RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TCF20 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000041852

Ensembl transcript IDs: ENSMUST00000048966.7, ENSMUST00000109510.10, ENSMUST00000229439.2, ENSMUST00000229547.2, ENSMUST00000230403.2

Found 708 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTTAGTGCACCCACATGGCTCACGCCACAGTTCTCTCCTAGACTCTaGTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGG +
Preference number: 1 (lower is better)
Translates to: LSAPTWLTPQFSPRL*LFQQQRPGPPWFPW
Trigger: CCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAGGAGAGAACTGTGGCGTGAGCCATGTGGGTGCACTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
3UTR GCA 90 bp GCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATaGTGTGGGTCCCCACAAGGGTACCAACTACATGGAATGTGCCAA +
Preference number: 1 (lower is better)
Translates to: ACFSSRGLGLHGFHG*CGSPQGYQLHGMCQ
Trigger: TTGGCACATTCCATGTAGTTGGTACCCTTGTGGGGACCCACAGCATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
3UTR CCA 90 bp TTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCTGTaGGTCCCCACAAGGGTACCAACTACATGGAATGTGCCAAGGAAA +
Preference number: 1 (lower is better)
Translates to: FQQQRPGPPWFPWML*VPTRVPTTWNVPRK
Trigger: TTTCCTTGGCACATTCCATGTAGTTGGTACCCTTGTGGGGACCCACAGCATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
3UTR CCA 90 bp TGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTACCAACTACATaGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAGCCATTCCTT +
Preference number: 1 (lower is better)
Translates to: WFPWMLWVPTRVPTT*NVPRKEGARDKPFL
Trigger: AAGGAATGGCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCATGTAGTTGGTACCCTTGTGGGGACCCACAGCATCCATGGAAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
3UTR TCA 90 bp TGGTTGTCATTTGTCTACTCTTTCAGTCCAGGGTCTAGTGTTCACTaGATTGTGAGACAGGCTAAAGATCAAAGCCACACCCCATCCTTT +
Preference number: 1 (lower is better)
Translates to: WLSFVYSFSPGSSVH*IVRQAKDQSHTPSF
Trigger: AAAGGATGGGGTGTGGCTTTGATCTTTAGCCTGTCTCACAATTCAGTGAACACTAGACCCTGGACTGAAAGAGTAGACAAATGACAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
3UTR-3UTR CCA 90 bp GCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTGGGCAGAGTGGGGTGTaGTTGCACAGCAGGAGGATT +
Preference number: 2 (lower is better)
Translates to: AEAWASMVSMDAVGPHKGGQSGV*LHSRRI
Trigger: AATCCTCCTGCTGTGCAACCACACCCCACTCTGCCC...ACCCTTGTGGGGACCCACAGCATCCATGGAAACCATGGAGGCCCAGGCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
3UTR-3UTR CCA 90 bp TCACGCCACAGTTCTCTCCTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCAAGGAAGTGCTGGCATaGGCAGGCGCAGCGCAGCGG +
Preference number: 2 (lower is better)
Translates to: SRHSSLLDSACFSSRGLGKEVLA*AGAAQR
Trigger: CCGCTGCGCTGCGCCTGCCCATGCCAGCACTTCCTT...GCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAGGAGAGAACTGTGGCGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
3UTR-3UTR CCA 90 bp CCTGGGCCTCCATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTACCAACTGGGCAGAGTGGGGTGTaGTTGCACAGCAGGAGGATT +
Preference number: 2 (lower is better)
Translates to: PGPPWFPWMLWVPTRVPTGQSGV*LHSRRI
Trigger: AATCCTCCTGCTGTGCAACCACACCCCACTCTGCCC...AGTTGGTACCCTTGTGGGGACCCACAGCATCCATGGAAACCATGGAGGCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
3UTR-3UTR GCA 90 bp CTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGAAACATAGGAAGGAAGTaGTGGCATGGGCAGGCGCAG +
Preference number: 2 (lower is better)
Translates to: LDSACFSSRGLGLHGFHGNIGRK*WHGQAQ
Trigger: CTGCGCCTGCCCATGCCAGCACTTCCTTCCTATGTT...TCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
3UTR-3UTR TCA 90 bp GCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTACACCCCATCCTTTATaGGATGAGTTTGTTCAGTTC +
Preference number: 2 (lower is better)
Translates to: AEAWASMVSMDAVGPHKGTPHPL*DEFVQF
Trigger: GAACTGAACAAACTCATCTCATAAAGGATGGGGTGT...ACCCTTGTGGGGACCCACAGCATCCATGGAAACCATGGAGGCCCAGGCCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
3UTR-3UTR CCA 90 bp CCTGGGCCTCCATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTACCAACTCCCACATTGTCACTATaGAGATTGTGTCCATGGAAA +
Preference number: 2 (lower is better)
Translates to: PGPPWFPWMLWVPTRVPTPTLSL*RLCPWK
Trigger: TTTCCATGGACACAATCTCCATAGTGACAATGTGGG...AGTTGGTACCCTTGTGGGGACCCACAGCATCCATGGAAACCATGGAGGCCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
3UTR-3UTR TCA 90 bp TCACGCCACAGTTCTCTCCTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCACACCCCATCCTTTATaGGATGAGTTTGTTCAGTTC +
Preference number: 2 (lower is better)
Translates to: SRHSSLLDSACFSSRGLGTPHPL*DEFVQF
Trigger: GAACTGAACAAACTCATCTCATAAAGGATGGGGTGT...GCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAGGAGAGAACTGTGGCGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
3UTR-3UTR GCA 90 bp ATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTACCAACTACATGGAATGTAGAGTGGGGTGTGGTTaGACAGCAGGAGGATTCCAT +
Preference number: 2 (lower is better)
Translates to: MVSMDAVGPHKGTNYMECRVGCG*TAGGFH
Trigger: ATGGAATCCTCCTGCTGTGCAACCACACCCCACTCT...ACATTCCATGTAGTTGGTACCCTTGTGGGGACCCACAGCATCCATGGAAACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
3UTR-3UTR CCA 90 bp GACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCCCCACATTGTCACTATaGAGATTGTGTCCATGGAAA +
Preference number: 2 (lower is better)
Translates to: DSACFSSRGLGLHGFHGCPTLSL*RLCPWK
Trigger: TTTCCATGGACACAATCTCCATAGTGACAATGTGGG...GCATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
3UTR-3UTR TCA 90 bp GGGGCCACAGTGATCCAGGATACAGCCATGATGTTGGGGCATCTGCCAATTTCAGGGTCTAGTGTTCACTaGATTGTGAGACAGGCTAAA +
Preference number: 2 (lower is better)
Translates to: GATVIQDTAMMLGHLPISGSSVH*IVRQAK
Trigger: TTTAGCCTGTCTCACAATTCAGTGAACACTAGACCC...TGAAATTGGCAGATGCCCCAACATCATGGCTGTATCCTGGATCACTGTGGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
3UTR-3UTR CCA 90 bp CAATACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTAAGGAAGTGCTGGCATaGGCAGGCGCAGCGCAGCGG +
Preference number: 2 (lower is better)
Translates to: QYNIKNHIAWATYLTSPLKEVLA*AGAAQR
Trigger: CCGCTGCGCTGCGCCTGCCCATGCCAGCACTTCCTT...AAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
3UTR-3UTR CCA 90 bp ATGGAAACAGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGATAGGAAGGAAGTGCTaGCATGGGCAGGCGCAGCGC +
Preference number: 2 (lower is better)
Translates to: METAIPTSCIFLFLWCHQIGRKC*HGQAQR
Trigger: GCGCTGCGCCTGCCCATGCCAGCACTTCCTTCCTAT...CTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCTGTTTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
3UTR-3UTR CCA 90 bp TCACGCCACAGTTCTCTCCTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCATCTTTCTTTTCCTGTaGTGTCACCAGTTTGAGTGT +
Preference number: 2 (lower is better)
Translates to: SRHSSLLDSACFSSRGLGIFLFL*CHQFEC
Trigger: ACACTCAAACTGGTGACACCACAGGAAAAGAAAGAT...GCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAGGAGAGAACTGTGGCGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
3UTR-3UTR CCA 90 bp ATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTACCAACTACATGGAATGTACTCTACATACTTGGTaGGGCCACAGTGATCCAGGA +
Preference number: 2 (lower is better)
Translates to: MVSMDAVGPHKGTNYMECTLHTW*GHSDPG
Trigger: TCCTGGATCACTGTGGCCCCACCAAGTATGTAGAGT...ACATTCCATGTAGTTGGTACCCTTGTGGGGACCCACAGCATCCATGGAAACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
3UTR-3UTR CCA 90 bp AGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGATCTTTCTTTTCCTGTaGTGTCACCAGTTTGAGTGT +
Preference number: 2 (lower is better)
Translates to: RLCLFQQQRPGPPWFPWMIFLFL*CHQFEC
Trigger: ACACTCAAACTGGTGACACCACAGGAAAAGAAAGAT...CATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
3UTR-3UTR TCA 90 bp TGGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAGCCATTCCTTGGGTACACCGTGTTCACTGAATTGTaGGACAGGCTAAAGATCAAA +
Preference number: 2 (lower is better)
Translates to: WNVPRKEGARDKPFLGYTVFTEL*DRLKIK
Trigger: TTTGATCTTTAGCCTGTCTCACAATTCAGTGAACAC...GGTGTACCCAAGGAATGGCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
3UTR-3UTR TCA 90 bp GGGGCCACAGTGATCCAGGATACAGCCATGATGTTGGGGCATCTGCCAATTTCAGTGTTCACTGAATTGTaGGACAGGCTAAAGATCAAA +
Preference number: 2 (lower is better)
Translates to: GATVIQDTAMMLGHLPISVFTEL*DRLKIK
Trigger: TTTGATCTTTAGCCTGTCTCACAATTCAGTGAACAC...TGAAATTGGCAGATGCCCCAACATCATGGCTGTATCCTGGATCACTGTGGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
3UTR-3UTR GCA 90 bp ATGGAAACAGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGAGAGTGGGGTGTGGTTaGACAGCAGGAGGATTCCAT +
Preference number: 2 (lower is better)
Translates to: METAIPTSCIFLFLWCHQRVGCG*TAGGFH
Trigger: ATGGAATCCTCCTGCTGTGCAACCACACCCCACTCT...CTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCTGTTTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
3UTR-3UTR GCA 90 bp TACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTCCCAACTACATGGAATGTaGCAAGGAAAGAGGGCGCCA +
Preference number: 2 (lower is better)
Translates to: YNIKNHIAWATYLTSPLSQLHGM*QGKRAP
Trigger: TGGCGCCCTCTTTCCTTGGCACATTCCATGTAGTTG...GGAAAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
3UTR-3UTR CCA 90 bp CCCACATTGTCACTATGGAGATTGTGTCCATGGAAACAGCCATTCCAACATCTTTGGAGATTGTGTCCATaGAAACAGCCATTCCAACAT +
Preference number: 2 (lower is better)
Translates to: PTLSLWRLCPWKQPFQHLWRLCP*KQPFQH
Trigger: ATGTTGGAATGGCTGTTTCCATGGACACAATCTCCA...AAGATGTTGGAATGGCTGTTTCCATGGACACAATCTCCATAGTGACAATGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
3UTR-3UTR CCA 90 bp CAATACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTACTCTACATACTTGGTaGGGCCACAGTGATCCAGGA +
Preference number: 2 (lower is better)
Translates to: QYNIKNHIAWATYLTSPLTLHTW*GHSDPG
Trigger: TCCTGGATCACTGTGGCCCCACCAAGTATGTAGAGT...AAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
3UTR-3UTR GCA 90 bp CAATACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTTCTCTCCTAGACTCTaGTTGTTTCAGCAGCAGAGG +
Preference number: 2 (lower is better)
Translates to: QYNIKNHIAWATYLTSPLFSPRL*LFQQQR
Trigger: CCTCTGCTGCTGAAACAAGCAGAGTCTAGGAGAGAA...AAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
3UTR GCA 72 bp CCCACATGGCTCACGCCACAGTTCTCTCCTAGACTCTaGTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGG +
Preference number: 3 (lower is better)
Translates to: PTWLTPQFSPRL*LFQQQRPGPPW
Trigger: CCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAGGAGAGAACTGTGGCGTGAGCCATGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
3UTR GCA 72 bp AGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATaGTGTGGGTCCCCACAAGGGTACCAACTACATGGA +
Preference number: 3 (lower is better)
Translates to: SSRGLGLHGFHG*CGSPQGYQLHG
Trigger: TCCATGTAGTTGGTACCCTTGTGGGGACCCACAGCATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
3UTR CCA 72 bp CTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATaGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTA +
Preference number: 3 (lower is better)
Translates to: LCLFQQQRPGPP*FPWMLWVPTRV
Trigger: TACCCTTGTGGGGACCCACAGCATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
3UTR CCA 72 bp CAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCTGTaGGTCCCCACAAGGGTACCAACTACATGGAATGTG +
Preference number: 3 (lower is better)
Translates to: QRPGPPWFPWML*VPTRVPTTWNV
Trigger: CACATTCCATGTAGTTGGTACCCTTGTGGGGACCCACAGCATCCATGGAAACCATGGAGGCCCAGGCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
3UTR CCA 72 bp TGGATGCTGTGGGTCCCCACAAGGGTACCAACTACATaGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAG +
Preference number: 3 (lower is better)
Translates to: WMLWVPTRVPTT*NVPRKEGARDK
Trigger: CTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCATGTAGTTGGTACCCTTGTGGGGACCCACAGCATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
3UTR-3UTR CAA 90 bp TCACGCCACAGTTCTCTCCTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCTTGTCACTATGGAGATaGTGTCCATGGAAACAGCCA +
Preference number: 3 (lower is better)
Translates to: SRHSSLLDSACFSSRGLGLSLWR*CPWKQP
Trigger: TGGCTGTTTCCATGGACACAATCTCCATAGTGACAA...GCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAGGAGAGAACTGTGGCGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
3UTR-3UTR CAA 90 bp TCACGCCACAGTTCTCTCCTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCAAGGGTGGTTGTCATTaGTCTACTCTTTCAGTCCAG +
Preference number: 3 (lower is better)
Translates to: SRHSSLLDSACFSSRGLGKGGCH*STLSVQ
Trigger: CTGGACTGAAAGAGTAGACAAATGACAACCACCCTT...GCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAGGAGAGAACTGTGGCGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
3UTR-3UTR CAA 90 bp CCTGGGCCTCCATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTACCAACTAGCCATTCCAACATCTaGTATCTTTCTTTTCCTGTG +
Preference number: 3 (lower is better)
Translates to: PGPPWFPWMLWVPTRVPTSHSNI*YLSFPV
Trigger: CACAGGAAAAGAAAGATACAAGATGTTGGAATGGCT...AGTTGGTACCCTTGTGGGGACCCACAGCATCCATGGAAACCATGGAGGCCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
3UTR-3UTR CAA 90 bp TGGAAACAGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTCAGAGTGGGGTGTGGTaGCACAGCAGGAGGATTCCA +
Preference number: 3 (lower is better)
Translates to: WKQPFQHLVSFFSCGVTSQSGVW*HSRRIP
Trigger: TGGAATCCTCCTGCTGTGCAACCACACCCCACTCTG...ACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCTGTTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
3UTR-3UTR CAA 90 bp CAAGGGTACCAACTACATGGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAGCTTGTCACTATGGAGATaGTGTCCATGGAAACAGCCA +
Preference number: 3 (lower is better)
Translates to: QGYQLHGMCQGKRAPEISLSLWR*CPWKQP
Trigger: TGGCTGTTTCCATGGACACAATCTCCATAGTGACAA...GCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCATGTAGTTGGTACCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
3UTR-3UTR CAA 90 bp ATGGAAACAGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGCAGTCTCACCTGTGCTaGCTGTCCATTCCCACGTGC +
Preference number: 3 (lower is better)
Translates to: METAIPTSCIFLFLWCHQQSHLC*LSIPTC
Trigger: GCACGTGGGAATGGACAGCAAGCACAGGTGAGACTG...CTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCTGTTTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109510.10
3UTR TCA 72 bp TTTGTCTACTCTTTCAGTCCAGGGTCTAGTGTTCACTaGATTGTGAGACAGGCTAAAGATCAAAGCCACACC +
Preference number: 3 (lower is better)
Translates to: FVYSFSPGSSVH*IVRQAKDQSHT
Trigger: GGTGTGGCTTTGATCTTTAGCCTGTCTCACAATTCAGTGAACACTAGACCCTGGACTGAAAGAGTAGACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
3UTR-3UTR CAA 90 bp TGTGAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCAAGCCATTCCAACATCTaGTATCTTTCTTTTCCTGTG +
Preference number: 3 (lower is better)
Translates to: CETDSNQGKGGCHLSTLSSHSNI*YLSFPV
Trigger: CACAGGAAAAGAAAGATACAAGATGTTGGAATGGCT...TGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
3UTR TCA 72 bp GACAGGCTAAAGATCAAAGCCACACCCCATCCTTTATaGGATGAGTTTGTTCAGTTCAATTTCACATTTAAA +
Preference number: 3 (lower is better)
Translates to: DRLKIKATPHPL*DEFVQFNFTFK
Trigger: TTTAAATGTGAAATTGAACTGAACAAACTCATCTCATAAAGGATGGGGTGTGGCTTTGATCTTTAGCCTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp GCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTAGGAGCTGTGCTGCTTaGCTTCCTTTCCCATGGTCC +
Preference number: 4 (lower is better)
Translates to: AEAWASMVSMDAVGPHKGRSCAA*LPFPWS
Trigger: GGACCATGGGAAAGGAAGTCAAGCAGCACAGCTCCT...ACCCTTGTGGGGACCCACAGCATCCATGGAAACCATGGAGGCCCAGGCCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp GACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCGCAGCGATCACTCCCTaGGCAGAACTGCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: DSACFSSRGLGLHGFHGCAAITP*AELLAQ
Trigger: CTGGGCCAGCAGTTCTGCTCAGGGAGTGATCGCTGC...GCATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp CAGGGCAGAGTGGGGTGTGGTTGCACAGCAGGAGGATTCCATTCCGTCACGTGTCGGACTGCTCTGTGCTaGGGCTGCCTTTTGCGGTCT +
Preference number: 4 (lower is better)
Translates to: QGRVGCGCTAGGFHSVTCRTALC*GCLLRS
Trigger: AGACCGCAAAAGGCAGCCTCAGCACAGAGCAGTCCG...ACACGTGACGGAATGGAATCCTCCTGCTGTGCAACCACACCCCACTCTGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp CTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGACACCCCCGCTCGGACTaGTCTGTGCTGAGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: LDSACFSSRGLGLHGFHGHPRSD*SVLRLP
Trigger: AGGCAGCCTCAGCACAGAGCAGTCCGAGCGGGGGTG...TCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp CCTGGGCCTCCATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTACCAACTGGTTTTCCGCTTCCTTaGCTGGGCCCCAGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: PGPPWFPWMLWVPTRVPTGFPLP*LGPRLP
Trigger: AGGAAGCCTGGGGCCCAGCCAAGGAAGCGGAAAACC...AGTTGGTACCCTTGTGGGGACCCACAGCATCCATGGAAACCATGGAGGCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp TCACGCCACAGTTCTCTCCTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCGCTCAGTCCTGCCTGTaGAACTTGGGCCTACTGCGG +
Preference number: 4 (lower is better)
Translates to: SRHSSLLDSACFSSRGLGAQSCL*NLGLLR
Trigger: CCGCAGTAGGCCCAAGTTTCACAGGCAGGACTGAGC...GCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAGGAGAGAACTGTGGCGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp GCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTAGAGGCCAGGCTTTCTaGGTTGGGAGAAAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: AEAWASMVSMDAVGPHKGRGQAF*VGRKRS
Trigger: GCTCCTTTTTCTCCCAACTCAGAAAGCCTGGCCTCT...ACCCTTGTGGGGACCCACAGCATCCATGGAAACCATGGAGGCCCAGGCCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp GCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTCATGTGCCTCTGTCTTaGCTTTGTCATCCCCACTGC +
Preference number: 4 (lower is better)
Translates to: AEAWASMVSMDAVGPHKGHVPLS*LCHPHC
Trigger: GCAGTGGGGATGACAAAGTCAAGACAGAGGCACATG...ACCCTTGTGGGGACCCACAGCATCCATGGAAACCATGGAGGCCCAGGCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp TCACGCCACAGTTCTCTCCTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCCTTCCTGCCTATGCTaGGCAGCAGCGATCACTCCC +
Preference number: 4 (lower is better)
Translates to: SRHSSLLDSACFSSRGLGPSCLC*AAAITP
Trigger: GGGAGTGATCGCTGCTGCGCAGCATAGGCAGGAAGG...GCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAGGAGAGAACTGTGGCGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp GCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTCTGACTGAAACGCTGTaGAGAAGGGAAGGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: AEAWASMVSMDAVGPHKGLTETL*RREGGG
Trigger: TCCTCCTCCTTCCCTTCTCCACAGCGTTTCAGTCAG...ACCCTTGTGGGGACCCACAGCATCCATGGAAACCATGGAGGCCCAGGCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp GCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTTACTGCATCACATGCTaGGGAGGATGTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: AEAWASMVSMDAVGPHKGYCITC*GGCCCC
Trigger: GCAGCAGCAACATCCTCCCCAGCATGTGATGCAGTA...ACCCTTGTGGGGACCCACAGCATCCATGGAAACCATGGAGGCCCAGGCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp GCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTGGACCTCTTAGGAGGTaGATTCTTCGGAAGAGTGGC +
Preference number: 4 (lower is better)
Translates to: AEAWASMVSMDAVGPHKGGPLRR*ILRKSG
Trigger: GCCACTCTTCCGAAGAATCCACCTCCTAAGAGGTCC...ACCCTTGTGGGGACCCACAGCATCCATGGAAACCATGGAGGCCCAGGCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp GGGGCCACAGTGATCCAGGATACAGCCATGATGTTGGGGCATCTGCCAATTTCACCAGAAGGCCTTCGCTaGGGAGGCTGTGGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: GATVIQDTAMMLGHLPISPEGLR*GGCGVP
Trigger: AGGAACCCCACAGCCTCCTCAGCGAAGGCCTTCTGG...TGAAATTGGCAGATGCCCCAACATCATGGCTGTATCCTGGATCACTGTGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp GACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCTGCGGCTGCTGTTGCTaGGGTTGTGGTTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: DSACFSSRGLGLHGFHGCCGCCC*GCGCCC
Trigger: ACAGCAGCAACCACAACCTCAGCAACAGCAGCCGCA...GCATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp TCACGCCACAGTTCTCTCCTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCAGGCCCACCTTCTaGAGTGGTAGGTACAGAGGG +
Preference number: 4 (lower is better)
Translates to: SRHSSLLDSACFSSRGLGLRPTF*SGRYRG
Trigger: CCCTCTGTACCTACCACTTCAGAAGGTGGGCCTGAG...GCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAGGAGAGAACTGTGGCGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp GACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCTGCTGTTGCTGCTGCTaGCCCTGCTGGTTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: DSACFSSRGLGLHGFHGCCCCCC*PCWFPG
Trigger: ACCAGGAAACCAGCAGGGGCAGCAGCAGCAACAGCA...GCATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp TCACGCCACAGTTCTCTCCTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCTGCTGGGGAGGATGTTaGTGCTGCTGCTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: SRHSSLLDSACFSSRGLGCWGGC*CCCCCC
Trigger: GCAACAGCAGCAGCAGCAGCAACATCCTCCCCAGCA...GCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAGGAGAGAACTGTGGCGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp GACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCAAGCTGGGAGCACCTTaGTTTCTGTGCTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: DSACFSSRGLGLHGFHGCKLGAP*FLCCWG
Trigger: CCCCCAGCAGCACAGAAAGCAAGGTGCTCCCAGCTT...GCATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp GGGGCCACAGTGATCCAGGATACAGCCATGATGTTGGGGCATCTGCCAATTTCAGGAAGGGGAGGCTTGTaGTTGGGGCACCTCACCGAG +
Preference number: 4 (lower is better)
Translates to: GATVIQDTAMMLGHLPISGRGGL*LGHLTE
Trigger: CTCGGTGAGGTGCCCCAAGCACAAGCCTCCCCTTCC...TGAAATTGGCAGATGCCCCAACATCATGGCTGTATCCTGGATCACTGTGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp AGAGTGGGGTGTGGTTGCACAGCAGGAGGATTCCATTCCGTCACGTGTGTCCTCGCTGTGCACCTCCTGTaGGTAGCTCTGCTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: RVGCGCTAGGFHSVTCVLAVHLL*VALLVS
Trigger: GGAAACCAGCAGAGCTACCCACAGGAGGTGCACAGC...GAGGACACACGTGACGGAATGGAATCCTCCTGCTGTGCAACCACACCCCACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp CAGGGCAGAGTGGGGTGTGGTTGCACAGCAGGAGGATTCCATTCCGTCACGTGTGCTCCCCCAAAATTCTaGAACATCTGGGCCTGGCGA +
Preference number: 4 (lower is better)
Translates to: QGRVGCGCTAGGFHSVTCAPPKF*NIWAWR
Trigger: TCGCCAGGCCCAGATGTTCCAGAATTTTGGGGGAGC...ACACGTGACGGAATGGAATCCTCCTGCTGTGCAACCACACCCCACTCTGCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp CAGGGCAGAGTGGGGTGTGGTTGCACAGCAGGAGGATTCCATTCCGTCACGTGTGCCACTATTGCTAGGTaGTCTCTGACTGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: QGRVGCGCTAGGFHSVTCATIAR*SLTGSR
Trigger: CCTGCTGCCAGTCAGAGACCACCTAGCAATAGTGGC...ACACGTGACGGAATGGAATCCTCCTGCTGTGCAACCACACCCCACTCTGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp AGAGTGGGGTGTGGTTGCACAGCAGGAGGATTCCATTCCGTCACGTGTGTCCTCAAACTGCTGCTGCCTTaGGCTCTTGCGTGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: RVGCGCTAGGFHSVTCVLKLLLP*ALAWAF
Trigger: GAAGGCCCACGCAAGAGCCCAAGGCAGCAGCAGTTT...GAGGACACACGTGACGGAATGGAATCCTCCTGCTGTGCAACCACACCCCACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp GCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTCCTTCTTTTGATGGGTaGAGGAGGCGCCCTTTATCA +
Preference number: 4 (lower is better)
Translates to: AEAWASMVSMDAVGPHKGPSFDG*RRRPLS
Trigger: TGATAAAGGGCGCCTCCTCCACCCATCAAAAGAAGG...ACCCTTGTGGGGACCCACAGCATCCATGGAAACCATGGAGGCCCAGGCCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp CCTGGGCCTCCATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTACCAACTATCTGCAGAACCTTCTaGCATCTGAGGGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: PGPPWFPWMLWVPTRVPTICRTF*HLRGLR
Trigger: CCTCAGCCCCCTCAGATGCCAGAAGGTTCTGCAGAT...AGTTGGTACCCTTGTGGGGACCCACAGCATCCATGGAAACCATGGAGGCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp CCTGGGCCTCCATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTACCAACTCCAGCCTCCTGGCAGTaGGAGCATTTCATCTCTCTG +
Preference number: 4 (lower is better)
Translates to: PGPPWFPWMLWVPTRVPTPASWQ*EHFISL
Trigger: CAGAGAGATGAAATGCTCCCACTGCCAGGAGGCTGG...AGTTGGTACCCTTGTGGGGACCCACAGCATCCATGGAAACCATGGAGGCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp GCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTCTCCAGCTTCTTTCCTaGAACCCTGATAGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: AEAWASMVSMDAVGPHKGLQLLS*NPDSLD
Trigger: ATCAAGGCTATCAGGGTTTCAGGAAAGAAGCTGGAG...ACCCTTGTGGGGACCCACAGCATCCATGGAAACCATGGAGGCCCAGGCCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp GATCCAGGATACAGCCATGATGTTGGGGCATCTGCCAATTTCACCACTACCACCCCAGAAGGCCTTCGCTaGGGAGGCTGTGGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: DPGYSHDVGASANFTTTTPEGLR*GGCGVP
Trigger: AGGAACCCCACAGCCTCCTCAGCGAAGGCCTTCTGG...GGTGGTAGTGGTGAAATTGGCAGATGCCCCAACATCATGGCTGTATCCTGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp TCACGCCACAGTTCTCTCCTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCAGAAGATGGCAGAGTTaGGGGCCGCTGCATTGGTTG +
Preference number: 4 (lower is better)
Translates to: SRHSSLLDSACFSSRGLGRRWQS*GPLHWL
Trigger: CAACCAATGCAGCGGCCCTCAACTCTGCCATCTTCT...GCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAGGAGAGAACTGTGGCGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp CAGGGCAGAGTGGGGTGTGGTTGCACAGCAGGAGGATTCCATTCCGTCACGTGTGCAACCTCCATCCAATaGCTCAGCCATAGGGGACTT +
Preference number: 4 (lower is better)
Translates to: QGRVGCGCTAGGFHSVTCATSIQ*LSHRGL
Trigger: AAGTCCCCTATGGCTGAGTCATTGGATGGAGGTTGC...ACACGTGACGGAATGGAATCCTCCTGCTGTGCAACCACACCCCACTCTGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp TGGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAGCCATTCCTTGGGTACACCGCTCAGTCCTGCCTGTaGAACTTGGGCCTACTGCGG +
Preference number: 4 (lower is better)
Translates to: WNVPRKEGARDKPFLGYTAQSCL*NLGLLR
Trigger: CCGCAGTAGGCCCAAGTTTCACAGGCAGGACTGAGC...GGTGTACCCAAGGAATGGCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp TGGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAGCCATTCCTTGGGTACACCACCCATGTGTCCCAATaGGTGAGCCCCTGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: WNVPRKEGARDKPFLGYTTHVSQ*VSPWVP
Trigger: AGGGACCCAGGGGCTCACTCATTGGGACACATGGGT...GGTGTACCCAAGGAATGGCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp AGAGTGGGGTGTGGTTGCACAGCAGGAGGATTCCATTCCGTCACGTGTGTCCTCTCCATCTCAGCCTCTTaGGTAGCCACAGTGCCACCT +
Preference number: 4 (lower is better)
Translates to: RVGCGCTAGGFHSVTCVLSISAS*VATVPP
Trigger: AGGTGGCACTGTGGCTACTCAAGAGGCTGAGATGGA...GAGGACACACGTGACGGAATGGAATCCTCCTGCTGTGCAACCACACCCCACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp CCTGGGCCTCCATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTACCAACTCATGTGCCTCTGTCTTaGCTTTGTCATCCCCACTGC +
Preference number: 4 (lower is better)
Translates to: PGPPWFPWMLWVPTRVPTHVPLS*LCHPHC
Trigger: GCAGTGGGGATGACAAAGTCAAGACAGAGGCACATG...AGTTGGTACCCTTGTGGGGACCCACAGCATCCATGGAAACCATGGAGGCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp CAGGGCAGAGTGGGGTGTGGTTGCACAGCAGGAGGATTCCATTCCGTCACGTGTCTGCAGCATAAAGGATaGAGCTGGGAGCACCTTGCT +
Preference number: 4 (lower is better)
Translates to: QGRVGCGCTAGGFHSVTCLQHKG*SWEHLA
Trigger: AGCAAGGTGCTCCCAGCTTCATCCTTTATGCTGCAG...ACACGTGACGGAATGGAATCCTCCTGCTGTGCAACCACACCCCACTCTGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp GGGGCCACAGTGATCCAGGATACAGCCATGATGTTGGGGCATCTGCCAATTTCACGCTTGAACCTAGGATaGGCAGCCAGGCTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: GATVIQDTAMMLGHLPISRLNLG*AARLLC
Trigger: GCAGAGGAGCCTGGCTGCTCATCCTAGGTTCAAGCG...TGAAATTGGCAGATGCCCCAACATCATGGCTGTATCCTGGATCACTGTGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp TGGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAGCCATTCCTTGGGTACACCCGCTTGAACCTAGGATaGGCAGCCAGGCTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: WNVPRKEGARDKPFLGYTRLNLG*AARLLC
Trigger: GCAGAGGAGCCTGGCTGCTCATCCTAGGTTCAAGCG...GGTGTACCCAAGGAATGGCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp GGAGGATTCCATTCCGTCACGTGTGTCCTCCACCTTCTCATCTCCACAGTCTCATCCACCACAGTCTTCTaGGCGGTGGCGCCGCTTGAA +
Preference number: 4 (lower is better)
Translates to: GGFHSVTCVLHLLISTVSSTTVF*AVAPLE
Trigger: TTCAAGCGGCGCCACCGCTCAGAAGACTGTGGTGGA...TGAGACTGTGGAGATGAGAAGGTGGAGGACACACGTGACGGAATGGAATCCTCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp GACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCCACTCGCATACTGATTaGCAAAGCTGCTCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: DSACFSSRGLGLHGFHGCHSHTD*QSCSPG
Trigger: CCCAGGGGAGCAGCTTTGGCAATCAGTATGCGAGTG...GCATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp AGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGTGCTGCTGCTGCCCCTaGTGGTTTCCTGGTGGAATC +
Preference number: 4 (lower is better)
Translates to: RLCLFQQQRPGPPWFPWMCCCCP*WFPGGI
