAACCCCGGTGGAGAATCTGAGGAGGGAAAGGAGGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR CAA 72 bp | TTATCTTGGGCCATCAAGGAGATAAAGCTGGAAGGATaGCTGTCCTTTACAGGCAGGGCTGTGAGTGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LSWAIKEIKLEG*LSFTGRAVSGC Trigger: GCAGCCACTCACAGCCCTGCCTGTAAAGGACAGCAATCCTTCCAGCTTTATCTCCTTGATGGCCCAAGATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| CDS-3UTR CCA 90 bp | GCTGCTGGATCAGCTCTCTACAAGTTCTCAGGGTCCCCTAGGAGAAATGTGGGATTTGTTACCAAAAGCTaGAGAGGTCAGGAGACTTTC | + |
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Preference number: 4 (lower is better) Translates to: AAGSALYKFSGSPRRNVGFVTKS*RGQETF Trigger: GAAAGTCTCCTGACCTCTCCAGCTTTTGGTAACAAA...TCCCACATTTCTCCTAGGGGACCCTGAGAACTTGTAGAGAGCTGATCCAGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR CAA 72 bp | ACCAATAAAGCCCCCATCGCTGATGGTACAGGAATCTaGCCGAAGCCCTGTGAGATGATGTTTCTAACATAC | + |
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Preference number: 4 (lower is better) Translates to: TNKAPIADGTGI*PKPCEMMFLTY Trigger: GTATGTTAGAAACATCATCTCACAGGGCTTCGGCAAGATTCCTGTACCATCAGCGATGGGGGCTTTATTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR CAA 72 bp | ACAAGTAAAGGTTGGATTTGGTCTACTGGCCCTGACTaGCCCTCCCTTGATCTAGAATTGAATAAGCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: TSKGWIWSTGPD*PSLDLELNKLP Trigger: TGGAAGCTTATTCAATTCTAGATCAAGGGAGGGCAAGTCAGGGCCAGTAGACCAAATCCAACCTTTACTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR CAA 72 bp | CCCAGGAGAAAAAGGGATTATTTCTTAGAAACCATCTaGATCTTTTCACTCTCCGTTAGAGTCCACATTGCT | + |
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Preference number: 4 (lower is better) Translates to: PRRKRDYFLETI*IFSLSVRVHIA Trigger: AGCAATGTGGACTCTAACGGAGAGTGAAAAGATCAAGATGGTTTCTAAGAAATAATCCCTTTTTCTCCTGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR CAA 72 bp | AGAGACCATATTCCAGAGAGAAGGACTCTAAACTCTTaGATGTTGAATAAACATCTCGTCGGGAAATTTCAA | + |
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Preference number: 4 (lower is better) Translates to: RDHIPERRTLNS*MLNKHLVGKFQ Trigger: TTGAAATTTCCCGACGAGATGTTTATTCAACATCAAAGAGTTTAGAGTCCTTCTCTCTGGAATATGGTCTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| 3UTR CAA 72 bp | CATATTCCAGAGAGAAGGACTCTAAACTCTTTGATGTaGAATAAACATCTCGTCGGGAAATTTCAAAAAGAA | + |
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Preference number: 4 (lower is better) Translates to: HIPERRTLNSLM*NKHLVGKFQKE Trigger: TTCTTTTTGAAATTTCCCGACGAGATGTTTATTCAACATCAAAGAGTTTAGAGTCCTTCTCTCTGGAATATG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| CDS TCA 90 bp | GTCCGTTCCCGTGCTGCGTTCTCCGGGCTGGCCTCACTCCTGCCATaGGCTGTTCCCCTAGCTCTGGTCCCTCGAGGGGCAGAGGTGGCT | + |
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Preference number: 5 (lower is better) Translates to: VRSRAAFSGLASLLP*AVPLALVPRGAEVA Trigger: AGCCACCTCTGCCCCTCGAGGGACCAGAGCTAGGGGAACAGCTCATGGCAGGAGTGAGGCCAGCCCGGAGAACGCAGCACGGGAACGGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| CDS TCA 90 bp | TCGGGTGGCACTGCGGGCAGAGCAGCCTGCAGGGCCAGAAAGGCCTaGCGAAGCGTCTTCACCCGAGTCCGTTCCCGTGCTGCGTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: SGGTAGRAACRARKA*RSVFTRVRSRAAFS Trigger: GGAGAACGCAGCACGGGAACGGACTCGGGTGAAGACGCTTCGTCAGGCCTTTCTGGCCCTGCAGGCTGCTCTGCCCGCAGTGCCACCCGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| CDS-3UTR CAA 90 bp | CTGGATGCCTTAGGGGGTCATCCCTATGGAGGAGCAGGCCCAGTCCCTCCCAGCGCCCTTCTCCTGGCATaGCTGGTGCCTCTGTGGCCT | + |
