Pregenerated sensors for TCF21 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045680Ensembl transcript IDs: ENSMUST00000049930.9, ENSMUST00000218002.2
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AATCACTCGCGGGCTCGGGGCGCTTGGTGCAGAGAGCCAGGGCGCTaGGTGGAGCCCGCGCGGAGGTTCCCAGAGATGCTAGGGCGGCGA | + |
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Preference number: 1 (lower is better) Translates to: NHSRARGAWCREPGR*VEPARRFPEMLGRR Trigger: TCGCCGCCCTAGCATCTCTGGGAACCTCCGCGCGGGCTCCACGCAGCGCCCTGGCTCTCTGCACCAAGCGCCCCGAGCCCGCGAGTGATT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218002.2 |
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| 3UTR CCA 90 bp | GCCACGTCAAACCCTAGCACAAATCACTCGCGGGCTCGGGGCGCTTaGTGCAGAGAGCCAGGGCGCTGCGTGGAGCCCGCGCGGAGGTTC | + |
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Preference number: 1 (lower is better) Translates to: ATSNPSTNHSRARGA*CREPGRCVEPARRF Trigger: GAACCTCCGCGCGGGCTCCACGCAGCGCCCTGGCTCTCTGCACCAAGCGCCCCGAGCCCGCGAGTGATTTGTGCTAGGGTTTGACGTGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218002.2 |
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| 3UTR GCA 90 bp | ACGTCAAACCCTAGCACAAATCACTCGCGGGCTCGGGGCGCTTGGTaGAGAGAGCCAGGGCGCTGCGTGGAGCCCGCGCGGAGGTTCCCA | + |
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Preference number: 1 (lower is better) Translates to: TSNPSTNHSRARGAW*REPGRCVEPARRFP Trigger: TGGGAACCTCCGCGCGGGCTCCACGCAGCGCCCTGGCTCTCTGCACCAAGCGCCCCGAGCCCGCGAGTGATTTGTGCTAGGGTTTGACGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218002.2 |
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| 3UTR CCA 90 bp | GCTCAGTTTCACGACAGAGGAAATGGCACCCTGCGCGGGGATCCCTaGTCTTTGCCAACTGAATACCCTCGGAAATCCCTTAATGGGGTG | + |
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Preference number: 1 (lower is better) Translates to: AQFHDRGNGTLRGDP*SLPTEYPRKSLNGV Trigger: CACCCCATTAAGGGATTTCCGAGGGTATTCAGTTGGCAAAGACCAGGGATCCCCGCGCAGGGTGCCATTTCCTCTGTCGTGAAACTGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218002.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTGGGTGCCCAGCGTCTGCTCAGTTTCACGACAGAGGAAATGGCACCCTGCGCTGGTCTTTGCCAACTaGATACCCTCGGAAATCCCT | + |
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Preference number: 2 (lower is better) Translates to: FWVPSVCSVSRQRKWHPALVFAN*IPSEIP Trigger: AGGGATTTCCGAGGGTATTCAGTTGGCAAAGACCAG...CGCAGGGTGCCATTTCCTCTGTCGTGAAACTGAGCAGACGCTGGGCACCCAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218002.2 |
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| 3UTR-3UTR CCA 90 bp | AATTACATATTGCACTTGGACCAGCCAGGCTTGCAGTCATTCATGGCAGAAGTTAGTGTTCTTGCGGGGTaGGATAGGGAGAGGAGCGAT | + |
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Preference number: 2 (lower is better) Translates to: NYILHLDQPGLQSFMAEVSVLAG*DRERSD Trigger: ATCGCTCCTCTCCCTATCCCACCCCGCAAGAACACT...AACTTCTGCCATGAATGACTGCAAGCCTGGCTGGTCCAAGTGCAATATGTAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049930.9 |
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| 3UTR-3UTR GCA 90 bp | GCTTTTCAAAAATTAGGCTCATTCATTGTGACTGGTAGTAGAACCCATGGCTGTGATAGGTCTTCTGGGTaGCCAGCGTCTGCTCAGTTT | + |
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Preference number: 2 (lower is better) Translates to: AFQKLGSFIVTGSRTHGCDRSSG*PASAQF Trigger: AAACTGAGCAGACGCTGGGCACCCAGAAGACCTATC...ACAGCCATGGGTTCTACTACCAGTCACAATGAATGAGCCTAATTTTTGAAAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218002.2 |
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| 3UTR-3UTR GCA 90 bp | GCTTTTCAAAAATTAGGCTCATTCATTGTGACTGGTAGTAGAACCCATGGCTGTAGCGGATTTACTGATTaGGTTGACAGTGGCTGGAAT | + |
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Preference number: 2 (lower is better) Translates to: AFQKLGSFIVTGSRTHGCSGFTD*VDSGWN Trigger: ATTCCAGCCACTGTCAACGCAATCAGTAAATCCGCT...ACAGCCATGGGTTCTACTACCAGTCACAATGAATGAGCCTAATTTTTGAAAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218002.2 |
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| 3UTR GCA 72 bp | CCTAGCACAAATCACTCGCGGGCTCGGGGCGCTTGGTaGAGAGAGCCAGGGCGCTGCGTGGAGCCCGCGCGG | + |
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Preference number: 3 (lower is better) Translates to: PSTNHSRARGAW*REPGRCVEPAR Trigger: CCGCGCGGGCTCCACGCAGCGCCCTGGCTCTCTGCACCAAGCGCCCCGAGCCCGCGAGTGATTTGTGCTAGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218002.2 |
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| 3UTR-3UTR CAA 90 bp | GTGCCCAGCGTCTGCTCAGTTTCACGACAGAGGAAATGGCACCCTGCGCGGGGAGCGGGCTCGGGGCGCTaGGTGCAGAGAGCCAGGGCG | + |
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Preference number: 3 (lower is better) Translates to: VPSVCSVSRQRKWHPARGAGSGR*VQRARA Trigger: CGCCCTGGCTCTCTGCACCAAGCGCCCCGAGCCCGC...TCCCCGCGCAGGGTGCCATTTCCTCTGTCGTGAAACTGAGCAGACGCTGGGCAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218002.2 |