Trigger: GATTCCACCAGGAAACCAGCAGGGGCAGCAGCAGCA...CATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp CAGGGCAGAGTGGGGTGTGGTTGCACAGCAGGAGGATTCCATTCCGTCACGTGTCTTTGGCTCCCCATCTaGAGAACCTTCTGGCATCTG +
Preference number: 4 (lower is better)
Translates to: QGRVGCGCTAGGFHSVTCLWLPI*RTFWHL
Trigger: CAGATGCCAGAAGGTTCTGCAGATGGGGAGCCAAAG...ACACGTGACGGAATGGAATCCTCCTGCTGTGCAACCACACCCCACTCTGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp TCACGCCACAGTTCTCTCCTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCGCTGAGGCTGCCTTTTaGGGTCTTGTTCTGCAAGGG +
Preference number: 4 (lower is better)
Translates to: SRHSSLLDSACFSSRGLGAEAAF*GLVLQG
Trigger: CCCTTGCAGAACAAGACCGCAAAAGGCAGCCTCAGC...GCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAGGAGAGAACTGTGGCGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp AGAGTGGGGTGTGGTTGCACAGCAGGAGGATTCCATTCCGTCACGTGTGTCCTCATCTGCAGAACCTTCTaGCATCTGAGGGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: RVGCGCTAGGFHSVTCVLICRTF*HLRGLR
Trigger: CCTCAGCCCCCTCAGATGCCAGAAGGTTCTGCAGAT...GAGGACACACGTGACGGAATGGAATCCTCCTGCTGTGCAACCACACCCCACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp GCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTCCAGGTAGATTCCATTaGCCCAGAGAATACAACCCT +
Preference number: 4 (lower is better)
Translates to: AEAWASMVSMDAVGPHKGPGRFH*PREYNP
Trigger: AGGGTTGTATTCTCTGGGCCAATGGAATCTACCTGG...ACCCTTGTGGGGACCCACAGCATCCATGGAAACCATGGAGGCCCAGGCCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp GCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTTTTTGTGCCGAACCTTaGCTTTGCTCTGCATTTCTG +
Preference number: 4 (lower is better)
Translates to: AEAWASMVSMDAVGPHKGFCAEP*LCSAFL
Trigger: CAGAAATGCAGAGCAAAGTCAAGGTTCGGCACAAAA...ACCCTTGTGGGGACCCACAGCATCCATGGAAACCATGGAGGCCCAGGCCTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp TCACGCCACAGTTCTCTCCTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCAGGCTGTGGGGTTCCTaGTGCCACTGTGTCTTTGTT +
Preference number: 4 (lower is better)
Translates to: SRHSSLLDSACFSSRGLGRLWGS*CHCVFV
Trigger: AACAAAGACACAGTGGCAGCAGGAACCCCACAGCCT...GCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAGGAGAGAACTGTGGCGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp CTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGAACTGATTGCCAAAGCTaGTCCCCTGGGGAGGTCCAT +
Preference number: 4 (lower is better)
Translates to: LDSACFSSRGLGLHGFHGTDCQS*SPGEVH
Trigger: ATGGACCTCCCCAGGGGAGCAGCTTTGGCAATCAGT...TCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp GGAGGATTCCATTCCGTCACGTGTGTCCTCCACCTTCTCATCTCCACAGTCTCATGCTGTTGCTGCTGCTaGCCCTGCTGGTTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: GGFHSVTCVLHLLISTVSCCCCC*PCWFPG
Trigger: ACCAGGAAACCAGCAGGGGCAGCAGCAGCAACAGCA...TGAGACTGTGGAGATGAGAAGGTGGAGGACACACGTGACGGAATGGAATCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp AGAGTGGGGTGTGGTTGCACAGCAGGAGGATTCCATTCCGTCACGTGTGTCCTCTCAGGCTGGTTGTACTaGCCAACCTGGCTTTGCAGA +
Preference number: 4 (lower is better)
Translates to: RVGCGCTAGGFHSVTCVLSGWLY*PTWLCR
Trigger: TCTGCAAAGCCAGGTTGGGCAGTACAACCAGCCTGA...GAGGACACACGTGACGGAATGGAATCCTCCTGCTGTGCAACCACACCCCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp GACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCTGCTGCTCCAGGACTTaGATTGCCACGGTAAGTCTC +
Preference number: 4 (lower is better)
Translates to: DSACFSSRGLGLHGFHGCCCSRT*IATVSL
Trigger: GAGACTTACCGTGGCAATGCAAGTCCTGGAGCAGCA...GCATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp AGAGTGGGGTGTGGTTGCACAGCAGGAGGATTCCATTCCGTCACGTGTGTCCTCTGCTGCTCCAGGACTTaGATTGCCACGGTAAGTCTC +
Preference number: 4 (lower is better)
Translates to: RVGCGCTAGGFHSVTCVLCCSRT*IATVSL
Trigger: GAGACTTACCGTGGCAATGCAAGTCCTGGAGCAGCA...GAGGACACACGTGACGGAATGGAATCCTCCTGCTGTGCAACCACACCCCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp CAAGGGTACCAACTACATGGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAGCGCTGCCTTGGGCTCTTaGGTGGGCCTTCCTGCCTAT +
Preference number: 4 (lower is better)
Translates to: QGYQLHGMCQGKRAPEISAALGS*VGLPAY
Trigger: ATAGGCAGGAAGGCCCACGCAAGAGCCCAAGGCAGC...GCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCATGTAGTTGGTACCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp AGAGTGGGGTGTGGTTGCACAGCAGGAGGATTCCATTCCGTCACGTGTGTCCTCCTTTGTCATCCCCACTaGCACGCCACTCTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: RVGCGCTAGGFHSVTCVLLCHPH*HATLQK
Trigger: CTTCTGAAGAGTGGCGTGGCAGTGGGGATGACAAAG...GAGGACACACGTGACGGAATGGAATCCTCCTGCTGTGCAACCACACCCCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp ATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTACCAACTACATGGAATGTGCAGCCAGGCTCCTCTaGTCCTTCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: MVSMDAVGPHKGTNYMECAARLL*SFCCCC
Trigger: GCAGCAGCAGCAGAAGGAGCAGAGGAGCCTGGCTGC...ACATTCCATGTAGTTGGTACCCTTGTGGGGACCCACAGCATCCATGGAAACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp CCTGGGCCTCCATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTACCAACTCAGTCTTTTCACTGCTaGCCTCCGTGGCTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: PGPPWFPWMLWVPTRVPTQSFHC*PPWLLF
Trigger: AAAAAGCAGCCACGGAGGGCAGCAGTGAAAAGACTG...AGTTGGTACCCTTGTGGGGACCCACAGCATCCATGGAAACCATGGAGGCCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp GCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTGGACCCAAAATTCGTTaGTGTCAAGAGGTAGTTCAG +
Preference number: 4 (lower is better)
Translates to: AEAWASMVSMDAVGPHKGGPKIR*CQEVVQ
Trigger: CTGAACTACCTCTTGACAGCAACGAATTTTGGGTCC...ACCCTTGTGGGGACCCACAGCATCCATGGAAACCATGGAGGCCCAGGCCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp GGGGCCACAGTGATCCAGGATACAGCCATGATGTTGGGGCATCTGCCAATTTCAGCTGTGCACCTCCTGTaGGTAGCTCTGCTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: GATVIQDTAMMLGHLPISAVHLL*VALLVS
Trigger: GGAAACCAGCAGAGCTACCCACAGGAGGTGCACAGC...TGAAATTGGCAGATGCCCCAACATCATGGCTGTATCCTGGATCACTGTGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp AGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGTGGAACATCTGGGCCTaGCGAGGGCTGAACTCTTCT +
Preference number: 4 (lower is better)
Translates to: RLCLFQQQRPGPPWFPWMWNIWA*RGLNSS
Trigger: AGAAGAGTTCAGCCCTCGCCAGGCCCAGATGTTCCA...CATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp AGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGAGGCTGGCTGTCCAGTaGTTTGTGGCAGAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: RLCLFQQQRPGPPWFPWMRLAVQ*FVAEAD
Trigger: ATCAGCCTCTGCCACAAACCACTGGACAGCCAGCCT...CATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp CAGGGCAGAGTGGGGTGTGGTTGCACAGCAGGAGGATTCCATTCCGTCACGTGTGGGCTGAAATTCTGGTaGAACTGCATGGGAGACCTT +
Preference number: 4 (lower is better)
Translates to: QGRVGCGCTAGGFHSVTCGLKFW*NCMGDL
Trigger: AAGGTCTCCCATGCAGTTCCACCAGAATTTCAGCCC...ACACGTGACGGAATGGAATCCTCCTGCTGTGCAACCACACCCCACTCTGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp GACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCTTGCCTTGCCCACACTaGAGATTCTCACCACTCTGC +
Preference number: 4 (lower is better)
Translates to: DSACFSSRGLGLHGFHGCLPCPH*RFSPLC
Trigger: GCAGAGTGGTGAGAATCTCCAGTGTGGGCAAGGCAA...GCATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp CTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATTTGCTCCCTCCTCCTaGAGGATCTGGCTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: LDSACFSSRGLGLHGFHGFAPSS*RIWLWK
Trigger: CTTCCACAGCCAGATCCTCCAGGAGGAGGGAGCAAA...TCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp CTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGAGAGCCTCCAGGCTCATaGGCTGATGATGGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: LDSACFSSRGLGLHGFHGEPPGS*ADDGGS
Trigger: AGAACCTCCATCATCAGCCCATGAGCCTGGAGGCTC...TCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp AGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGGAGCCTCCAGGCTCATaGGCTGATGATGGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: RLCLFQQQRPGPPWFPWMEPPGS*ADDGGS
Trigger: AGAACCTCCATCATCAGCCCATGAGCCTGGAGGCTC...CATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp TGGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAGCCATTCCTTGGGTACACCAGGGACCCGCCGCATTaGTGTGGACCTGCTATCTTG +
Preference number: 4 (lower is better)
Translates to: WNVPRKEGARDKPFLGYTRDPPH*CGPAIL
Trigger: CAAGATAGCAGGTCCACACCAATGCGGCGGGTCCCT...GGTGTACCCAAGGAATGGCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp CAGGGCAGAGTGGGGTGTGGTTGCACAGCAGGAGGATTCCATTCCGTCACGTGTACCACTGCTTTTGGCTaGAGAAGTCTGCCGAGAAAG +
Preference number: 4 (lower is better)
Translates to: QGRVGCGCTAGGFHSVTCTTAFG*RSLPRK
Trigger: CTTTCTCGGCAGACTTCTCCAGCCAAAAGCAGTGGT...ACACGTGACGGAATGGAATCCTCCTGCTGTGCAACCACACCCCACTCTGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp GCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTTTGATTAGACATTCCTaGAGGACCACTGCTTTTGGC +
Preference number: 4 (lower is better)
Translates to: AEAWASMVSMDAVGPHKGLIRHS*RTTAFG
Trigger: GCCAAAAGCAGTGGTCCTCCAGGAATGTCTAATCAA...ACCCTTGTGGGGACCCACAGCATCCATGGAAACCATGGAGGCCCAGGCCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp GACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCCTTTCTCTTCAGCCTTaGGATTTGCCTCAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: DSACFSSRGLGLHGFHGCLSLQP*DLPQGP
Trigger: TGGCCCCTGAGGCAAATCCCAAGGCTGAAGAGAAAG...GCATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp GACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCCCATGTTACGGTAACTaGCCCACTTGCCACAGAGAC +
Preference number: 4 (lower is better)
Translates to: DSACFSSRGLGLHGFHGCPCYGN*PTCHRD
Trigger: GTCTCTGTGGCAAGTGGGCCAGTTACCGTAACATGG...GCATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp GATCCAGGATACAGCCATGATGTTGGGGCATCTGCCAATTTCACCACTACCACCCTCTTCTATGCGGGATaGGCTGTGCACCTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: DPGYSHDVGASANFTTTTLFYAG*AVHLLW
Trigger: CCACAGGAGGTGCACAGCTCATCCCGCATAGAAGAG...GGTGGTAGTGGTGAAATTGGCAGATGCCCCAACATCATGGCTGTATCCTGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp CAAGGGTACCAACTACATGGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAGCCCCTCACTCGCATACTaGTTGCCAAAGCTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: QGYQLHGMCQGKRAPEISPSLAY*LPKLLP
Trigger: GGGGAGCAGCTTTGGCAATCAGTATGCGAGTGAGGG...GCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCATGTAGTTGGTACCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp CAGGGCAGAGTGGGGTGTGGTTGCACAGCAGGAGGATTCCATTCCGTCACGTGTCTCACCCTCTCACCTTaGTCTTCTGAACTACTAGAG +
Preference number: 4 (lower is better)
Translates to: QGRVGCGCTAGGFHSVTCLTLSP*SSELLE
Trigger: CTCTAGTAGTTCAGAAGATCAAGGTGAGAGGGTGAG...ACACGTGACGGAATGGAATCCTCCTGCTGTGCAACCACACCCCACTCTGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp CAGGGCAGAGTGGGGTGTGGTTGCACAGCAGGAGGATTCCATTCCGTCACGTGTATCTGGCTGTGGAAGTaGTGTGTGGCTGATTTCCTT +
Preference number: 4 (lower is better)
Translates to: QGRVGCGCTAGGFHSVTCIWLWK*CVADFL
Trigger: AAGGAAATCAGCCACACATCACTTCCACAGCCAGAT...ACACGTGACGGAATGGAATCCTCCTGCTGTGCAACCACACCCCACTCTGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp CAAGGGTACCAACTACATGGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAGCATGTGTCCCAATGAGTaGGCCCCTGGGTCCCTGACA +
Preference number: 4 (lower is better)
Translates to: QGYQLHGMCQGKRAPEISMCPNE*APGSLT
Trigger: TGTCAGGGACCCAGGGGCTCACTCATTGGGACACAT...GCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCATGTAGTTGGTACCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp ATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTACCAACTACATGGAATGTACCCATGTGTCCCAATaGGTGAGCCCCTGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: MVSMDAVGPHKGTNYMECTHVSQ*VSPWVP
Trigger: AGGGACCCAGGGGCTCACTCATTGGGACACATGGGT...ACATTCCATGTAGTTGGTACCCTTGTGGGGACCCACAGCATCCATGGAAACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp TGGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAGCCATTCCTTGGGTACACCGCAAAGTCATGGTACTaGGAAGAGGACCGACCCCTC +
Preference number: 4 (lower is better)
Translates to: WNVPRKEGARDKPFLGYTAKSWY*EEDRPL
Trigger: GAGGGGTCGGTCCTCTTCTCAGTACCATGACTTTGC...GGTGTACCCAAGGAATGGCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp TGGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAGCCATTCCTTGGGTACACCACTGATTGCCAAAGCTaGTCCCCTGGGGAGGTCCAT +
Preference number: 4 (lower is better)
Translates to: WNVPRKEGARDKPFLGYTTDCQS*SPGEVH
Trigger: ATGGACCTCCCCAGGGGAGCAGCTTTGGCAATCAGT...GGTGTACCCAAGGAATGGCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp GGAGGATTCCATTCCGTCACGTGTGTCCTCCACCTTCTCATCTCCACAGTCTCACACTCGCATACTGATTaGCAAAGCTGCTCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: GGFHSVTCVLHLLISTVSHSHTD*QSCSPG
Trigger: CCCAGGGGAGCAGCTTTGGCAATCAGTATGCGAGTG...TGAGACTGTGGAGATGAGAAGGTGGAGGACACACGTGACGGAATGGAATCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp GATCCAGGATACAGCCATGATGTTGGGGCATCTGCCAATTTCACCACTACCACCTGCTGCTGTTGCTGCTaGTGCCCCTGCTGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: DPGYSHDVGASANFTTTTCCCCC*CPCWFP
Trigger: AGGAAACCAGCAGGGGCAGCAGCAGCAACAGCAGCA...GGTGGTAGTGGTGAAATTGGCAGATGCCCCAACATCATGGCTGTATCCTGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp CAAGGGTACCAACTACATGGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAGCTGCTGGGGAGGATGTTaGTGCTGCTGCTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: QGYQLHGMCQGKRAPEISCWGGC*CCCCCC
Trigger: GCAACAGCAGCAGCAGCAGCAACATCCTCCCCAGCA...GCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCATGTAGTTGGTACCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp AGAGTGGGGTGTGGTTGCACAGCAGGAGGATTCCATTCCGTCACGTGTGTCCTCATGGGCACATTGCCTTaGCCACACTGGAGATTCTCA +
Preference number: 4 (lower is better)
Translates to: RVGCGCTAGGFHSVTCVLMGTLP*PHWRFS
Trigger: TGAGAATCTCCAGTGTGGGCAAGGCAATGTGCCCAT...GAGGACACACGTGACGGAATGGAATCCTCCTGCTGTGCAACCACACCCCACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp CAGGGCAGAGTGGGGTGTGGTTGCACAGCAGGAGGATTCCATTCCGTCACGTGTTCATTTCAGGAGCTGTaGTGCTTGACTTCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: QGRVGCGCTAGGFHSVTCSFQEL*CLTSFP
Trigger: GGGAAAGGAAGTCAAGCAGCACAGCTCCTGAAATGA...ACACGTGACGGAATGGAATCCTCCTGCTGTGCAACCACACCCCACTCTGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp GGAGGATTCCATTCCGTCACGTGTGTCCTCCACCTTCTCATCTCCACAGTCTCAGGAATCATGGGCTGCTaGTCCAGGACTTGCATTGCC +
Preference number: 4 (lower is better)
Translates to: GGFHSVTCVLHLLISTVSGIMGC*SRTCIA
Trigger: GGCAATGCAAGTCCTGGAGCAGCAGCCCATGATTCC...TGAGACTGTGGAGATGAGAAGGTGGAGGACACACGTGACGGAATGGAATCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp ATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTACCAACTACATGGAATGTGCTGCCTTGGGCTCTTaGGTGGGCCTTCCTGCCTAT +
Preference number: 4 (lower is better)
Translates to: MVSMDAVGPHKGTNYMECAALGS*VGLPAY
Trigger: ATAGGCAGGAAGGCCCACGCAAGAGCCCAAGGCAGC...ACATTCCATGTAGTTGGTACCCTTGTGGGGACCCACAGCATCCATGGAAACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp TGGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAGCCATTCCTTGGGTACACCTCAAGAAACTGCTGCTaGCTTGGGCTCTTGCGTGGG +
Preference number: 4 (lower is better)
Translates to: WNVPRKEGARDKPFLGYTSRNCC*LGLLRG
Trigger: CCCACGCAAGAGCCCAAGGCAGCAGCAGTTTCTTGA...GGTGTACCCAAGGAATGGCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp TCACGCCACAGTTCTCTCCTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCACTCTGTCAAGAAACTaGTGCTGCCTTGGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: SRHSSLLDSACFSSRGLGTLSRN*CCLGLL
Trigger: CAAGAGCCCAAGGCAGCAGCAGTTTCTTGACAGAGT...GCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAGGAGAGAACTGTGGCGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp CTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGACCTCAGGGGCCAATATaGCCACTGGAGCTACATTCT +
Preference number: 4 (lower is better)
Translates to: LDSACFSSRGLGLHGFHGPQGPI*PLELHS
Trigger: AGAATGTAGCTCCAGTGGGCATATTGGCCCCTGAGG...TCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp TCACGCCACAGTTCTCTCCTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCGTTACCACAGGCCCCTaGAGCATAAAGGATGAAGCT +
Preference number: 4 (lower is better)
Translates to: SRHSSLLDSACFSSRGLGVTTGP*SIKDEA
Trigger: AGCTTCATCCTTTATGCTGCAGGGGCCTGTGGTAAC...GCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAGGAGAGAACTGTGGCGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp GACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCGTTACCACAGGCCCCTaGAGCATAAAGGATGAAGCT +
Preference number: 4 (lower is better)
Translates to: DSACFSSRGLGLHGFHGCVTTGP*SIKDEA
Trigger: AGCTTCATCCTTTATGCTGCAGGGGCCTGTGGTAAC...GCATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp TGGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAGCCATTCCTTGGGTACACCGCAGGCCATAGAGCCTaGCACAGACCAGGTAGATTC +
Preference number: 4 (lower is better)
Translates to: WNVPRKEGARDKPFLGYTAGHRA*HRPGRF
Trigger: GAATCTACCTGGTCTGTGGCAGGCTCTATGGCCTGC...GGTGTACCCAAGGAATGGCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp TGGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAGCCATTCCTTGGGTACACCGCTCCCCCAAAATTCTaGAACATCTGGGCCTGGCGA +
Preference number: 4 (lower is better)
Translates to: WNVPRKEGARDKPFLGYTAPPKF*NIWAWR
Trigger: TCGCCAGGCCCAGATGTTCCAGAATTTTGGGGGAGC...GGTGTACCCAAGGAATGGCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp AGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGTTGCCTTGCCCACACTaGAGATTCTCACCACTCTGC +
Preference number: 4 (lower is better)
Translates to: RLCLFQQQRPGPPWFPWMLPCPH*RFSPLC
Trigger: GCAGAGTGGTGAGAATCTCCAGTGTGGGCAAGGCAA...CATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp AGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCTACCCGACCTGTCATaGCTTCTCGGGAGACAATCA +
Preference number: 4 (lower is better)
Translates to: RLCLFQQQRPGPPWFPWMLPDLS*LLGRQS
Trigger: TGATTGTCTCCCGAGAAGCCATGACAGGTCGGGTAG...CATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp CTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGACCCTTTCGCTCTCCATaGCTGCCAAAATCCCCCTTT +
Preference number: 4 (lower is better)
Translates to: LDSACFSSRGLGLHGFHGPFRSP*LPKSPF
Trigger: AAAGGGGGATTTTGGCAGCCATGGAGAGCGAAAGGG...TCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp CCTGGGCCTCCATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTACCAACTTTGATGCTGGTAGGATaGCAGTGGTCTCCAGATTTC +
Preference number: 4 (lower is better)
Translates to: PGPPWFPWMLWVPTRVPTLMLVG*QWSPDF
Trigger: GAAATCTGGAGACCACTGCCATCCTACCAGCATCAA...AGTTGGTACCCTTGTGGGGACCCACAGCATCCATGGAAACCATGGAGGCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp ATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTACCAACTACATGGAATGTGGTTTTCCGCTTCCTTaGCTGGGCCCCAGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: MVSMDAVGPHKGTNYMECGFPLP*LGPRLP
Trigger: AGGAAGCCTGGGGCCCAGCCAAGGAAGCGGAAAACC...ACATTCCATGTAGTTGGTACCCTTGTGGGGACCCACAGCATCCATGGAAACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp CTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGACCATGTTACGGTAACTaGCCCACTTGCCACAGAGAC +
Preference number: 4 (lower is better)
Translates to: LDSACFSSRGLGLHGFHGPCYGN*PTCHRD
Trigger: GTCTCTGTGGCAAGTGGGCCAGTTACCGTAACATGG...TCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp ATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTACCAACTACATGGAATGTCCCTCACTCGCATACTaGTTGCCAAAGCTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: MVSMDAVGPHKGTNYMECPSLAY*LPKLLP
Trigger: GGGGAGCAGCTTTGGCAATCAGTATGCGAGTGAGGG...ACATTCCATGTAGTTGGTACCCTTGTGGGGACCCACAGCATCCATGGAAACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp CTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATTTGTCCAGACTGACTaGAACGCTGTGGAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: LDSACFSSRGLGLHGFHGFVQTD*NAVEKG
Trigger: TCCCTTCTCCACAGCGTTTCAGTCAGTCTGGACAAA...TCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp CAAGGGTACCAACTACATGGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAGCTTGCTAGGTGGTCTCTaGCTGGCAGCAGGATCATCC +
Preference number: 4 (lower is better)
Translates to: QGYQLHGMCQGKRAPEISLLGGL*LAAGSS
Trigger: GGATGATCCTGCTGCCAGTCAGAGACCACCTAGCAA...GCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCATGTAGTTGGTACCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp AGAGTGGGGTGTGGTTGCACAGCAGGAGGATTCCATTCCGTCACGTGTGTCCTCATCTGGCTGTGGAAGTaGTGTGTGGCTGATTTCCTT +
Preference number: 4 (lower is better)
Translates to: RVGCGCTAGGFHSVTCVLIWLWK*CVADFL
Trigger: AAGGAAATCAGCCACACATCACTTCCACAGCCAGAT...GAGGACACACGTGACGGAATGGAATCCTCCTGCTGTGCAACCACACCCCACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp GGGGCCACAGTGATCCAGGATACAGCCATGATGTTGGGGCATCTGCCAATTTCACTGCAGCATAAAGGATaGAGCTGGGAGCACCTTGCT +
Preference number: 4 (lower is better)
Translates to: GATVIQDTAMMLGHLPISLQHKG*SWEHLA
Trigger: AGCAAGGTGCTCCCAGCTTCATCCTTTATGCTGCAG...TGAAATTGGCAGATGCCCCAACATCATGGCTGTATCCTGGATCACTGTGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp CAGGGCAGAGTGGGGTGTGGTTGCACAGCAGGAGGATTCCATTCCGTCACGTGTTTTTGTGCCGAACCTTaGCTTTGCTCTGCATTTCTG +
Preference number: 4 (lower is better)
Translates to: QGRVGCGCTAGGFHSVTCFCAEP*LCSAFL
Trigger: CAGAAATGCAGAGCAAAGTCAAGGTTCGGCACAAAA...ACACGTGACGGAATGGAATCCTCCTGCTGTGCAACCACACCCCACTCTGCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp AGAGTGGGGTGTGGTTGCACAGCAGGAGGATTCCATTCCGTCACGTGTGTCCTCACTACTACCACCACCTaGTCCCCCAAAATTCTGGAA +
Preference number: 4 (lower is better)
Translates to: RVGCGCTAGGFHSVTCVLTTTTT*SPKILE
Trigger: TTCCAGAATTTTGGGGGAGCAGGTGGTGGTAGTAGT...GAGGACACACGTGACGGAATGGAATCCTCCTGCTGTGCAACCACACCCCACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp GACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCAGCTGTTGTCTCAACTaGTGTACTTGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: DSACFSSRGLGLHGFHGCSCCLN*CTCCCC
Trigger: ACAGCAGCAGCAAGTACAGCAGTTGAGACAACAGCT...GCATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp GGGGCCACAGTGATCCAGGATACAGCCATGATGTTGGGGCATCTGCCAATTTCATCAGGCTGGTTGTACTaGCCAACCTGGCTTTGCAGA +
Preference number: 4 (lower is better)
Translates to: GATVIQDTAMMLGHLPISSGWLY*PTWLCR
Trigger: TCTGCAAAGCCAGGTTGGGCAGTACAACCAGCCTGA...TGAAATTGGCAGATGCCCCAACATCATGGCTGTATCCTGGATCACTGTGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp TCACGCCACAGTTCTCTCCTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCTCATTTCAGGAGCTGTaGTGCTTGACTTCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: SRHSSLLDSACFSSRGLGSFQEL*CLTSFP
Trigger: GGGAAAGGAAGTCAAGCAGCACAGCTCCTGAAATGA...GCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAGGAGAGAACTGTGGCGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp GGGGCCACAGTGATCCAGGATACAGCCATGATGTTGGGGCATCTGCCAATTTCACTGGGCCTCTGCTCCTaGCTGGAGACATCTTCAATT +
Preference number: 4 (lower is better)
Translates to: GATVIQDTAMMLGHLPISLGLCS*LETSSI
Trigger: AATTGAAGATGTCTCCAGGCAGGAGCAGAGGCCCAG...TGAAATTGGCAGATGCCCCAACATCATGGCTGTATCCTGGATCACTGTGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp GGGGCCACAGTGATCCAGGATACAGCCATGATGTTGGGGCATCTGCCAATTTCACTGTCAAGAAACTGCTaGTGCCTTGGGCTCTTGCGT +
Preference number: 4 (lower is better)
Translates to: GATVIQDTAMMLGHLPISLSRNC*CLGLLR
Trigger: ACGCAAGAGCCCAAGGCAGCAGCAGTTTCTTGACAG...TGAAATTGGCAGATGCCCCAACATCATGGCTGTATCCTGGATCACTGTGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp TGGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAGCCATTCCTTGGGTACACCCTTTGTCATCCCCACTaGCACGCCACTCTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: WNVPRKEGARDKPFLGYTLCHPH*HATLQK
Trigger: CTTCTGAAGAGTGGCGTGGCAGTGGGGATGACAAAG...GGTGTACCCAAGGAATGGCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp GGGGCCACAGTGATCCAGGATACAGCCATGATGTTGGGGCATCTGCCAATTTCATTCAGCCTTGGGATTTaGCTCAGGGGCCAATATGCC +
Preference number: 4 (lower is better)
Translates to: GATVIQDTAMMLGHLPISFSLGI*LRGQYA
Trigger: GGCATATTGGCCCCTGAGGCAAATCCCAAGGCTGAA...TGAAATTGGCAGATGCCCCAACATCATGGCTGTATCCTGGATCACTGTGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp GACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCGGTGGAGGTGGTTGCTaGTGCTGTTTCTTTTGCTTA +
Preference number: 4 (lower is better)
Translates to: DSACFSSRGLGLHGFHGCGGGGC*CCFFCL
Trigger: TAAGCAAAAGAAACAGCAGCAGCAACCACCTCCACC...GCATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp GGGGCCACAGTGATCCAGGATACAGCCATGATGTTGGGGCATCTGCCAATTTCACTTTGGCTCCCCATCTaGAGAACCTTCTGGCATCTG +
Preference number: 4 (lower is better)
Translates to: GATVIQDTAMMLGHLPISLWLPI*RTFWHL
Trigger: CAGATGCCAGAAGGTTCTGCAGATGGGGAGCCAAAG...TGAAATTGGCAGATGCCCCAACATCATGGCTGTATCCTGGATCACTGTGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp AGAGTGGGGTGTGGTTGCACAGCAGGAGGATTCCATTCCGTCACGTGTGTCCTCAGACAGCAAACCAGGTaGCCCATAACAGAAGACTCT +
Preference number: 4 (lower is better)
Translates to: RVGCGCTAGGFHSVTCVLRQQTR*PITEDS
Trigger: AGAGTCTTCTGTTATGGGGCACCTGGTTTGCTGTCT...GAGGACACACGTGACGGAATGGAATCCTCCTGCTGTGCAACCACACCCCACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp CAGGGCAGAGTGGGGTGTGGTTGCACAGCAGGAGGATTCCATTCCGTCACGTGTTTTGCAGAGGCATCTTaGTGGCAGCATTTGTGTACT +
Preference number: 4 (lower is better)
Translates to: QGRVGCGCTAGGFHSVTCFAEAS*WQHLCT
Trigger: AGTACACAAATGCTGCCACCAAGATGCCTCTGCAAA...ACACGTGACGGAATGGAATCCTCCTGCTGTGCAACCACACCCCACTCTGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp AGAGTGGGGTGTGGTTGCACAGCAGGAGGATTCCATTCCGTCACGTGTGTCCTCTGTAGAGCTACAGCTTaGAGACTGAACCACAGAAGC +
Preference number: 4 (lower is better)
Translates to: RVGCGCTAGGFHSVTCVLCRATA*RLNHRS
Trigger: GCTTCTGTGGTTCAGTCTCCAAGCTGTAGCTCTACA...GAGGACACACGTGACGGAATGGAATCCTCCTGCTGTGCAACCACACCCCACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp TCACGCCACAGTTCTCTCCTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCTGTAGAGCTACAGCTTaGAGACTGAACCACAGAAGC +
Preference number: 4 (lower is better)
Translates to: SRHSSLLDSACFSSRGLGCRATA*RLNHRS
Trigger: GCTTCTGTGGTTCAGTCTCCAAGCTGTAGCTCTACA...GCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAGGAGAGAACTGTGGCGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp GGGGCCACAGTGATCCAGGATACAGCCATGATGTTGGGGCATCTGCCAATTTCAGGTTTCTGGAACTCATaGGCACATTGCCTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: GATVIQDTAMMLGHLPISGFWNS*AHCLAH
Trigger: GTGGGCAAGGCAATGTGCCCATGAGTTCCAGAAACC...TGAAATTGGCAGATGCCCCAACATCATGGCTGTATCCTGGATCACTGTGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp CAGGGCAGAGTGGGGTGTGGTTGCACAGCAGGAGGATTCCATTCCGTCACGTGTGGAGTTGGACTGAGCTaGGGCATTAGCTGTAAAATT +
Preference number: 4 (lower is better)
Translates to: QGRVGCGCTAGGFHSVTCGVGLS*GISCKI
Trigger: AATTTTACAGCTAATGCCCCAGCTCAGTCCAACTCC...ACACGTGACGGAATGGAATCCTCCTGCTGTGCAACCACACCCCACTCTGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp GATCCAGGATACAGCCATGATGTTGGGGCATCTGCCAATTTCACCACTACCACCGCCACTATTGCTAGGTaGTCTCTGACTGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: DPGYSHDVGASANFTTTTATIAR*SLTGSR
Trigger: CCTGCTGCCAGTCAGAGACCACCTAGCAATAGTGGC...GGTGGTAGTGGTGAAATTGGCAGATGCCCCAACATCATGGCTGTATCCTGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp CAGGGCAGAGTGGGGTGTGGTTGCACAGCAGGAGGATTCCATTCCGTCACGTGTTGTGGAAGTGATGTGTaGCTGATTTCCTTTACGCCA +
Preference number: 4 (lower is better)
Translates to: QGRVGCGCTAGGFHSVTCCGSDV*LISFTP
Trigger: TGGCGTAAAGGAAATCAGCCACACATCACTTCCACA...ACACGTGACGGAATGGAATCCTCCTGCTGTGCAACCACACCCCACTCTGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp TCACGCCACAGTTCTCTCCTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCATTCCTCCCAATTCTaGCATCAGTACCCATGTGTC +
Preference number: 4 (lower is better)
Translates to: SRHSSLLDSACFSSRGLGHSSQF*HQYPCV
Trigger: GACACATGGGTACTGATGCCAGAATTGGGAGGAATG...GCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAGGAGAGAACTGTGGCGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp GACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCGCCTCTGCTCCTGCCTaGAGACATCTTCAATTTTTC +
Preference number: 4 (lower is better)
Translates to: DSACFSSRGLGLHGFHGCASAPA*RHLQFF
Trigger: GAAAAATTGAAGATGTCTCCAGGCAGGAGCAGAGGC...GCATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp CCTGGGCCTCCATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTACCAACTCCAGGCTTTCTGAGTTaGGAGAAAAAGGAGCATGTA +
Preference number: 4 (lower is better)
Translates to: PGPPWFPWMLWVPTRVPTPGFLS*EKKEHV
Trigger: TACATGCTCCTTTTTCTCCCAACTCAGAAAGCCTGG...AGTTGGTACCCTTGTGGGGACCCACAGCATCCATGGAAACCATGGAGGCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp CAGGGCAGAGTGGGGTGTGGTTGCACAGCAGGAGGATTCCATTCCGTCACGTGTTTGATTAGACATTCCTaGAGGACCACTGCTTTTGGC +