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Preference number: 5 (lower is better) Translates to: LDALGGHPYGGAGPVPPSALLLA*LVPLWP Trigger: AGGCCACAGAGGCACCAGCAATGCCAGGAGAAGGGC...GCTGGGAGGGACTGGGCCTGCTCCTCCATAGGGATGACCCCCTAAGGCATCCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| CDS TCA 90 bp | CTCTTCCTGTCAGTGCCTAGAAGCCACCGTGCCTTGGCCTTATTATaGCCATGCCCTTCTCCTGGCATTGCTGGTGCCTCTGTGGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: LFLSVPRSHRALALL*PCPSPGIAGASVAS Trigger: GGAGGCCACAGAGGCACCAGCAATGCCAGGAGAAGGGCATGGTCATAATAAGGCCAAGGCACGGTGGCTTCTAGGCACTGACAGGAAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| CDS GCA 90 bp | GGTCAGGAGACTTTCTGCGGCTACAGAGTCTTGAGACCCCAGCTCTaGATCCTTGCATCTTTGGCCGGTCGTGATAGCTGTGGTGGAATC | + |
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Preference number: 5 (lower is better) Translates to: GQETFCGYRVLRPQL*ILASLAGRDSCGGI Trigger: GATTCCACCACAGCTATCACGACCGGCCAAAGATGCAAGGATGCAGAGCTGGGGTCTCAAGACTCTGTAGCCGCAGAAAGTCTCCTGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| CDS TCA 90 bp | CCAAAAGCTGGAGAGGTCAGGAGACTTTCTGCGGCTACAGAGTCTTaGGACCCCAGCTCTGCATCCTTGCATCTTTGGCCGGTCGTGATA | + |
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Preference number: 5 (lower is better) Translates to: PKAGEVRRLSAATES*DPSSASLHLWPVVI Trigger: TATCACGACCGGCCAAAGATGCAAGGATGCAGAGCTGGGGTCTCAAGACTCTGTAGCCGCAGAAAGTCTCCTGACCTCTCCAGCTTTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| CDS-3UTR CAA 90 bp | ACACCTTGTACCAGGAATTGGGGCAAGCCTGGGATGTCAATGCCTATGGAAAGATCCAACTTGGAAAGCTaGGTGTCGGGTGGCACTGCG | + |
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Preference number: 5 (lower is better) Translates to: TPCTRNWGKPGMSMPMERSNLES*VSGGTA Trigger: CGCAGTGCCACCCGACACCAAGCTTTCCAAGTTGGA...TCTTTCCATAGGCATTGACATCCCAGGCTTGCCCCAATTCCTGGTACAAGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| CDS-3UTR CAA 90 bp | ACACCTTGTACCAGGAATTGGGGCAAGCCTGGGATGTCAATGCCTATGGAAAGATCCTGCCTTGTCCTGTaGATGCGACTCCTCTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: TPCTRNWGKPGMSMPMERSCLVL*MRLLFL Trigger: CAGGAAGAGGAGTCGCATCAACAGGACAAGGCAGGA...TCTTTCCATAGGCATTGACATCCCAGGCTTGCCCCAATTCCTGGTACAAGGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| CDS TCA 72 bp | ACTGCGGGCAGAGCAGCCTGCAGGGCCAGAAAGGCCTaGCGAAGCGTCTTCACCCGAGTCCGTTCCCGTGCT | + |
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Preference number: 6 (lower is better) Translates to: TAGRAACRARKA*RSVFTRVRSRA Trigger: AGCACGGGAACGGACTCGGGTGAAGACGCTTCGTCAGGCCTTTCTGGCCCTGCAGGCTGCTCTGCCCGCAGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| CDS TCA 72 bp | AGGCAGGGCCAGGCAACTCATGGCCGAGGGTCCGGGTaGGGTGGGCAATGTAGCTTGTGGCCAGCACGAGCA | + |