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| 3UTR GCA 72 bp | AGGGAAGGGCAGGGGTCGTCACCCTTGCCGGCCCACTaGCCCCAGAGCTCACGGTTCCCAGACTCGCACCTC | + |
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Preference number: 3 (lower is better) Translates to: REGQGSSPLPAH*PQSSRFPDSHL Trigger: GAGGTGCGAGTCTGGGAACCGTGAGCTCTGGGGGCAGTGGGCCGGCAAGGGTGACGACCCCTGCCCTTCCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049930.9 |
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| 3UTR GCA 72 bp | CGTCTGCTCAGTTTCACGACAGAGGAAATGGCACCCTaGGCGGGGATCCCTGGTCTTTGCCAACTGAATACC | + |
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Preference number: 3 (lower is better) Translates to: RLLSFTTEEMAP*AGIPGLCQLNT Trigger: GGTATTCAGTTGGCAAAGACCAGGGATCCCCGCGCAGGGTGCCATTTCCTCTGTCGTGAAACTGAGCAGACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218002.2 |
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| 3UTR CCA 72 bp | CACGACAGAGGAAATGGCACCCTGCGCGGGGATCCCTaGTCTTTGCCAACTGAATACCCTCGGAAATCCCTT | + |
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Preference number: 3 (lower is better) Translates to: HDRGNGTLRGDP*SLPTEYPRKSL Trigger: AAGGGATTTCCGAGGGTATTCAGTTGGCAAAGACCAGGGATCCCCGCGCAGGGTGCCATTTCCTCTGTCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218002.2 |
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| 3UTR-3UTR CAA 90 bp | TATAATTACATATTGCACTTGGACCAGCCAGGCTTGCAGTCATTCATGGCAGAATACAGTTGGTCTCCTTaGGTTTGGAAACGAATCTCC | + |
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Preference number: 3 (lower is better) Translates to: YNYILHLDQPGLQSFMAEYSWSP*VWKRIS Trigger: GGAGATTCGTTTCCAAACCAAAGGAGACCAACTGTA...TTCTGCCATGAATGACTGCAAGCCTGGCTGGTCCAAGTGCAATATGTAATTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049930.9 |
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| 3UTR CCA 72 bp | ATGAGAATCGGTAAGTACAGTTGGTCTCCTTTGGTTTaGAAACGAATCTCCTCGTCGCAGTTAAGTGTTCTT | + |
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Preference number: 3 (lower is better) Translates to: MRIGKYSWSPLV*KRISSSQLSVL Trigger: AAGAACACTTAACTGCGACGAGGAGATTCGTTTCCAAACCAAAGGAGACCAACTGTACTTACCGATTCTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049930.9 |
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| 3UTR GCA 72 bp | AATACCTCTGAGAAAGTCGATTCAGGAACCAGCACTTaGTTTTCAAAAATTAGGCTCATTCATTGTGACTGG | + |
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Preference number: 3 (lower is better) Translates to: NTSEKVDSGTST*FSKIRLIHCDW Trigger: CCAGTCACAATGAATGAGCCTAATTTTTGAAAAGCAAGTGCTGGTTCCTGAATCGACTTTCTCAGAGGTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218002.2 |
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| CDS-3UTR GCA 90 bp | CCAGGGCGCTGCGTGGAGCCCGCGCGGAGGTTCCCAGAGATGCTAGGGCGGCGAGCGCCTTCCTCCTCTTaGCTAGGCCACCGCGACCCT | + |
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Preference number: 4 (lower is better) Translates to: PGRCVEPARRFPEMLGRRAPSSS*LGHRDP Trigger: AGGGTCGCGGTGGCCTAGGCAAGAGGAGGAAGGCGC...TCGCCGCCCTAGCATCTCTGGGAACCTCCGCGCGGGCTCCACGCAGCGCCCTGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218002.2 |
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| CDS-3UTR CCA 90 bp | CCAGGGCGCTGCGTGGAGCCCGCGCGGAGGTTCCCAGAGATGCTAGGGCGGCGATTGGCCGCGTTGCGCTaGACCTGCTTGCCCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: PGRCVEPARRFPEMLGRRLAALR*TCLPSW Trigger: CCAGGAGGGCAAGCAGGTCCAGCGCAACGCGGCCAA...TCGCCGCCCTAGCATCTCTGGGAACCTCCGCGCGGGCTCCACGCAGCGCCCTGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218002.2 |
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| CDS-3UTR GCA 90 bp | AGGGGTCGTCACCCTTGCCGGCCCACTGCCCCCAGAGCTCACGGTTCCCAGACTGAGCATTGGCCGCGTTaGGCTGGACCTGCTTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: RGRHPCRPTAPRAHGSQTEHWPR*AGPACP Trigger: AGGGCAAGCAGGTCCAGCGCAACGCGGCCAATGCTC...AGTCTGGGAACCGTGAGCTCTGGGGGCAGTGGGCCGGCAAGGGTGACGACCCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049930.9 |
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| CDS-3UTR CCA 90 bp | GTGCCCAGCGTCTGCTCAGTTTCACGACAGAGGAAATGGCACCCTGCGCGGGGACCCGCTCACGAGCATTaGCCGCGTTGCGCTGGACCT | + |
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Preference number: 4 (lower is better) Translates to: VPSVCSVSRQRKWHPARGPAHEH*PRCAGP Trigger: AGGTCCAGCGCAACGCGGCCAATGCTCGTGAGCGGG...TCCCCGCGCAGGGTGCCATTTCCTCTGTCGTGAAACTGAGCAGACGCTGGGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218002.2 |
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| CDS-3UTR GCA 90 bp | AGGGGTCGTCACCCTTGCCGGCCCACTGCCCCCAGAGCTCACGGTTCCCAGACTTGGAGCCCTCCTCGGTaGTCTCGTTGGAAGTTCCAA | + |
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Preference number: 4 (lower is better) Translates to: RGRHPCRPTAPRAHGSQTWSPPR*SRWKFQ Trigger: TTGGAACTTCCAACGAGAGCACCGAGGAGGGCTCCA...AGTCTGGGAACCGTGAGCTCTGGGGGCAGTGGGCCGGCAAGGGTGACGACCCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049930.9 |