Preference number: 4 (lower is better)
Translates to: QGRVGCGCTAGGFHSVTCLIRHS*RTTAFG
Trigger: GCCAAAAGCAGTGGTCCTCCAGGAATGTCTAATCAA...ACACGTGACGGAATGGAATCCTCCTGCTGTGCAACCACACCCCACTCTGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp CAAGGGTACCAACTACATGGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAGCACCCAGGGAACCATCTaGTCTCCCTTGGTTACCACC +
Preference number: 4 (lower is better)
Translates to: QGYQLHGMCQGKRAPEISTQGTI*SPLVTT
Trigger: GGTGGTAACCAAGGGAGACCAGATGGTTCCCTGGGT...GCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCATGTAGTTGGTACCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp GGAGGATTCCATTCCGTCACGTGTGTCCTCCACCTTCTCATCTCCACAGTCTCACTTTCTCTTCAGCCTTaGGATTTGCCTCAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: GGFHSVTCVLHLLISTVSLSLQP*DLPQGP
Trigger: TGGCCCCTGAGGCAAATCCCAAGGCTGAAGAGAAAG...TGAGACTGTGGAGATGAGAAGGTGGAGGACACACGTGACGGAATGGAATCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp GCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTCTTGAGGTTCTACAATaGGAACTGCTTGTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: AEAWASMVSMDAVGPHKGLEVLQ*ELLVWF
Trigger: AAACCAAACAAGCAGTTCCCATTGTAGAACCTCAAG...ACCCTTGTGGGGACCCACAGCATCCATGGAAACCATGGAGGCCCAGGCCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp TCACGCCACAGTTCTCTCCTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCGACTTAAACTTGGGTTaGGACGTTCATTCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: SRHSSLLDSACFSSRGLGDLNLG*DVHSSQ
Trigger: TTGGGAGGAATGAACGTCTCAACCCAAGTTTAAGTC...GCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAGGAGAGAACTGTGGCGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp GAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCAGTCGCAGCGATCACTCCCTaGGCAGAACTGCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: ETDSNQGKGGCHLSTLSVAAITP*AELLAQ
Trigger: CTGGGCCAGCAGTTCTGCTCAGGGAGTGATCGCTGC...GACTGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp GGAGGATTCCATTCCGTCACGTGTGTCCTCCACCTTCTCATCTCCACAGTCTCAGGTTTCCGTGGTAACTaGTTTGCTCCCGAAACGACT +
Preference number: 4 (lower is better)
Translates to: GGFHSVTCVLHLLISTVSGFRGN*FAPETT
Trigger: AGTCGTTTCGGGAGCAAAGCAGTTACCACGGAAACC...TGAGACTGTGGAGATGAGAAGGTGGAGGACACACGTGACGGAATGGAATCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp AGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGAAGGGCAGAGTGCTGTaGTTGAAATTGGCTCACATG +
Preference number: 4 (lower is better)
Translates to: RLCLFQQQRPGPPWFPWMKGRVL*LKLAHM
Trigger: CATGTGAGCCAATTTCAAGCACAGCACTCTGCCCTT...CATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp GGGGCCACAGTGATCCAGGATACAGCCATGATGTTGGGGCATCTGCCAATTTCAAGAGTTGAGGGCCGCTaGATTGGTTGTAGATGCGAT +
Preference number: 4 (lower is better)
Translates to: GATVIQDTAMMLGHLPISRVEGR*IGCRCD
Trigger: ATCGCATCTACAACCAATGCAGCGGCCCTCAACTCT...TGAAATTGGCAGATGCCCCAACATCATGGCTGTATCCTGGATCACTGTGGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp TGGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAGCCATTCCTTGGGTACACCAACTCATGGGCACATTaGCTTGCCCACACTGGAGAT +
Preference number: 4 (lower is better)
Translates to: WNVPRKEGARDKPFLGYTNSWAH*LAHTGD
Trigger: ATCTCCAGTGTGGGCAAGGCAATGTGCCCATGAGTT...GGTGTACCCAAGGAATGGCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp GAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCAGTCCTCCCCCTGGGCCTCTaGTCCTGCCTGGAGACATCT +
Preference number: 4 (lower is better)
Translates to: ETDSNQGKGGCHLSTLSVLPLGL*SCLETS
Trigger: AGATGTCTCCAGGCAGGAGCAGAGGCCCAGGGGGAG...GACTGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp TCACGCCACAGTTCTCTCCTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCTGTGCTTCAATTCCATaGTTTTGGCAGGCAGACCAT +
Preference number: 4 (lower is better)
Translates to: SRHSSLLDSACFSSRGLGCASIP*FWQADH
Trigger: ATGGTCTGCCTGCCAAAAGCATGGAATTGAAGCACA...GCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAGGAGAGAACTGTGGCGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp GCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTTGCTGCTGTTTCTTTTaGTTATTGACACTACCGATT +
Preference number: 4 (lower is better)
Translates to: AEAWASMVSMDAVGPHKGCCCFF*LLTLPI
Trigger: AATCGGTAGTGTCAATAAGCAAAAGAAACAGCAGCA...ACCCTTGTGGGGACCCACAGCATCCATGGAAACCATGGAGGCCCAGGCCTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp GGAGGATTCCATTCCGTCACGTGTGTCCTCCACCTTCTCATCTCCACAGTCTCAAAACAGTCTTTTCACTaGTGCCCTCCGTGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: GGFHSVTCVLHLLISTVSKQSFH*CPPWLL
Trigger: AAGCAGCCACGGAGGGCAGCAGTGAAAAGACTGTTT...TGAGACTGTGGAGATGAGAAGGTGGAGGACACACGTGACGGAATGGAATCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp GACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCCTGCTGGTTTCCTGGTaGAATCTTTGCCTGTTCAAA +
Preference number: 4 (lower is better)
Translates to: DSACFSSRGLGLHGFHGCLLVSW*NLCLFK
Trigger: TTTGAACAGGCAAAGATTCCACCAGGAAACCAGCAG...GCATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp AGAGTGGGGTGTGGTTGCACAGCAGGAGGATTCCATTCCGTCACGTGTGTCCTCCTGCTGGTTTCCTGGTaGAATCTTTGCCTGTTCAAA +
Preference number: 4 (lower is better)
Translates to: RVGCGCTAGGFHSVTCVLLLVSW*NLCLFK
Trigger: TTTGAACAGGCAAAGATTCCACCAGGAAACCAGCAG...GAGGACACACGTGACGGAATGGAATCCTCCTGCTGTGCAACCACACCCCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp GATCCAGGATACAGCCATGATGTTGGGGCATCTGCCAATTTCACCACTACCACCTGCTGCTGCCCCTGCTaGTTTCCTGGTGGAATCTTT +
Preference number: 4 (lower is better)
Translates to: DPGYSHDVGASANFTTTTCCCPC*FPGGIF
Trigger: AAAGATTCCACCAGGAAACCAGCAGGGGCAGCAGCA...GGTGGTAGTGGTGAAATTGGCAGATGCCCCAACATCATGGCTGTATCCTGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp CAAGGGTACCAACTACATGGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAGCCTACCCGACCTGTCATaGCTTCTCGGGAGACAATCA +
Preference number: 4 (lower is better)
Translates to: QGYQLHGMCQGKRAPEISLPDLS*LLGRQS
Trigger: TGATTGTCTCCCGAGAAGCCATGACAGGTCGGGTAG...GCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCATGTAGTTGGTACCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp AGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCATTCCTCCCAATTCTaGCATCAGTACCCATGTGTC +
Preference number: 4 (lower is better)
Translates to: RLCLFQQQRPGPPWFPWMHSSQF*HQYPCV
Trigger: GACACATGGGTACTGATGCCAGAATTGGGAGGAATG...CATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp CTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATTGATGCTGGTAGGATaGCAGTGGTCTCCAGATTTC +
Preference number: 4 (lower is better)
Translates to: LDSACFSSRGLGLHGFHGLMLVG*QWSPDF
Trigger: GAAATCTGGAGACCACTGCCATCCTACCAGCATCAA...TCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp AGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCATAAGCATGAGCCCTaGTGTTTGTGTGGTAAGCAG +
Preference number: 4 (lower is better)
Translates to: RLCLFQQQRPGPPWFPWMHKHEP*CLCGKQ
Trigger: CTGCTTACCACACAAACACCAGGGCTCATGCTTATG...CATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp TGGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAGCCATTCCTTGGGTACACCACCACTGCTTTTGGCTaGAGAAGTCTGCCGAGAAAG +
Preference number: 4 (lower is better)
Translates to: WNVPRKEGARDKPFLGYTTTAFG*RSLPRK
Trigger: CTTTCTCGGCAGACTTCTCCAGCCAAAAGCAGTGGT...GGTGTACCCAAGGAATGGCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp ATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTACCAACTACATGGAATGTGAGGACCACTGCTTTTaGCTGGAGAAGTCTGCCGAG +
Preference number: 4 (lower is better)
Translates to: MVSMDAVGPHKGTNYMECEDHCF*LEKSAE
Trigger: CTCGGCAGACTTCTCCAGCCAAAAGCAGTGGTCCTC...ACATTCCATGTAGTTGGTACCCTTGTGGGGACCCACAGCATCCATGGAAACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp AGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGATCTGGCTCATGGGGTaGCCCATACCGTTTTTGATT +
Preference number: 4 (lower is better)
Translates to: RLCLFQQQRPGPPWFPWMIWLMG*PIPFLI
Trigger: AATCAAAAACGGTATGGGCCACCCCATGAGCCAGAT...CATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp CAGGGCAGAGTGGGGTGTGGTTGCACAGCAGGAGGATTCCATTCCGTCACGTGTAACAATCTGCGTCAATaGCACATGGGTAATGGTATC +
Preference number: 4 (lower is better)
Translates to: QGRVGCGCTAGGFHSVTCNNLRQ*HMGNGI
Trigger: GATACCATTACCCATGTGCCATTGACGCAGATTGTT...ACACGTGACGGAATGGAATCCTCCTGCTGTGCAACCACACCCCACTCTGCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp GACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCCTAATCCAAATCCTTTaGATCCTGCAGCATGAGAGT +
Preference number: 4 (lower is better)
Translates to: DSACFSSRGLGLHGFHGCLIQIL*ILQHES
Trigger: ACTCTCATGCTGCAGGATTCAAAGGATTTGGATTAG...GCATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp AGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGGAAGTGATGTGTGGCTaGTTTCCTTTACGCCACTAT +
Preference number: 4 (lower is better)
Translates to: RLCLFQQQRPGPPWFPWMEVMCG*FPLRHY
Trigger: ATAGTGGCGTAAAGGAAATCAGCCACACATCACTTC...CATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp TGGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAGCCATTCCTTGGGTACACCGGCCCATACCGTTTTTaGTTAGACATTCCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: WNVPRKEGARDKPFLGYTGPYRF*LDIPGG
Trigger: TCCTCCAGGAATGTCTAATCAAAAACGGTATGGGCC...GGTGTACCCAAGGAATGGCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp GATCCAGGATACAGCCATGATGTTGGGGCATCTGCCAATTTCACCACTACCACCGGTTTCCGTGGTAACTaGTTTGCTCCCGAAACGACT +
Preference number: 4 (lower is better)
Translates to: DPGYSHDVGASANFTTTTGFRGN*FAPETT
Trigger: AGTCGTTTCGGGAGCAAAGCAGTTACCACGGAAACC...GGTGGTAGTGGTGAAATTGGCAGATGCCCCAACATCATGGCTGTATCCTGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp GGGGCCACAGTGATCCAGGATACAGCCATGATGTTGGGGCATCTGCCAATTTCAAGCTGTTGTCTCAACTaGTGTACTTGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: GATVIQDTAMMLGHLPISSCCLN*CTCCCC
Trigger: ACAGCAGCAGCAAGTACAGCAGTTGAGACAACAGCT...TGAAATTGGCAGATGCCCCAACATCATGGCTGTATCCTGGATCACTGTGGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp CCTGGGCCTCCATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTACCAACTTGTTCCATAAGCCTGTaGATTAGAACCCACATTATG +
Preference number: 4 (lower is better)
Translates to: PGPPWFPWMLWVPTRVPTCSISL*IRTHIM
Trigger: CATAATGTGGGTTCTAATGCACAGGCTTATGGAACA...AGTTGGTACCCTTGTGGGGACCCACAGCATCCATGGAAACCATGGAGGCCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp CCCACATTGTCACTATGGAGATTGTGTCCATGGAAACAGCCATTCCAACATCTTCCTTCCTGCCTATGCTaGGCAGCAGCGATCACTCCC +
Preference number: 4 (lower is better)
Translates to: PTLSLWRLCPWKQPFQHLPSCLC*AAAITP
Trigger: GGGAGTGATCGCTGCTGCGCAGCATAGGCAGGAAGG...AAGATGTTGGAATGGCTGTTTCCATGGACACAATCTCCATAGTGACAATGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp GATCCAGGATACAGCCATGATGTTGGGGCATCTGCCAATTTCACCACTACCACCACTCTGTCAAGAAACTaGTGCTGCCTTGGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: DPGYSHDVGASANFTTTTTLSRN*CCLGLL
Trigger: CAAGAGCCCAAGGCAGCAGCAGTTTCTTGACAGAGT...GGTGGTAGTGGTGAAATTGGCAGATGCCCCAACATCATGGCTGTATCCTGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp TCACGCCACAGTTCTCTCCTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCACCTTGACTTTGCTCTaGATTTCTGAGGACCTCTTA +
Preference number: 4 (lower is better)
Translates to: SRHSSLLDSACFSSRGLGTLTLL*ISEDLL
Trigger: TAAGAGGTCCTCAGAAATGCAGAGCAAAGTCAAGGT...GCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAGGAGAGAACTGTGGCGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp TGGAAACAGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTGCAGCCAGGCTCCTCTaGTCCTTCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: WKQPFQHLVSFFSCGVTSAARLL*SFCCCC
Trigger: GCAGCAGCAGCAGAAGGAGCAGAGGAGCCTGGCTGC...ACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCTGTTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp AGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGTCTATTGTCTGGGTTTaGAAGGTCCTTGGAGGAATC +
Preference number: 4 (lower is better)
Translates to: RLCLFQQQRPGPPWFPWMSIVWV*KVLGGI
Trigger: GATTCCTCCAAGGACCTTCCAAACCCAGACAATAGA...CATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp TCACGCCACAGTTCTCTCCTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCATTGACACTACCGATTaGTCTCCCCTTTTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: SRHSSLLDSACFSSRGLGIDTTD*SPLFLS
Trigger: GGAAAGAAAAAGGGGAGACCAATCGGTAGTGTCAAT...GCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAGGAGAGAACTGTGGCGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp GAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCAGTCTTCCGCTTCCTTGGCTaGGCCCCAGGCTTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: ETDSNQGKGGCHLSTLSVFRFLG*APGFLL
Trigger: GAGAAGGAAGCCTGGGGCCCAGCCAAGGAAGCGGAA...GACTGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp GGGGCCACAGTGATCCAGGATACAGCCATGATGTTGGGGCATCTGCCAATTTCATGGGAACTGCTTGTTTaGTTTTCCGCTTCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: GATVIQDTAMMLGHLPISWELLV*FSASLA
Trigger: AGCCAAGGAAGCGGAAAACCAAACAAGCAGTTCCCA...TGAAATTGGCAGATGCCCCAACATCATGGCTGTATCCTGGATCACTGTGGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp TGGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAGCCATTCCTTGGGTACACCTGGGAACTGCTTGTTTaGTTTTCCGCTTCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: WNVPRKEGARDKPFLGYTWELLV*FSASLA
Trigger: AGCCAAGGAAGCGGAAAACCAAACAAGCAGTTCCCA...GGTGTACCCAAGGAATGGCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp CCTGGGCCTCCATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTACCAACTCTTGAGGTTCTACAATaGGAACTGCTTGTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: PGPPWFPWMLWVPTRVPTLEVLQ*ELLVWF
Trigger: AAACCAAACAAGCAGTTCCCATTGTAGAACCTCAAG...AGTTGGTACCCTTGTGGGGACCCACAGCATCCATGGAAACCATGGAGGCCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp GGGGCCACAGTGATCCAGGATACAGCCATGATGTTGGGGCATCTGCCAATTTCACCAGGTAGATTCCATTaGCCCAGAGAATACAACCCT +
Preference number: 4 (lower is better)
Translates to: GATVIQDTAMMLGHLPISPGRFH*PREYNP
Trigger: AGGGTTGTATTCTCTGGGCCAATGGAATCTACCTGG...TGAAATTGGCAGATGCCCCAACATCATGGCTGTATCCTGGATCACTGTGGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp TGGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAGCCATTCCTTGGGTACACCTGCGTCAATGGCACATaGGTAATGGTATCGGAAGGA +
Preference number: 4 (lower is better)
Translates to: WNVPRKEGARDKPFLGYTCVNGT*VMVSEG
Trigger: TCCTTCCGATACCATTACCCATGTGCCATTGACGCA...GGTGTACCCAAGGAATGGCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp TGGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAGCCATTCCTTGGGTACACCTTATGCCCTTCATACTaGGATCCAGCATTCACACTG +
Preference number: 4 (lower is better)
Translates to: WNVPRKEGARDKPFLGYTLCPSY*DPAFTL
Trigger: CAGTGTGAATGCTGGATCTCAGTATGAAGGGCATAA...GGTGTACCCAAGGAATGGCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp AGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCTAATCCAAATCCTTTaGATCCTGCAGCATGAGAGT +
Preference number: 4 (lower is better)
Translates to: RLCLFQQQRPGPPWFPWMLIQIL*ILQHES
Trigger: ACTCTCATGCTGCAGGATTCAAAGGATTTGGATTAG...CATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp GGAGGATTCCATTCCGTCACGTGTGTCCTCCACCTTCTCATCTCCACAGTCTCAGACTCTTGTAACTTCTaGGAGCTGTGCTTCAATTCC +
Preference number: 4 (lower is better)
Translates to: GGFHSVTCVLHLLISTVSDSCNF*ELCFNS
Trigger: GGAATTGAAGCACAGCTCTCAGAAGTTACAAGAGTC...TGAGACTGTGGAGATGAGAAGGTGGAGGACACACGTGACGGAATGGAATCCTCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp TCACGCCACAGTTCTCTCCTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCGTTTGGGTGAAATCATaGCTGTATCGTTCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: SRHSSLLDSACFSSRGLGVWVKS*LYRSLS
Trigger: AGAAAGAGAACGATACAGTCATGATTTCACCCAAAC...GCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAGGAGAGAACTGTGGCGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp ATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTACCAACTACATGGAATGTTTTGCTCTGCATTTCTaGGGACCTCTTAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: MVSMDAVGPHKGTNYMECFALHF*GPLRRW
Trigger: CCACCTCCTAAGAGGTCCTCAGAAATGCAGAGCAAA...ACATTCCATGTAGTTGGTACCCTTGTGGGGACCCACAGCATCCATGGAAACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp TGTGAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCATCCACCACAGTCTTCTaGGCGGTGGCGCCGCTTGAA +
Preference number: 4 (lower is better)
Translates to: CETDSNQGKGGCHLSTLSSTTVF*AVAPLE
Trigger: TTCAAGCGGCGCCACCGCTCAGAAGACTGTGGTGGA...TGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp CCCACATTGTCACTATGGAGATTGTGTCCATGGAAACAGCCATTCCAACATCTTCTCAGGCCCACCTTCTaGAGTGGTAGGTACAGAGGG +
Preference number: 4 (lower is better)
Translates to: PTLSLWRLCPWKQPFQHLLRPTF*SGRYRG
Trigger: CCCTCTGTACCTACCACTTCAGAAGGTGGGCCTGAG...AAGATGTTGGAATGGCTGTTTCCATGGACACAATCTCCATAGTGACAATGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp CAAGGGTACCAACTACATGGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAGCCCCTTGATGTTCCTGTaGGCTTCTAGGATACCTTCT +
Preference number: 4 (lower is better)
Translates to: QGYQLHGMCQGKRAPEISPLMFL*ASRIPS
Trigger: AGAAGGTATCCTAGAAGCGCACAGGAACATCAAGGG...GCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCATGTAGTTGGTACCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp AGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCTTCGGAAGAGTGGCTaGATAATCTTGGGGATAAAA +
Preference number: 4 (lower is better)
Translates to: RLCLFQQQRPGPPWFPWMLRKSG*IILGIK
Trigger: TTTTATCCCCAAGATTATGCAGCCACTCTTCCGAAG...CATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp CAAGGGTACCAACTACATGGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAGCATAGGGCTGAAATTCTaGTGGAACTGCATGGGAGAC +
Preference number: 4 (lower is better)
Translates to: QGYQLHGMCQGKRAPEISIGLKF*WNCMGD
Trigger: GTCTCCCATGCAGTTCCACCAGAATTTCAGCCCTAT...GCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCATGTAGTTGGTACCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp CTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGAGTAAAATTCGGTTTCTaGAACTCATGGGCACATTGC +
Preference number: 4 (lower is better)
Translates to: LDSACFSSRGLGLHGFHGVKFGF*NSWAHC
Trigger: GCAATGTGCCCATGAGTTCCAGAAACCGAATTTTAC...TCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp ATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTACCAACTACATGGAATGTGGCCATAGTCTGAAATaGAATCATGGGCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: MVSMDAVGPHKGTNYMECGHSLK*NHGLLL
Trigger: GAGCAGCAGCCCATGATTCCATTTCAGACTATGGCC...ACATTCCATGTAGTTGGTACCCTTGTGGGGACCCACAGCATCCATGGAAACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp AGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGGTAAAGAACTCCTATTaGCCCTCTCTGAAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: RLCLFQQQRPGPPWFPWMVKNSY*PSLKRS
Trigger: TGACCTTTTCAGAGAGGGCCAATAGGAGTTCTTTAC...CATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp GATCCAGGATACAGCCATGATGTTGGGGCATCTGCCAATTTCACCACTACCACCCATAAGCATGAGCCCTaGTGTTTGTGTGGTAAGCAG +
Preference number: 4 (lower is better)
Translates to: DPGYSHDVGASANFTTTTHKHEP*CLCGKQ
Trigger: CTGCTTACCACACAAACACCAGGGCTCATGCTTATG...GGTGGTAGTGGTGAAATTGGCAGATGCCCCAACATCATGGCTGTATCCTGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp GAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCAGTCAAACTGCTGCTGCCTTaGGCTCTTGCGTGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: ETDSNQGKGGCHLSTLSVKLLLP*ALAWAF
Trigger: GAAGGCCCACGCAAGAGCCCAAGGCAGCAGCAGTTT...GACTGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp TCACGCCACAGTTCTCTCCTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCTCAACATTCGATTCCTaGTTAGTTACACTGACTAGG +
Preference number: 4 (lower is better)
Translates to: SRHSSLLDSACFSSRGLGSTFDS*LVTLTR
Trigger: CCTAGTCAGTGTAACTAACCAGGAATCGAATGTTGA...GCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAGGAGAGAACTGTGGCGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp ATGGAAACAGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTCCGCTTCCTTGGCTaGGCCCCAGGCTTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: METAIPTSCIFLFLWCHQFRFLG*APGFLL
Trigger: GAGAAGGAAGCCTGGGGCCCAGCCAAGGAAGCGGAA...CTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCTGTTTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp AGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGAACAATCTGCGTCAATaGCACATGGGTAATGGTATC +
Preference number: 4 (lower is better)
Translates to: RLCLFQQQRPGPPWFPWMNNLRQ*HMGNGI
Trigger: GATACCATTACCCATGTGCCATTGACGCAGATTGTT...CATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp GAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCAGTCGGGGAGGCTTGTGCTTaGGGCACCTCACCGAGAAAT +
Preference number: 4 (lower is better)
Translates to: ETDSNQGKGGCHLSTLSVGEACA*GTSPRN
Trigger: ATTTCTCGGTGAGGTGCCCCAAGCACAAGCCTCCCC...GACTGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp TGGAAACAGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTGCGGCTGCTGTTGCTaGGGTTGTGGTTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: WKQPFQHLVSFFSCGVTSCGCCC*GCGCCC
Trigger: ACAGCAGCAACCACAACCTCAGCAACAGCAGCCGCA...ACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCTGTTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp GATCCAGGATACAGCCATGATGTTGGGGCATCTGCCAATTTCACCACTACCACCGGAAGATTGGCCACTTaGCTACTCAAAGCACTCAAA +
Preference number: 4 (lower is better)
Translates to: DPGYSHDVGASANFTTTTGRLAT*LLKALK
Trigger: TTTGAGTGCTTTGAGTAGTCAAGTGGCCAATCTTCC...GGTGGTAGTGGTGAAATTGGCAGATGCCCCAACATCATGGCTGTATCCTGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp CAAGGGTACCAACTACATGGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAGCACCCACCAGGAAGAATaGCTGACTGACTTAAACTTG +
Preference number: 4 (lower is better)
Translates to: QGYQLHGMCQGKRAPEISTHQEE*LTDLNL
Trigger: CAAGTTTAAGTCAGTCAGTCATTCTTCCTGGTGGGT...GCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCATGTAGTTGGTACCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp TCACGCCACAGTTCTCTCCTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCGGAGATGTGATCTTCTaGACTATAGCTTCCAATTTT +
Preference number: 4 (lower is better)
Translates to: SRHSSLLDSACFSSRGLGGDVIF*TIASNF
Trigger: AAAATTGGAAGCTATAGTTCAGAAGATCACATCTCC...GCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAGGAGAGAACTGTGGCGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp CCCACATTGTCACTATGGAGATTGTGTCCATGGAAACAGCCATTCCAACATCTTTCCATCTCAGCCTCTTaGGTAGCCACAGTGCCACCT +
Preference number: 4 (lower is better)
Translates to: PTLSLWRLCPWKQPFQHLSISAS*VATVPP
Trigger: AGGTGGCACTGTGGCTACTCAAGAGGCTGAGATGGA...AAGATGTTGGAATGGCTGTTTCCATGGACACAATCTCCATAGTGACAATGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp CAAGGGTACCAACTACATGGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAGCAGAGGGCTTTGTGTCTaGAACAGTCTTTTCACTGCT +
Preference number: 4 (lower is better)
Translates to: QGYQLHGMCQGKRAPEISRGLCV*NSLFTA
Trigger: AGCAGTGAAAAGACTGTTTCAGACACAAAGCCCTCT...GCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCATGTAGTTGGTACCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp GAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCAGTCTACTGCTGCTGCCAGTaGCACTACTACCACCACCTG +
Preference number: 4 (lower is better)
Translates to: ETDSNQGKGGCHLSTLSVYCCCQ*HYYHHL
Trigger: CAGGTGGTGGTAGTAGTGGCACTGGCAGCAGCAGTA...GACTGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp TGGAAACAGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTGGTCTCACTAGCCATTaGTGCCGCTGCAGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: WKQPFQHLVSFFSCGVTSGLTSH*CRCSSC
Trigger: ACAGCTGCTGCAGCGGCAGCAATGGCTAGTGAGACC...ACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCTGTTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp TGGAAACAGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTGCTGCTGCTGCTGCTaGTGTTGTTGGCTAGAGGCC +
Preference number: 4 (lower is better)
Translates to: WKQPFQHLVSFFSCGVTSCCCCC*CCWLEA
Trigger: GGCCTCTAGCCAACAACAGCAGCAGCAGCAGCAGCA...ACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCTGTTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp GGAGGATTCCATTCCGTCACGTGTGTCCTCCACCTTCTCATCTCCACAGTCTCACATTCACACTGTAACTaGCATCATAGCTTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: GGFHSVTCVLHLLISTVSHSHCN*HHSFVQ
Trigger: CTGGACAAAGCTATGATGGCAGTTACAGTGTGAATG...TGAGACTGTGGAGATGAGAAGGTGGAGGACACACGTGACGGAATGGAATCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp CCTGGGCCTCCATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTACCAACTTCCTGGTGGAATCTTTaGCTGTTCAAAATTTTTCAT +
Preference number: 4 (lower is better)
Translates to: PGPPWFPWMLWVPTRVPTSWWNL*LFKIFH
Trigger: ATGAAAAATTTTGAACAGGCAAAGATTCCACCAGGA...AGTTGGTACCCTTGTGGGGACCCACAGCATCCATGGAAACCATGGAGGCCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp CAGGGCAGAGTGGGGTGTGGTTGCACAGCAGGAGGATTCCATTCCGTCACGTGTTCCTGGTGGAATCTTTaGCTGTTCAAAATTTTTCAT +
Preference number: 4 (lower is better)
Translates to: QGRVGCGCTAGGFHSVTCSWWNL*LFKIFH
Trigger: ATGAAAAATTTTGAACAGGCAAAGATTCCACCAGGA...ACACGTGACGGAATGGAATCCTCCTGCTGTGCAACCACACCCCACTCTGCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp ATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTACCAACTACATGGAATGTTTTCAGGAGCTGTGCTaGTTGACTTCCTTTCCCATG +
Preference number: 4 (lower is better)
Translates to: MVSMDAVGPHKGTNYMECFQELC*LTSFPM
Trigger: CATGGGAAAGGAAGTCAAGCAGCACAGCTCCTGAAA...ACATTCCATGTAGTTGGTACCCTTGTGGGGACCCACAGCATCCATGGAAACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp ATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTACCAACTACATGGAATGTCTCCAGGACTTGCATTaGCACGGTAAGTCTCATGTT +
Preference number: 4 (lower is better)
Translates to: MVSMDAVGPHKGTNYMECLQDLH*HGKSHV
Trigger: AACATGAGACTTACCGTGGCAATGCAAGTCCTGGAG...ACATTCCATGTAGTTGGTACCCTTGTGGGGACCCACAGCATCCATGGAAACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp CCCACATTGTCACTATGGAGATTGTGTCCATGGAAACAGCCATTCCAACATCTTGGAATCATGGGCTGCTaGTCCAGGACTTGCATTGCC +
Preference number: 4 (lower is better)
Translates to: PTLSLWRLCPWKQPFQHLGIMGC*SRTCIA
Trigger: GGCAATGCAAGTCCTGGAGCAGCAGCCCATGATTCC...AAGATGTTGGAATGGCTGTTTCCATGGACACAATCTCCATAGTGACAATGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp ATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTACCAACTACATGGAATGTAATGGAATCATGGGCTaGTGCTCCAGGACTTGCATT +
Preference number: 4 (lower is better)
Translates to: MVSMDAVGPHKGTNYMECNGIMG*CSRTCI
Trigger: AATGCAAGTCCTGGAGCAGCAGCCCATGATTCCATT...ACATTCCATGTAGTTGGTACCCTTGTGGGGACCCACAGCATCCATGGAAACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp CAATACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTCTCCCCCTGGGCCTCTaGTCCTGCCTGGAGACATCT +
Preference number: 4 (lower is better)
Translates to: QYNIKNHIAWATYLTSPLLPLGL*SCLETS
Trigger: AGATGTCTCCAGGCAGGAGCAGAGGCCCAGGGGGAG...AAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp ATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTACCAACTACATGGAATGTAGCCTCAGCACTGTTTaGAGATGCACTCCTCCTAAT +
Preference number: 4 (lower is better)
Translates to: MVSMDAVGPHKGTNYMECSLSTV*RCTPPN
Trigger: ATTAGGAGGAGTGCATCTGCAAACAGTGCTGAGGCT...ACATTCCATGTAGTTGGTACCCTTGTGGGGACCCACAGCATCCATGGAAACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp GATCCAGGATACAGCCATGATGTTGGGGCATCTGCCAATTTCACCACTACCACCGGAGGTGGTTGCTGCTaGTGTTTCTTTTGCTTATTG +
Preference number: 4 (lower is better)
Translates to: DPGYSHDVGASANFTTTTGGGCC*CFFCLL
Trigger: CAATAAGCAAAAGAAACAGCAGCAGCAACCACCTCC...GGTGGTAGTGGTGAAATTGGCAGATGCCCCAACATCATGGCTGTATCCTGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp AGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGTTCTACAATGGGAACTaGTTGTTTGGTTTTCCGCTT +
Preference number: 4 (lower is better)
Translates to: RLCLFQQQRPGPPWFPWMFYNGN*LFGFPL
Trigger: AAGCGGAAAACCAAACAAGCAGTTCCCATTGTAGAA...CATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp GAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCAGTCAGGCTGGCTGTCCAGTaGTTTGTGGCAGAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: ETDSNQGKGGCHLSTLSVRLAVQ*FVAEAD
Trigger: ATCAGCCTCTGCCACAAACCACTGGACAGCCAGCCT...GACTGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp CAAGGGTACCAACTACATGGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAGCATGATACGTACCTACTaGTGGGCCATACATCATTCC +
Preference number: 4 (lower is better)
Translates to: QGYQLHGMCQGKRAPEISMIRTY*WAIHHS
Trigger: GGAATGATGTATGGCCCACCAGTAGGTACGTATCAT...GCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCATGTAGTTGGTACCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp CCCACATTGTCACTATGGAGATTGTGTCCATGGAAACAGCCATTCCAACATCTTGAGGACCACTGCTTTTaGCTGGAGAAGTCTGCCGAG +