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Preference number: 6 (lower is better) Translates to: RQGQATHGRGSG*GGQCSLWPARA Trigger: TGCTCGTGCTGGCCACAAGCTACATTGCCCACCTCACCCGGACCCTCGGCCATGAGTTGCCTGGCCCTGCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| CDS TCA 72 bp | GGAGAGGTCAGGAGACTTTCTGCGGCTACAGAGTCTTaGGACCCCAGCTCTGCATCCTTGCATCTTTGGCCG | + |
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Preference number: 6 (lower is better) Translates to: GEVRRLSAATES*DPSSASLHLWP Trigger: CGGCCAAAGATGCAAGGATGCAGAGCTGGGGTCTCAAGACTCTGTAGCCGCAGAAAGTCTCCTGACCTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| CDS CAA 72 bp | CAGCTAGTGTCCTCCCACAGGTCCTGCCTTGTCCTGTaGATGCGACTCCTCTTCCTGTCAGTGCCTAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: QLVSSHRSCLVL*MRLLFLSVPRS Trigger: GCTTCTAGGCACTGACAGGAAGAGGAGTCGCATCAACAGGACAAGGCAGGACCTGTGGGAGGACACTAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| CDS TCA 72 bp | TCAGTGCCTAGAAGCCACCGTGCCTTGGCCTTATTATaGCCATGCCCTTCTCCTGGCATTGCTGGTGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: SVPRSHRALALL*PCPSPGIAGAS Trigger: AGAGGCACCAGCAATGCCAGGAGAAGGGCATGGTCATAATAAGGCCAAGGCACGGTGGCTTCTAGGCACTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| CDS CCA 72 bp | AGCATCCCAAGCCTCCTGCATAGAGACGAGATCGCATaGGCCACTTCTTTAGCGGGTGCAAGTAACGGAGTC | + |
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Preference number: 6 (lower is better) Translates to: SIPSLLHRDEIA*ATSLAGASNGV Trigger: GACTCCGTTACTTGCACCCGCTAAAGAAGTGGCCCATGCGATCTCGTCTCTATGCAGGAGGCTTGGGATGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| CDS CAA 72 bp | TGGAGAGGTCAGGAGACTTTCTGCGGCTACAGAGTCTaGAGACCCCAGCTCTGCATCCTTGCATCTTTGGCC | + |
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Preference number: 6 (lower is better) Translates to: WRGQETFCGYRV*RPQLCILASLA Trigger: GGCCAAAGATGCAAGGATGCAGAGCTGGGGTCTCAAGACTCTGTAGCCGCAGAAAGTCTCCTGACCTCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| CDS CAA 90 bp | ACCAAAAGCTGGAGAGGTCAGGAGACTTTCTGCGGCTACAGAGTCTaGAGACCCCAGCTCTGCATCCTTGCATCTTTGGCCGGTCGTGAT | + |
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Preference number: 6 (lower is better) Translates to: TKSWRGQETFCGYRV*RPQLCILASLAGRD Trigger: ATCACGACCGGCCAAAGATGCAAGGATGCAGAGCTGGGGTCTCAAGACTCTGTAGCCGCAGAAAGTCTCCTGACCTCTCCAGCTTTTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| CDS CCA 72 bp | TCCTCTTCCTGTCAGTGCCTAGAAGCCACCGTGCCTTaGCCTTATTATGACCATGCCCTTCTCCTGGCATTG | + |
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Preference number: 6 (lower is better) Translates to: SSSCQCLEATVP*PYYDHALLLAL Trigger: CAATGCCAGGAGAAGGGCATGGTCATAATAAGGCCAAGGCACGGTGGCTTCTAGGCACTGACAGGAAGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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| CDS GCA 72 bp | TTTGTTACCAAAAGCTGGAGAGGTCAGGAGACTTTCTaGGGCTACAGAGTCTTGAGACCCCAGCTCTGCATC | + |
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Preference number: 6 (lower is better) Translates to: FVTKSWRGQETF*GYRVLRPQLCI Trigger: GATGCAGAGCTGGGGTCTCAAGACTCTGTAGCCGCAGAAAGTCTCCTGACCTCTCCAGCTTTTGGTAACAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006818.4 |
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