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| CDS-3UTR CCA 90 bp | CCAGGGCGCTGCGTGGAGCCCGCGCGGAGGTTCCCAGAGATGCTAGGGCGGCGAACTCACCAGGTTGACTaGGTGAATGTAACCGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: PGRCVEPARRFPEMLGRRTHQVD*VNVTVL Trigger: GAGAACGGTTACATTCACCCAGTCAACCTGGTGAGT...TCGCCGCCCTAGCATCTCTGGGAACCTCCGCGCGGGCTCCACGCAGCGCCCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218002.2 |
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| CDS-3UTR CCA 90 bp | CAGTTAAGTGTTCTTGCGGGGTGGGATAGGGAGAGGAGCGATGCAAGGCACCAGACCTGCTTGCCCTCCTaGCTGACCCCGCTGAGCGGG | + |
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Preference number: 4 (lower is better) Translates to: QLSVLAGWDRERSDARHQTCLPS*LTPLSG Trigger: CCCGCTCAGCGGGGTCAGCCAGGAGGGCAAGCAGGT...CTGGTGCCTTGCATCGCTCCTCTCCCTATCCCACCCCGCAAGAACACTTAACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049930.9 |
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| CDS-3UTR CCA 90 bp | AGGGGTCGTCACCCTTGCCGGCCCACTGCCCCCAGAGCTCACGGTTCCCAGACTCCTCGGTGCTCTCGTTaGAAGTTCCAAACTCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: RGRHPCRPTAPRAHGSQTPRCSR*KFQTPC Trigger: ACAAGGAGTTTGGAACTTCCAACGAGAGCACCGAGG...AGTCTGGGAACCGTGAGCTCTGGGGGCAGTGGGCCGGCAAGGGTGACGACCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049930.9 |
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| CDS-3UTR TCA 90 bp | GTGCCCAGCGTCTGCTCAGTTTCACGACAGAGGAAATGGCACCCTGCGCGGGGAGAGGACTCACCAGGTTaGCTGGGTGAATGTAACCGT | + |
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Preference number: 4 (lower is better) Translates to: VPSVCSVSRQRKWHPARGEDSPG*LGECNR Trigger: ACGGTTACATTCACCCAGTCAACCTGGTGAGTCCTC...TCCCCGCGCAGGGTGCCATTTCCTCTGTCGTGAAACTGAGCAGACGCTGGGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218002.2 |
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| CDS-3UTR CCA 90 bp | AAACGAATCTCCTCGTCGCAGTTAAGTGTTCTTGCGGGGTGGGATAGGGAGAGGCCCGCTCACGAGCATTaGCCGCGTTGCGCTGGACCT | + |
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Preference number: 4 (lower is better) Translates to: KRISSSQLSVLAGWDRERPAHEH*PRCAGP Trigger: AGGTCCAGCGCAACGCGGCCAATGCTCGTGAGCGGG...CCTCTCCCTATCCCACCCCGCAAGAACACTTAACTGCGACGAGGAGATTCGTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049930.9 |
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| CDS-3UTR GCA 90 bp | TCTCCTTTGGTTTGGAAACGAATCTCCTCGTCGCAGTTAAGTGTTCTTGCGGGGGCGCCTTCCTCCTCTTaGCTAGGCCACCGCGACCCT | + |
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Preference number: 4 (lower is better) Translates to: SPLVWKRISSSQLSVLAGAPSSS*LGHRDP Trigger: AGGGTCGCGGTGGCCTAGGCAAGAGGAGGAAGGCGC...CCCCGCAAGAACACTTAACTGCGACGAGGAGATTCGTTTCCAAACCAAAGGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049930.9 |
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| CDS-3UTR CCA 90 bp | TTCTGGGTGCCCAGCGTCTGCTCAGTTTCACGACAGAGGAAATGGCACCCTGCGCCTCGGTGCTCTCGTTaGAAGTTCCAAACTCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: FWVPSVCSVSRQRKWHPAPRCSR*KFQTPC Trigger: ACAAGGAGTTTGGAACTTCCAACGAGAGCACCGAGG...CGCAGGGTGCCATTTCCTCTGTCGTGAAACTGAGCAGACGCTGGGCACCCAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218002.2 |
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| 3UTR CAA 72 bp | AGAGGAAATGGCACCCTGCGCGGGGATCCCTGGTCTTaGCCAACTGAATACCCTCGGAAATCCCTTAATGGG | + |
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Preference number: 4 (lower is better) Translates to: RGNGTLRGDPWS*PTEYPRKSLNG Trigger: CCCATTAAGGGATTTCCGAGGGTATTCAGTTGGCAAAGACCAGGGATCCCCGCGCAGGGTGCCATTTCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218002.2 |
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| CDS-3UTR CCA 90 bp | TCTCCTTTGGTTTGGAAACGAATCTCCTCGTCGCAGTTAAGTGTTCTTGCGGGGACCCGTTCTCGCAGTTaGAGCCCTCCTCGGTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: SPLVWKRISSSQLSVLAGTRSRS*SPPRCS Trigger: AGAGCACCGAGGAGGGCTCCAACTGCGAGAACGGGT...CCCCGCAAGAACACTTAACTGCGACGAGGAGATTCGTTTCCAAACCAAAGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049930.9 |
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| CDS-3UTR CCA 90 bp | TGGTCTTTGCCAACTGAATACCCTCGGAAATCCCTTAATGGGGTGCCACGTCAAACCCGTTCTCGCAGTTaGAGCCCTCCTCGGTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: WSLPTEYPRKSLNGVPRQTRSRS*SPPRCS Trigger: AGAGCACCGAGGAGGGCTCCAACTGCGAGAACGGGT...TTGACGTGGCACCCCATTAAGGGATTTCCGAGGGTATTCAGTTGGCAAAGACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218002.2 |
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| CDS-3UTR CCA 90 bp | AATTACATATTGCACTTGGACCAGCCAGGCTTGCAGTCATTCATGGCAGAAGTTTTGGCCGCGTTGCGCTaGACCTGCTTGCCCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: NYILHLDQPGLQSFMAEVLAALR*TCLPSW Trigger: CCAGGAGGGCAAGCAGGTCCAGCGCAACGCGGCCAA...AACTTCTGCCATGAATGACTGCAAGCCTGGCTGGTCCAAGTGCAATATGTAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049930.9 |