Preference number: 4 (lower is better)
Translates to: PTLSLWRLCPWKQPFQHLEDHCF*LEKSAE
Trigger: CTCGGCAGACTTCTCCAGCCAAAAGCAGTGGTCCTC...AAGATGTTGGAATGGCTGTTTCCATGGACACAATCTCCATAGTGACAATGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp CAAGGGTACCAACTACATGGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAGCTCTATTGTCTGGGTTTaGAAGGTCCTTGGAGGAATC +
Preference number: 4 (lower is better)
Translates to: QGYQLHGMCQGKRAPEISSIVWV*KVLGGI
Trigger: GATTCCTCCAAGGACCTTCCAAACCCAGACAATAGA...GCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCATGTAGTTGGTACCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp GGAGGATTCCATTCCGTCACGTGTGTCCTCCACCTTCTCATCTCCACAGTCTCAACAGTTTCTATTGTCTaGGTTTGGAAGGTCCTTGGA +
Preference number: 4 (lower is better)
Translates to: GGFHSVTCVLHLLISTVSTVSIV*VWKVLG
Trigger: TCCAAGGACCTTCCAAACCCAGACAATAGAAACTGT...TGAGACTGTGGAGATGAGAAGGTGGAGGACACACGTGACGGAATGGAATCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp CAAGGGTACCAACTACATGGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAGCGGCTCCTCACCAATTTaGTCTGTTCTTCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: QGYQLHGMCQGKRAPEISGSSPI*SVLLLQ
Trigger: CTGAAGAAGAAGAACAGACCAAATTGGTGAGGAGCC...GCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCATGTAGTTGGTACCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp TGTGAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCAAGAAGATGGCAGAGTTaGGGGCCGCTGCATTGGTTG +
Preference number: 4 (lower is better)
Translates to: CETDSNQGKGGCHLSTLSRRWQS*GPLHWL
Trigger: CAACCAATGCAGCGGCCCTCAACTCTGCCATCTTCT...TGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp ATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTACCAACTACATGGAATGTGGAAGATTGGCCACTTaGCTACTCAAAGCACTCAAA +
Preference number: 4 (lower is better)
Translates to: MVSMDAVGPHKGTNYMECGRLAT*LLKALK
Trigger: TTTGAGTGCTTTGAGTAGTCAAGTGGCCAATCTTCC...ACATTCCATGTAGTTGGTACCCTTGTGGGGACCCACAGCATCCATGGAAACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp CCCACATTGTCACTATGGAGATTGTGTCCATGGAAACAGCCATTCCAACATCTTGCAACCTCCATCCAATaGCTCAGCCATAGGGGACTT +
Preference number: 4 (lower is better)
Translates to: PTLSLWRLCPWKQPFQHLATSIQ*LSHRGL
Trigger: AAGTCCCCTATGGCTGAGTCATTGGATGGAGGTTGC...AAGATGTTGGAATGGCTGTTTCCATGGACACAATCTCCATAGTGACAATGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp CCCACATTGTCACTATGGAGATTGTGTCCATGGAAACAGCCATTCCAACATCTTGGAGCCAGCTTTCTCTaGAGCGCCACACTTATAGGT +
Preference number: 4 (lower is better)
Translates to: PTLSLWRLCPWKQPFQHLGASFL*SATLIG
Trigger: ACCTATAAGTGTGGCGCTTCAGAGAAAGCTGGCTCC...AAGATGTTGGAATGGCTGTTTCCATGGACACAATCTCCATAGTGACAATGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp ATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTCCACTCTAATGTGTCCCAATGAGTaGGCCCCTGGGTCCCTGACA +
Preference number: 4 (lower is better)
Translates to: IKNHIAWATYLTSPLSTLMCPNE*APGSLT
Trigger: TGTCAGGGACCCAGGGGCTCACTCATTGGGACACAT...TAGAGTGGAAAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp TGTGAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCAGCAAAGTCATGGTACTaGGAAGAGGACCGACCCCTC +
Preference number: 4 (lower is better)
Translates to: CETDSNQGKGGCHLSTLSAKSWY*EEDRPL
Trigger: GAGGGGTCGGTCCTCTTCTCAGTACCATGACTTTGC...TGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp ATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGTGTGATATCGGCACCTTCTTTTaGTGGGTGGAGGAGGCGCCC +
Preference number: 4 (lower is better)
Translates to: IPTSCIFLFLWCHQFECDIGTFF*WVEEAP
Trigger: GGGCGCCTCCTCCACCCATCAAAAGAAGGTGCCGAT...ATCACACTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp CAATACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTATCGGCACCTTCTTTTaGTGGGTGGAGGAGGCGCCC +
Preference number: 4 (lower is better)
Translates to: QYNIKNHIAWATYLTSPLIGTFF*WVEEAP
Trigger: GGGCGCCTCCTCCACCCATCAAAAGAAGGTGCCGAT...AAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp CTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGAGGAGATGTGATCTTCTaGACTATAGCTTCCAATTTT +
Preference number: 4 (lower is better)
Translates to: LDSACFSSRGLGLHGFHGGDVIF*TIASNF
Trigger: AAAATTGGAAGCTATAGTTCAGAAGATCACATCTCC...TCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp AGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGACTTTCTTGTTTGGGTaGAATCATGACTGTATCGTT +
Preference number: 4 (lower is better)
Translates to: RLCLFQQQRPGPPWFPWMTFLFG*NHDCIV
Trigger: AACGATACAGTCATGATTTCACCCAAACAAGAAAGT...CATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp ATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTCCACTCTAGGTCTCACTAGCCATTaGTGCCGCTGCAGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: IKNHIAWATYLTSPLSTLGLTSH*CRCSSC
Trigger: ACAGCTGCTGCAGCGGCAGCAATGGCTAGTGAGACC...TAGAGTGGAAAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp GAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCAGTCAGGCTGTGGGGTTCCTaGTGCCACTGTGTCTTTGTT +
Preference number: 4 (lower is better)
Translates to: ETDSNQGKGGCHLSTLSVRLWGS*CHCVFV
Trigger: AACAAAGACACAGTGGCAGCAGGAACCCCACAGCCT...GACTGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp ATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTCCACTCTATGCTGCTGCTGCCCCTaGTGGTTTCCTGGTGGAATC +
Preference number: 4 (lower is better)
Translates to: IKNHIAWATYLTSPLSTLCCCCP*WFPGGI
Trigger: GATTCCACCAGGAAACCAGCAGGGGCAGCAGCAGCA...TAGAGTGGAAAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp TACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTCCTGCTGCTGTTGCTGCTaGTGCCCCTGCTGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: YNIKNHIAWATYLTSPLSCCCCC*CPCWFP
Trigger: AGGAAACCAGCAGGGGCAGCAGCAGCAACAGCAGCA...GGAAAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp ATGGAAACAGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTGCCCAACCTGGCTTTaGAGAGGCATCTTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: METAIPTSCIFLFLWCHQCPTWL*RGILVA
Trigger: TGCCACCAAGATGCCTCTGCAAAGCCAGGTTGGGCA...CTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCTGTTTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp TGTGAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCATGCCCAACCTGGCTTTaGAGAGGCATCTTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: CETDSNQGKGGCHLSTLSCPTWL*RGILVA
Trigger: TGCCACCAAGATGCCTCTGCAAAGCCAGGTTGGGCA...TGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp GGAGGATTCCATTCCGTCACGTGTGTCCTCCACCTTCTCATCTCCACAGTCTCATTATACTCCTCTTGTTaGTGTTGGTACATCTGTCTC +
Preference number: 4 (lower is better)
Translates to: GGFHSVTCVLHLLISTVSLYSSC*CWYICL
Trigger: GAGACAGATGTACCAACAGCAACAAGAGGAGTATAA...TGAGACTGTGGAGATGAGAAGGTGGAGGACACACGTGACGGAATGGAATCCTCC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp ATGGAAACAGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTCAAGAAACTGCTGCTaGCTTGGGCTCTTGCGTGGG +
Preference number: 4 (lower is better)
Translates to: METAIPTSCIFLFLWCHQSRNCC*LGLLRG
Trigger: CCCACGCAAGAGCCCAAGGCAGCAGCAGTTTCTTGA...CTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCTGTTTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp GGGGCCACAGTGATCCAGGATACAGCCATGATGTTGGGGCATCTGCCAATTTCATTCTACAATGGGAACTaGTTGTTTGGTTTTCCGCTT +
Preference number: 4 (lower is better)
Translates to: GATVIQDTAMMLGHLPISFYNGN*LFGFPL
Trigger: AAGCGGAAAACCAAACAAGCAGTTCCCATTGTAGAA...TGAAATTGGCAGATGCCCCAACATCATGGCTGTATCCTGGATCACTGTGGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp CAAGGGTACCAACTACATGGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAGCACCTTGACTTTGCTCTaGATTTCTGAGGACCTCTTA +
Preference number: 4 (lower is better)
Translates to: QGYQLHGMCQGKRAPEISTLTLL*ISEDLL
Trigger: TAAGAGGTCCTCAGAAATGCAGAGCAAAGTCAAGGT...GCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCATGTAGTTGGTACCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp TACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTCCCACAGTCTCACCTTGTaGTTGGGGCACCTCACCGAG +
Preference number: 4 (lower is better)
Translates to: YNIKNHIAWATYLTSPLSHSLTL*LGHLTE
Trigger: CTCGGTGAGGTGCCCCAAGCACAAGGTGAGACTGTG...GGAAAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048966.7
CDS-3UTR CCA 90 bp TGTGAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCATGGAACATCTGGGCCTaGCGAGGGCTGAACTCTTCT +
Preference number: 4 (lower is better)
Translates to: CETDSNQGKGGCHLSTLSWNIWA*RGLNSS
Trigger: AGAAGAGTTCAGCCCTCGCCAGGCCCAGATGTTCCA...TGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp GAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCAGTCCTGTCCAGTGGTTTGTaGCAGAGGCTGATGGGATTG +
Preference number: 4 (lower is better)
Translates to: ETDSNQGKGGCHLSTLSVLSSGL*QRLMGL
Trigger: CAATCCCATCAGCCTCTGCCACAAACCACTGGACAG...GACTGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp CCCACATTGTCACTATGGAGATTGTGTCCATGGAAACAGCCATTCCAACATCTTTACTGCATCACATGCTaGGGAGGATGTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PTLSLWRLCPWKQPFQHLYCITC*GGCCCC
Trigger: GCAGCAGCAACATCCTCCCCAGCATGTGATGCAGTA...AAGATGTTGGAATGGCTGTTTCCATGGACACAATCTCCATAGTGACAATGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp CCCACATTGTCACTATGGAGATTGTGTCCATGGAAACAGCCATTCCAACATCTTCCCTTTCGCTCTCCATaGCTGCCAAAATCCCCCTTT +
Preference number: 4 (lower is better)
Translates to: PTLSLWRLCPWKQPFQHLPFRSP*LPKSPF
Trigger: AAAGGGGGATTTTGGCAGCCATGGAGAGCGAAAGGG...AAGATGTTGGAATGGCTGTTTCCATGGACACAATCTCCATAGTGACAATGTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp CAAGGGTACCAACTACATGGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAGCATTGACACTACCGATTaGTCTCCCCTTTTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: QGYQLHGMCQGKRAPEISIDTTD*SPLFLS
Trigger: GGAAAGAAAAAGGGGAGACCAATCGGTAGTGTCAAT...GCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCATGTAGTTGGTACCCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp TGTGAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCAGGAGCCAGCTTTCTCTaGAGCGCCACACTTATAGGT +
Preference number: 4 (lower is better)
Translates to: CETDSNQGKGGCHLSTLSGASFL*SATLIG
Trigger: ACCTATAAGTGTGGCGCTTCAGAGAAAGCTGGCTCC...TGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp ATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTCCACTCTATTGCTAGGTGGTCTCTaGCTGGCAGCAGGATCATCC +
Preference number: 4 (lower is better)
Translates to: IKNHIAWATYLTSPLSTLLLGGL*LAAGSS
Trigger: GGATGATCCTGCTGCCAGTCAGAGACCACCTAGCAA...TAGAGTGGAAAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp GGGGCCACAGTGATCCAGGATACAGCCATGATGTTGGGGCATCTGCCAATTTCAACTTTCTTGTTTGGGTaGAATCATGACTGTATCGTT +
Preference number: 4 (lower is better)
Translates to: GATVIQDTAMMLGHLPISTFLFG*NHDCIV
Trigger: AACGATACAGTCATGATTTCACCCAAACAAGAAAGT...TGAAATTGGCAGATGCCCCAACATCATGGCTGTATCCTGGATCACTGTGGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp ATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGTGTGATTGCTGCTGCTGCTGCTaGTGTTGTTGGCTAGAGGCC +
Preference number: 4 (lower is better)
Translates to: IPTSCIFLFLWCHQFECDCCCCC*CCWLEA
Trigger: GGCCTCTAGCCAACAACAGCAGCAGCAGCAGCAGCA...ATCACACTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp TGTGAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCATGCATTGGTTGTAGATaGGATGAGCCAGAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: CETDSNQGKGGCHLSTLSCIGCR*DEPEAG
Trigger: GCCAGCCTCTGGCTCATCGCATCTACAACCAATGCA...TGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp GAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCAGTCAGAGTTGAGGGCCGCTaGATTGGTTGTAGATGCGAT +
Preference number: 4 (lower is better)
Translates to: ETDSNQGKGGCHLSTLSVRVEGR*IGCRCD
Trigger: ATCGCATCTACAACCAATGCAGCGGCCCTCAACTCT...GACTGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp GATCCAGGATACAGCCATGATGTTGGGGCATCTGCCAATTTCACCACTACCACCTGTTCCATAAGCCTGTaGATTAGAACCCACATTATG +
Preference number: 4 (lower is better)
Translates to: DPGYSHDVGASANFTTTTCSISL*IRTHIM
Trigger: CATAATGTGGGTTCTAATGCACAGGCTTATGGAACA...GGTGGTAGTGGTGAAATTGGCAGATGCCCCAACATCATGGCTGTATCCTGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp CTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGACATCTTCAATTTTTCTaGAAAGTCATGGTACTGAGA +
Preference number: 4 (lower is better)
Translates to: LDSACFSSRGLGLHGFHGHLQFF*KVMVLR
Trigger: TCTCAGTACCATGACTTTGCAGAAAAATTGAAGATG...TCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp ATGGAAACAGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGCTGTCAAGAAACTGCTaGTGCCTTGGGCTCTTGCGT +
Preference number: 4 (lower is better)
Translates to: METAIPTSCIFLFLWCHQLSRNC*CLGLLR
Trigger: ACGCAAGAGCCCAAGGCAGCAGCAGTTTCTTGACAG...CTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCTGTTTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp ATGGAAACAGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGCCTCAGGGGCCAATATaGCCACTGGAGCTACATTCT +
Preference number: 4 (lower is better)
Translates to: METAIPTSCIFLFLWCHQPQGPI*PLELHS
Trigger: AGAATGTAGCTCCAGTGGGCATATTGGCCCCTGAGG...CTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCTGTTTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp ATGGAAACAGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTCAGCCTTGGGATTTaGCTCAGGGGCCAATATGCC +
Preference number: 4 (lower is better)
Translates to: METAIPTSCIFLFLWCHQFSLGI*LRGQYA
Trigger: GGCATATTGGCCCCTGAGGCAAATCCCAAGGCTGAA...CTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCTGTTTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp CAATACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTAAGCTGGGAGCACCTTaGTTTCTGTGCTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: QYNIKNHIAWATYLTSPLKLGAP*FLCCWG
Trigger: CCCCCAGCAGCACAGAAAGCAAGGTGCTCCCAGCTT...AAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp TGTGAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCAGGTAACTGGCCCACTTaGCACAGAGACAGCAAACCA +
Preference number: 4 (lower is better)
Translates to: CETDSNQGKGGCHLSTLSGNWPT*HRDSKP
Trigger: TGGTTTGCTGTCTCTGTGGCAAGTGGGCCAGTTACC...TGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp TGGAAACAGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTGGTAACTGGCCCACTTaGCACAGAGACAGCAAACCA +
Preference number: 4 (lower is better)
Translates to: WKQPFQHLVSFFSCGVTSGNWPT*HRDSKP
Trigger: TGGTTTGCTGTCTCTGTGGCAAGTGGGCCAGTTACC...ACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCTGTTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp CCCACATTGTCACTATGGAGATTGTGTCCATGGAAACAGCCATTCCAACATCTTCAGTCTTTTCACTGCTaGCCTCCGTGGCTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: PTLSLWRLCPWKQPFQHLQSFHC*PPWLLF
Trigger: AAAAAGCAGCCACGGAGGGCAGCAGTGAAAAGACTG...AAGATGTTGGAATGGCTGTTTCCATGGACACAATCTCCATAGTGACAATGTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp TACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTCCGCAGGCCATAGAGCCTaGCACAGACCAGGTAGATTC +
Preference number: 4 (lower is better)
Translates to: YNIKNHIAWATYLTSPLSAGHRA*HRPGRF
Trigger: GAATCTACCTGGTCTGTGGCAGGCTCTATGGCCTGC...GGAAAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp TGTGAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCACCCCTGCTGGTTTCCTaGTGGAATCTTTGCCTGTTC +
Preference number: 4 (lower is better)
Translates to: CETDSNQGKGGCHLSTLSPLLVS*WNLCLF
Trigger: GAACAGGCAAAGATTCCACCAGGAAACCAGCAGGGG...TGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp GAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCAGTCGCAGAGGCATCTTGGTaGCAGCATTTGTGTACTGCA +
Preference number: 4 (lower is better)
Translates to: ETDSNQGKGGCHLSTLSVAEASW*QHLCTA
Trigger: TGCAGTACACAAATGCTGCCACCAAGATGCCTCTGC...GACTGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp CCCACATTGTCACTATGGAGATTGTGTCCATGGAAACAGCCATTCCAACATCTTTTGTACTGCCCAACCTaGCTTTGCAGAGGCATCTTG +
Preference number: 4 (lower is better)
Translates to: PTLSLWRLCPWKQPFQHLLYCPT*LCRGIL
Trigger: CAAGATGCCTCTGCAAAGCCAGGTTGGGCAGTACAA...AAGATGTTGGAATGGCTGTTTCCATGGACACAATCTCCATAGTGACAATGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp ATGGAAACAGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGGGTTTCTGGAACTCATaGGCACATTGCCTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: METAIPTSCIFLFLWCHQGFWNS*AHCLAH
Trigger: GTGGGCAAGGCAATGTGCCCATGAGTTCCAGAAACC...CTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCTGTTTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp CCCACATTGTCACTATGGAGATTGTGTCCATGGAAACAGCCATTCCAACATCTTGCAGGATCATCCTCCTaGGAGCCTTTATCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: PTLSLWRLCPWKQPFQHLAGSSS*EPLSCP
Trigger: TGGACAAGATAAAGGCTCCCAGGAGGATGATCCTGC...AAGATGTTGGAATGGCTGTTTCCATGGACACAATCTCCATAGTGACAATGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp CAATACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTAGGGACCCGCCGCATTaGTGTGGACCTGCTATCTTG +
Preference number: 4 (lower is better)
Translates to: QYNIKNHIAWATYLTSPLRDPPH*CGPAIL
Trigger: CAAGATAGCAGGTCCACACCAATGCGGCGGGTCCCT...AAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp ATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTACCAACTACATGGAATGTAGAATACAACCCTCATaGACCCAAAATTCGTTGCTG +
Preference number: 4 (lower is better)
Translates to: MVSMDAVGPHKGTNYMECRIQPS*TQNSLL
Trigger: CAGCAACGAATTTTGGGTCCATGAGGGTTGTATTCT...ACATTCCATGTAGTTGGTACCCTTGTGGGGACCCACAGCATCCATGGAAACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp TACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTCCCCAGCCTCCTGGCAGTaGGAGCATTTCATCTCTCTG +
Preference number: 4 (lower is better)
Translates to: YNIKNHIAWATYLTSPLSPASWQ*EHFISL
Trigger: CAGAGAGATGAAATGCTCCCACTGCCAGGAGGCTGG...GGAAAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp ATGGAAACAGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGGTCTCACCTTGTGCTTaGGGCACCTCACCGAGAAAT +
Preference number: 4 (lower is better)
Translates to: METAIPTSCIFLFLWCHQVSPCA*GTSPRN
Trigger: ATTTCTCGGTGAGGTGCCCCAAGCACAAGGTGAGAC...CTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCTGTTTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048966.7
CDS-3UTR TCA 90 bp TGGAAACAGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGTGGGCCATAGTCTaGAATGGAATCATGGGCTGC +
Preference number: 4 (lower is better)
Translates to: WKQPFQHLVSFFSCGVTSLWAIV*NGIMGC
Trigger: GCAGCCCATGATTCCATTTCAGACTATGGCCCACAA...ACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCTGTTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp CCCACATTGTCACTATGGAGATTGTGTCCATGGAAACAGCCATTCCAACATCTTAAGGGCAGAGTGCTGTaGTTGAAATTGGCTCACATG +
Preference number: 4 (lower is better)
Translates to: PTLSLWRLCPWKQPFQHLKGRVL*LKLAHM
Trigger: CATGTGAGCCAATTTCAAGCACAGCACTCTGCCCTT...AAGATGTTGGAATGGCTGTTTCCATGGACACAATCTCCATAGTGACAATGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp ATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTCCACTCTATGCATTGGTTGTAGATaGGATGAGCCAGAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: IKNHIAWATYLTSPLSTLCIGCR*DEPEAG
Trigger: GCCAGCCTCTGGCTCATCGCATCTACAACCAATGCA...TAGAGTGGAAAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp CCCACATTGTCACTATGGAGATTGTGTCCATGGAAACAGCCATTCCAACATCTTAATGGAATCATGGGCTaGTGCTCCAGGACTTGCATT +
Preference number: 4 (lower is better)
Translates to: PTLSLWRLCPWKQPFQHLNGIMG*CSRTCI
Trigger: AATGCAAGTCCTGGAGCAGCAGCCCATGATTCCATT...AAGATGTTGGAATGGCTGTTTCCATGGACACAATCTCCATAGTGACAATGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp TGGAAACAGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTCTCCCTGAGCAGAACTaGTGGCCCAGTCTTTATACT +
Preference number: 4 (lower is better)
Translates to: WKQPFQHLVSFFSCGVTSLPEQN*WPSLYT
Trigger: AGTATAAAGACTGGGCCAGCAGTTCTGCTCAGGGAG...ACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCTGTTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp GAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCAGTCAGCCTCAGCACTGTTTaGAGATGCACTCCTCCTAAT +
Preference number: 4 (lower is better)
Translates to: ETDSNQGKGGCHLSTLSVSLSTV*RCTPPN
Trigger: ATTAGGAGGAGTGCATCTGCAAACAGTGCTGAGGCT...GACTGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp GATCCAGGATACAGCCATGATGTTGGGGCATCTGCCAATTTCACCACTACCACCTGCTGCTGTTTCTTTTaGTTATTGACACTACCGATT +
Preference number: 4 (lower is better)
Translates to: DPGYSHDVGASANFTTTTCCCFF*LLTLPI
Trigger: AATCGGTAGTGTCAATAAGCAAAAGAAACAGCAGCA...GGTGGTAGTGGTGAAATTGGCAGATGCCCCAACATCATGGCTGTATCCTGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp TACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTCCCTGACTGAAACGCTGTaGAGAAGGGAAGGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: YNIKNHIAWATYLTSPLSLTETL*RREGGG
Trigger: TCCTCCTCCTTCCCTTCTCCACAGCGTTTCAGTCAG...GGAAAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp ATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTCCACTCTACCCCTGCTGGTTTCCTaGTGGAATCTTTGCCTGTTC +
Preference number: 4 (lower is better)
Translates to: IKNHIAWATYLTSPLSTLPLLVS*WNLCLF
Trigger: GAACAGGCAAAGATTCCACCAGGAAACCAGCAGGGG...TAGAGTGGAAAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp CAATACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTTTGCTCCCTCCTCCTaGAGGATCTGGCTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: QYNIKNHIAWATYLTSPLFAPSS*RIWLWK
Trigger: CTTCCACAGCCAGATCCTCCAGGAGGAGGGAGCAAA...AAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp GAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCAGTCCTCTTCAGAAGGCCCTaGAAGAGGCTTCTCAACATT +
Preference number: 4 (lower is better)
Translates to: ETDSNQGKGGCHLSTLSVLFRRP*KRLLNI
Trigger: AATGTTGAGAAGCCTCTTCCAGGGCCTTCTGAAGAG...GACTGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp CCCACATTGTCACTATGGAGATTGTGTCCATGGAAACAGCCATTCCAACATCTTCTCTTCAGAAGGCCCTaGAAGAGGCTTCTCAACATT +
Preference number: 4 (lower is better)
Translates to: PTLSLWRLCPWKQPFQHLLFRRP*KRLLNI
Trigger: AATGTTGAGAAGCCTCTTCCAGGGCCTTCTGAAGAG...AAGATGTTGGAATGGCTGTTTCCATGGACACAATCTCCATAGTGACAATGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp ATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGTGTGATACCCAGGGAACCATCTaGTCTCCCTTGGTTACCACC +
Preference number: 4 (lower is better)
Translates to: IPTSCIFLFLWCHQFECDTQGTI*SPLVTT
Trigger: GGTGGTAACCAAGGGAGACCAGATGGTTCCCTGGGT...ATCACACTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
3UTR CAA 72 bp GAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTaGTCTACTCTTTCAGTCCAGGGTCTAGTGTTCACT +
Preference number: 4 (lower is better)
Translates to: ETDSNQGKGGCH*STLSVQGLVFT
Trigger: AGTGAACACTAGACCCTGGACTGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp TGGAAACAGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTCTCACCCTCTCACCTTaGTCTTCTGAACTACTAGAG +
Preference number: 4 (lower is better)
Translates to: WKQPFQHLVSFFSCGVTSLTLSP*SSELLE
Trigger: CTCTAGTAGTTCAGAAGATCAAGGTGAGAGGGTGAG...ACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCTGTTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp GAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCAGTCGACTTAAACTTGGGTTaGGACGTTCATTCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: ETDSNQGKGGCHLSTLSVDLNLG*DVHSSQ
Trigger: TTGGGAGGAATGAACGTCTCAACCCAAGTTTAAGTC...GACTGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp ATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGTGTGATAGAGGCCAGGCTTTCTaGGTTGGGAGAAAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: IPTSCIFLFLWCHQFECDRGQAF*VGRKRS
Trigger: GCTCCTTTTTCTCCCAACTCAGAAAGCCTGGCCTCT...ATCACACTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp TACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTCCTTTGCTCTGCATTTCTaGGGACCTCTTAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: YNIKNHIAWATYLTSPLSFALHF*GPLRRW
Trigger: CCACCTCCTAAGAGGTCCTCAGAAATGCAGAGCAAA...GGAAAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp CAATACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTCTGGGCCTCTGCTCCTaGCTGGAGACATCTTCAATT +
Preference number: 4 (lower is better)
Translates to: QYNIKNHIAWATYLTSPLLGLCS*LETSSI
Trigger: AATTGAAGATGTCTCCAGGCAGGAGCAGAGGCCCAG...AAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp TGTGAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCATTGGCTGGAGAAGTCTaGCGAGAAAGATCCCAACAA +
Preference number: 4 (lower is better)
Translates to: CETDSNQGKGGCHLSTLSLAGEV*RERSQQ
Trigger: TTGTTGGGATCTTTCTCGGCAGACTTCTCCAGCCAA...TGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp CCCACATTGTCACTATGGAGATTGTGTCCATGGAAACAGCCATTCCAACATCTTGGACCCAAAATTCGTTaGTGTCAAGAGGTAGTTCAG +
Preference number: 4 (lower is better)
Translates to: PTLSLWRLCPWKQPFQHLGPKIR*CQEVVQ
Trigger: CTGAACTACCTCTTGACAGCAACGAATTTTGGGTCC...AAGATGTTGGAATGGCTGTTTCCATGGACACAATCTCCATAGTGACAATGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp CAATACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTAAATTCTGGAACATCTaGGCCTGGCGAGGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: QYNIKNHIAWATYLTSPLKFWNI*AWRGLN
Trigger: GTTCAGCCCTCGCCAGGCCCAGATGTTCCAGAATTT...AAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp CAATACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTCTGTCCAGTGGTTTGTaGCAGAGGCTGATGGGATTG +
Preference number: 4 (lower is better)
Translates to: QYNIKNHIAWATYLTSPLLSSGL*QRLMGL
Trigger: CAATCCCATCAGCCTCTGCCACAAACCACTGGACAG...AAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp CAATACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTGCTGCTGCCCCTGCTaGTTTCCTGGTGGAATCTTT +
Preference number: 4 (lower is better)
Translates to: QYNIKNHIAWATYLTSPLCCCPC*FPGGIF
Trigger: AAAGATTCCACCAGGAAACCAGCAGGGGCAGCAGCA...AAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp GAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCAGTCTTTGCAGAGGCATCTTaGTGGCAGCATTTGTGTACT +
Preference number: 4 (lower is better)
Translates to: ETDSNQGKGGCHLSTLSVFAEAS*WQHLCT
Trigger: AGTACACAAATGCTGCCACCAAGATGCCTCTGCAAA...GACTGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp TACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTCCTCTGGTGGAACTGCATaGGAGACCTTACAGGAACCT +
Preference number: 4 (lower is better)
Translates to: YNIKNHIAWATYLTSPLSSGGTA*ETLQEP
Trigger: AGGTTCCTGTAAGGTCTCCCATGCAGTTCCACCAGA...GGAAAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp TACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTCCGGGCTGAAATTCTGGTaGAACTGCATGGGAGACCTT +
Preference number: 4 (lower is better)
Translates to: YNIKNHIAWATYLTSPLSGLKFW*NCMGDL
Trigger: AAGGTCTCCCATGCAGTTCCACCAGAATTTCAGCCC...GGAAAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp ATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTCCACTCTAGGCCATAGTCTGAAATaGAATCATGGGCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: IKNHIAWATYLTSPLSTLGHSLK*NHGLLL
Trigger: GAGCAGCAGCCCATGATTCCATTTCAGACTATGGCC...TAGAGTGGAAAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp TGTGAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCAATACGTACCTACTGGTaGGCCATACATCATTCCGTC +
Preference number: 4 (lower is better)
Translates to: CETDSNQGKGGCHLSTLSIRTYW*AIHHSV
Trigger: GACGGAATGATGTATGGCCCACCAGTAGGTACGTAT...TGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp GAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCAGTCATGATACGTACCTACTaGTGGGCCATACATCATTCC +
Preference number: 4 (lower is better)
Translates to: ETDSNQGKGGCHLSTLSVMIRTY*WAIHHS
Trigger: GGAATGATGTATGGCCCACCAGTAGGTACGTATCAT...GACTGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp TGGAAACAGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTATCTGGCTCATGGGGTaGCCCATACCGTTTTTGATT +
Preference number: 4 (lower is better)
Translates to: WKQPFQHLVSFFSCGVTSIWLMG*PIPFLI
Trigger: AATCAAAAACGGTATGGGCCACCCCATGAGCCAGAT...ACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCTGTTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp CAATACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTGGACCTCTTAGGAGGTaGATTCTTCGGAAGAGTGGC +
Preference number: 4 (lower is better)
Translates to: QYNIKNHIAWATYLTSPLGPLRR*ILRKSG
Trigger: GCCACTCTTCCGAAGAATCCACCTCCTAAGAGGTCC...AAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp ATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGTGTGATTTTGTCCAGACTGACTaGAACGCTGTGGAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: IPTSCIFLFLWCHQFECDFVQTD*NAVEKG
Trigger: TCCCTTCTCCACAGCGTTTCAGTCAGTCTGGACAAA...ATCACACTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp TGGAAACAGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTGAAGTGATGTGTGGCTaGTTTCCTTTACGCCACTAT +