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| CDS-3UTR CCA 90 bp | TCGCAGTTAAGTGTTCTTGCGGGGTGGGATAGGGAGAGGAGCGATGCAAGGCACCTTCAGGTCATTCTCTaGTTTGCCGGCCACCATAAA | + |
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Preference number: 4 (lower is better) Translates to: SQLSVLAGWDRERSDARHLQVIL*FAGHHK Trigger: TTTATGGTGGCCGGCAAACCAGAGAATGACCTGAAG...GTGCCTTGCATCGCTCCTCTCCCTATCCCACCCCGCAAGAACACTTAACTGCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049930.9 |
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| CDS-3UTR GCA 90 bp | GAATACCCTCGGAAATCCCTTAATGGGGTGCCACGTCAAACCCTAGCACAAATCTGGAGCCCTCCTCGGTaGTCTCGTTGGAAGTTCCAA | + |
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Preference number: 4 (lower is better) Translates to: EYPRKSLNGVPRQTLAQIWSPPR*SRWKFQ Trigger: TTGGAACTTCCAACGAGAGCACCGAGGAGGGCTCCA...GATTTGTGCTAGGGTTTGACGTGGCACCCCATTAAGGGATTTCCGAGGGTATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218002.2 |
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| CDS-3UTR CCA 90 bp | GCTTTTCAAAAATTAGGCTCATTCATTGTGACTGGTAGTAGAACCCATGGCTGTACCTGCTTGCCCTCCTaGCTGACCCCGCTGAGCGGG | + |
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Preference number: 4 (lower is better) Translates to: AFQKLGSFIVTGSRTHGCTCLPS*LTPLSG Trigger: CCCGCTCAGCGGGGTCAGCCAGGAGGGCAAGCAGGT...ACAGCCATGGGTTCTACTACCAGTCACAATGAATGAGCCTAATTTTTGAAAAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000218002.2 |
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| CDS-3UTR TCA 90 bp | TGGTCTTTGCCAACTGAATACCCTCGGAAATCCCTTAATGGGGTGCCACGTCAAAGCATCTCCACCTCTTaGAGGTCTTCTACATCGCTG | + |
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Preference number: 4 (lower is better) Translates to: WSLPTEYPRKSLNGVPRQSISTS*RSSTSL Trigger: CAGCGATGTAGAAGACCTTCAAGAGGTGGAGATGCT...TTGACGTGGCACCCCATTAAGGGATTTCCGAGGGTATTCAGTTGGCAAAGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218002.2 |
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| CDS-3UTR CCA 90 bp | AATTACATATTGCACTTGGACCAGCCAGGCTTGCAGTCATTCATGGCAGAAGTTACCGCGACCCTTCTGTaGAGACCCGTTCTCGCAGTT | + |
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Preference number: 4 (lower is better) Translates to: NYILHLDQPGLQSFMAEVTATLL*RPVLAV Trigger: AACTGCGAGAACGGGTCTCCACAGAAGGGTCGCGGT...AACTTCTGCCATGAATGACTGCAAGCCTGGCTGGTCCAAGTGCAATATGTAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049930.9 |
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| CDS-3UTR TCA 90 bp | TACAGTTGGTCTCCTTTGGTTTGGAAACGAATCTCCTCGTCGCAGTTAAGTGTTAGGGCCACGTCAGGTTaGCTGGGTGAATGTAACCGT | + |
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Preference number: 4 (lower is better) Translates to: YSWSPLVWKRISSSQLSVRATSG*LGECNR Trigger: ACGGTTACATTCACCCAGTCAACCTGACGTGGCCCT...AACACTTAACTGCGACGAGGAGATTCGTTTCCAAACCAAAGGAGACCAACTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049930.9 |
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| CDS-3UTR CCA 90 bp | CAAAAGAGACAAAGTAAGATAGGTCTTCTGGGTGCCCAGCGTCTGCTCAGTTTCTCTCGTACTTGTCGTTaGCCAGGATCTGCCTTAAGT | + |
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Preference number: 4 (lower is better) Translates to: QKRQSKIGLLGAQRLLSFSRTCR*PGSALS Trigger: ACTTAAGGCAGATCCTGGCCAACGACAAGTACGAGA...GAAACTGAGCAGACGCTGGGCACCCAGAAGACCTATCTTACTTTGTCTCTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218002.2 |
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| CDS-3UTR CCA 90 bp | TACAGTTGGTCTCCTTTGGTTTGGAAACGAATCTCCTCGTCGCAGTTAAGTGTTTTCCACACAAGCGGTTaGCGGTCACCACTTCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: YSWSPLVWKRISSSQLSVFHTSG*RSPLPS Trigger: TGAAGGAAGTGGTGACCGCCAACCGCTTGTGTGGAA...AACACTTAACTGCGACGAGGAGATTCGTTTCCAAACCAAAGGAGACCAACTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049930.9 |
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| CDS-3UTR TCA 90 bp | AATTACATATTGCACTTGGACCAGCCAGGCTTGCAGTCATTCATGGCAGAAGTTAGCATCTCCACCTCTTaGAGGTCTTCTACATCGCTG | + |
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Preference number: 4 (lower is better) Translates to: NYILHLDQPGLQSFMAEVSISTS*RSSTSL Trigger: CAGCGATGTAGAAGACCTTCAAGAGGTGGAGATGCT...AACTTCTGCCATGAATGACTGCAAGCCTGGCTGGTCCAAGTGCAATATGTAATT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049930.9 |
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| CDS-3UTR CCA 90 bp | TATAATTACATATTGCACTTGGACCAGCCAGGCTTGCAGTCATTCATGGCAGAATCTCGTACTTGTCGTTaGCCAGGATCTGCCTTAAGT | + |
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Preference number: 4 (lower is better) Translates to: YNYILHLDQPGLQSFMAESRTCR*PGSALS Trigger: ACTTAAGGCAGATCCTGGCCAACGACAAGTACGAGA...TTCTGCCATGAATGACTGCAAGCCTGGCTGGTCCAAGTGCAATATGTAATTATA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049930.9 |
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| 3UTR CAA 72 bp | ATATATAATTACATATTGCACTTGGACCAGCCAGGCTaGCAGTCATTCATGGCAGAAGTTAATCAAGTTAAA | + |
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Preference number: 4 (lower is better) Translates to: IYNYILHLDQPG*QSFMAEVNQVK Trigger: TTTAACTTGATTAACTTCTGCCATGAATGACTGCAAGCCTGGCTGGTCCAAGTGCAATATGTAATTATATAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049930.9 |
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| CDS-3UTR CAA 90 bp | GTGCCCAGCGTCTGCTCAGTTTCACGACAGAGGAAATGGCACCCTGCGCGGGGAGGCGCCTTCCTCCTCTaGCCTAGGCCACCGCGACCC | + |
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Preference number: 5 (lower is better) Translates to: VPSVCSVSRQRKWHPARGGAFLL*PRPPRP Trigger: GGGTCGCGGTGGCCTAGGCAAGAGGAGGAAGGCGCC...TCCCCGCGCAGGGTGCCATTTCCTCTGTCGTGAAACTGAGCAGACGCTGGGCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218002.2 |
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| CDS-3UTR CAA 90 bp | GCCACGTCAAACCCTAGCACAAATCACTCGCGGGCTCGGGGCGCTTGGTGCAGAGCCCGCTCACGAGCATaGGCCGCGTTGCGCTGGACC | + |
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Preference number: 5 (lower is better) Translates to: ATSNPSTNHSRARGAWCRARSRA*AALRWT Trigger: GGTCCAGCGCAACGCGGCCAATGCTCGTGAGCGGGC...TCTGCACCAAGCGCCCCGAGCCCGCGAGTGATTTGTGCTAGGGTTTGACGTGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218002.2 |
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| CDS-3UTR CAA 90 bp | CCAGGGCGCTGCGTGGAGCCCGCGCGGAGGTTCCCAGAGATGCTAGGGCGGCGAGTTCCAAACTCCTTGTaGGAGTCCACTTTCAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: PGRCVEPARRFPEMLGRRVPNSL*ESTFRE Trigger: CTCCCTGAAAGTGGACTCCAACAAGGAGTTTGGAAC...TCGCCGCCCTAGCATCTCTGGGAACCTCCGCGCGGGCTCCACGCAGCGCCCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218002.2 |
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| CDS TCA 90 bp | CCGCGTCCCCAGGCCCAGCCAGAGGCGCGGGAGGACTCACCAGGTTaGCTGGGTGAATGTAACCGTTCTCGTACTTGTCGTTGGCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: PRPQAQPEAREDSPG*LGECNRSRTCRWPG Trigger: TCCTGGCCAACGACAAGTACGAGAACGGTTACATTCACCCAGTCAACCTGGTGAGTCCTCCCGCGCCTCTGGCTGGGCCTGGGGACGCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218002.2 |
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| CDS-3UTR CAA 90 bp | TCGCAGTTAAGTGTTCTTGCGGGGTGGGATAGGGAGAGGAGCGATGCAAGGCACGGCGCCTTCCTCCTCTaGCCTAGGCCACCGCGACCC | + |
|
Preference number: 5 (lower is better) Translates to: SQLSVLAGWDRERSDARHGAFLL*PRPPRP Trigger: GGGTCGCGGTGGCCTAGGCAAGAGGAGGAAGGCGCC...GTGCCTTGCATCGCTCCTCTCCCTATCCCACCCCGCAAGAACACTTAACTGCGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049930.9 |
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| CDS CCA 90 bp | GTCCCCAGGCCCAGCCAGAGGCGCGGGAGGACTCACCAGGTTGACTaGGTGAATGTAACCGTTCTCGTACTTGTCGTTGGCCAGGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: VPRPSQRRGRTHQVD*VNVTVLVLVVGQDL Trigger: CAGATCCTGGCCAACGACAAGTACGAGAACGGTTACATTCACCCAGTCAACCTGGTGAGTCCTCCCGCGCCTCTGGCTGGGCCTGGGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218002.2 |
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| CDS-3UTR CAA 90 bp | AAACGAATCTCCTCGTCGCAGTTAAGTGTTCTTGCGGGGTGGGATAGGGAGAGGGCCCGCTCACGAGCATaGGCCGCGTTGCGCTGGACC | + |
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Preference number: 5 (lower is better) Translates to: KRISSSQLSVLAGWDRERARSRA*AALRWT Trigger: GGTCCAGCGCAACGCGGCCAATGCTCGTGAGCGGGC...CCTCTCCCTATCCCACCCCGCAAGAACACTTAACTGCGACGAGGAGATTCGTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049930.9 |
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| CDS CCA 90 bp | TGCCTAGGCCACCGCGACCCTTCTGTGGAGACCCGTTCTCGCAGTTaGAGCCCTCCTCGGTGCTCTCGTTGGAAGTTCCAAACTCCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: CLGHRDPSVETRSRS*SPPRCSRWKFQTPC Trigger: ACAAGGAGTTTGGAACTTCCAACGAGAGCACCGAGGAGGGCTCCAACTGCGAGAACGGGTCTCCACAGAAGGGTCGCGGTGGCCTAGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049930.9 ENSMUST00000218002.2 |
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| CDS-3UTR CAA 90 bp | CCCTGGTCTTTGCCAACTGAATACCCTCGGAAATCCCTTAATGGGGTGCCACGTTTGCGCTGGACCTGCTaGCCCTCCTGGCTGACCCCG | + |
|
Preference number: 5 (lower is better) Translates to: PWSLPTEYPRKSLNGVPRLRWTC*PSWLTP Trigger: CGGGGTCAGCCAGGAGGGCAAGCAGGTCCAGCGCAA...ACGTGGCACCCCATTAAGGGATTTCCGAGGGTATTCAGTTGGCAAAGACCAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218002.2 |
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| CDS-3UTR CAA 90 bp | AAACGAATCTCCTCGTCGCAGTTAAGTGTTCTTGCGGGGTGGGATAGGGAGAGGCGAGCATTGGCCGCGTaGCGCTGGACCTGCTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: KRISSSQLSVLAGWDRERRALAA*RWTCLP Trigger: GGGCAAGCAGGTCCAGCGCAACGCGGCCAATGCTCG...CCTCTCCCTATCCCACCCCGCAAGAACACTTAACTGCGACGAGGAGATTCGTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049930.9 |