Preference number: 4 (lower is better)
Translates to: WKQPFQHLVSFFSCGVTSEVMCG*FPLRHY
Trigger: ATAGTGGCGTAAAGGAAATCAGCCACACATCACTTC...ACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCTGTTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp ATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGTGTGATTTGTGGGCCATAGTCTaGAATGGAATCATGGGCTGC +
Preference number: 4 (lower is better)
Translates to: IPTSCIFLFLWCHQFECDLWAIV*NGIMGC
Trigger: GCAGCCCATGATTCCATTTCAGACTATGGCCCACAA...ATCACACTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp ATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGTGTGATATGGGCACATTGCCTTaGCCACACTGGAGATTCTCA +
Preference number: 4 (lower is better)
Translates to: IPTSCIFLFLWCHQFECDMGTLP*PHWRFS
Trigger: TGAGAATCTCCAGTGTGGGCAAGGCAATGTGCCCAT...ATCACACTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp ATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGTGTGATAACTCATGGGCACATTaGCTTGCCCACACTGGAGAT +
Preference number: 4 (lower is better)
Translates to: IPTSCIFLFLWCHQFECDNSWAH*LAHTGD
Trigger: ATCTCCAGTGTGGGCAAGGCAATGTGCCCATGAGTT...ATCACACTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp ATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGTGTGATCTCCCTGAGCAGAACTaGTGGCCCAGTCTTTATACT +
Preference number: 4 (lower is better)
Translates to: IPTSCIFLFLWCHQFECDLPEQN*WPSLYT
Trigger: AGTATAAAGACTGGGCCAGCAGTTCTGCTCAGGGAG...ATCACACTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp ATGGAAACAGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTGTGCTTCAATTCCATaGTTTTGGCAGGCAGACCAT +
Preference number: 4 (lower is better)
Translates to: METAIPTSCIFLFLWCHQCASIP*FWQADH
Trigger: ATGGTCTGCCTGCCAAAAGCATGGAATTGAAGCACA...CTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCTGTTTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp ATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTCCACTCTATTGGCTGGAGAAGTCTaGCGAGAAAGATCCCAACAA +
Preference number: 4 (lower is better)
Translates to: IKNHIAWATYLTSPLSTLLAGEV*RERSQQ
Trigger: TTGTTGGGATCTTTCTCGGCAGACTTCTCCAGCCAA...TAGAGTGGAAAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp ATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTCCACTCTAGGTGGAGGTGGTTGCTaGTGCTGTTTCTTTTGCTTA +
Preference number: 4 (lower is better)
Translates to: IKNHIAWATYLTSPLSTLGGGGC*CCFFCL
Trigger: TAAGCAAAAGAAACAGCAGCAGCAACCACCTCCACC...TAGAGTGGAAAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp ATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTCCACTCTAAGACAGCAAACCAGGTaGCCCATAACAGAAGACTCT +
Preference number: 4 (lower is better)
Translates to: IKNHIAWATYLTSPLSTLRQQTR*PITEDS
Trigger: AGAGTCTTCTGTTATGGGGCACCTGGTTTGCTGTCT...TAGAGTGGAAAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp CAATACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTAAACAGTCTTTTCACTaGTGCCCTCCGTGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: QYNIKNHIAWATYLTSPLKQSFH*CPPWLL
Trigger: AAGCAGCCACGGAGGGCAGCAGTGAAAAGACTGTTT...AAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp ATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGTGTGATGCAGAGGCATCTTGGTaGCAGCATTTGTGTACTGCA +
Preference number: 4 (lower is better)
Translates to: IPTSCIFLFLWCHQFECDAEASW*QHLCTA
Trigger: TGCAGTACACAAATGCTGCCACCAAGATGCCTCTGC...ATCACACTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp ATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGTGTGATTCTGGTGGAACTGCATaGGAGACCTTACAGGAACCT +
Preference number: 4 (lower is better)
Translates to: IPTSCIFLFLWCHQFECDSGGTA*ETLQEP
Trigger: AGGTTCCTGTAAGGTCTCCCATGCAGTTCCACCAGA...ATCACACTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp TACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTCCATAGGGCTGAAATTCTaGTGGAACTGCATGGGAGAC +
Preference number: 4 (lower is better)
Translates to: YNIKNHIAWATYLTSPLSIGLKF*WNCMGD
Trigger: GTCTCCCATGCAGTTCCACCAGAATTTCAGCCCTAT...GGAAAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp ATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGTGTGATGCAGGATCATCCTCCTaGGAGCCTTTATCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: IPTSCIFLFLWCHQFECDAGSSS*EPLSCP
Trigger: TGGACAAGATAAAGGCTCCCAGGAGGATGATCCTGC...ATCACACTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp GAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCAGTCCTATCTCAAACTTCCTaGGAATGGGATAGTCAGACA +
Preference number: 4 (lower is better)
Translates to: ETDSNQGKGGCHLSTLSVLSQTS*EWDSQT
Trigger: TGTCTGACTATCCCATTCCCAGGAAGTTTGAGATAG...GACTGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp CCCACATTGTCACTATGGAGATTGTGTCCATGGAAACAGCCATTCCAACATCTTTCAATTTTGTTTCCATaGACACCAACCCACCAGGAA +
Preference number: 4 (lower is better)
Translates to: PTLSLWRLCPWKQPFQHLSILFP*TPTHQE
Trigger: TTCCTGGTGGGTTGGTGTCCATGGAAACAAAATTGA...AAGATGTTGGAATGGCTGTTTCCATGGACACAATCTCCATAGTGACAATGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp ATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTCCACTCTACTGGTAGGATGGCAGTaGTCTCCAGATTTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: IKNHIAWATYLTSPLSTLLVGWQ*SPDFLL
Trigger: CAACAAGAAATCTGGAGACCACTGCCATCCTACCAG...TAGAGTGGAAAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp ATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTCCACTCTAGCCTCTGCTCCTGCCTaGAGACATCTTCAATTTTTC +
Preference number: 4 (lower is better)
Translates to: IKNHIAWATYLTSPLSTLASAPA*RHLQFF
Trigger: GAAAAATTGAAGATGTCTCCAGGCAGGAGCAGAGGC...TAGAGTGGAAAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp TGTGAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCACCAGGCTTTCTGAGTTaGGAGAAAAAGGAGCATGTA +
Preference number: 4 (lower is better)
Translates to: CETDSNQGKGGCHLSTLSPGFLS*EKKEHV
Trigger: TACATGCTCCTTTTTCTCCCAACTCAGAAAGCCTGG...TGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp CAATACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTCCTTCTTTTGATGGGTaGAGGAGGCGCCCTTTATCA +
Preference number: 4 (lower is better)
Translates to: QYNIKNHIAWATYLTSPLPSFDG*RRRPLS
Trigger: TGATAAAGGGCGCCTCCTCCACCCATCAAAAGAAGG...AAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp TGTGAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCAGATTCTTCGGAAGAGTaGCTGCATAATCTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: CETDSNQGKGGCHLSTLSDSSEE*LHNLGD
Trigger: ATCCCCAAGATTATGCAGCCACTCTTCCGAAGAATC...TGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp CAATACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTCTCCAGCTTCTTTCCTaGAACCCTGATAGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: QYNIKNHIAWATYLTSPLLQLLS*NPDSLD
Trigger: ATCAAGGCTATCAGGGTTTCAGGAAAGAAGCTGGAG...AAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp TACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTCCTTATGCCCTTCATACTaGGATCCAGCATTCACACTG +
Preference number: 4 (lower is better)
Translates to: YNIKNHIAWATYLTSPLSLCPSY*DPAFTL
Trigger: CAGTGTGAATGCTGGATCTCAGTATGAAGGGCATAA...GGAAAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp ATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTCCACTCTAACCCACCAGGAAGAATaGCTGACTGACTTAAACTTG +
Preference number: 4 (lower is better)
Translates to: IKNHIAWATYLTSPLSTLTHQEE*LTDLNL
Trigger: CAAGTTTAAGTCAGTCAGTCATTCTTCCTGGTGGGT...TAGAGTGGAAAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp CAATACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTGGCCCATACCGTTTTTaGTTAGACATTCCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: QYNIKNHIAWATYLTSPLGPYRF*LDIPGG
Trigger: TCCTCCAGGAATGTCTAATCAAAAACGGTATGGGCC...AAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp TGGAAACAGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTGTTTCTTTTGCTTATTaGCACTACCGATTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: WKQPFQHLVSFFSCGVTSVSFAY*HYRLVS
Trigger: GGAGACCAATCGGTAGTGTCAATAAGCAAAAGAAAC...ACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCTGTTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp TACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTCCAGAGGGCTTTGTGTCTaGAACAGTCTTTTCACTGCT +
Preference number: 4 (lower is better)
Translates to: YNIKNHIAWATYLTSPLSRGLCV*NSLFTA
Trigger: AGCAGTGAAAAGACTGTTTCAGACACAAAGCCCTCT...GGAAAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp ATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGTGTGATACTACTACCACCACCTaGTCCCCCAAAATTCTGGAA +
Preference number: 4 (lower is better)
Translates to: IPTSCIFLFLWCHQFECDTTTTT*SPKILE
Trigger: TTCCAGAATTTTGGGGGAGCAGGTGGTGGTAGTAGT...ATCACACTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp GAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCAGTCTGTGTCTTTGTTGCCTaGCATGTAGTAAAAATCTCC +
Preference number: 4 (lower is better)
Translates to: ETDSNQGKGGCHLSTLSVCVFVA*HVVKIS
Trigger: GGAGATTTTTACTACATGGCAGGCAACAAAGACACA...GACTGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp CAATACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTCCCTTGATGTTCCTGTaGGCTTCTAGGATACCTTCT +
Preference number: 4 (lower is better)
Translates to: QYNIKNHIAWATYLTSPLPLMFL*ASRIPS
Trigger: AGAAGGTATCCTAGAAGCGCACAGGAACATCAAGGG...AAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp CAATACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTTTCAGGAGCTGTGCTaGTTGACTTCCTTTCCCATG +
Preference number: 4 (lower is better)
Translates to: QYNIKNHIAWATYLTSPLFQELC*LTSFPM
Trigger: CATGGGAAAGGAAGTCAAGCAGCACAGCTCCTGAAA...AAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp CAATACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTCTCCAGGACTTGCATTaGCACGGTAAGTCTCATGTT +
Preference number: 4 (lower is better)
Translates to: QYNIKNHIAWATYLTSPLLQDLH*HGKSHV
Trigger: AACATGAGACTTACCGTGGCAATGCAAGTCCTGGAG...AAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp TGGAAACAGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTCTTCGGAAGAGTGGCTaGATAATCTTGGGGATAAAA +
Preference number: 4 (lower is better)
Translates to: WKQPFQHLVSFFSCGVTSLRKSG*IILGIK
Trigger: TTTTATCCCCAAGATTATGCAGCCACTCTTCCGAAG...ACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCTGTTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp ATGGAAACAGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGGTAAAATTCGGTTTCTaGAACTCATGGGCACATTGC +
Preference number: 4 (lower is better)
Translates to: METAIPTSCIFLFLWCHQVKFGF*NSWAHC
Trigger: GCAATGTGCCCATGAGTTCCAGAAACCGAATTTTAC...CTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCTGTTTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp ATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTCCACTCTAGGAGTTGGACTGAGCTaGGGCATTAGCTGTAAAATT +
Preference number: 4 (lower is better)
Translates to: IKNHIAWATYLTSPLSTLGVGLS*GISCKI
Trigger: AATTTTACAGCTAATGCCCCAGCTCAGTCCAACTCC...TAGAGTGGAAAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp ATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTCCACTCTATGTGGAAGTGATGTGTaGCTGATTTCCTTTACGCCA +
Preference number: 4 (lower is better)
Translates to: IKNHIAWATYLTSPLSTLCGSDV*LISFTP
Trigger: TGGCGTAAAGGAAATCAGCCACACATCACTTCCACA...TAGAGTGGAAAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp ATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGTGTGATCTGGTAGGATGGCAGTaGTCTCCAGATTTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: IPTSCIFLFLWCHQFECDLVGWQ*SPDFLL
Trigger: CAACAAGAAATCTGGAGACCACTGCCATCCTACCAG...ATCACACTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp TGGAAACAGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTGTAAAGAACTCCTATTaGCCCTCTCTGAAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: WKQPFQHLVSFFSCGVTSVKNSY*PSLKRS
Trigger: TGACCTTTTCAGAGAGGGCCAATAGGAGTTCTTTAC...ACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCTGTTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp ATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGTGTGATATACGTACCTACTGGTaGGCCATACATCATTCCGTC +
Preference number: 4 (lower is better)
Translates to: IPTSCIFLFLWCHQFECDIRTYW*AIHHSV
Trigger: GACGGAATGATGTATGGCCCACCAGTAGGTACGTAT...ATCACACTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp TGTGAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCAACAGTTTCTATTGTCTaGGTTTGGAAGGTCCTTGGA +
Preference number: 4 (lower is better)
Translates to: CETDSNQGKGGCHLSTLSTVSIV*VWKVLG
Trigger: TCCAAGGACCTTCCAAACCCAGACAATAGAAACTGT...TGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp GAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCAGTCTCAACATTCGATTCCTaGTTAGTTACACTGACTAGG +
Preference number: 4 (lower is better)
Translates to: ETDSNQGKGGCHLSTLSVSTFDS*LVTLTR
Trigger: CCTAGTCAGTGTAACTAACCAGGAATCGAATGTTGA...GACTGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp CAATACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTGCGTCAATGGCACATaGGTAATGGTATCGGAAGGA +
Preference number: 4 (lower is better)
Translates to: QYNIKNHIAWATYLTSPLCVNGT*VMVSEG
Trigger: TCCTTCCGATACCATTACCCATGTGCCATTGACGCA...AAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp TACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTCCGGAAGAATGACTGACTaGCTTAAACTTGGGTTGAGA +
Preference number: 4 (lower is better)
Translates to: YNIKNHIAWATYLTSPLSGRMTD*LKLGLR
Trigger: TCTCAACCCAAGTTTAAGTCAGTCAGTCATTCTTCC...GGAAAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp CAATACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTGACTCTTGTAACTTCTaGGAGCTGTGCTTCAATTCC +
Preference number: 4 (lower is better)
Translates to: QYNIKNHIAWATYLTSPLDSCNF*ELCFNS
Trigger: GGAATTGAAGCACAGCTCTCAGAAGTTACAAGAGTC...AAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp TGGAAACAGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTCCACTGTGTCTTTGTTaGCTGCCATGTAGTAAAAAT +
Preference number: 4 (lower is better)
Translates to: WKQPFQHLVSFFSCGVTSPLCLC*LPCSKN
Trigger: ATTTTTACTACATGGCAGGCAACAAAGACACAGTGG...ACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCTGTTTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp ATGGAAACAGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGCCACTGTGTCTTTGTTaGCTGCCATGTAGTAAAAAT +
Preference number: 4 (lower is better)
Translates to: METAIPTSCIFLFLWCHQPLCLC*LPCSKN
Trigger: ATTTTTACTACATGGCAGGCAACAAAGACACAGTGG...CTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCTGTTTCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp ATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGTGTGATGGAGGTGGTTGCTGCTaGTGTTTCTTTTGCTTATTG +
Preference number: 4 (lower is better)
Translates to: IPTSCIFLFLWCHQFECDGGGCC*CFFCLL
Trigger: CAATAAGCAAAAGAAACAGCAGCAGCAACCACCTCC...ATCACACTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp ATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTCCACTCTACTATCTCAAACTTCCTaGGAATGGGATAGTCAGACA +
Preference number: 4 (lower is better)
Translates to: IKNHIAWATYLTSPLSTLLSQTS*EWDSQT
Trigger: TGTCTGACTATCCCATTCCCAGGAAGTTTGAGATAG...TAGAGTGGAAAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp ATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGTGTGATGGCTCCTCACCAATTTaGTCTGTTCTTCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: IPTSCIFLFLWCHQFECDGSSPI*SVLLLQ
Trigger: CTGAAGAAGAAGAACAGACCAAATTGGTGAGGAGCC...ATCACACTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp ATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGTGTGATGGAAGAATGACTGACTaGCTTAAACTTGGGTTGAGA +
Preference number: 4 (lower is better)
Translates to: IPTSCIFLFLWCHQFECDGRMTD*LKLGLR
Trigger: TCTCAACCCAAGTTTAAGTCAGTCAGTCATTCTTCC...ATCACACTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp ATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGTGTGATGTTTCTTTTGCTTATTaGCACTACCGATTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: IPTSCIFLFLWCHQFECDVSFAY*HYRLVS
Trigger: GGAGACCAATCGGTAGTGTCAATAAGCAAAAGAAAC...ATCACACTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp CAATACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTCATTCACACTGTAACTaGCATCATAGCTTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: QYNIKNHIAWATYLTSPLHSHCN*HHSFVQ
Trigger: CTGGACAAAGCTATGATGGCAGTTACAGTGTGAATG...AAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp CCCACATTGTCACTATGGAGATTGTGTCCATGGAAACAGCCATTCCAACATCTTCATCTTCAATTTTTCTaGAAAGTCATGGTACTGAGA +
Preference number: 4 (lower is better)
Translates to: PTLSLWRLCPWKQPFQHLHLQFF*KVMVLR
Trigger: TCTCAGTACCATGACTTTGCAGAAAAATTGAAGATG...AAGATGTTGGAATGGCTGTTTCCATGGACACAATCTCCATAGTGACAATGTGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp ATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTCCACTCTATTATACTCCTCTTGTTaGTGTTGGTACATCTGTCTC +
Preference number: 4 (lower is better)
Translates to: IKNHIAWATYLTSPLSTLLYSSC*CWYICL
Trigger: GAGACAGATGTACCAACAGCAACAAGAGGAGTATAA...TAGAGTGGAAAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp ATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGTGTGATTCAATTTTGTTTCCATaGACACCAACCCACCAGGAA +
Preference number: 4 (lower is better)
Translates to: IPTSCIFLFLWCHQFECDSILFP*TPTHQE
Trigger: TTCCTGGTGGGTTGGTGTCCATGGAAACAAAATTGA...ATCACACTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp ATGGAAACAGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGACTCCTCCTAATATTTaGAGATGTGATCTTCTGAAC +
Preference number: 4 (lower is better)
Translates to: METAIPTSCIFLFLWCHQTPPNI*RCDLLN
Trigger: GTTCAGAAGATCACATCTCCAAATATTAGGAGGAGT...CTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCTGTTTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp CAATACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTAGAATACAACCCTCATaGACCCAAAATTCGTTGCTG +
Preference number: 4 (lower is better)
Translates to: QYNIKNHIAWATYLTSPLRIQPS*TQNSLL
Trigger: CAGCAACGAATTTTGGGTCCATGAGGGTTGTATTCT...AAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR TCA 90 bp CAATACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTGTTTGGGTGAAATCATaGCTGTATCGTTCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: QYNIKNHIAWATYLTSPLVWVKS*LYRSLS
Trigger: AGAAAGAGAACGATACAGTCATGATTTCACCCAAAC...AAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR GCA 90 bp CAATACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTGTGTCTTTGTTGCCTaGCATGTAGTAAAAATCTCC +
Preference number: 4 (lower is better)
Translates to: QYNIKNHIAWATYLTSPLCVFVA*HVVKIS
Trigger: GGAGATTTTTACTACATGGCAGGCAACAAAGACACA...AAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp TGTGAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCATTTATCTGTCCACTCTaGGATTTCAATTTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: CETDSNQGKGGCHLSTLSFICPL*DFNFVS
Trigger: GGAAACAAAATTGAAATCCCAGAGTGGACAGATAAA...TGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp ATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTCCACTCTAACTCCTCCTAATATTTaGAGATGTGATCTTCTGAAC +
Preference number: 4 (lower is better)
Translates to: IKNHIAWATYLTSPLSTLTPPNI*RCDLLN
Trigger: GTTCAGAAGATCACATCTCCAAATATTAGGAGGAGT...TAGAGTGGAAAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CCA 90 bp CAATACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTTTATCTGTCCACTCTaGGATTTCAATTTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: QYNIKNHIAWATYLTSPLFICPL*DFNFVS
Trigger: GGAAACAAAATTGAAATCCCAGAGTGGACAGATAAA...AAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTATTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS TCA 90 bp AGGGAGCCCCCTGGACAGGGACCGAGGACCTCCACCACAGTCTTCTaGGCGGTGGCGCCGCTTGAACCTAGGATGAGCAGCCAGGCTCCT +
Preference number: 5 (lower is better)
Translates to: REPPGQGPRTSTTVF*AVAPLEPRMSSQAP
Trigger: AGGAGCCTGGCTGCTCATCCTAGGTTCAAGCGGCGCCACCGCTCAGAAGACTGTGGTGGAGGTCCTCGGTCCCTGTCCAGGGGGCTCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS GCA 90 bp GGGGGCTCCGTACTCTGTCAAGAAACTGCTGCTGCCTTGGGCTCTTaGGTGGGCCTTCCTGCCTATGCTGCGCAGCAGCGATCACTCCCT +
Preference number: 5 (lower is better)
Translates to: GGSVLCQETAAALGS*VGLPAYAAQQRSLP
Trigger: AGGGAGTGATCGCTGCTGCGCAGCATAGGCAGGAAGGCCCACGCAAGAGCCCAAGGCAGCAGCAGTTTCTTGACAGAGTACGGAGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS GCA 90 bp CTGATAGCCTTGATGGCCAGAGGTCTCACTAGCCATTGCTGCCGCTaGAGCAGCTGTTCCTCGTCGACCGCTACTGCTGCTGCCAGTGCC +
Preference number: 5 (lower is better)
Translates to: LIALMARGLTSHCCR*SSCSSSTATAAASA
Trigger: GGCACTGGCAGCAGCAGTAGCGGTCGACGAGGAACAGCTGCTGCAGCGGCAGCAATGGCTAGTGAGACCTCTGGCCATCAAGGCTATCAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
ENSMUST00000229547.2
ENSMUST00000230403.2
CDS CCA 90 bp GCTCCGTACTCTGTCAAGAAACTGCTGCTGCCTTGGGCTCTTGCGTaGGCCTTCCTGCCTATGCTGCGCAGCAGCGATCACTCCCTGAGC +
Preference number: 5 (lower is better)
Translates to: APYSVKKLLLPWALA*AFLPMLRSSDHSLS
Trigger: GCTCAGGGAGTGATCGCTGCTGCGCAGCATAGGCAGGAAGGCCCACGCAAGAGCCCAAGGCAGCAGCAGTTTCTTGACAGAGTACGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp GCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTGCTAGAGGCCTGCTGTaGATACTGAGCACTCCCAGG +
Preference number: 5 (lower is better)
Translates to: AEAWASMVSMDAVGPHKGARGLL*ILSTPR
Trigger: CCTGGGAGTGCTCAGTATCAACAGCAGGCCTCTAGC...ACCCTTGTGGGGACCCACAGCATCCATGGAAACCATGGAGGCCCAGGCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp GCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTGGAACCTCAGGCTGGTaGTACTGCCCAACCTGGCTT +
Preference number: 5 (lower is better)
Translates to: AEAWASMVSMDAVGPHKGGTSGW*YCPTWL
Trigger: AAGCCAGGTTGGGCAGTACAACCAGCCTGAGGTTCC...ACCCTTGTGGGGACCCACAGCATCCATGGAAACCATGGAGGCCCAGGCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS GCA 90 bp TTGCTGCCGCTGCAGCAGCTGTTCCTCGTCGACCGCTACTGCTGCTaGCAGTGCCACTACTACCACCACCTGCTCCCCCAAAATTCTGGA +
Preference number: 5 (lower is better)
Translates to: LLPLQQLFLVDRYCC*QCHYYHHLLPQNSG
Trigger: TCCAGAATTTTGGGGGAGCAGGTGGTGGTAGTAGTGGCACTGGCAGCAGCAGTAGCGGTCGACGAGGAACAGCTGCTGCAGCGGCAGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
ENSMUST00000229547.2
ENSMUST00000230403.2
CDS GCA 90 bp CCATTGCTGCCGCTGCAGCAGCTGTTCCTCGTCGACCGCTACTGCTaGTGCCAGTGCCACTACTACCACCACCTGCTCCCCCAAAATTCT +
Preference number: 5 (lower is better)
Translates to: PLLPLQQLFLVDRYC*CQCHYYHHLLPQNS
Trigger: AGAATTTTGGGGGAGCAGGTGGTGGTAGTAGTGGCACTGGCAGCAGCAGTAGCGGTCGACGAGGAACAGCTGCTGCAGCGGCAGCAATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
ENSMUST00000229547.2
ENSMUST00000230403.2
CDS GCA 90 bp GAAACCCTGATAGCCTTGATGGCCAGAGGTCTCACTAGCCATTGCTaGCGCTGCAGCAGCTGTTCCTCGTCGACCGCTACTGCTGCTGCC +
Preference number: 5 (lower is better)
Translates to: ETLIALMARGLTSHC*RCSSCSSSTATAAA
Trigger: GGCAGCAGCAGTAGCGGTCGACGAGGAACAGCTGCTGCAGCGGCAGCAATGGCTAGTGAGACCTCTGGCCATCAAGGCTATCAGGGTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
ENSMUST00000229547.2
ENSMUST00000230403.2
CDS-3UTR CAA 90 bp CAGGGCAGAGTGGGGTGTGGTTGCACAGCAGGAGGATTCCATTCCGTCACGTGTCAGGGACCCGCCGCATaGGTGTGGACCTGCTATCTT +
Preference number: 5 (lower is better)
Translates to: QGRVGCGCTAGGFHSVTCQGPAA*VWTCYL
Trigger: AAGATAGCAGGTCCACACCAATGCGGCGGGTCCCTG...ACACGTGACGGAATGGAATCCTCCTGCTGTGCAACCACACCCCACTCTGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS TCA 90 bp CTGGAACATCTGGGCCTGGCGAGGGCTGAACTCTTCTATGCGGGATaGGCTGTGCACCTCCTGTGGGTAGCTCTGCTGGTTTCCGTGGTA +
Preference number: 5 (lower is better)
Translates to: LEHLGLARAELFYAG*AVHLLWVALLVSVV
Trigger: TACCACGGAAACCAGCAGAGCTACCCACAGGAGGTGCACAGCTCATCCCGCATAGAAGAGTTCAGCCCTCGCCAGGCCCAGATGTTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
ENSMUST00000229439.2
ENSMUST00000229547.2
ENSMUST00000230403.2
CDS TCA 90 bp CACCTGCTCCCCCAAAATTCTGGAACATCTGGGCCTGGCGAGGGCTaGACTCTTCTATGCGGGATGAGCTGTGCACCTCCTGTGGGTAGC +
Preference number: 5 (lower is better)
Translates to: HLLPQNSGTSGPGEG*TLLCGMSCAPPVGS
Trigger: GCTACCCACAGGAGGTGCACAGCTCATCCCGCATAGAAGAGTTCAGCCCTCGCCAGGCCCAGATGTTCCAGAATTTTGGGGGAGCAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
ENSMUST00000229547.2
ENSMUST00000230403.2
CDS GCA 90 bp CCGCTGCAGCAGCTGTTCCTCGTCGACCGCTACTGCTGCTGCCAGTaGCACTACTACCACCACCTGCTCCCCCAAAATTCTGGAACATCT +
Preference number: 5 (lower is better)
Translates to: PLQQLFLVDRYCCCQ*HYYHHLLPQNSGTS
Trigger: AGATGTTCCAGAATTTTGGGGGAGCAGGTGGTGGTAGTAGTGGCACTGGCAGCAGCAGTAGCGGTCGACGAGGAACAGCTGCTGCAGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
ENSMUST00000229547.2
ENSMUST00000230403.2
CDS GCA 90 bp CCTGAAACCCTGATAGCCTTGATGGCCAGAGGTCTCACTAGCCATTaGTGCCGCTGCAGCAGCTGTTCCTCGTCGACCGCTACTGCTGCT +
Preference number: 5 (lower is better)
Translates to: PETLIALMARGLTSH*CRCSSCSSSTATAA
Trigger: AGCAGCAGTAGCGGTCGACGAGGAACAGCTGCTGCAGCGGCAGCAATGGCTAGTGAGACCTCTGGCCATCAAGGCTATCAGGGTTTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
ENSMUST00000229547.2
ENSMUST00000230403.2
CDS GCA 90 bp CCAGCAGAAGATGGCAGAGTTGAGGGCCGCTGCATTGGTTGTAGATaGGATGAGCCAGAGGCTGGCTGTCCAGTGGTTTGTGGCAGAGGC +
Preference number: 5 (lower is better)
Translates to: PAEDGRVEGRCIGCR*DEPEAGCPVVCGRG
Trigger: GCCTCTGCCACAAACCACTGGACAGCCAGCCTCTGGCTCATCGCATCTACAACCAATGCAGCGGCCCTCAACTCTGCCATCTTCTGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp TCACGCCACAGTTCTCTCCTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTGCCCAACCTGGCTTaGCAGAGGCATCTTGGTGGC +
Preference number: 5 (lower is better)
Translates to: SRHSSLLDSACFSSRGLGLPNLA*QRHLGG
Trigger: GCCACCAAGATGCCTCTGCAAAGCCAGGTTGGGCAG...GCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAGGAGAGAACTGTGGCGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp AGAGTGGGGTGTGGTTGCACAGCAGGAGGATTCCATTCCGTCACGTGTGTCCTCAGGGGAGGCTTGTGCTaGGGGCACCTCACCGAGAAA +
Preference number: 5 (lower is better)
Translates to: RVGCGCTAGGFHSVTCVLRGGLC*GHLTEK
Trigger: TTTCTCGGTGAGGTGCCCCAAGCACAAGCCTCCCCT...GAGGACACACGTGACGGAATGGAATCCTCCTGCTGTGCAACCACACCCCACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000109510.10
CDS GCA 90 bp CCCGGCTACCAACTCTACCAGGGACCCGCCGCATTGGTGTGGACCTaGTATCTTGTGGGCCATAGTCTGAAATGGAATCATGGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: PGYQLYQGPAALVWT*YLVGHSLKWNHGLL
Trigger: CAGCAGCCCATGATTCCATTTCAGACTATGGCCCACAAGATAGCAGGTCCACACCAATGCGGCGGGTCCCTGGTAGAGTTGGTAGCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CCA 90 bp CTACTACCACCACCTGCTCCCCCAAAATTCTGGAACATCTGGGCCTaGCGAGGGCTGAACTCTTCTATGCGGGATGAGCTGTGCACCTCC +
Preference number: 5 (lower is better)
Translates to: LLPPPAPPKFWNIWA*RGLNSSMRDELCTS
Trigger: GGAGGTGCACAGCTCATCCCGCATAGAAGAGTTCAGCCCTCGCCAGGCCCAGATGTTCCAGAATTTTGGGGGAGCAGGTGGTGGTAGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
ENSMUST00000229547.2
ENSMUST00000230403.2
CDS CCA 90 bp ATTTTTCAGGGGGCTCCGTACTCTGTCAAGAAACTGCTGCTGCCTTaGGCTCTTGCGTGGGCCTTCCTGCCTATGCTGCGCAGCAGCGAT +
Preference number: 5 (lower is better)
Translates to: IFQGAPYSVKKLLLP*ALAWAFLPMLRSSD
Trigger: ATCGCTGCTGCGCAGCATAGGCAGGAAGGCCCACGCAAGAGCCCAAGGCAGCAGCAGTTTCTTGACAGAGTACGGAGCCCCCTGAAAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp GCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTAGGGATCCAATACTCTaGTTCAGAAGGCCCCTGCTA +
Preference number: 5 (lower is better)
Translates to: AEAWASMVSMDAVGPHKGRDPIL*FRRPLL
Trigger: TAGCAGGGGCCTTCTGAACAAGAGTATTGGATCCCT...ACCCTTGTGGGGACCCACAGCATCCATGGAAACCATGGAGGCCCAGGCCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp AGAGTGGGGTGTGGTTGCACAGCAGGAGGATTCCATTCCGTCACGTGTGTCCTCGCCTCTGTCTTGACTTaGTCATCCCCACTGCCACGC +
Preference number: 5 (lower is better)
Translates to: RVGCGCTAGGFHSVTCVLASVLT*SSPLPR
Trigger: GCGTGGCAGTGGGGATGACAAAGTCAAGACAGAGGC...GAGGACACACGTGACGGAATGGAATCCTCCTGCTGTGCAACCACACCCCACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS TCA 90 bp TCGTCCCTAGTTGCAGGACTGGTACTGAGCCTAGGGGCCTCATTCTaGGCACCTTGTGTTGGTGAGGAGCCAGCTTTCTCTGAAGCGCCA +
Preference number: 5 (lower is better)
Translates to: SSLVAGLVLSLGASF*APCVGEEPAFSEAP
Trigger: TGGCGCTTCAGAGAAAGCTGGCTCCTCACCAACACAAGGTGCTCAGAATGAGGCCCCTAGGCTCAGTACCAGTCCTGCAACTAGGGACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS TCA 90 bp GACCCGCCGCATTGGTGTGGACCTGCTATCTTGTGGGCCATAGTCTaGAATGGAATCATGGGCTGCTGCTCCAGGACTTGCATTGCCACG +
Preference number: 5 (lower is better)
Translates to: DPPHWCGPAILWAIV*NGIMGCCSRTCIAT
Trigger: CGTGGCAATGCAAGTCCTGGAGCAGCAGCCCATGATTCCATTTCAGACTATGGCCCACAAGATAGCAGGTCCACACCAATGCGGCGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS TCA 90 bp TTGCGTGGGCCTTCCTGCCTATGCTGCGCAGCAGCGATCACTCCCTaGGCAGAACTGCTGGCCCAGTCTTTATACTCCTCTTGTTGCTGT +
Preference number: 5 (lower is better)
Translates to: LRGPSCLCCAAAITP*AELLAQSLYSSCCC
Trigger: ACAGCAACAAGAGGAGTATAAAGACTGGGCCAGCAGTTCTGCTCAGGGAGTGATCGCTGCTGCGCAGCATAGGCAGGAAGGCCCACGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS GCA 90 bp GAAATTGGCTCACATGACCCTCACTCGCATACTGATTGCCAAAGCTaGTCCCCTGGGGAGGTCCATAGCTCTGTACAGGCCCAGAAGGCC +
Preference number: 5 (lower is better)
Translates to: EIGSHDPHSHTDCQS*SPGEVHSSVQAQKA
Trigger: GGCCTTCTGGGCCTGTACAGAGCTATGGACCTCCCCAGGGGAGCAGCTTTGGCAATCAGTATGCGAGTGAGGGTCATGTGAGCCAATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
ENSMUST00000229547.2
CDS GCA 90 bp AGGAGACTTGCTAGGCTCAGTCCTGCCTGTGAAACTTGGGCCTACTaGGGAGTGGCTACTCGGGCCATTCCCCTCTCCATTGTGGTTAGA +
Preference number: 5 (lower is better)
Translates to: RRLARLSPACETWAY*GVATRAIPLSIVVR
Trigger: TCTAACCACAATGGAGAGGGGAATGGCCCGAGTAGCCACTCCGCAGTAGGCCCAAGTTTCACAGGCAGGACTGAGCCTAGCAAGTCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS GCA 90 bp TTGTCATTTTTCAGGGGGCTCCGTACTCTGTCAAGAAACTGCTGCTaGCTTGGGCTCTTGCGTGGGCCTTCCTGCCTATGCTGCGCAGCA +
Preference number: 5 (lower is better)
Translates to: LSFFRGLRTLSRNCC*LGLLRGPSCLCCAA
Trigger: TGCTGCGCAGCATAGGCAGGAAGGCCCACGCAAGAGCCCAAGGCAGCAGCAGTTTCTTGACAGAGTACGGAGCCCCCTGAAAAATGACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS GCA 90 bp CCGTCTTTGTCATTTTTCAGGGGGCTCCGTACTCTGTCAAGAAACTaGTGCTGCCTTGGGCTCTTGCGTGGGCCTTCCTGCCTATGCTGC +
Preference number: 5 (lower is better)
Translates to: PSLSFFRGLRTLSRN*CCLGLLRGPSCLCC
Trigger: GCAGCATAGGCAGGAAGGCCCACGCAAGAGCCCAAGGCAGCAGCAGTTTCTTGACAGAGTACGGAGCCCCCTGAAAAATGACAAAGACGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CCA 90 bp CAAACTTCCAGGAGACTTGCTAGGCTCAGTCCTGCCTGTGAAACTTaGGCCTACTGCGGAGTGGCTACTCGGGCCATTCCCCTCTCCATT +
Preference number: 5 (lower is better)
Translates to: QTSRRLARLSPACET*AYCGVATRAIPLSI
Trigger: AATGGAGAGGGGAATGGCCCGAGTAGCCACTCCGCAGTAGGCCCAAGTTTCACAGGCAGGACTGAGCCTAGCAAGTCTCCTGGAAGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp CAGGGCAGAGTGGGGTGTGGTTGCACAGCAGGAGGATTCCATTCCGTCACGTGTTCCGTGGTAACTGCTTaGCTCCCGAAACGACTGCAT +
Preference number: 5 (lower is better)
Translates to: QGRVGCGCTAGGFHSVTCSVVTA*LPKRLH
Trigger: ATGCAGTCGTTTCGGGAGCAAAGCAGTTACCACGGA...ACACGTGACGGAATGGAATCCTCCTGCTGTGCAACCACACCCCACTCTGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp AGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGTTGCTGCGGCTGCTGTaGCTGAGGTTGTGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: RLCLFQQQRPGPPWFPWMLLRLL*LRLWLL
Trigger: CAGCAACCACAACCTCAGCAACAGCAGCCGCAGCAA...CATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp GACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCGCCACTAGCCATCCCTaGATGTTCCTGTGCGCTTCT +
Preference number: 5 (lower is better)
Translates to: DSACFSSRGLGLHGFHGCATSHP*MFLCAS
Trigger: AGAAGCGCACAGGAACATCAAGGGATGGCTAGTGGC...GCATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp GGGGCCACAGTGATCCAGGATACAGCCATGATGTTGGGGCATCTGCCAATTTCAGAAACTGCTGCTGCCTaGGGCTCTTGCGTGGGCCTT +
Preference number: 5 (lower is better)
Translates to: GATVIQDTAMMLGHLPISETAAA*GSCVGL
Trigger: AAGGCCCACGCAAGAGCCCAAGGCAGCAGCAGTTTC...TGAAATTGGCAGATGCCCCAACATCATGGCTGTATCCTGGATCACTGTGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp AGAGTGGGGTGTGGTTGCACAGCAGGAGGATTCCATTCCGTCACGTGTGTCCTCCTTCAGCCTTGGGATTaGCCTCAGGGGCCAATATGC +
Preference number: 5 (lower is better)
Translates to: RVGCGCTAGGFHSVTCVLLQPWD*PQGPIC
Trigger: GCATATTGGCCCCTGAGGCAAATCCCAAGGCTGAAG...GAGGACACACGTGACGGAATGGAATCCTCCTGCTGTGCAACCACACCCCACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp GGGGCCACAGTGATCCAGGATACAGCCATGATGTTGGGGCATCTGCCAATTTCAGAAGCTGGGAGCACCTaGCTTTCTGTGCTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: GATVIQDTAMMLGHLPISEAGST*LSVLLG
Trigger: CCCCAGCAGCACAGAAAGCAAGGTGCTCCCAGCTTC...TGAAATTGGCAGATGCCCCAACATCATGGCTGTATCCTGGATCACTGTGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS GCA 90 bp CTGTACAGGCCCAGAAGGCCTTCGCTGAGGAGGCTGTGGGGTTCCTaGTGCCACTGTGTCTTTGTTGCCTGCCATGTAGTAAAAATCTCC +
Preference number: 5 (lower is better)
Translates to: LYRPRRPSLRRLWGS*CHCVFVACHVVKIS
Trigger: GGAGATTTTTACTACATGGCAGGCAACAAAGACACAGTGGCAGCAGGAACCCCACAGCCTCCTCAGCGAAGGCCTTCTGGGCCTGTACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
ENSMUST00000229547.2
CDS GCA 90 bp GCTGTGCTTGAAATTGGCTCACATGACCCTCACTCGCATACTGATTaGCAAAGCTGCTCCCCTGGGGAGGTCCATAGCTCTGTACAGGCC +
Preference number: 5 (lower is better)
Translates to: AVLEIGSHDPHSHTD*QSCSPGEVHSSVQA
Trigger: GGCCTGTACAGAGCTATGGACCTCCCCAGGGGAGCAGCTTTGGCAATCAGTATGCGAGTGAGGGTCATGTGAGCCAATTTCAAGCACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
ENSMUST00000229547.2
CDS GCA 90 bp TCTTTGTCATTTTTCAGGGGGCTCCGTACTCTGTCAAGAAACTGCTaGTGCCTTGGGCTCTTGCGTGGGCCTTCCTGCCTATGCTGCGCA +
Preference number: 5 (lower is better)
Translates to: SLSFFRGLRTLSRNC*CLGLLRGPSCLCCA
Trigger: TGCGCAGCATAGGCAGGAAGGCCCACGCAAGAGCCCAAGGCAGCAGCAGTTTCTTGACAGAGTACGGAGCCCCCTGAAAAATGACAAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CCA 90 bp TGCAGAGGCATCTTGGTGGCAGCATTTGTGTACTGCATCACATGCTaGGGAGGATGTTGCTGCTGCTGCTGCTGTTGCTGCTGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: CRGILVAAFVYCITC*GGCCCCCCCCCCCC
Trigger: GCAGCAACAGCAGCAACAGCAGCAGCAGCAGCAACATCCTCCCCAGCATGTGATGCAGTACACAAATGCTGCCACCAAGATGCCTCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp AGAGTGGGGTGTGGTTGCACAGCAGGAGGATTCCATTCCGTCACGTGTGTCCTCGGCAGAGTGCTGTGCTaGAAATTGGCTCACATGACC +
Preference number: 5 (lower is better)
Translates to: RVGCGCTAGGFHSVTCVLGRVLC*KLAHMT
Trigger: GGTCATGTGAGCCAATTTCAAGCACAGCACTCTGCC...GAGGACACACGTGACGGAATGGAATCCTCCTGCTGTGCAACCACACCCCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp CTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGACAGAAGATGGCAGAGTaGAGGGCCGCTGCATTGGTT +
Preference number: 5 (lower is better)
Translates to: LDSACFSSRGLGLHGFHGQKMAE*RAAALV
Trigger: AACCAATGCAGCGGCCCTCAACTCTGCCATCTTCTG...TCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp CTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGAGCCACTAGCCATCCCTaGATGTTCCTGTGCGCTTCT +
Preference number: 5 (lower is better)
Translates to: LDSACFSSRGLGLHGFHGATSHP*MFLCAS
Trigger: AGAAGCGCACAGGAACATCAAGGGATGGCTAGTGGC...TCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp AGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGACCATCTGGTCTCCCTaGGTTACCACCAGGCTTCTG +
Preference number: 5 (lower is better)
Translates to: RLCLFQQQRPGPPWFPWMTIWSP*VTTRLL
Trigger: CAGAAGCCTGGTGGTAACCAAGGGAGACCAGATGGT...CATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp CCTGGGCCTCCATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTACCAACTTTTGCCTCTGCTTTTTaGGCTTTGGCTCCCCATCTG +
Preference number: 5 (lower is better)
Translates to: PGPPWFPWMLWVPTRVPTFASAF*ALAPHL
Trigger: CAGATGGGGAGCCAAAGCCAAAAAAGCAGAGGCAAA...AGTTGGTACCCTTGTGGGGACCCACAGCATCCATGGAAACCATGGAGGCCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp GCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTTACAATGGGAACTGCTaGTTTGGTTTTCCGCTTCCT +
Preference number: 5 (lower is better)
Translates to: AEAWASMVSMDAVGPHKGYNGNC*FGFPLP
Trigger: AGGAAGCGGAAAACCAAACAAGCAGTTCCCATTGTA...ACCCTTGTGGGGACCCACAGCATCCATGGAAACCATGGAGGCCCAGGCCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp GCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTCTTTTGTGCCGAACCTaGACTTTGCTCTGCATTTCT +
Preference number: 5 (lower is better)
Translates to: AEAWASMVSMDAVGPHKGLLCRT*TLLCIS
Trigger: AGAAATGCAGAGCAAAGTCAAGGTTCGGCACAAAAG...ACCCTTGTGGGGACCCACAGCATCCATGGAAACCATGGAGGCCCAGGCCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS GCA 90 bp CTTTGCAGAGGCATCTTGGTGGCAGCATTTGTGTACTGCATCACATaGTGGGGAGGATGTTGCTGCTGCTGCTGCTGTTGCTGCTGTTGC +
Preference number: 5 (lower is better)
Translates to: LCRGILVAAFVYCIT*WGGCCCCCCCCCCC
Trigger: GCAACAGCAGCAACAGCAGCAGCAGCAGCAACATCCTCCCCAGCATGTGATGCAGTACACAAATGCTGCCACCAAGATGCCTCTGCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS GCA 90 bp TCATCTCTCTGGCGATTTCCAGCGCTTCCTGCAGGCCATAGAGCCTaGCACAGACCAGGTAGATTCCATTGGCCCAGAGAATACAACCCT +
Preference number: 5 (lower is better)
Translates to: SSLWRFPALPAGHRA*HRPGRFHWPREYNP
Trigger: AGGGTTGTATTCTCTGGGCCAATGGAATCTACCTGGTCTGTGGCAGGCTCTATGGCCTGCAGGAAGCGCTGGAAATCGCCAGAGAGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CCA 90 bp CAGGCTGGTTGTACTGCCCAACCTGGCTTTGCAGAGGCATCTTGGTaGCAGCATTTGTGTACTGCATCACATGCTGGGGAGGATGTTGCT +
Preference number: 5 (lower is better)
Translates to: QAGCTAQPGFAEASW*QHLCTASHAGEDVA
Trigger: AGCAACATCCTCCCCAGCATGTGATGCAGTACACAAATGCTGCCACCAAGATGCCTCTGCAAAGCCAGGTTGGGCAGTACAACCAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CCA 90 bp TTGCTAGGCTCAGTCCTGCCTGTGAAACTTGGGCCTACTGCGGAGTaGCTACTCGGGCCATTCCCCTCTCCATTGTGGTTAGAGCTATTA +
Preference number: 5 (lower is better)
Translates to: LLGSVLPVKLGPTAE*LLGPFPSPLWLELL
Trigger: TAATAGCTCTAACCACAATGGAGAGGGGAATGGCCCGAGTAGCCACTCCGCAGTAGGCCCAAGTTTCACAGGCAGGACTGAGCCTAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CCA 90 bp GCCGCATTGGTGTGGACCTGCTATCTTGTGGGCCATAGTCTGAAATaGAATCATGGGCTGCTGCTCCAGGACTTGCATTGCCACGGTAAG +
Preference number: 5 (lower is better)
Translates to: AALVWTCYLVGHSLK*NHGLLLQDLHCHGK
Trigger: CTTACCGTGGCAATGCAAGTCCTGGAGCAGCAGCCCATGATTCCATTTCAGACTATGGCCCACAAGATAGCAGGTCCACACCAATGCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CCA 90 bp GCGCCCAGCTTCCTGAGTGCTTGGGTCATGATACGTACCTACTGGTaGGCCATACATCATTCCGTCTTTGTCATTTTTCAGGGGGCTCCG +
Preference number: 5 (lower is better)
Translates to: APSFLSAWVMIRTYW*AIHHSVFVIFQGAP
Trigger: CGGAGCCCCCTGAAAAATGACAAAGACGGAATGATGTATGGCCCACCAGTAGGTACGTATCATGACCCAAGCACTCAGGAAGCTGGGCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp ATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTACCAACTACATGGAATGTCTGCCCAACCTGGCTTaGCAGAGGCATCTTGGTGGC +
Preference number: 5 (lower is better)
Translates to: MVSMDAVGPHKGTNYMECLPNLA*QRHLGG
Trigger: GCCACCAAGATGCCTCTGCAAAGCCAGGTTGGGCAG...ACATTCCATGTAGTTGGTACCCTTGTGGGGACCCACAGCATCCATGGAAACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp TGGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAGCCATTCCTTGGGTACACCCATGGGCACATTGCCTaGCCCACACTGGAGATTCTC +
Preference number: 5 (lower is better)
Translates to: WNVPRKEGARDKPFLGYTHGHIA*PTLEIL
Trigger: GAGAATCTCCAGTGTGGGCAAGGCAATGTGCCCATG...GGTGTACCCAAGGAATGGCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp TGGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAGCCATTCCTTGGGTACACCGAACTCATGGGCACATaGCCTTGCCCACACTGGAGA +
Preference number: 5 (lower is better)
Translates to: WNVPRKEGARDKPFLGYTELMGT*PCPHWR
Trigger: TCTCCAGTGTGGGCAAGGCAATGTGCCCATGAGTTC...GGTGTACCCAAGGAATGGCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp AGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGTCTGAGCACCTTGTGTaGGTGAGGAGCCAGCTTTCT +
Preference number: 5 (lower is better)
Translates to: RLCLFQQQRPGPPWFPWMSEHLV*VRSQLS
Trigger: AGAAAGCTGGCTCCTCACCAACACAAGGTGCTCAGA...CATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp GACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCATGGGAACTGCTTGTTaGGTTTTCCGCTTCCTTGGC +
Preference number: 5 (lower is better)
Translates to: DSACFSSRGLGLHGFHGCMGTAC*VFRFLG
Trigger: GCCAAGGAAGCGGAAAACCAAACAAGCAGTTCCCAT...GCATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp CCTGGGCCTCCATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTACCAACTCCATTAGAAGCGCTTTaGTGCCGAACCTTGACTTTG +
Preference number: 5 (lower is better)
Translates to: PGPPWFPWMLWVPTRVPTPLEAL*CRTLTL
Trigger: CAAAGTCAAGGTTCGGCACAAAAGCGCTTCTAATGG...AGTTGGTACCCTTGTGGGGACCCACAGCATCCATGGAAACCATGGAGGCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS GCA 90 bp GACCTTACAGGAACCTCAGGCTGGTTGTACTGCCCAACCTGGCTTTaGAGAGGCATCTTGGTGGCAGCATTTGTGTACTGCATCACATGC +
Preference number: 5 (lower is better)
Translates to: DLTGTSGWLYCPTWL*RGILVAAFVYCITC
Trigger: GCATGTGATGCAGTACACAAATGCTGCCACCAAGATGCCTCTGCAAAGCCAGGTTGGGCAGTACAACCAGCCTGAGGTTCCTGTAAGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS GCA 90 bp CTTCCTGCCTATGCTGCGCAGCAGCGATCACTCCCTGAGCAGAACTaGTGGCCCAGTCTTTATACTCCTCTTGTTGCTGTTGGTACATCT +
Preference number: 5 (lower is better)
Translates to: LPAYAAQQRSLPEQN*WPSLYTPLVAVGTS
Trigger: AGATGTACCAACAGCAACAAGAGGAGTATAAAGACTGGGCCAGCAGTTCTGCTCAGGGAGTGATCGCTGCTGCGCAGCATAGGCAGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS GCA 90 bp CAAACCAGGTGCCCCATAACAGAAGACTCTGTTACCACAGGCCCCTaGAGCATAAAGGATGAAGCTGGGAGCACCTTGCTTTCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: QTRCPITEDSVTTGP*SIKDEAGSTLLSVL
Trigger: CAGCACAGAAAGCAAGGTGCTCCCAGCTTCATCCTTTATGCTGCAGGGGCCTGTGGTAACAGAGTCTTCTGTTATGGGGCACCTGGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CCA 90 bp ATGGGAGACCTTACAGGAACCTCAGGCTGGTTGTACTGCCCAACCTaGCTTTGCAGAGGCATCTTGGTGGCAGCATTTGTGTACTGCATC +
Preference number: 5 (lower is better)
Translates to: MGDLTGTSGWLYCPT*LCRGILVAAFVYCI
Trigger: GATGCAGTACACAAATGCTGCCACCAAGATGCCTCTGCAAAGCCAGGTTGGGCAGTACAACCAGCCTGAGGTTCCTGTAAGGTCTCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CCA 90 bp AAATTCTGGTGGAACTGCATGGGAGACCTTACAGGAACCTCAGGCTaGTTGTACTGCCCAACCTGGCTTTGCAGAGGCATCTTGGTGGCA +
Preference number: 5 (lower is better)
Translates to: KFWWNCMGDLTGTSG*LYCPTWLCRGILVA
Trigger: TGCCACCAAGATGCCTCTGCAAAGCCAGGTTGGGCAGTACAACCAGCCTGAGGTTCCTGTAAGGTCTCCCATGCAGTTCCACCAGAATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CCA 90 bp CAGACCATCACTAGACATGAGACAGCGCCCAGCTTCCTGAGTGCTTaGGTCATGATACGTACCTACTGGTGGGCCATACATCATTCCGTC +
Preference number: 5 (lower is better)
Translates to: QTITRHETAPSFLSA*VMIRTYWWAIHHSV
Trigger: GACGGAATGATGTATGGCCCACCAGTAGGTACGTATCATGACCCAAGCACTCAGGAAGCTGGGCGCTGTCTCATGTCTAGTGATGGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp GATCCAGGATACAGCCATGATGTTGGGGCATCTGCCAATTTCACCACTACCACCCAGAAGATGGCAGAGTaGAGGGCCGCTGCATTGGTT +
Preference number: 5 (lower is better)
Translates to: DPGYSHDVGASANFTTTTQKMAE*RAAALV
Trigger: AACCAATGCAGCGGCCCTCAACTCTGCCATCTTCTG...GGTGGTAGTGGTGAAATTGGCAGATGCCCCAACATCATGGCTGTATCCTGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp GACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCTCTTGGTGGCAGCATTaGTGTACTGCATCACATGCT +
Preference number: 5 (lower is better)
Translates to: DSACFSSRGLGLHGFHGCSWWQH*CTASHA
Trigger: AGCATGTGATGCAGTACACAAATGCTGCCACCAAGA...GCATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp ATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTACCAACTACATGGAATGTGGAACCTCAGGCTGGTaGTACTGCCCAACCTGGCTT +
Preference number: 5 (lower is better)
Translates to: MVSMDAVGPHKGTNYMECGTSGW*YCPTWL
Trigger: AAGCCAGGTTGGGCAGTACAACCAGCCTGAGGTTCC...ACATTCCATGTAGTTGGTACCCTTGTGGGGACCCACAGCATCCATGGAAACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp GGGGCCACAGTGATCCAGGATACAGCCATGATGTTGGGGCATCTGCCAATTTCATCTGAGCACCTTGTGTaGGTGAGGAGCCAGCTTTCT +
Preference number: 5 (lower is better)
Translates to: GATVIQDTAMMLGHLPISSEHLV*VRSQLS
Trigger: AGAAAGCTGGCTCCTCACCAACACAAGGTGCTCAGA...TGAAATTGGCAGATGCCCCAACATCATGGCTGTATCCTGGATCACTGTGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp CAGGGCAGAGTGGGGTGTGGTTGCACAGCAGGAGGATTCCATTCCGTCACGTGTTGTAAAGAACTCCTATaGGCCCTCTCTGAAAAGGTC +
Preference number: 5 (lower is better)
Translates to: QGRVGCGCTAGGFHSVTCCKELL*ALSEKV
Trigger: GACCTTTTCAGAGAGGGCCAATAGGAGTTCTTTACA...ACACGTGACGGAATGGAATCCTCCTGCTGTGCAACCACACCCCACTCTGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp CAGGGCAGAGTGGGGTGTGGTTGCACAGCAGGAGGATTCCATTCCGTCACGTGTTACATCATTCCGTCTTaGTCATTTTTCAGGGGGCTC +
Preference number: 5 (lower is better)
Translates to: QGRVGCGCTAGGFHSVTCYIIPS*SFFRGL
Trigger: GAGCCCCCTGAAAAATGACAAAGACGGAATGATGTA...ACACGTGACGGAATGGAATCCTCCTGCTGTGCAACCACACCCCACTCTGCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp AGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGGGGTTTGGAAGGTCCTaGGAGGAATCTCTCTTAGGA +
Preference number: 5 (lower is better)
Translates to: RLCLFQQQRPGPPWFPWMGFGRS*EESLLG
Trigger: TCCTAAGAGAGATTCCTCCAAGGACCTTCCAAACCC...CATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp CAAGGGTACCAACTACATGGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAGCTTCCATCTCAGCCTCTaGAGTAGCCACAGTGCCACC +
Preference number: 5 (lower is better)
Translates to: QGYQLHGMCQGKRAPEISFHLSL*SSHSAT
Trigger: GGTGGCACTGTGGCTACTCAAGAGGCTGAGATGGAA...GCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCATGTAGTTGGTACCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp GCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTTGTTTCTTTTGCTTATaGACACTACCGATTGGTCTC +
Preference number: 5 (lower is better)
Translates to: AEAWASMVSMDAVGPHKGCFFCL*TLPIGL
Trigger: GAGACCAATCGGTAGTGTCAATAAGCAAAAGAAACA...ACCCTTGTGGGGACCCACAGCATCCATGGAAACCATGGAGGCCCAGGCCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp TCACGCCACAGTTCTCTCCTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCCATTAGAAGCGCTTTaGTGCCGAACCTTGACTTTG +
Preference number: 5 (lower is better)
Translates to: SRHSSLLDSACFSSRGLGPLEAL*CRTLTL
Trigger: CAAAGTCAAGGTTCGGCACAAAAGCGCTTCTAATGG...GCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAGGAGAGAACTGTGGCGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS TCA 90 bp TCAGAGCTAGTGCTCTGGCCACTCAGTTGCCTCACCCTCTCACCTTaGTCTTCTGAACTACTAGAGCAACCTCCATCCAATGACTCAGCC +
Preference number: 5 (lower is better)
Translates to: SELVLWPLSCLTLSP*SSELLEQPPSNDSA
Trigger: GGCTGAGTCATTGGATGGAGGTTGCTCTAGTAGTTCAGAAGATCAAGGTGAGAGGGTGAGGCAACTGAGTGGCCAGAGCACTAGCTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS GCA 90 bp GCAGCTGGAGAAGGGTTAGAAATAGGGCTGAAATTCTGGTGGAACTaGATGGGAGACCTTACAGGAACCTCAGGCTGGTTGTACTGCCCA +
Preference number: 5 (lower is better)
Translates to: AAGEGLEIGLKFWWN*MGDLTGTSGWLYCP
Trigger: TGGGCAGTACAACCAGCCTGAGGTTCCTGTAAGGTCTCCCATGCAGTTCCACCAGAATTTCAGCCCTATTTCTAACCCTTCTCCAGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CCA 90 bp ACAGCGCCCAGCTTCCTGAGTGCTTGGGTCATGATACGTACCTACTaGTGGGCCATACATCATTCCGTCTTTGTCATTTTTCAGGGGGCT +
Preference number: 5 (lower is better)
Translates to: TAPSFLSAWVMIRTY*WAIHHSVFVIFQGA
Trigger: AGCCCCCTGAAAAATGACAAAGACGGAATGATGTATGGCCCACCAGTAGGTACGTATCATGACCCAAGCACTCAGGAAGCTGGGCGCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp AGAGTGGGGTGTGGTTGCACAGCAGGAGGATTCCATTCCGTCACGTGTGTCCTCAGGAAGATTGGCCACTaGACTACTCAAAGCACTCAA +
Preference number: 5 (lower is better)
Translates to: RVGCGCTAGGFHSVTCVLRKIGH*TTQSTQ
Trigger: TTGAGTGCTTTGAGTAGTCAAGTGGCCAATCTTCCT...GAGGACACACGTGACGGAATGGAATCCTCCTGCTGTGCAACCACACCCCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp GACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCCCAACTGTCTTCTCATaGACTTTTGTGTTCCCCTCA +
Preference number: 5 (lower is better)
Translates to: DSACFSSRGLGLHGFHGCPTVFS*TFVFPS
Trigger: TGAGGGGAACACAAAAGTCAATGAGAAGACAGTTGG...GCATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp GACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCCTGGGAGCCTTTATCTaGTCCACCAGATTTTTCTAC +
Preference number: 5 (lower is better)
Translates to: DSACFSSRGLGLHGFHGCLGAFI*STRFFY
Trigger: GTAGAAAAATCTGGTGGACAAGATAAAGGCTCCCAG...GCATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp GCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTAGCTTGAGATTTGGATaGTTCAAAGTCTTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: AEAWASMVSMDAVGPHKGSLRFG*FKVFLF
Trigger: AAAGAGGAAGACTTTGAACAATCCAAATCTCAAGCT...ACCCTTGTGGGGACCCACAGCATCCATGGAAACCATGGAGGCCCAGGCCTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp TCACGCCACAGTTCTCTCCTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCTGTAAAGAACTCCTATaGGCCCTCTCTGAAAAGGTC +
Preference number: 5 (lower is better)
Translates to: SRHSSLLDSACFSSRGLGCKELL*ALSEKV
Trigger: GACCTTTTCAGAGAGGGCCAATAGGAGTTCTTTACA...GCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAGGAGAGAACTGTGGCGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp TGGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAGCCATTCCTTGGGTACACCGCCAGGCTTTCTGAGTaGGGAGAAAAAGGAGCATGT +
Preference number: 5 (lower is better)
Translates to: WNVPRKEGARDKPFLGYTARLSE*GEKGAC
Trigger: ACATGCTCCTTTTTCTCCCAACTCAGAAAGCCTGGC...GGTGTACCCAAGGAATGGCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp AGAGTGGGGTGTGGTTGCACAGCAGGAGGATTCCATTCCGTCACGTGTGTCCTCTACATCATTCCGTCTTaGTCATTTTTCAGGGGGCTC +
Preference number: 5 (lower is better)
Translates to: RVGCGCTAGGFHSVTCVLYIIPS*SFFRGL
Trigger: GAGCCCCCTGAAAAATGACAAAGACGGAATGATGTA...GAGGACACACGTGACGGAATGGAATCCTCCTGCTGTGCAACCACACCCCACTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp AGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGTGGCCCATACCGTTTTaGATTAGACATTCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: RLCLFQQQRPGPPWFPWMWPIPF*IRHSWR
Trigger: CCTCCAGGAATGTCTAATCAAAAACGGTATGGGCCA...CATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp GGGGCCACAGTGATCCAGGATACAGCCATGATGTTGGGGCATCTGCCAATTTCAGCAGGACAGTTTCTATaGTCTGGGTTTGGAAGGTCC +
Preference number: 5 (lower is better)
Translates to: GATVIQDTAMMLGHLPISAGQFL*SGFGRS
Trigger: GGACCTTCCAAACCCAGACAATAGAAACTGTCCTGC...TGAAATTGGCAGATGCCCCAACATCATGGCTGTATCCTGGATCACTGTGGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp ATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTACCAACTACATGGAATGTTCTTTCTCTTCAGCCTaGGGATTTGCCTCAGGGGCC +
Preference number: 5 (lower is better)
Translates to: MVSMDAVGPHKGTNYMECSFSSA*GFASGA
Trigger: GGCCCCTGAGGCAAATCCCAAGGCTGAAGAGAAAGA...ACATTCCATGTAGTTGGTACCCTTGTGGGGACCCACAGCATCCATGGAAACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp TCACGCCACAGTTCTCTCCTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTTGATCTCTGGTTCTaGAGGTTCTACAATGGGAAC +
Preference number: 5 (lower is better)
Translates to: SRHSSLLDSACFSSRGLGLDLWF*RFYNGN
Trigger: GTTCCCATTGTAGAACCTCAAGAACCAGAGATCAAG...GCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAGGAGAGAACTGTGGCGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp TCACGCCACAGTTCTCTCCTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCAGTGGCTGCATAATCTaGGGGATAAAAGGGTCCAAA +
Preference number: 5 (lower is better)
Translates to: SRHSSLLDSACFSSRGLGSGCII*GIKGSK
Trigger: TTTGGACCCTTTTATCCCCAAGATTATGCAGCCACT...GCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAGGAGAGAACTGTGGCGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp AGAGTGGGGTGTGGTTGCACAGCAGGAGGATTCCATTCCGTCACGTGTGTCCTCAGTGGCTGCATAATCTaGGGGATAAAAGGGTCCAAA +
Preference number: 5 (lower is better)
Translates to: RVGCGCTAGGFHSVTCVLSGCII*GIKGSK
Trigger: TTTGGACCCTTTTATCCCCAAGATTATGCAGCCACT...GAGGACACACGTGACGGAATGGAATCCTCCTGCTGTGCAACCACACCCCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp CCCACATTGTCACTATGGAGATTGTGTCCATGGAAACAGCCATTCCAACATCTTCATGGAAGGGGAGGCTaGTGCTTGGGGCACCTCACC +
Preference number: 5 (lower is better)
Translates to: PTLSLWRLCPWKQPFQHLHGRGG*CLGHLT
Trigger: GGTGAGGTGCCCCAAGCACAAGCCTCCCCTTCCATG...AAGATGTTGGAATGGCTGTTTCCATGGACACAATCTCCATAGTGACAATGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109510.10
CDS TCA 90 bp CAGCATTCACACTGTAACTGCCATCATAGCTTTGTCCAGACTGACTaGAACGCTGTGGAGAAGGGAAGGAGGAGGAGGAAGAGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: QHSHCNCHHSFVQTD*NAVEKGRRRRKRRK
Trigger: CTTCCTCCTCTTCCTCCTCCTCCTTCCCTTCTCCACAGCGTTTCAGTCAGTCTGGACAAAGCTATGATGGCAGTTACAGTGTGAATGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS TCA 90 bp GATGTGTGGCTGATTTCCTTTACGCCACTATTGCTAGGTGGTCTCTaGCTGGCAGCAGGATCATCCTCCTGGGAGCCTTTATCTTGTCCA +
Preference number: 5 (lower is better)
Translates to: DVWLISFTPLLLGGL*LAAGSSSWEPLSCP
Trigger: TGGACAAGATAAAGGCTCCCAGGAGGATGATCCTGCTGCCAGTCAGAGACCACCTAGCAATAGTGGCGTAAAGGAAATCAGCCACACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS TCA 90 bp TGGCATCAGTACCCATGTGTCCCAATGAGTGAGCCCCTGGGTCCCTaGCAATCTGTCTTAGTGGGGATATATCACAGATTACTGACCTCC +
Preference number: 5 (lower is better)
Translates to: WHQYPCVPMSEPLGP*QSVLVGIYHRLLTS
Trigger: GGAGGTCAGTAATCTGTGATATATCCCCACTAAGACAGATTGTCAGGGACCCAGGGGCTCACTCATTGGGACACATGGGTACTGATGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS GCA 90 bp AGGTCATATGTGGGTTCATGTGATGAGGGTCTCCCCCTGGGCCTCTaGTCCTGCCTGGAGACATCTTCAATTTTTCTGCAAAGTCATGGT +
Preference number: 5 (lower is better)
Translates to: RSYVGSCDEGLPLGL*SCLETSSIFLQSHG
Trigger: ACCATGACTTTGCAGAAAAATTGAAGATGTCTCCAGGCAGGAGCAGAGGCCCAGGGGGAGACCCTCATCACATGAACCCACATATGACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CCA 90 bp ACTGTAACTGCCATCATAGCTTTGTCCAGACTGACTGAAACGCTGTaGAGAAGGGAAGGAGGAGGAGGAAGAGGAGGAAGCAGAAGACTG +
Preference number: 5 (lower is better)
Translates to: TVTAIIALSRLTETL*RREGGGGRGGSRRL
Trigger: CAGTCTTCTGCTTCCTCCTCTTCCTCCTCCTCCTTCCCTTCTCCACAGCGTTTCAGTCAGTCTGGACAAAGCTATGATGGCAGTTACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CCA 90 bp GGGCCTACTGCGGAGTGGCTACTCGGGCCATTCCCCTCTCCATTGTaGTTAGAGCTATTATTATCACCATTCTTGTTTCCTTTGCTCCCT +
Preference number: 5 (lower is better)
Translates to: GPTAEWLLGPFPSPL*LELLLSPFLFPLLP
Trigger: AGGGAGCAAAGGAAACAAGAATGGTGATAATAATAGCTCTAACCACAATGGAGAGGGGAATGGCCCGAGTAGCCACTCCGCAGTAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp CTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGACCAACTGTCTTCTCATaGACTTTTGTGTTCCCCTCA +
Preference number: 5 (lower is better)
Translates to: LDSACFSSRGLGLHGFHGPTVFS*TFVFPS
Trigger: TGAGGGGAACACAAAAGTCAATGAGAAGACAGTTGG...TCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp CTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGACTGGGAGCCTTTATCTaGTCCACCAGATTTTTCTAC +
Preference number: 5 (lower is better)
Translates to: LDSACFSSRGLGLHGFHGLGAFI*STRFFY
Trigger: GTAGAAAAATCTGGTGGACAAGATAAAGGCTCCCAG...TCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp CAGGGCAGAGTGGGGTGTGGTTGCACAGCAGGAGGATTCCATTCCGTCACGTGTTTATTATCACCATTCTaGTTTCCTTTGCTCCCTCCT +
Preference number: 5 (lower is better)
Translates to: QGRVGCGCTAGGFHSVTCLLSPF*FPLLPP
Trigger: AGGAGGGAGCAAAGGAAACAAGAATGGTGATAATAA...ACACGTGACGGAATGGAATCCTCCTGCTGTGCAACCACACCCCACTCTGCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp CAAGGGTACCAACTACATGGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAGCAGGGATCCAATACTCTaGTTCAGAAGGCCCCTGCTA +
Preference number: 5 (lower is better)
Translates to: QGYQLHGMCQGKRAPEISRDPIL*FRRPLL
Trigger: TAGCAGGGGCCTTCTGAACAAGAGTATTGGATCCCT...GCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCATGTAGTTGGTACCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp CCTGGGCCTCCATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTACCAACTTTTATACTCCTCTTGTaGCTGTTGGTACATCTGTCT +
Preference number: 5 (lower is better)
Translates to: PGPPWFPWMLWVPTRVPTFILLL*LLVHLS
Trigger: AGACAGATGTACCAACAGCAACAAGAGGAGTATAAA...AGTTGGTACCCTTGTGGGGACCCACAGCATCCATGGAAACCATGGAGGCCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp GATCCAGGATACAGCCATGATGTTGGGGCATCTGCCAATTTCACCACTACCACCGGGTTTGGAAGGTCCTaGGAGGAATCTCTCTTAGGA +
Preference number: 5 (lower is better)
Translates to: DPGYSHDVGASANFTTTTGFGRS*EESLLG
Trigger: TCCTAAGAGAGATTCCTCCAAGGACCTTCCAAACCC...GGTGGTAGTGGTGAAATTGGCAGATGCCCCAACATCATGGCTGTATCCTGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp GATCCAGGATACAGCCATGATGTTGGGGCATCTGCCAATTTCACCACTACCACCACATGTGCCTCTGTCTaGACTTTGTCATCCCCACTG +
Preference number: 5 (lower is better)
Translates to: DPGYSHDVGASANFTTTTTCASV*TLSSPL
Trigger: CAGTGGGGATGACAAAGTCAAGACAGAGGCACATGT...GGTGGTAGTGGTGAAATTGGCAGATGCCCCAACATCATGGCTGTATCCTGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp GAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCAGTCGAAGCTGGGAGCACCTaGCTTTCTGTGCTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: ETDSNQGKGGCHLSTLSVEAGST*LSVLLG
Trigger: CCCCAGCAGCACAGAAAGCAAGGTGCTCCCAGCTTC...GACTGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp CCCACATTGTCACTATGGAGATTGTGTCCATGGAAACAGCCATTCCAACATCTTCTCCACAGTCTCACCTaGTGCTTGGGGCACCTCACC +
Preference number: 5 (lower is better)
Translates to: PTLSLWRLCPWKQPFQHLLHSLT*CLGHLT
Trigger: GGTGAGGTGCCCCAAGCACAAGGTGAGACTGTGGAG...AAGATGTTGGAATGGCTGTTTCCATGGACACAATCTCCATAGTGACAATGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048966.7
CDS TCA 90 bp TCATTCCTCCCAATTCTGGCATCAGTACCCATGTGTCCCAATGAGTaGGCCCCTGGGTCCCTGACAATCTGTCTTAGTGGGGATATATCA +