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| CDS-3UTR CAA 90 bp | AAACGAATCTCCTCGTCGCAGTTAAGTGTTCTTGCGGGGTGGGATAGGGAGAGGGACCCGTTCTCGCAGTaGGAGCCCTCCTCGGTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: KRISSSQLSVLAGWDRERDPFSQ*EPSSVL Trigger: GAGCACCGAGGAGGGCTCCAACTGCGAGAACGGGTC...CCTCTCCCTATCCCACCCCGCAAGAACACTTAACTGCGACGAGGAGATTCGTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049930.9 |
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| CDS CCA 90 bp | TCCACACAAGCGGTTGGCGGTCACCACTTCCTTCAGGTCATTCTCTaGTTTGCCGGCCACCATAAAGGGCCACGTCAGGTTGACTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: STQAVGGHHFLQVIL*FAGHHKGPRQVDWV Trigger: CACCCAGTCAACCTGACGTGGCCCTTTATGGTGGCCGGCAAACCAGAGAATGACCTGAAGGAAGTGGTGACCGCCAACCGCTTGTGTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049930.9 |
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| CDS-3UTR CAA 90 bp | GCCACGTCAAACCCTAGCACAAATCACTCGCGGGCTCGGGGCGCTTGGTGCAGACAGCATCTCCACCTCTaGAAGGTCTTCTACATCGCT | + |
|
Preference number: 5 (lower is better) Translates to: ATSNPSTNHSRARGAWCRQHLHL*KVFYIA Trigger: AGCGATGTAGAAGACCTTCAAGAGGTGGAGATGCTG...TCTGCACCAAGCGCCCCGAGCCCGCGAGTGATTTGTGCTAGGGTTTGACGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218002.2 |
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| CDS-3UTR CAA 90 bp | TGGTCTTTGCCAACTGAATACCCTCGGAAATCCCTTAATGGGGTGCCACGTCAACGAGCATTGGCCGCGTaGCGCTGGACCTGCTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: WSLPTEYPRKSLNGVPRQRALAA*RWTCLP Trigger: GGGCAAGCAGGTCCAGCGCAACGCGGCCAATGCTCG...TTGACGTGGCACCCCATTAAGGGATTTCCGAGGGTATTCAGTTGGCAAAGACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218002.2 |
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| CDS-3UTR CAA 90 bp | GAATACCCTCGGAAATCCCTTAATGGGGTGCCACGTCAAACCCTAGCACAAATCGACCCGTTCTCGCAGTaGGAGCCCTCCTCGGTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: EYPRKSLNGVPRQTLAQIDPFSQ*EPSSVL Trigger: GAGCACCGAGGAGGGCTCCAACTGCGAGAACGGGTC...GATTTGTGCTAGGGTTTGACGTGGCACCCCATTAAGGGATTTCCGAGGGTATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218002.2 |
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| CDS GCA 90 bp | GACCCTTCTGTGGAGACCCGTTCTCGCAGTTGGAGCCCTCCTCGGTaGTCTCGTTGGAAGTTCCAAACTCCTTGTTGGAGTCCACTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: DPSVETRSRSWSPPR*SRWKFQTPCWSPLS Trigger: TGAAAGTGGACTCCAACAAGGAGTTTGGAACTTCCAACGAGAGCACCGAGGAGGGCTCCAACTGCGAGAACGGGTCTCCACAGAAGGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049930.9 ENSMUST00000218002.2 |
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| CDS CCA 90 bp | TGGAGCCCTCCTCGGTGCTCTCGTTGGAAGTTCCAAACTCCTTGTTaGAGTCCACTTTCAGGGAGTCACAGTCCAGCATCTCCACCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: WSPPRCSRWKFQTPC*SPLSGSHSPASPPL Trigger: AAGAGGTGGAGATGCTGGACTGTGACTCCCTGAAAGTGGACTCCAACAAGGAGTTTGGAACTTCCAACGAGAGCACCGAGGAGGGCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049930.9 ENSMUST00000218002.2 |
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| CDS-3UTR CAA 90 bp | CAGTTAAGTGTTCTTGCGGGGTGGGATAGGGAGAGGAGCGATGCAAGGCACCAGGTTCCAAACTCCTTGTaGGAGTCCACTTTCAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QLSVLAGWDRERSDARHQVPNSL*ESTFRE Trigger: CTCCCTGAAAGTGGACTCCAACAAGGAGTTTGGAAC...CTGGTGCCTTGCATCGCTCCTCTCCCTATCCCACCCCGCAAGAACACTTAACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049930.9 |
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| CDS-3UTR CAA 90 bp | AATTACATATTGCACTTGGACCAGCCAGGCTTGCAGTCATTCATGGCAGAAGTTTTGCGCTGGACCTGCTaGCCCTCCTGGCTGACCCCG | + |
|
Preference number: 5 (lower is better) Translates to: NYILHLDQPGLQSFMAEVLRWTC*PSWLTP Trigger: CGGGGTCAGCCAGGAGGGCAAGCAGGTCCAGCGCAA...AACTTCTGCCATGAATGACTGCAAGCCTGGCTGGTCCAAGTGCAATATGTAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049930.9 |
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| CDS-3UTR CAA 90 bp | TCGCAGTTAAGTGTTCTTGCGGGGTGGGATAGGGAGAGGAGCGATGCAAGGCACGAAGTTCCAAACTCCTaGTTGGAGTCCACTTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SQLSVLAGWDRERSDARHEVPNS*LESTFR Trigger: CCTGAAAGTGGACTCCAACAAGGAGTTTGGAACTTC...GTGCCTTGCATCGCTCCTCTCCCTATCCCACCCCGCAAGAACACTTAACTGCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049930.9 |
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| CDS-3UTR CAA 90 bp | AAACGAATCTCCTCGTCGCAGTTAAGTGTTCTTGCGGGGTGGGATAGGGAGAGGTCCTCGGTGCTCTCGTaGGAAGTTCCAAACTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: KRISSSQLSVLAGWDRERSSVLS*EVPNSL Trigger: CAAGGAGTTTGGAACTTCCAACGAGAGCACCGAGGA...CCTCTCCCTATCCCACCCCGCAAGAACACTTAACTGCGACGAGGAGATTCGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049930.9 |
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| CDS-3UTR CAA 90 bp | AAACGAATCTCCTCGTCGCAGTTAAGTGTTCTTGCGGGGTGGGATAGGGAGAGGCAGCATCTCCACCTCTaGAAGGTCTTCTACATCGCT | + |
|
Preference number: 5 (lower is better) Translates to: KRISSSQLSVLAGWDRERQHLHL*KVFYIA Trigger: AGCGATGTAGAAGACCTTCAAGAGGTGGAGATGCTG...CCTCTCCCTATCCCACCCCGCAAGAACACTTAACTGCGACGAGGAGATTCGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049930.9 |
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| CDS-3UTR CAA 90 bp | GAATACCCTCGGAAATCCCTTAATGGGGTGCCACGTCAAACCCTAGCACAAATCTCCTCGGTGCTCTCGTaGGAAGTTCCAAACTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: EYPRKSLNGVPRQTLAQISSVLS*EVPNSL Trigger: CAAGGAGTTTGGAACTTCCAACGAGAGCACCGAGGA...GATTTGTGCTAGGGTTTGACGTGGCACCCCATTAAGGGATTTCCGAGGGTATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218002.2 |
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| CDS-3UTR CAA 90 bp | GAATACCCTCGGAAATCCCTTAATGGGGTGCCACGTCAAACCCTAGCACAAATCTTCTCGTACTTGTCGTaGGCCAGGATCTGCCTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: EYPRKSLNGVPRQTLAQIFSYLS*ARICLK Trigger: CTTAAGGCAGATCCTGGCCAACGACAAGTACGAGAA...GATTTGTGCTAGGGTTTGACGTGGCACCCCATTAAGGGATTTCCGAGGGTATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218002.2 |
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| CDS-3UTR CAA 90 bp | TATAATTACATATTGCACTTGGACCAGCCAGGCTTGCAGTCATTCATGGCAGAAGTTCCACACAAGCGGTaGGCGGTCACCACTTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: YNYILHLDQPGLQSFMAEVPHKR*AVTTSF Trigger: GAAGGAAGTGGTGACCGCCAACCGCTTGTGTGGAAC...TTCTGCCATGAATGACTGCAAGCCTGGCTGGTCCAAGTGCAATATGTAATTATA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049930.9 |
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| CDS-3UTR CAA 90 bp | TATAATTACATATTGCACTTGGACCAGCCAGGCTTGCAGTCATTCATGGCAGAAAGGTCATTCTCTGGTTaGCCGGCCACCATAAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: YNYILHLDQPGLQSFMAERSFSG*PATIKG Trigger: GCCCTTTATGGTGGCCGGCAAACCAGAGAATGACCT...TTCTGCCATGAATGACTGCAAGCCTGGCTGGTCCAAGTGCAATATGTAATTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049930.9 |
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| CDS-3UTR CAA 90 bp | AATTACATATTGCACTTGGACCAGCCAGGCTTGCAGTCATTCATGGCAGAAGTTTTCTCGTACTTGTCGTaGGCCAGGATCTGCCTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: NYILHLDQPGLQSFMAEVFSYLS*ARICLK Trigger: CTTAAGGCAGATCCTGGCCAACGACAAGTACGAGAA...AACTTCTGCCATGAATGACTGCAAGCCTGGCTGGTCCAAGTGCAATATGTAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049930.9 |
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| CDS CAA 72 bp | ACCCGCATGCGGGCCCGCTCACGAGCATTGGCCGCGTaGCGCTGGACCTGCTTGCCCTCCTGGCTGACCCCG | + |
|
Preference number: 6 (lower is better) Translates to: TRMRARSRALAA*RWTCLPSWLTP Trigger: CGGGGTCAGCCAGGAGGGCAAGCAGGTCCAGCGCAACGCGGCCAATGCTCGTGAGCGGGCCCGCATGCGGGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049930.9 ENSMUST00000218002.2 |
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| CDS CCA 72 bp | TGCTCAGCACCCGCATGCGGGCCCGCTCACGAGCATTaGCCGCGTTGCGCTGGACCTGCTTGCCCTCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: CSAPACGPAHEH*PRCAGPACPPG Trigger: GCCAGGAGGGCAAGCAGGTCCAGCGCAACGCGGCCAATGCTCGTGAGCGGGCCCGCATGCGGGTGCTGAGCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049930.9 ENSMUST00000218002.2 |
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| CDS CAA 90 bp | CTGACCCCGCTGAGCGGGCTTTTCTTAGTGGGCGCCTTCCTCCTCTaGCCTAGGCCACCGCGACCCTTCTGTGGAGACCCGTTCTCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LTPLSGLFLVGAFLL*PRPPRPFCGDPFSQ Trigger: CTGCGAGAACGGGTCTCCACAGAAGGGTCGCGGTGGCCTAGGCAAGAGGAGGAAGGCGCCCACTAAGAAAAGCCCGCTCAGCGGGGTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049930.9 ENSMUST00000218002.2 |
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| CDS CAA 72 bp | CTGAGCGGGCTTTTCTTAGTGGGCGCCTTCCTCCTCTaGCCTAGGCCACCGCGACCCTTCTGTGGAGACCCG | + |
|
Preference number: 6 (lower is better) Translates to: LSGLFLVGAFLL*PRPPRPFCGDP Trigger: CGGGTCTCCACAGAAGGGTCGCGGTGGCCTAGGCAAGAGGAGGAAGGCGCCCACTAAGAAAAGCCCGCTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049930.9 ENSMUST00000218002.2 |
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| CDS CAA 72 bp | CCACCGCGACCCTTCTGTGGAGACCCGTTCTCGCAGTaGGAGCCCTCCTCGGTGCTCTCGTTGGAAGTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: PPRPFCGDPFSQ*EPSSVLSLEVP Trigger: TGGAACTTCCAACGAGAGCACCGAGGAGGGCTCCAACTGCGAGAACGGGTCTCCACAGAAGGGTCGCGGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049930.9 ENSMUST00000218002.2 |
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| CDS CCA 72 bp | CACCGCGACCCTTCTGTGGAGACCCGTTCTCGCAGTTaGAGCCCTCCTCGGTGCTCTCGTTGGAAGTTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: HRDPSVETRSRS*SPPRCSRWKFQ Trigger: TTGGAACTTCCAACGAGAGCACCGAGGAGGGCTCCAACTGCGAGAACGGGTCTCCACAGAAGGGTCGCGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049930.9 ENSMUST00000218002.2 |