Preference number: 5 (lower is better)
Translates to: SFLPILASVPMCPNE*APGSLTICLSGDIS
Trigger: TGATATATCCCCACTAAGACAGATTGTCAGGGACCCAGGGGCTCACTCATTGGGACACATGGGTACTGATGCCAGAATTGGGAGGAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS TCA 90 bp CTCCTGCCTGGAGACATCTTCAATTTTTCTGCAAAGTCATGGTACTaGGAAGAGGACCGACCCCTCATAGTCTCCCGGCTACCAACTCTA +
Preference number: 5 (lower is better)
Translates to: LLPGDIFNFSAKSWY*EEDRPLIVSRLPTL
Trigger: TAGAGTTGGTAGCCGGGAGACTATGAGGGGTCGGTCCTCTTCTCAGTACCATGACTTTGCAGAAAAATTGAAGATGTCTCCAGGCAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS TCA 90 bp AGGTCAGATACCACCTCACACTTTCGCTTTTCCATCTCAGCCTCTTaGGTAGCCACAGTGCCACCTTCAGGAGGACCACTCTTTAGAGAT +
Preference number: 5 (lower is better)
Translates to: RSDTTSHFRFSISAS*VATVPPSGGPLFRD
Trigger: ATCTCTAAAGAGTGGTCCTCCTGAAGGTGGCACTGTGGCTACTCAAGAGGCTGAGATGGAAAAGCGAAAGTGTGAGGTGGTATCTGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS GCA 90 bp GTAATCCTGCTGATAATGAGACACACCACCAAGGGCAGAGTGCTGTaGTTGAAATTGGCTCACATGACCCTCACTCGCATACTGATTGCC +
Preference number: 5 (lower is better)
Translates to: VILLIMRHTTKGRVL*LKLAHMTLTRILIA
Trigger: GGCAATCAGTATGCGAGTGAGGGTCATGTGAGCCAATTTCAAGCACAGCACTCTGCCCTTGGTGGTGTGTCTCATTATCAGCAGGATTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS GCA 90 bp CATAGTACCAGAGGGTTCCTTTCCAGTAGAAGCTGTTTCTACATGTaGCTCTGTCTTGACTTTGTCATCCCCACTGCCACGCCACTCTTC +
Preference number: 5 (lower is better)
Translates to: HSTRGFLSSRSCFYM*LCLDFVIPTATPLF
Trigger: GAAGAGTGGCGTGGCAGTGGGGATGACAAAGTCAAGACAGAGGCACATGTAGAAACAGCTTCTACTGGAAAGGAACCCTCTGGTACTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp GAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCAGTCTTGCTGCGGCTGCTGTaGCTGAGGTTGTGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: ETDSNQGKGGCHLSTLSVLLRLL*LRLWLL
Trigger: CAGCAACCACAACCTCAGCAACAGCAGCCGCAGCAA...GACTGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp TCACGCCACAGTTCTCTCCTAGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCTTATTATCACCATTCTaGTTTCCTTTGCTCCCTCCT +
Preference number: 5 (lower is better)
Translates to: SRHSSLLDSACFSSRGLGLLSPF*FPLLPP
Trigger: AGGAGGGAGCAAAGGAAACAAGAATGGTGATAATAA...GCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAGGAGAGAACTGTGGCGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp AGACTCTGCTTGTTTCAGCAGCAGAGGCCTGGGCCTCCATGGTTTCCATGGATGCTTCCTGTAGAAGACTaGGGAACTTCTCATTTCTAC +
Preference number: 5 (lower is better)
Translates to: RLCLFQQQRPGPPWFPWMLPVED*GTSHFY
Trigger: GTAGAAATGAGAAGTTCCCAAGTCTTCTACAGGAAG...CATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp TGTGAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCACAGGGACCCGCCGCATaGGTGTGGACCTGCTATCTT +
Preference number: 5 (lower is better)
Translates to: CETDSNQGKGGCHLSTLSQGPAA*VWTCYL
Trigger: AAGATAGCAGGTCCACACCAATGCGGCGGGTCCCTG...TGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp CAAGGGTACCAACTACATGGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAGCTGGCCCATACCGTTTTaGATTAGACATTCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: QGYQLHGMCQGKRAPEISWPIPF*IRHSWR
Trigger: CCTCCAGGAATGTCTAATCAAAAACGGTATGGGCCA...GCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCATGTAGTTGGTACCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp GAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCAGTCGCCTCTGTCTTGACTTaGTCATCCCCACTGCCACGC +
Preference number: 5 (lower is better)
Translates to: ETDSNQGKGGCHLSTLSVASVLT*SSPLPR
Trigger: GCGTGGCAGTGGGGATGACAAAGTCAAGACAGAGGC...GACTGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp ATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTACCAACTACATGGAATGTACATGTGCCTCTGTCTaGACTTTGTCATCCCCACTG +
Preference number: 5 (lower is better)
Translates to: MVSMDAVGPHKGTNYMECTCASV*TLSSPL
Trigger: CAGTGGGGATGACAAAGTCAAGACAGAGGCACATGT...ACATTCCATGTAGTTGGTACCCTTGTGGGGACCCACAGCATCCATGGAAACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp CAAGGGTACCAACTACATGGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAGCCGGCTCCTCACCAATTaGGTCTGTTCTTCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: QGYQLHGMCQGKRAPEISRLLTN*VCSSSS
Trigger: TGAAGAAGAAGAACAGACCAAATTGGTGAGGAGCCG...GCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCATGTAGTTGGTACCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp TGGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAGCCATTCCTTGGGTACACCTGGACCCAAAATTCGTaGCTGTCAAGAGGTAGTTCA +
Preference number: 5 (lower is better)
Translates to: WNVPRKEGARDKPFLGYTWTQNS*LSRGSS
Trigger: TGAACTACCTCTTGACAGCAACGAATTTTGGGTCCA...GGTGTACCCAAGGAATGGCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS GCA 90 bp CGTTCTCTTTCTCTTCAGCCTTGGGATTTGCCTCAGGGGCCAATATaGCCACTGGAGCTACATTCTTTGAGTCAGGAAAGATTAGTGGTG +
Preference number: 5 (lower is better)
Translates to: RSLSLQPWDLPQGPI*PLELHSLSQERLVV
Trigger: CACCACTAATCTTTCCTGACTCAAAGAATGTAGCTCCAGTGGGCATATTGGCCCCTGAGGCAAATCCCAAGGCTGAAGAGAAAGAGAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS GCA 90 bp TTCCATTGGCCCAGAGAATACAACCCTCATGGACCCAAAATTCGTTaGTGTCAAGAGGTAGTTCAGGGATTTGTAACTCCAGCTCAGGCC +
Preference number: 5 (lower is better)
Translates to: FHWPREYNPHGPKIR*CQEVVQGFVTPAQA
Trigger: GGCCTGAGCTGGAGTTACAAATCCCTGAACTACCTCTTGACAGCAACGAATTTTGGGTCCATGAGGGTTGTATTCTCTGGGCCAATGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CCA 90 bp CACTCTTCAGAAGGCCCTGGAAGAGGCTTCTCAACATTCGATTCCTaGTTAGTTACACTGACTAGGTCAGATACCACCTCACACTTTCGC +
Preference number: 5 (lower is better)
Translates to: HSSEGPGRGFSTFDS*LVTLTRSDTTSHFR
Trigger: GCGAAAGTGTGAGGTGGTATCTGACCTAGTCAGTGTAACTAACCAGGAATCGAATGTTGAGAAGCCTCTTCCAGGGCCTTCTGAAGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp TGTGAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCAGCTAGAGGCCTGCTGTaGATACTGAGCACTCCCAGG +
Preference number: 5 (lower is better)
Translates to: CETDSNQGKGGCHLSTLSARGLL*ILSTPR
Trigger: CCTGGGAGTGCTCAGTATCAACAGCAGGCCTCTAGC...TGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp GAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCAGTCTTGAGGGCCGCTGCATaGGTTGTAGATGCGATGAGC +
Preference number: 5 (lower is better)
Translates to: ETDSNQGKGGCHLSTLSVLRAAA*VVDAMS
Trigger: GCTCATCGCATCTACAACCAATGCAGCGGCCCTCAA...GACTGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp GAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCAGTCGAACTCATGGGCACATaGCCTTGCCCACACTGGAGA +
Preference number: 5 (lower is better)
Translates to: ETDSNQGKGGCHLSTLSVELMGT*PCPHWR
Trigger: TCTCCAGTGTGGGCAAGGCAATGTGCCCATGAGTTC...GACTGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp CAAGGGTACCAACTACATGGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAGCAGGAGCCTTCTGAGTTaGTACAGCTATCTGCTTTCT +
Preference number: 5 (lower is better)
Translates to: QGYQLHGMCQGKRAPEISRSLLS*YSYLLS
Trigger: AGAAAGCAGATAGCTGTACAAACTCAGAAGGCTCCT...GCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCATGTAGTTGGTACCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp GAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCAGTCCTGCTGCTCCAGGACTaGCATTGCCACGGTAAGTCT +
Preference number: 5 (lower is better)
Translates to: ETDSNQGKGGCHLSTLSVLLLQD*HCHGKS
Trigger: AGACTTACCGTGGCAATGCAAGTCCTGGAGCAGCAG...GACTGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp ATGGAAACAGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGGGAGGACCACTGCTTTaGGCTGGAGAAGTCTGCCGA +
Preference number: 5 (lower is better)
Translates to: METAIPTSCIFLFLWCHQGGPLL*AGEVCR
Trigger: TCGGCAGACTTCTCCAGCCAAAAGCAGTGGTCCTCC...CTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCTGTTTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp TGTGAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCAGGAGGACCACTGCTTTaGGCTGGAGAAGTCTGCCGA +
Preference number: 5 (lower is better)
Translates to: CETDSNQGKGGCHLSTLSGGPLL*AGEVCR
Trigger: TCGGCAGACTTCTCCAGCCAAAAGCAGTGGTCCTCC...TGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp GGGGCCACAGTGATCCAGGATACAGCCATGATGTTGGGGCATCTGCCAATTTCACTGGAGCTACATTCTTaGAGTCAGGAAAGATTAGTG +
Preference number: 5 (lower is better)
Translates to: GATVIQDTAMMLGHLPISLELHS*SQERLV
Trigger: CACTAATCTTTCCTGACTCAAAGAATGTAGCTCCAG...TGAAATTGGCAGATGCCCCAACATCATGGCTGTATCCTGGATCACTGTGGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp GAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCAGTCCTTCAGCCTTGGGATTaGCCTCAGGGGCCAATATGC +
Preference number: 5 (lower is better)
Translates to: ETDSNQGKGGCHLSTLSVLQPWD*PQGPIC
Trigger: GCATATTGGCCCCTGAGGCAAATCCCAAGGCTGAAG...GACTGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp CAAGGGTACCAACTACATGGAATGTGCCAAGGAAAGAGGGCGCCAGAGATAAGCCTTTTGTGCCGAACCTaGACTTTGCTCTGCATTTCT +
Preference number: 5 (lower is better)
Translates to: QGYQLHGMCQGKRAPEISLLCRT*TLLCIS
Trigger: AGAAATGCAGAGCAAAGTCAAGGTTCGGCACAAAAG...GCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCATGTAGTTGGTACCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS TCA 90 bp ATTAGAAGCGCTTTTGTGCCGAACCTTGACTTTGCTCTGCATTTCTaGGGACCTCTTAGGAGGTGGATTCTTCGGAAGAGTGGCTGCATA +
Preference number: 5 (lower is better)
Translates to: IRSAFVPNLDFALHF*GPLRRWILRKSGCI
Trigger: TATGCAGCCACTCTTCCGAAGAATCCACCTCCTAAGAGGTCCTCAGAAATGCAGAGCAAAGTCAAGGTTCGGCACAAAAGCGCTTCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS GCA 90 bp ATTAGCTGTAAAATTCGGTTTCTGGAACTCATGGGCACATTGCCTTaGCCACACTGGAGATTCTCACCACTCTGCATGAGAGGAGAAGGT +
Preference number: 5 (lower is better)
Translates to: ISCKIRFLELMGTLP*PHWRFSPLCMRGEG
Trigger: ACCTTCTCCTCTCATGCAGAGTGGTGAGAATCTCCAGTGTGGGCAAGGCAATGTGCCCATGAGTTCCAGAAACCGAATTTTACAGCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS GCA 90 bp ATCCAGTGTGACTGTGTCTCCCCCAGCCTCAGCACTGTTTGCAGATaGACTCCTCCTAATATTTGGAGATGTGATCTTCTGAACTATAGC +
Preference number: 5 (lower is better)
Translates to: IQCDCVSPSLSTVCR*TPPNIWRCDLLNYS
Trigger: GCTATAGTTCAGAAGATCACATCTCCAAATATTAGGAGGAGTGCATCTGCAAACAGTGCTGAGGCTGGGGGAGACACAGTCACACTGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp CCCACATTGTCACTATGGAGATTGTGTCCATGGAAACAGCCATTCCAACATCTTTCCGTGGTAACTGCTTaGCTCCCGAAACGACTGCAT +
Preference number: 5 (lower is better)
Translates to: PTLSLWRLCPWKQPFQHLSVVTA*LPKRLH
Trigger: ATGCAGTCGTTTCGGGAGCAAAGCAGTTACCACGGA...AAGATGTTGGAATGGCTGTTTCCATGGACACAATCTCCATAGTGACAATGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp ATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTACCAACTACATGGAATGTGGATTGGTAAAGCTGTaGTCTCAACTGCTGTACTTG +
Preference number: 5 (lower is better)
Translates to: MVSMDAVGPHKGTNYMECGLVKL*SQLLYL
Trigger: CAAGTACAGCAGTTGAGACAACAGCTTTACCAATCC...ACATTCCATGTAGTTGGTACCCTTGTGGGGACCCACAGCATCCATGGAAACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp ATGGAAACAGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGCTGCTGCTCCAGGACTaGCATTGCCACGGTAAGTCT +
Preference number: 5 (lower is better)
Translates to: METAIPTSCIFLFLWCHQLLLQD*HCHGKS
Trigger: AGACTTACCGTGGCAATGCAAGTCCTGGAGCAGCAG...CTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCTGTTTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp ATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGTGTGATGAAACTGCTGCTGCCTaGGGCTCTTGCGTGGGCCTT +
Preference number: 5 (lower is better)
Translates to: IPTSCIFLFLWCHQFECDETAAA*GSCVGL
Trigger: AAGGCCCACGCAAGAGCCCAAGGCAGCAGCAGTTTC...ATCACACTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp ATGGAAACAGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGACCATCTGGTCTCCCTaGGTTACCACCAGGCTTCTG +
Preference number: 5 (lower is better)
Translates to: METAIPTSCIFLFLWCHQTIWSP*VTTRLL
Trigger: CAGAAGCCTGGTGGTAACCAAGGGAGACCAGATGGT...CTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCTGTTTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp GATCCAGGATACAGCCATGATGTTGGGGCATCTGCCAATTTCACCACTACCACCCTGGAGCTACATTCTTaGAGTCAGGAAAGATTAGTG +
Preference number: 5 (lower is better)
Translates to: DPGYSHDVGASANFTTTTLELHS*SQERLV
Trigger: CACTAATCTTTCCTGACTCAAAGAATGTAGCTCCAG...GGTGGTAGTGGTGAAATTGGCAGATGCCCCAACATCATGGCTGTATCCTGGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp ATGGTTTCCATGGATGCTGTGGGTCCCCACAAGGGTACCAACTACATGGAATGTTGGACCCAAAATTCGTaGCTGTCAAGAGGTAGTTCA +
Preference number: 5 (lower is better)
Translates to: MVSMDAVGPHKGTNYMECWTQNS*LSRGSS
Trigger: TGAACTACCTCTTGACAGCAACGAATTTTGGGTCCA...ACATTCCATGTAGTTGGTACCCTTGTGGGGACCCACAGCATCCATGGAAACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp ATGGAAACAGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGAGTCTCACCTTGTGCTaGGGGCACCTCACCGAGAAA +
Preference number: 5 (lower is better)
Translates to: METAIPTSCIFLFLWCHQSLTLC*GHLTEK
Trigger: TTTCTCGGTGAGGTGCCCCAAGCACAAGGTGAGACT...CTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCTGTTTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048966.7
CDS TCA 90 bp CCAATACTCTTGTTCAGAAGGCCCCTGCTAGCTAATTCATTGGTTTaGCTGACTAAGATGTTAGGCCTTGCAGTTCCTTCCAGGCCACTA +
Preference number: 5 (lower is better)
Translates to: PILLFRRPLLANSLV*LTKMLGLAVPSRPL
Trigger: TAGTGGCCTGGAAGGAACTGCAAGGCCTAACATCTTAGTCAGTCAAACCAATGAATTAGCTAGCAGGGGCCTTCTGAACAAGAGTATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS GCA 90 bp TATATCATCCAGTGTGACTGTGTCTCCCCCAGCCTCAGCACTGTTTaGAGATGCACTCCTCCTAATATTTGGAGATGTGATCTTCTGAAC +
Preference number: 5 (lower is better)
Translates to: YIIQCDCVSPSLSTV*RCTPPNIWRCDLLN
Trigger: GTTCAGAAGATCACATCTCCAAATATTAGGAGGAGTGCATCTGCAAACAGTGCTGAGGCTGGGGGAGACACAGTCACACTGGATGATATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS GCA 90 bp TTAGAACCATTAGAAGCGCTTTTGTGCCGAACCTTGACTTTGCTCTaGATTTCTGAGGACCTCTTAGGAGGTGGATTCTTCGGAAGAGTG +
Preference number: 5 (lower is better)
Translates to: LEPLEALLCRTLTLL*ISEDLLGGGFFGRV
Trigger: CACTCTTCCGAAGAATCCACCTCCTAAGAGGTCCTCAGAAATGCAGAGCAAAGTCAAGGTTCGGCACAAAAGCGCTTCTAATGGTTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS GCA 90 bp TCCTCCTCCTCAGTGTCAGTTTTAGAACCATTAGAAGCGCTTTTGTaGCGAACCTTGACTTTGCTCTGCATTTCTGAGGACCTCTTAGGA +
Preference number: 5 (lower is better)
Translates to: SSSSVSVLEPLEALL*RTLTLLCISEDLLG
Trigger: TCCTAAGAGGTCCTCAGAAATGCAGAGCAAAGTCAAGGTTCGGCACAAAAGCGCTTCTAATGGTTCTAAAACTGACACTGAGGAGGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp ATGGAAACAGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGGAAACCCTGATAGCCTaGATGGCCAGAGGTCTCACT +
Preference number: 5 (lower is better)
Translates to: METAIPTSCIFLFLWCHQETLIA*MARGLT
Trigger: AGTGAGACCTCTGGCCATCAAGGCTATCAGGGTTTC...CTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCTGTTTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp TGGAAACAGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTCTCAACTGCTGTACTaGCTGCTGCTGTTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: WKQPFQHLVSFFSCGVTSSQLLY*LLLLLL
Trigger: CAGCAGCAACAGCAGCAGCAAGTACAGCAGTTGAGA...ACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCTGTTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp TGTGAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCATCTCAACTGCTGTACTaGCTGCTGCTGTTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: CETDSNQGKGGCHLSTLSSQLLY*LLLLLL
Trigger: CAGCAGCAACAGCAGCAGCAAGTACAGCAGTTGAGA...TGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp ATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTCCACTCTACATGGGCACATTGCCTaGCCCACACTGGAGATTCTC +
Preference number: 5 (lower is better)
Translates to: IKNHIAWATYLTSPLSTLHGHIA*PTLEIL
Trigger: GAGAATCTCCAGTGTGGGCAAGGCAATGTGCCCATG...TAGAGTGGAAAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp TACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTCCTTCCATCTCAGCCTCTaGAGTAGCCACAGTGCCACC +
Preference number: 5 (lower is better)
Translates to: YNIKNHIAWATYLTSPLSFHLSL*SSHSAT
Trigger: GGTGGCACTGTGGCTACTCAAGAGGCTGAGATGGAA...GGAAAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp GAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCAGTCATGGGAACTGCTTGTTaGGTTTTCCGCTTCCTTGGC +
Preference number: 5 (lower is better)
Translates to: ETDSNQGKGGCHLSTLSVMGTAC*VFRFLG
Trigger: GCCAAGGAAGCGGAAAACCAAACAAGCAGTTCCCAT...GACTGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CCA 90 bp GGCTTTCTGAGTTGGGAGAAAAAGGAGCATGTAAAGAACTCCTATTaGCCCTCTCTGAAAAGGTCATATGTGGGTTCATGTGATGAGGGT +
Preference number: 5 (lower is better)
Translates to: GFLSWEKKEHVKNSY*PSLKRSYVGSCDEG
Trigger: ACCCTCATCACATGAACCCACATATGACCTTTTCAGAGAGGGCCAATAGGAGTTCTTTACATGCTCCTTTTTCTCCCAACTCAGAAAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CCA 90 bp CTTAGCAGGACTTGTCAGGGTAACAGCAGGACAGTTTCTATTGTCTaGGTTTGGAAGGTCCTTGGAGGAATCTCTCTTAGGAATAGACTT +
Preference number: 5 (lower is better)
Translates to: LSRTCQGNSRTVSIV*VWKVLGGISLRNRL
Trigger: AAGTCTATTCCTAAGAGAGATTCCTCCAAGGACCTTCCAAACCCAGACAATAGAAACTGTCCTGCTGTTACCCTGACAAGTCCTGCTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp ATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTCCACTCTAGAAACCCTGATAGCCTaGATGGCCAGAGGTCTCACT +
Preference number: 5 (lower is better)
Translates to: IKNHIAWATYLTSPLSTLETLIA*MARGLT
Trigger: AGTGAGACCTCTGGCCATCAAGGCTATCAGGGTTTC...TAGAGTGGAAAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp GAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCAGTCCAGAGGCTGATGGGATaGGTAAAGCTGTTGTCTCAA +
Preference number: 5 (lower is better)
Translates to: ETDSNQGKGGCHLSTLSVQRLMG*VKLLSQ
Trigger: TTGAGACAACAGCTTTACCAATCCCATCAGCCTCTG...GACTGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp CAATACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTTGAGGGCCGCTGCATaGGTTGTAGATGCGATGAGC +
Preference number: 5 (lower is better)
Translates to: QYNIKNHIAWATYLTSPLLRAAA*VVDAMS
Trigger: GCTCATCGCATCTACAACCAATGCAGCGGCCCTCAA...AAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp ATGGAAACAGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGGCCAGGCTTTCTGAGTaGGGAGAAAAAGGAGCATGT +
Preference number: 5 (lower is better)
Translates to: METAIPTSCIFLFLWCHQARLSE*GEKGAC
Trigger: ACATGCTCCTTTTTCTCCCAACTCAGAAAGCCTGGC...CTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCTGTTTCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp ATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGTGTGATTCTTTCTCTTCAGCCTaGGGATTTGCCTCAGGGGCC +
Preference number: 5 (lower is better)
Translates to: IPTSCIFLFLWCHQFECDSFSSA*GFASGA
Trigger: GGCCCCTGAGGCAAATCCCAAGGCTGAAGAGAAAGA...ATCACACTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS TCA 90 bp AATTTTGTTTCCATGGACACCAACCCACCAGGAAGAATGACTGACTaGCTTAAACTTGGGTTGAGACGTTCATTCCTCCCAATTCTGGCA +
Preference number: 5 (lower is better)
Translates to: NFVSMDTNPPGRMTD*LKLGLRRSFLPILA
Trigger: TGCCAGAATTGGGAGGAATGAACGTCTCAACCCAAGTTTAAGTCAGTCAGTCATTCTTCCTGGTGGGTTGGTGTCCATGGAAACAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CCA 90 bp AGGACTTGTCAGGGTAACAGCAGGACAGTTTCTATTGTCTGGGTTTaGAAGGTCCTTGGAGGAATCTCTCTTAGGAATAGACTTGATATC +
Preference number: 5 (lower is better)
Translates to: RTCQGNSRTVSIVWV*KVLGGISLRNRLDI
Trigger: GATATCAAGTCTATTCCTAAGAGAGATTCCTCCAAGGACCTTCCAAACCCAGACAATAGAAACTGTCCTGCTGTTACCCTGACAAGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp TGTGAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCACAGAGGCTGATGGGATaGGTAAAGCTGTTGTCTCAA +
Preference number: 5 (lower is better)
Translates to: CETDSNQGKGGCHLSTLSQRLMG*VKLLSQ
Trigger: TTGAGACAACAGCTTTACCAATCCCATCAGCCTCTG...TGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp ATGGAAACAGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGACTGCCATCATAGCTTaGTCCAGACTGACTGAAACG +
Preference number: 5 (lower is better)
Translates to: METAIPTSCIFLFLWCHQTAIIA*SRLTET
Trigger: CGTTTCAGTCAGTCTGGACAAAGCTATGATGGCAGT...CTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCTGTTTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp TGGAAACAGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTCTTGGTGGCAGCATTaGTGTACTGCATCACATGCT +
Preference number: 5 (lower is better)
Translates to: WKQPFQHLVSFFSCGVTSSWWQH*CTASHA
Trigger: AGCATGTGATGCAGTACACAAATGCTGCCACCAAGA...ACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCTGTTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp GAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCAGTCAGGAGCCTTCTGAGTTaGTACAGCTATCTGCTTTCT +
Preference number: 5 (lower is better)
Translates to: ETDSNQGKGGCHLSTLSVRSLLS*YSYLLS
Trigger: AGAAAGCAGATAGCTGTACAAACTCAGAAGGCTCCT...GACTGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp ATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTCCACTCTAGCAGGACAGTTTCTATaGTCTGGGTTTGGAAGGTCC +
Preference number: 5 (lower is better)
Translates to: IKNHIAWATYLTSPLSTLAGQFL*SGFGRS
Trigger: GGACCTTCCAAACCCAGACAATAGAAACTGTCCTGC...TAGAGTGGAAAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp TACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTCCTTTGCCTCTGCTTTTTaGGCTTTGGCTCCCCATCTG +
Preference number: 5 (lower is better)
Translates to: YNIKNHIAWATYLTSPLSFASAF*ALAPHL
Trigger: CAGATGGGGAGCCAAAGCCAAAAAAGCAGAGGCAAA...GGAAAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp TGGAAACAGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTGGATTGGTAAAGCTGTaGTCTCAACTGCTGTACTTG +
Preference number: 5 (lower is better)
Translates to: WKQPFQHLVSFFSCGVTSGLVKL*SQLLYL
Trigger: CAAGTACAGCAGTTGAGACAACAGCTTTACCAATCC...ACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCTGTTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp CCCACATTGTCACTATGGAGATTGTGTCCATGGAAACAGCCATTCCAACATCTTGTCTTTATACTCCTCTaGTTGCTGTTGGTACATCTG +
Preference number: 5 (lower is better)
Translates to: PTLSLWRLCPWKQPFQHLVFILL*LLLVHL
Trigger: CAGATGTACCAACAGCAACAAGAGGAGTATAAAGAC...AAGATGTTGGAATGGCTGTTTCCATGGACACAATCTCCATAGTGACAATGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp ATGGAAACAGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGCTTGATCTCTGGTTCTaGAGGTTCTACAATGGGAAC +
Preference number: 5 (lower is better)
Translates to: METAIPTSCIFLFLWCHQLDLWF*RFYNGN
Trigger: GTTCCCATTGTAGAACCTCAAGAACCAGAGATCAAG...CTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCTGTTTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp ATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGTGTGATACTGCCATCATAGCTTaGTCCAGACTGACTGAAACG +
Preference number: 5 (lower is better)
Translates to: IPTSCIFLFLWCHQFECDTAIIA*SRLTET
Trigger: CGTTTCAGTCAGTCTGGACAAAGCTATGATGGCAGT...ATCACACTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp ATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTCCACTCTAAGGAAGATTGGCCACTaGACTACTCAAAGCACTCAA +
Preference number: 5 (lower is better)
Translates to: IKNHIAWATYLTSPLSTLRKIGH*TTQSTQ
Trigger: TTGAGTGCTTTGAGTAGTCAAGTGGCCAATCTTCCT...TAGAGTGGAAAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp ATGGAAACAGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGCTTCCTGTAGAAGACTaGGGAACTTCTCATTTCTAC +
Preference number: 5 (lower is better)
Translates to: METAIPTSCIFLFLWCHQLPVED*GTSHFY
Trigger: GTAGAAATGAGAAGTTCCCAAGTCTTCTACAGGAAG...CTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCTGTTTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp TACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTCCTTCAATTCCATGCTTTaGGCAGGCAGACCATCACTA +
Preference number: 5 (lower is better)
Translates to: YNIKNHIAWATYLTSPLSFNSML*AGRPSL
Trigger: TAGTGATGGTCTGCCTGCCAAAAGCATGGAATTGAA...GGAAAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp ATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGTGTGATCGGCTCCTCACCAATTaGGTCTGTTCTTCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: IPTSCIFLFLWCHQFECDRLLTN*VCSSSS
Trigger: TGAAGAAGAAGAACAGACCAAATTGGTGAGGAGCCG...ATCACACTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp TGGAAACAGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTGTTTCTTTTGCTTATaGACACTACCGATTGGTCTC +
Preference number: 5 (lower is better)
Translates to: WKQPFQHLVSFFSCGVTSCFFCL*TLPIGL
Trigger: GAGACCAATCGGTAGTGTCAATAAGCAAAAGAAACA...ACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCTGTTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp CAATACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTACAATGGGAACTGCTaGTTTGGTTTTCCGCTTCCT +
Preference number: 5 (lower is better)
Translates to: QYNIKNHIAWATYLTSPLYNGNC*FGFPLP
Trigger: AGGAAGCGGAAAACCAAACAAGCAGTTCCCATTGTA...AAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp GAGACAGATTCTAACCAAGGGAAGGGTGGTTGTCATTTGTCTACTCTTTCAGTCTCTTCTTCTTCAGCATaGATGATTGTACAAACAGCT +
Preference number: 5 (lower is better)
Translates to: ETDSNQGKGGCHLSTLSVSSSSA*MIVQTA
Trigger: AGCTGTTTGTACAATCATCAATGCTGAAGAAGAAGA...GACTGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp ATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTCCACTCTATTTATACTCCTCTTGTaGCTGTTGGTACATCTGTCT +
Preference number: 5 (lower is better)
Translates to: IKNHIAWATYLTSPLSTLFILLL*LLVHLS
Trigger: AGACAGATGTACCAACAGCAACAAGAGGAGTATAAA...TAGAGTGGAAAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp ATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTCCACTCTAAGCTTGAGATTTGGATaGTTCAAAGTCTTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: IKNHIAWATYLTSPLSTLSLRFG*FKVFLF
Trigger: AAAGAGGAAGACTTTGAACAATCCAAATCTCAAGCT...TAGAGTGGAAAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS TCA 90 bp TGCCTGTTCAAAATTTTTCATAGACTGAGGTTGATAGCTATAATTTaGTTGTGTTCCATAAGCCTGTGCATTAGAACCCACATTATGCCC +
Preference number: 5 (lower is better)
Translates to: CLFKIFHRLRLIAII*LCSISLCIRTHIMP
Trigger: GGGCATAATGTGGGTTCTAATGCACAGGCTTATGGAACACAATCAAATTATAGCTATCAACCTCAGTCTATGAAAAATTTTGAACAGGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS-3UTR CAA 90 bp CAATACAACATAAAGAATCACATAGCATGGGCAACATATCTGACAAGTCCCCTTTCTTCTTCTTCAGCATaGATGATTGTACAAACAGCT +
Preference number: 5 (lower is better)
Translates to: QYNIKNHIAWATYLTSPLSSSSA*MIVQTA
Trigger: AGCTGTTTGTACAATCATCAATGCTGAAGAAGAAGA...AAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGTTGTATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS TCA 72 bp CCTGGACAGGGACCGAGGACCTCCACCACAGTCTTCTaGGCGGTGGCGCCGCTTGAACCTAGGATGAGCAGC +
Preference number: 6 (lower is better)
Translates to: PGQGPRTSTTVF*AVAPLEPRMSS
Trigger: GCTGCTCATCCTAGGTTCAAGCGGCGCCACCGCTCAGAAGACTGTGGTGGAGGTCCTCGGTCCCTGTCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS GCA 72 bp CTGCCGCTGCAGCAGCTGTTCCTCGTCGACCGCTACTaGTGCTGCCAGTGCCACTACTACCACCACCTGCTC +
Preference number: 6 (lower is better)
Translates to: LPLQQLFLVDRY*CCQCHYYHHLL
Trigger: GAGCAGGTGGTGGTAGTAGTGGCACTGGCAGCAGCAGTAGCGGTCGACGAGGAACAGCTGCTGCAGCGGCAG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
ENSMUST00000229547.2
ENSMUST00000230403.2
CDS CAA 90 bp AGGGGGCTCCGTACTCTGTCAAGAAACTGCTGCTGCCTTGGGCTCTaGCGTGGGCCTTCCTGCCTATGCTGCGCAGCAGCGATCACTCCC +
Preference number: 6 (lower is better)
Translates to: RGLRTLSRNCCCLGL*RGPSCLCCAAAITP
Trigger: GGGAGTGATCGCTGCTGCGCAGCATAGGCAGGAAGGCCCACGCAAGAGCCCAAGGCAGCAGCAGTTTCTTGACAGAGTACGGAGCCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CCA 72 bp GGGGCTCCGTACTCTGTCAAGAAACTGCTGCTGCCTTaGGCTCTTGCGTGGGCCTTCCTGCCTATGCTGCGC +
Preference number: 6 (lower is better)
Translates to: GAPYSVKKLLLP*ALAWAFLPMLR
Trigger: GCGCAGCATAGGCAGGAAGGCCCACGCAAGAGCCCAAGGCAGCAGCAGTTTCTTGACAGAGTACGGAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS TCA 72 bp CTGGGCCTGGCGAGGGCTGAACTCTTCTATGCGGGATaGGCTGTGCACCTCCTGTGGGTAGCTCTGCTGGTT +
Preference number: 6 (lower is better)
Translates to: LGLARAELFYAG*AVHLLWVALLV
Trigger: AACCAGCAGAGCTACCCACAGGAGGTGCACAGCTCATCCCGCATAGAAGAGTTCAGCCCTCGCCAGGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
ENSMUST00000229439.2
ENSMUST00000229547.2
ENSMUST00000230403.2
CDS CCA 72 bp AGGATGAAGCTGGGAGCACCTTGCTTTCTGTGCTGCTaGGGGGAGGGGTCAGAGATCTCTGACCCTTCCGGC +
Preference number: 6 (lower is better)
Translates to: RMKLGAPCFLCC*GEGSEISDPSG
Trigger: GCCGGAAGGGTCAGAGATCTCTGACCCCTCCCCCCAGCAGCACAGAAAGCAAGGTGCTCCCAGCTTCATCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS GCA 72 bp TTGATGGCCAGAGGTCTCACTAGCCATTGCTGCCGCTaGAGCAGCTGTTCCTCGTCGACCGCTACTGCTGCT +
Preference number: 6 (lower is better)
Translates to: LMARGLTSHCCR*SSCSSSTATAA
Trigger: AGCAGCAGTAGCGGTCGACGAGGAACAGCTGCTGCAGCGGCAGCAATGGCTAGTGAGACCTCTGGCCATCAA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