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| CDS CAA 90 bp | TTGCCTAGGCCACCGCGACCCTTCTGTGGAGACCCGTTCTCGCAGTaGGAGCCCTCCTCGGTGCTCTCGTTGGAAGTTCCAAACTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LPRPPRPFCGDPFSQ*EPSSVLSLEVPNSL Trigger: CAAGGAGTTTGGAACTTCCAACGAGAGCACCGAGGAGGGCTCCAACTGCGAGAACGGGTCTCCACAGAAGGGTCGCGGTGGCCTAGGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049930.9 ENSMUST00000218002.2 |
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| CDS TCA 72 bp | CAGGCCCAGCCAGAGGCGCGGGAGGACTCACCAGGTTaGCTGGGTGAATGTAACCGTTCTCGTACTTGTCGT | + |
|
Preference number: 6 (lower is better) Translates to: QAQPEAREDSPG*LGECNRSRTCR Trigger: ACGACAAGTACGAGAACGGTTACATTCACCCAGTCAACCTGGTGAGTCCTCCCGCGCCTCTGGCTGGGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218002.2 |
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| CDS CCA 72 bp | CCCAGCCAGAGGCGCGGGAGGACTCACCAGGTTGACTaGGTGAATGTAACCGTTCTCGTACTTGTCGTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: PSQRRGRTHQVD*VNVTVLVLVVG Trigger: GCCAACGACAAGTACGAGAACGGTTACATTCACCCAGTCAACCTGGTGAGTCCTCCCGCGCCTCTGGCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218002.2 |
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| CDS CCA 72 bp | GCGGTTGGCGGTCACCACTTCCTTCAGGTCATTCTCTaGTTTGCCGGCCACCATAAAGGGCCACGTCAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: AVGGHHFLQVIL*FAGHHKGPRQV Trigger: AACCTGACGTGGCCCTTTATGGTGGCCGGCAAACCAGAGAATGACCTGAAGGAAGTGGTGACCGCCAACCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049930.9 |
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| CDS GCA 72 bp | GTGGAGACCCGTTCTCGCAGTTGGAGCCCTCCTCGGTaGTCTCGTTGGAAGTTCCAAACTCCTTGTTGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: VETRSRSWSPPR*SRWKFQTPCWS Trigger: ACTCCAACAAGGAGTTTGGAACTTCCAACGAGAGCACCGAGGAGGGCTCCAACTGCGAGAACGGGTCTCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049930.9 ENSMUST00000218002.2 |
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| CDS CAA 90 bp | CAGTTGGAGCCCTCCTCGGTGCTCTCGTTGGAAGTTCCAAACTCCTaGTTGGAGTCCACTTTCAGGGAGTCACAGTCCAGCATCTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: QLEPSSVLSLEVPNS*LESTFRESQSSIST Trigger: GGTGGAGATGCTGGACTGTGACTCCCTGAAAGTGGACTCCAACAAGGAGTTTGGAACTTCCAACGAGAGCACCGAGGAGGGCTCCAACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049930.9 ENSMUST00000218002.2 |
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| CDS CAA 90 bp | TGTGGAGACCCGTTCTCGCAGTTGGAGCCCTCCTCGGTGCTCTCGTaGGAAGTTCCAAACTCCTTGTTGGAGTCCACTTTCAGGGAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: CGDPFSQLEPSSVLS*EVPNSLLESTFRES Trigger: TGACTCCCTGAAAGTGGACTCCAACAAGGAGTTTGGAACTTCCAACGAGAGCACCGAGGAGGGCTCCAACTGCGAGAACGGGTCTCCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049930.9 ENSMUST00000218002.2 |
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| CDS CAA 72 bp | CCCTCCTCGGTGCTCTCGTTGGAAGTTCCAAACTCCTaGTTGGAGTCCACTTTCAGGGAGTCACAGTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PSSVLSLEVPNS*LESTFRESQSS Trigger: GCTGGACTGTGACTCCCTGAAAGTGGACTCCAACAAGGAGTTTGGAACTTCCAACGAGAGCACCGAGGAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049930.9 ENSMUST00000218002.2 |
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| CDS CAA 72 bp | TTGGCGGTCACCACTTCCTTCAGGTCATTCTCTGGTTaGCCGGCCACCATAAAGGGCCACGTCAGGTTGACT | + |
|
Preference number: 6 (lower is better) Translates to: LAVTTSFRSFSG*PATIKGHVRLT Trigger: AGTCAACCTGACGTGGCCCTTTATGGTGGCCGGCAAACCAGAGAATGACCTGAAGGAAGTGGTGACCGCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049930.9 |
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| CDS CAA 90 bp | TTGGAGCCCTCCTCGGTGCTCTCGTTGGAAGTTCCAAACTCCTTGTaGGAGTCCACTTTCAGGGAGTCACAGTCCAGCATCTCCACCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LEPSSVLSLEVPNSL*ESTFRESQSSISTS Trigger: AGAGGTGGAGATGCTGGACTGTGACTCCCTGAAAGTGGACTCCAACAAGGAGTTTGGAACTTCCAACGAGAGCACCGAGGAGGGCTCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049930.9 ENSMUST00000218002.2 |
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| CDS TCA 72 bp | ACTTTCAGGGAGTCACAGTCCAGCATCTCCACCTCTTaGAGGTCTTCTACATCGCTGAGGGAGCCAGTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: TFRESQSSISTS*RSSTSLREPVD Trigger: GTCCACTGGCTCCCTCAGCGATGTAGAAGACCTTCAAGAGGTGGAGATGCTGGACTGTGACTCCCTGAAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049930.9 ENSMUST00000218002.2 |
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| CDS CAA 72 bp | CACTTTCAGGGAGTCACAGTCCAGCATCTCCACCTCTaGAAGGTCTTCTACATCGCTGAGGGAGCCAGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: HFQGVTVQHLHL*KVFYIAEGASG Trigger: TCCACTGGCTCCCTCAGCGATGTAGAAGACCTTCAAGAGGTGGAGATGCTGGACTGTGACTCCCTGAAAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049930.9 ENSMUST00000218002.2 |
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