ENSMUST00000229547.2
ENSMUST00000230403.2
CDS GCA 72 bp CTGATAGCCTTGATGGCCAGAGGTCTCACTAGCCATTaGTGCCGCTGCAGCAGCTGTTCCTCGTCGACCGCT +
Preference number: 6 (lower is better)
Translates to: LIALMARGLTSH*CRCSSCSSSTA
Trigger: AGCGGTCGACGAGGAACAGCTGCTGCAGCGGCAGCAATGGCTAGTGAGACCTCTGGCCATCAAGGCTATCAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
ENSMUST00000229547.2
ENSMUST00000230403.2
CDS GCA 72 bp GCTAGGCTCAGTCCTGCCTGTGAAACTTGGGCCTACTaGGGAGTGGCTACTCGGGCCATTCCCCTCTCCATT +
Preference number: 6 (lower is better)
Translates to: ARLSPACETWAY*GVATRAIPLSI
Trigger: AATGGAGAGGGGAATGGCCCGAGTAGCCACTCCGCAGTAGGCCCAAGTTTCACAGGCAGGACTGAGCCTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS GCA 72 bp TTCAGGGGGCTCCGTACTCTGTCAAGAAACTGCTGCTaGCTTGGGCTCTTGCGTGGGCCTTCCTGCCTATGC +
Preference number: 6 (lower is better)
Translates to: FRGLRTLSRNCC*LGLLRGPSCLC
Trigger: GCATAGGCAGGAAGGCCCACGCAAGAGCCCAAGGCAGCAGCAGTTTCTTGACAGAGTACGGAGCCCCCTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CCA 72 bp AGGAGACTTGCTAGGCTCAGTCCTGCCTGTGAAACTTaGGCCTACTGCGGAGTGGCTACTCGGGCCATTCCC +
Preference number: 6 (lower is better)
Translates to: RRLARLSPACET*AYCGVATRAIP
Trigger: GGGAATGGCCCGAGTAGCCACTCCGCAGTAGGCCCAAGTTTCACAGGCAGGACTGAGCCTAGCAAGTCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CCA 72 bp TCTGTCAAGAAACTGCTGCTGCCTTGGGCTCTTGCGTaGGCCTTCCTGCCTATGCTGCGCAGCAGCGATCAC +
Preference number: 6 (lower is better)
Translates to: SVKKLLLPWALA*AFLPMLRSSDH
Trigger: GTGATCGCTGCTGCGCAGCATAGGCAGGAAGGCCCACGCAAGAGCCCAAGGCAGCAGCAGTTTCTTGACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CAA 72 bp CACATGCTGGGGAGGATGTTGCTGCTGCTGCTGCTGTaGCTGCTGTTGCTGCGGCTGCTGTTGCTGAGGTTG +
Preference number: 6 (lower is better)
Translates to: HMLGRMLLLLLL*LLLLRLLLLRL
Trigger: CAACCTCAGCAACAGCAGCCGCAGCAACAGCAGCAACAGCAGCAGCAGCAGCAACATCCTCCCCAGCATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CAA 72 bp TCTCCCGGCTACCAACTCTACCAGGGACCCGCCGCATaGGTGTGGACCTGCTATCTTGTGGGCCATAGTCTG +
Preference number: 6 (lower is better)
Translates to: SPGYQLYQGPAA*VWTCYLVGHSL
Trigger: CAGACTATGGCCCACAAGATAGCAGGTCCACACCAATGCGGCGGGTCCCTGGTAGAGTTGGTAGCCGGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CAA 90 bp CATTTTTCAGGGGGCTCCGTACTCTGTCAAGAAACTGCTGCTGCCTaGGGCTCTTGCGTGGGCCTTCCTGCCTATGCTGCGCAGCAGCGA +
Preference number: 6 (lower is better)
Translates to: HFSGGSVLCQETAAA*GSCVGLPAYAAQQR
Trigger: TCGCTGCTGCGCAGCATAGGCAGGAAGGCCCACGCAAGAGCCCAAGGCAGCAGCAGTTTCTTGACAGAGTACGGAGCCCCCTGAAAAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CAA 90 bp GTACTGCATCACATGCTGGGGAGGATGTTGCTGCTGCTGCTGCTGTaGCTGCTGTTGCTGCGGCTGCTGTTGCTGAGGTTGTGGTTGCTG +
Preference number: 6 (lower is better)
Translates to: VLHHMLGRMLLLLLL*LLLLRLLLLRLWLL
Trigger: CAGCAACCACAACCTCAGCAACAGCAGCCGCAGCAACAGCAGCAACAGCAGCAGCAGCAGCAACATCCTCCCCAGCATGTGATGCAGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS GCA 72 bp CAGCTGTTCCTCGTCGACCGCTACTGCTGCTGCCAGTaGCACTACTACCACCACCTGCTCCCCCAAAATTCT +
Preference number: 6 (lower is better)
Translates to: QLFLVDRYCCCQ*HYYHHLLPQNS
Trigger: AGAATTTTGGGGGAGCAGGTGGTGGTAGTAGTGGCACTGGCAGCAGCAGTAGCGGTCGACGAGGAACAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
ENSMUST00000229547.2
ENSMUST00000230403.2
CDS GCA 72 bp ATAGCCTTGATGGCCAGAGGTCTCACTAGCCATTGCTaGCGCTGCAGCAGCTGTTCCTCGTCGACCGCTACT +
Preference number: 6 (lower is better)
Translates to: IALMARGLTSHC*RCSSCSSSTAT
Trigger: AGTAGCGGTCGACGAGGAACAGCTGCTGCAGCGGCAGCAATGGCTAGTGAGACCTCTGGCCATCAAGGCTAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
ENSMUST00000229547.2
ENSMUST00000230403.2
CDS GCA 72 bp CCCAGAAGGCCTTCGCTGAGGAGGCTGTGGGGTTCCTaGTGCCACTGTGTCTTTGTTGCCTGCCATGTAGTA +
Preference number: 6 (lower is better)
Translates to: PRRPSLRRLWGS*CHCVFVACHVV
Trigger: TACTACATGGCAGGCAACAAAGACACAGTGGCAGCAGGAACCCCACAGCCTCCTCAGCGAAGGCCTTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
ENSMUST00000229547.2
ENSMUST00000230403.2
CDS GCA 72 bp GTGTACTGCATCACATGCTGGGGAGGATGTTGCTGCTaGTGCTGCTGTTGCTGCTGTTGCTGCGGCTGCTGT +
Preference number: 6 (lower is better)
Translates to: VYCITCWGGCCC*CCCCCCCCGCC
Trigger: ACAGCAGCCGCAGCAACAGCAGCAACAGCAGCAGCAGCAGCAACATCCTCCCCAGCATGTGATGCAGTACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CCA 72 bp CCACCTGCTCCCCCAAAATTCTGGAACATCTGGGCCTaGCGAGGGCTGAACTCTTCTATGCGGGATGAGCTG +
Preference number: 6 (lower is better)
Translates to: PPAPPKFWNIWA*RGLNSSMRDEL
Trigger: CAGCTCATCCCGCATAGAAGAGTTCAGCCCTCGCCAGGCCCAGATGTTCCAGAATTTTGGGGGAGCAGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
ENSMUST00000229547.2
ENSMUST00000230403.2
CDS CAA 72 bp CTGCTGCTGTTGCTGCTGCTGCTGCTGCTGCTGTTGTaGGCTAGAGGCCTGCTGTTGATACTGAGCACTCCC +
Preference number: 6 (lower is better)
Translates to: LLLLLLLLLLLL*ARGLLLILSTP
Trigger: GGGAGTGCTCAGTATCAACAGCAGGCCTCTAGCCAACAACAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS TCA 72 bp CCCCAAAATTCTGGAACATCTGGGCCTGGCGAGGGCTaGACTCTTCTATGCGGGATGAGCTGTGCACCTCCT +
Preference number: 6 (lower is better)
Translates to: PQNSGTSGPGEG*TLLCGMSCAPP
Trigger: AGGAGGTGCACAGCTCATCCCGCATAGAAGAGTTCAGCCCTCGCCAGGCCCAGATGTTCCAGAATTTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
ENSMUST00000229547.2
ENSMUST00000230403.2
CDS TCA 72 bp CCTTCCTGCCTATGCTGCGCAGCAGCGATCACTCCCTaGGCAGAACTGCTGGCCCAGTCTTTATACTCCTCT +
Preference number: 6 (lower is better)
Translates to: PSCLCCAAAITP*AELLAQSLYSS
Trigger: AGAGGAGTATAAAGACTGGGCCAGCAGTTCTGCTCAGGGAGTGATCGCTGCTGCGCAGCATAGGCAGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS GCA 72 bp TCACATGACCCTCACTCGCATACTGATTGCCAAAGCTaGTCCCCTGGGGAGGTCCATAGCTCTGTACAGGCC +
Preference number: 6 (lower is better)
Translates to: SHDPHSHTDCQS*SPGEVHSSVQA
Trigger: GGCCTGTACAGAGCTATGGACCTCCCCAGGGGAGCAGCTTTGGCAATCAGTATGCGAGTGAGGGTCATGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
ENSMUST00000229547.2
CDS GCA 72 bp GATGGCAGAGTTGAGGGCCGCTGCATTGGTTGTAGATaGGATGAGCCAGAGGCTGGCTGTCCAGTGGTTTGT +
Preference number: 6 (lower is better)
Translates to: DGRVEGRCIGCR*DEPEAGCPVVC
Trigger: ACAAACCACTGGACAGCCAGCCTCTGGCTCATCGCATCTACAACCAATGCAGCGGCCCTCAACTCTGCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS GCA 72 bp TTTTTCAGGGGGCTCCGTACTCTGTCAAGAAACTGCTaGTGCCTTGGGCTCTTGCGTGGGCCTTCCTGCCTA +
Preference number: 6 (lower is better)
Translates to: FFRGLRTLSRNC*CLGLLRGPSCL
Trigger: TAGGCAGGAAGGCCCACGCAAGAGCCCAAGGCAGCAGCAGTTTCTTGACAGAGTACGGAGCCCCCTGAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS GCA 72 bp TCATTTTTCAGGGGGCTCCGTACTCTGTCAAGAAACTaGTGCTGCCTTGGGCTCTTGCGTGGGCCTTCCTGC +
Preference number: 6 (lower is better)
Translates to: SFFRGLRTLSRN*CCLGLLRGPSC
Trigger: GCAGGAAGGCCCACGCAAGAGCCCAAGGCAGCAGCAGTTTCTTGACAGAGTACGGAGCCCCCTGAAAAATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS GCA 72 bp TGGCGATTTCCAGCGCTTCCTGCAGGCCATAGAGCCTaGCACAGACCAGGTAGATTCCATTGGCCCAGAGAA +
Preference number: 6 (lower is better)
Translates to: WRFPALPAGHRA*HRPGRFHWPRE
Trigger: TTCTCTGGGCCAATGGAATCTACCTGGTCTGTGGCAGGCTCTATGGCCTGCAGGAAGCGCTGGAAATCGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CCA 72 bp CTACCACCACCTGCTCCCCCAAAATTCTGGAACATCTaGGCCTGGCGAGGGCTGAACTCTTCTATGCGGGAT +
Preference number: 6 (lower is better)
Translates to: LPPPAPPKFWNI*AWRGLNSSMRD
Trigger: ATCCCGCATAGAAGAGTTCAGCCCTCGCCAGGCCCAGATGTTCCAGAATTTTGGGGGAGCAGGTGGTGGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
ENSMUST00000229547.2
ENSMUST00000230403.2
CDS CAA 72 bp CTGCTGCTGCTGTTGCTGCTGCTGCTGCTGCTGCTGTaGTTGGCTAGAGGCCTGCTGTTGATACTGAGCACT +
Preference number: 6 (lower is better)
Translates to: LLLLLLLLLLLL*LARGLLLILST
Trigger: AGTGCTCAGTATCAACAGCAGGCCTCTAGCCAACAACAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS GCA 72 bp GGCATCTTGGTGGCAGCATTTGTGTACTGCATCACATaGTGGGGAGGATGTTGCTGCTGCTGCTGCTGTTGC +
Preference number: 6 (lower is better)
Translates to: GILVAAFVYCIT*WGGCCCCCCCC
Trigger: GCAACAGCAGCAGCAGCAGCAACATCCTCCCCAGCATGTGATGCAGTACACAAATGCTGCCACCAAGATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CAA 90 bp GGATTGGTAAAGCTGTTGTCTCAACTGCTGTACTTGCTGCTGCTGTaGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTGCTGCTGCTGTTG +
Preference number: 6 (lower is better)
Translates to: GLVKLLSQLLYLLLL*LLLLLLLLLLLLLL
Trigger: CAACAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAACAGCAGCAGCAAGTACAGCAGTTGAGACAACAGCTTTACCAATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CAA 90 bp CAGAGGCTGATGGGATTGGTAAAGCTGTTGTCTCAACTGCTGTACTaGCTGCTGCTGTTGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: QRLMGLVKLLSQLLY*LLLLLLLLLLLLLL
Trigger: CAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAACAGCAGCAGCAAGTACAGCAGTTGAGACAACAGCTTTACCAATCCCATCAGCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS TCA 72 bp CCAATTCTGGCATCAGTACCCATGTGTCCCAATGAGTaGGCCCCTGGGTCCCTGACAATCTGTCTTAGTGGG +
Preference number: 6 (lower is better)
Translates to: PILASVPMCPNE*APGSLTICLSG
Trigger: CCCACTAAGACAGATTGTCAGGGACCCAGGGGCTCACTCATTGGGACACATGGGTACTGATGCCAGAATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS TCA 72 bp ACCACCTCACACTTTCGCTTTTCCATCTCAGCCTCTTaGGTAGCCACAGTGCCACCTTCAGGAGGACCACTC +
Preference number: 6 (lower is better)
Translates to: TTSHFRFSISAS*VATVPPSGGPL
Trigger: GAGTGGTCCTCCTGAAGGTGGCACTGTGGCTACTCAAGAGGCTGAGATGGAAAAGCGAAAGTGTGAGGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS GCA 72 bp GTGGGTTCATGTGATGAGGGTCTCCCCCTGGGCCTCTaGTCCTGCCTGGAGACATCTTCAATTTTTCTGCAA +
Preference number: 6 (lower is better)
Translates to: VGSCDEGLPLGL*SCLETSSIFLQ
Trigger: TTGCAGAAAAATTGAAGATGTCTCCAGGCAGGAGCAGAGGCCCAGGGGGAGACCCTCATCACATGAACCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CCA 72 bp GCCATCATAGCTTTGTCCAGACTGACTGAAACGCTGTaGAGAAGGGAAGGAGGAGGAGGAAGAGGAGGAAGC +
Preference number: 6 (lower is better)
Translates to: AIIALSRLTETL*RREGGGGRGGS
Trigger: GCTTCCTCCTCTTCCTCCTCCTCCTTCCCTTCTCCACAGCGTTTCAGTCAGTCTGGACAAAGCTATGATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CCA 72 bp ATCTTGGTGGCAGCATTTGTGTACTGCATCACATGCTaGGGAGGATGTTGCTGCTGCTGCTGCTGTTGCTGC +
Preference number: 6 (lower is better)
Translates to: ILVAAFVYCITC*GGCCCCCCCCC
Trigger: GCAGCAACAGCAGCAGCAGCAGCAACATCCTCCCCAGCATGTGATGCAGTACACAAATGCTGCCACCAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CCA 72 bp TGTACTGCCCAACCTGGCTTTGCAGAGGCATCTTGGTaGCAGCATTTGTGTACTGCATCACATGCTGGGGAG +
Preference number: 6 (lower is better)
Translates to: CTAQPGFAEASW*QHLCTASHAGE
Trigger: CTCCCCAGCATGTGATGCAGTACACAAATGCTGCCACCAAGATGCCTCTGCAAAGCCAGGTTGGGCAGTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CCA 72 bp GGTTGTACTGCCCAACCTGGCTTTGCAGAGGCATCTTaGTGGCAGCATTTGTGTACTGCATCACATGCTGGG +
Preference number: 6 (lower is better)
Translates to: GCTAQPGFAEAS*WQHLCTASHAG
Trigger: CCCAGCATGTGATGCAGTACACAAATGCTGCCACCAAGATGCCTCTGCAAAGCCAGGTTGGGCAGTACAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CCA 72 bp AAAAGGGTCCAAAGAGGTCACCCATGTTACGGTAACTaGCCCACTTGCCACAGAGACAGCAAACCAGGTGCC +
Preference number: 6 (lower is better)
Translates to: KRVQRGHPCYGN*PTCHRDSKPGA
Trigger: GGCACCTGGTTTGCTGTCTCTGTGGCAAGTGGGCCAGTTACCGTAACATGGGTGACCTCTTTGGACCCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CAA 72 bp AGGCCTTGCAGTTCCTTCCAGGCCACTAGCCATCCCTaGATGTTCCTGTGCGCTTCTAGGATACCTTCTGTC +
Preference number: 6 (lower is better)
Translates to: RPCSSFQATSHP*MFLCASRIPSV
Trigger: GACAGAAGGTATCCTAGAAGCGCACAGGAACATCAAGGGATGGCTAGTGGCCTGGAAGGAACTGCAAGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CAA 90 bp CTGTCCAGTGGTTTGTGGCAGAGGCTGATGGGATTGGTAAAGCTGTaGTCTCAACTGCTGTACTTGCTGCTGCTGTTGCTGCTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: LSSGLWQRLMGLVKL*SQLLYLLLLLLLLL
Trigger: CAGCAGCAGCAGCAACAGCAGCAGCAAGTACAGCAGTTGAGACAACAGCTTTACCAATCCCATCAGCCTCTGCCACAAACCACTGGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CAA 90 bp TGGTCTCTGACTGGCAGCAGGATCATCCTCCTGGGAGCCTTTATCTaGTCCACCAGATTTTTCTACCCGACCTGTCATGGCTTCTCGGGA +
Preference number: 6 (lower is better)
Translates to: WSLTGSRIILLGAFI*STRFFYPTCHGFSG
Trigger: TCCCGAGAAGCCATGACAGGTCGGGTAGAAAAATCTGGTGGACAAGATAAAGGCTCCCAGGAGGATGATCCTGCTGCCAGTCAGAGACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CAA 90 bp TGGGATTTGCCTCAGGGGCCAATATGCCCACTGGAGCTACATTCTTaGAGTCAGGAAAGATTAGTGGTGCTGCCCCACCCAGGGAACCAT +
Preference number: 6 (lower is better)
Translates to: WDLPQGPICPLELHS*SQERLVVLPHPGNH
Trigger: ATGGTTCCCTGGGTGGGGCAGCACCACTAATCTTTCCTGACTCAAAGAATGTAGCTCCAGTGGGCATATTGGCCCCTGAGGCAAATCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS TCA 72 bp CATTGGTGTGGACCTGCTATCTTGTGGGCCATAGTCTaGAATGGAATCATGGGCTGCTGCTCCAGGACTTGC +
Preference number: 6 (lower is better)
Translates to: HWCGPAILWAIV*NGIMGCCSRTC
Trigger: GCAAGTCCTGGAGCAGCAGCCCATGATTCCATTTCAGACTATGGCCCACAAGATAGCAGGTCCACACCAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS GCA 72 bp CAACTCTACCAGGGACCCGCCGCATTGGTGTGGACCTaGTATCTTGTGGGCCATAGTCTGAAATGGAATCAT +
Preference number: 6 (lower is better)
Translates to: QLYQGPAALVWT*YLVGHSLKWNH
Trigger: ATGATTCCATTTCAGACTATGGCCCACAAGATAGCAGGTCCACACCAATGCGGCGGGTCCCTGGTAGAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS GCA 72 bp TATGCTGCGCAGCAGCGATCACTCCCTGAGCAGAACTaGTGGCCCAGTCTTTATACTCCTCTTGTTGCTGTT +
Preference number: 6 (lower is better)
Translates to: YAAQQRSLPEQN*WPSLYTPLVAV
Trigger: AACAGCAACAAGAGGAGTATAAAGACTGGGCCAGCAGTTCTGCTCAGGGAGTGATCGCTGCTGCGCAGCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS GCA 72 bp TGCCCCATAACAGAAGACTCTGTTACCACAGGCCCCTaGAGCATAAAGGATGAAGCTGGGAGCACCTTGCTT +
Preference number: 6 (lower is better)
Translates to: CPITEDSVTTGP*SIKDEAGSTLL
Trigger: AAGCAAGGTGCTCCCAGCTTCATCCTTTATGCTGCAGGGGCCTGTGGTAACAGAGTCTTCTGTTATGGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CCA 72 bp TGTGTGGCTGATTTCCTTTACGCCACTATTGCTAGGTaGTCTCTGACTGGCAGCAGGATCATCCTCCTGGGA +
Preference number: 6 (lower is better)
Translates to: CVADFLYATIAR*SLTGSRIILLG
Trigger: TCCCAGGAGGATGATCCTGCTGCCAGTCAGAGACCACCTAGCAATAGTGGCGTAAAGGAAATCAGCCACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CCA 72 bp CCTCCTCCTGGAGGATCTGGCTGTGGAAGTGATGTGTaGCTGATTTCCTTTACGCCACTATTGCTAGGTGGT +
Preference number: 6 (lower is better)
Translates to: PPPGGSGCGSDV*LISFTPLLLGG
Trigger: ACCACCTAGCAATAGTGGCGTAAAGGAAATCAGCCACACATCACTTCCACAGCCAGATCCTCCAGGAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CCA 72 bp GTGTGGACCTGCTATCTTGTGGGCCATAGTCTGAAATaGAATCATGGGCTGCTGCTCCAGGACTTGCATTGC +
Preference number: 6 (lower is better)
Translates to: VWTCYLVGHSLK*NHGLLLQDLHC
Trigger: GCAATGCAAGTCCTGGAGCAGCAGCCCATGATTCCATTTCAGACTATGGCCCACAAGATAGCAGGTCCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CCA 72 bp ACTAGACATGAGACAGCGCCCAGCTTCCTGAGTGCTTaGGTCATGATACGTACCTACTGGTGGGCCATACAT +
Preference number: 6 (lower is better)
Translates to: TRHETAPSFLSA*VMIRTYWWAIH
Trigger: ATGTATGGCCCACCAGTAGGTACGTATCATGACCCAAGCACTCAGGAAGCTGGGCGCTGTCTCATGTCTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CAA 72 bp AGACACACCACCAAGGGCAGAGTGCTGTGCTTGAAATaGGCTCACATGACCCTCACTCGCATACTGATTGCC +
Preference number: 6 (lower is better)
Translates to: RHTTKGRVLCLK*AHMTLTRILIA
Trigger: GGCAATCAGTATGCGAGTGAGGGTCATGTGAGCCAATTTCAAGCACAGCACTCTGCCCTTGGTGGTGTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
ENSMUST00000229547.2
CDS CAA 72 bp TGGTTGTACTGCCCAACCTGGCTTTGCAGAGGCATCTaGGTGGCAGCATTTGTGTACTGCATCACATGCTGG +
Preference number: 6 (lower is better)
Translates to: WLYCPTWLCRGI*VAAFVYCITCW
Trigger: CCAGCATGTGATGCAGTACACAAATGCTGCCACCAAGATGCCTCTGCAAAGCCAGGTTGGGCAGTACAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CAA 72 bp ACTGGCAGCAGGATCATCCTCCTGGGAGCCTTTATCTaGTCCACCAGATTTTTCTACCCGACCTGTCATGGC +
Preference number: 6 (lower is better)
Translates to: TGSRIILLGAFI*STRFFYPTCHG
Trigger: GCCATGACAGGTCGGGTAGAAAAATCTGGTGGACAAGATAAAGGCTCCCAGGAGGATGATCCTGCTGCCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CAA 72 bp GATCTCTGGTTCTTGAGGTTCTACAATGGGAACTGCTaGTTTGGTTTTCCGCTTCCTTGGCTGGGCCCCAGG +
Preference number: 6 (lower is better)
Translates to: DLWFLRFYNGNC*FGFPLPWLGPR
Trigger: CCTGGGGCCCAGCCAAGGAAGCGGAAAACCAAACAAGCAGTTCCCATTGTAGAACCTCAAGAACCAGAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CAA 90 bp CATGTAGTAAAAATCTCCAGCTTCTTTCCTGAAACCCTGATAGCCTaGATGGCCAGAGGTCTCACTAGCCATTGCTGCCGCTGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: HVVKISSFFPETLIA*MARGLTSHCCRCSS
Trigger: GCTGCTGCAGCGGCAGCAATGGCTAGTGAGACCTCTGGCCATCAAGGCTATCAGGGTTTCAGGAAAGAAGCTGGAGATTTTTACTACATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
ENSMUST00000229547.2
ENSMUST00000230403.2
CDS CAA 90 bp TGTCAGGATGGTGGTGGTAGCCCTGAAGCACTTCCTGTAGAAGACTaGGGAACTTCTCATTTCTACCCTTTCGCTCTCCATGGCTGCCAA +
Preference number: 6 (lower is better)
Translates to: CQDGGGSPEALPVED*GTSHFYPFALHGCQ
Trigger: TTGGCAGCCATGGAGAGCGAAAGGGTAGAAATGAGAAGTTCCCAAGTCTTCTACAGGAAGTGCTTCAGGGCTACCACCACCATCCTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS TCA 72 bp GTGCTCTGGCCACTCAGTTGCCTCACCCTCTCACCTTaGTCTTCTGAACTACTAGAGCAACCTCCATCCAAT +
Preference number: 6 (lower is better)
Translates to: VLWPLSCLTLSP*SSELLEQPPSN
Trigger: ATTGGATGGAGGTTGCTCTAGTAGTTCAGAAGATCAAGGTGAGAGGGTGAGGCAACTGAGTGGCCAGAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS TCA 72 bp CTGATTTCCTTTACGCCACTATTGCTAGGTGGTCTCTaGCTGGCAGCAGGATCATCCTCCTGGGAGCCTTTA +
Preference number: 6 (lower is better)
Translates to: LISFTPLLLGGL*LAAGSSSWEPL
Trigger: TAAAGGCTCCCAGGAGGATGATCCTGCTGCCAGTCAGAGACCACCTAGCAATAGTGGCGTAAAGGAAATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CCA 72 bp GGTTGTGGTTGCTGCTGTTGCTGCTGCTGCCCCTGCTaGTTTCCTGGTGGAATCTTTGCCTGTTCAAAATTT +
Preference number: 6 (lower is better)
Translates to: GCGCCCCCCCPC*FPGGIFACSKF
Trigger: AAATTTTGAACAGGCAAAGATTCCACCAGGAAACCAGCAGGGGCAGCAGCAGCAACAGCAGCAACCACAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CCA 72 bp GCTGTGCTGCTTGACTTCCTTTCCCATGGTCCCCAGTaGGGATTTTCCAACAGGGATCCAATACTCTTGTTC +
Preference number: 6 (lower is better)
Translates to: AVLLDFLSHGPQ*GFSNRDPILLF
Trigger: GAACAAGAGTATTGGATCCCTGTTGGAAAATCCCCACTGGGGACCATGGGAAAGGAAGTCAAGCAGCACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CCA 72 bp GGCCATAGAGCCTGCCACAGACCAGGTAGATTCCATTaGCCCAGAGAATACAACCCTCATGGACCCAAAATT +
Preference number: 6 (lower is better)
Translates to: GHRACHRPGRFH*PREYNPHGPKI
Trigger: AATTTTGGGTCCATGAGGGTTGTATTCTCTGGGCCAATGGAATCTACCTGGTCTGTGGCAGGCTCTATGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CAA 72 bp ATGGGATTGGTAAAGCTGTTGTCTCAACTGCTGTACTaGCTGCTGCTGTTGCTGCTGCTGCTGCTGTTGCTG +
Preference number: 6 (lower is better)
Translates to: MGLVKLLSQLLY*LLLLLLLLLLL
Trigger: CAGCAACAGCAGCAGCAGCAGCAACAGCAGCAGCAAGTACAGCAGTTGAGACAACAGCTTTACCAATCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CAA 72 bp TGGCTGTCCAGTGGTTTGTGGCAGAGGCTGATGGGATaGGTAAAGCTGTTGTCTCAACTGCTGTACTTGCTG +
Preference number: 6 (lower is better)
Translates to: WLSSGLWQRLMG*VKLLSQLLYLL
Trigger: CAGCAAGTACAGCAGTTGAGACAACAGCTTTACCAATCCCATCAGCCTCTGCCACAAACCACTGGACAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CAA 90 bp CTGATAATGAGACACACCACCAAGGGCAGAGTGCTGTGCTTGAAATaGGCTCACATGACCCTCACTCGCATACTGATTGCCAAAGCTGCT +
Preference number: 6 (lower is better)
Translates to: LIMRHTTKGRVLCLK*AHMTLTRILIAKAA
Trigger: AGCAGCTTTGGCAATCAGTATGCGAGTGAGGGTCATGTGAGCCAATTTCAAGCACAGCACTCTGCCCTTGGTGGTGTGTCTCATTATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
ENSMUST00000229547.2
CDS CAA 90 bp TGGGGCATTAGCTGTAAAATTCGGTTTCTGGAACTCATGGGCACATaGCCTTGCCCACACTGGAGATTCTCACCACTCTGCATGAGAGGA +
Preference number: 6 (lower is better)
Translates to: WGISCKIRFLELMGT*PCPHWRFSPLCMRG
Trigger: TCCTCTCATGCAGAGTGGTGAGAATCTCCAGTGTGGGCAAGGCAATGTGCCCATGAGTTCCAGAAACCGAATTTTACAGCTAATGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CAA 90 bp CTTGGGCCTACTGCGGAGTGGCTACTCGGGCCATTCCCCTCTCCATaGTGGTTAGAGCTATTATTATCACCATTCTTGTTTCCTTTGCTC +
Preference number: 6 (lower is better)
Translates to: LGPTAEWLLGPFPSP*WLELLLSPFLFPLL
Trigger: GAGCAAAGGAAACAAGAATGGTGATAATAATAGCTCTAACCACAATGGAGAGGGGAATGGCCCGAGTAGCCACTCCGCAGTAGGCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS GCA 72 bp CTGATAATGAGACACACCACCAAGGGCAGAGTGCTGTaGTTGAAATTGGCTCACATGACCCTCACTCGCATA +
Preference number: 6 (lower is better)
Translates to: LIMRHTTKGRVL*LKLAHMTLTRI
Trigger: TATGCGAGTGAGGGTCATGTGAGCCAATTTCAAGCACAGCACTCTGCCCTTGGTGGTGTGTCTCATTATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
ENSMUST00000229547.2
CDS GCA 72 bp GCTGTAAAATTCGGTTTCTGGAACTCATGGGCACATTaGCTTGCCCACACTGGAGATTCTCACCACTCTGCA +
Preference number: 6 (lower is better)
Translates to: AVKFGFWNSWAH*LAHTGDSHHSA
Trigger: TGCAGAGTGGTGAGAATCTCCAGTGTGGGCAAGGCAATGTGCCCATGAGTTCCAGAAACCGAATTTTACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS GCA 72 bp CAGTGTGACTGTGTCTCCCCCAGCCTCAGCACTGTTTaGAGATGCACTCCTCCTAATATTTGGAGATGTGAT +
Preference number: 6 (lower is better)
Translates to: QCDCVSPSLSTV*RCTPPNIWRCD
Trigger: ATCACATCTCCAAATATTAGGAGGAGTGCATCTGCAAACAGTGCTGAGGCTGGGGGAGACACAGTCACACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CAA 72 bp ATAATGAGACACACCACCAAGGGCAGAGTGCTGTGCTaGAAATTGGCTCACATGACCCTCACTCGCATACTG +
Preference number: 6 (lower is better)
Translates to: IMRHTTKGRVLC*KLAHMTLTRIL
Trigger: CAGTATGCGAGTGAGGGTCATGTGAGCCAATTTCAAGCACAGCACTCTGCCCTTGGTGGTGTGTCTCATTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
ENSMUST00000229547.2
CDS CAA 72 bp AGCTGTAAAATTCGGTTTCTGGAACTCATGGGCACATaGCCTTGCCCACACTGGAGATTCTCACCACTCTGC +
Preference number: 6 (lower is better)
Translates to: SCKIRFLELMGT*PCPHWRFSPLC
Trigger: GCAGAGTGGTGAGAATCTCCAGTGTGGGCAAGGCAATGTGCCCATGAGTTCCAGAAACCGAATTTTACAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CAA 72 bp GGTGGTGGTAGCCCTGAAGCACTTCCTGTAGAAGACTaGGGAACTTCTCATTTCTACCCTTTCGCTCTCCAT +
Preference number: 6 (lower is better)
Translates to: GGGSPEALPVED*GTSHFYPFALH
Trigger: ATGGAGAGCGAAAGGGTAGAAATGAGAAGTTCCCAAGTCTTCTACAGGAAGTGCTTCAGGGCTACCACCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CAA 72 bp GCAGGACTTGTCAGGGTAACAGCAGGACAGTTTCTATaGTCTGGGTTTGGAAGGTCCTTGGAGGAATCTCTC +
Preference number: 6 (lower is better)
Translates to: AGLVRVTAGQFL*SGFGRSLEESL
Trigger: GAGAGATTCCTCCAAGGACCTTCCAAACCCAGACAATAGAAACTGTCCTGCTGTTACCCTGACAAGTCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CAA 90 bp ATCCTGCTGATAATGAGACACACCACCAAGGGCAGAGTGCTGTGCTaGAAATTGGCTCACATGACCCTCACTCGCATACTGATTGCCAAA +
Preference number: 6 (lower is better)
Translates to: ILLIMRHTTKGRVLC*KLAHMTLTRILIAK
Trigger: TTTGGCAATCAGTATGCGAGTGAGGGTCATGTGAGCCAATTTCAAGCACAGCACTCTGCCCTTGGTGGTGTGTCTCATTATCAGCAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CAA 90 bp GGACCTCTTAGGAGGTGGATTCTTCGGAAGAGTGGCTGCATAATCTaGGGGATAAAAGGGTCCAAAGAGGTCACCCATGTTACGGTAACT +
Preference number: 6 (lower is better)
Translates to: GPLRRWILRKSGCII*GIKGSKEVTHVTVT
Trigger: AGTTACCGTAACATGGGTGACCTCTTTGGACCCTTTTATCCCCAAGATTATGCAGCCACTCTTCCGAAGAATCCACCTCCTAAGAGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS TCA 72 bp TACCCATGTGTCCCAATGAGTGAGCCCCTGGGTCCCTaGCAATCTGTCTTAGTGGGGATATATCACAGATTA +
Preference number: 6 (lower is better)
Translates to: YPCVPMSEPLGP*QSVLVGIYHRL
Trigger: TAATCTGTGATATATCCCCACTAAGACAGATTGTCAGGGACCCAGGGGCTCACTCATTGGGACACATGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS TCA 72 bp GGAGACATCTTCAATTTTTCTGCAAAGTCATGGTACTaGGAAGAGGACCGACCCCTCATAGTCTCCCGGCTA +
Preference number: 6 (lower is better)
Translates to: GDIFNFSAKSWY*EEDRPLIVSRL
Trigger: TAGCCGGGAGACTATGAGGGGTCGGTCCTCTTCTCAGTACCATGACTTTGCAGAAAAATTGAAGATGTCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS TCA 72 bp GCTTTTGTGCCGAACCTTGACTTTGCTCTGCATTTCTaGGGACCTCTTAGGAGGTGGATTCTTCGGAAGAGT +
Preference number: 6 (lower is better)
Translates to: AFVPNLDFALHF*GPLRRWILRKS
Trigger: ACTCTTCCGAAGAATCCACCTCCTAAGAGGTCCTCAGAAATGCAGAGCAAAGTCAAGGTTCGGCACAAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS GCA 72 bp AAAATTCGGTTTCTGGAACTCATGGGCACATTGCCTTaGCCACACTGGAGATTCTCACCACTCTGCATGAGA +
Preference number: 6 (lower is better)
Translates to: KIRFLELMGTLP*PHWRFSPLCMR
Trigger: TCTCATGCAGAGTGGTGAGAATCTCCAGTGTGGGCAAGGCAATGTGCCCATGAGTTCCAGAAACCGAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS GCA 72 bp ATTCCTGGAGGACCACTGCTTTTGGCTGGAGAAGTCTaGCGAGAAAGATCCCAACAAGACTCTTGTAACTTC +
Preference number: 6 (lower is better)
Translates to: IPGGPLLLAGEV*RERSQQDSCNF
Trigger: GAAGTTACAAGAGTCTTGTTGGGATCTTTCTCGGCAGACTTCTCCAGCCAAAAGCAGTGGTCCTCCAGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CCA 72 bp GCGGAGTGGCTACTCGGGCCATTCCCCTCTCCATTGTaGTTAGAGCTATTATTATCACCATTCTTGTTTCCT +
Preference number: 6 (lower is better)
Translates to: AEWLLGPFPSPL*LELLLSPFLFP
Trigger: AGGAAACAAGAATGGTGATAATAATAGCTCTAACCACAATGGAGAGGGGAATGGCCCGAGTAGCCACTCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CCA 72 bp GAAGGCCCTGGAAGAGGCTTCTCAACATTCGATTCCTaGTTAGTTACACTGACTAGGTCAGATACCACCTCA +
Preference number: 6 (lower is better)
Translates to: EGPGRGFSTFDS*LVTLTRSDTTS
Trigger: TGAGGTGGTATCTGACCTAGTCAGTGTAACTAACCAGGAATCGAATGTTGAGAAGCCTCTTCCAGGGCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CCA 72 bp CTCCTCATGCAGCAAACAATCTGCGTCAATGGCACATaGGTAATGGTATCGGAAGGAGCAGCCTTTGTTGTA +
Preference number: 6 (lower is better)
Translates to: LLMQQTICVNGT*VMVSEGAAFVV
Trigger: TACAACAAAGGCTGCTCCTTCCGATACCATTACCCATGTGCCATTGACGCAGATTGTTTGCTGCATGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CAA 72 bp TACGTACCTACTGGTGGGCCATACATCATTCCGTCTTaGTCATTTTTCAGGGGGCTCCGTACTCTGTCAAGA +
Preference number: 6 (lower is better)
Translates to: YVPTGGPYIIPS*SFFRGLRTLSR
Trigger: TCTTGACAGAGTACGGAGCCCCCTGAAAAATGACAAAGACGGAATGATGTATGGCCCACCAGTAGGTACGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CAA 90 bp TGTTTGGGTGAAATCATGACTGTATCGTTCTCTTTCTCTTCAGCCTaGGGATTTGCCTCAGGGGCCAATATGCCCACTGGAGCTACATTC +
Preference number: 6 (lower is better)
Translates to: CLGEIMTVSFSFSSA*GFASGANMPTGATF
Trigger: GAATGTAGCTCCAGTGGGCATATTGGCCCCTGAGGCAAATCCCAAGGCTGAAGAGAAAGAGAACGATACAGTCATGATTTCACCCAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CAA 90 bp ATTCCATTGGCCCAGAGAATACAACCCTCATGGACCCAAAATTCGTaGCTGTCAAGAGGTAGTTCAGGGATTTGTAACTCCAGCTCAGGC +
Preference number: 6 (lower is better)
Translates to: IPLAQRIQPSWTQNS*LSRGSSGICNSSSG
Trigger: GCCTGAGCTGGAGTTACAAATCCCTGAACTACCTCTTGACAGCAACGAATTTTGGGTCCATGAGGGTTGTATTCTCTGGGCCAATGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CAA 90 bp CTGAGCAGAACTGCTGGCCCAGTCTTTATACTCCTCTTGTTGCTGTaGGTACATCTGTCTCTTATAATGGAGCTGGGAATTCAAACCGGT +
Preference number: 6 (lower is better)
Translates to: LSRTAGPVFILLLLL*VHLSLIMELGIQTG
Trigger: ACCGGTTTGAATTCCCAGCTCCATTATAAGAGACAGATGTACCAACAGCAACAAGAGGAGTATAAAGACTGGGCCAGCAGTTCTGCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CAA 90 bp CACTCCCTGAGCAGAACTGCTGGCCCAGTCTTTATACTCCTCTTGTaGCTGTTGGTACATCTGTCTCTTATAATGGAGCTGGGAATTCAA +
Preference number: 6 (lower is better)
Translates to: HSLSRTAGPVFILLL*LLVHLSLIMELGIQ
Trigger: TTGAATTCCCAGCTCCATTATAAGAGACAGATGTACCAACAGCAACAAGAGGAGTATAAAGACTGGGCCAGCAGTTCTGCTCAGGGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CAA 90 bp GATCACTCCCTGAGCAGAACTGCTGGCCCAGTCTTTATACTCCTCTaGTTGCTGTTGGTACATCTGTCTCTTATAATGGAGCTGGGAATT +
Preference number: 6 (lower is better)
Translates to: DHSLSRTAGPVFILL*LLLVHLSLIMELGI
Trigger: AATTCCCAGCTCCATTATAAGAGACAGATGTACCAACAGCAACAAGAGGAGTATAAAGACTGGGCCAGCAGTTCTGCTCAGGGAGTGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CAA 90 bp TCCTCCTCCTCCTCAGTGTCAGTTTTAGAACCATTAGAAGCGCTTTaGTGCCGAACCTTGACTTTGCTCTGCATTTCTGAGGACCTCTTA +
Preference number: 6 (lower is better)
Translates to: SSSSSVSVLEPLEAL*CRTLTLLCISEDLL
Trigger: TAAGAGGTCCTCAGAAATGCAGAGCAAAGTCAAGGTTCGGCACAAAAGCGCTTCTAATGGTTCTAAAACTGACACTGAGGAGGAGGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS TCA 72 bp TGCCGAGAAAGATCCCAACAAGACTCTTGTAACTTCTaGGAGCTGTGCTTCAATTCCATGCTTTTGGCAGGC +
Preference number: 6 (lower is better)
Translates to: CRERSQQDSCNF*ELCFNSMLLAG
Trigger: GCCTGCCAAAAGCATGGAATTGAAGCACAGCTCTCAGAAGTTACAAGAGTCTTGTTGGGATCTTTCTCGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CCA 72 bp TTAGGACTGGGCATCATTGATGGAGTTGGACTGAGCTaGGGCATTAGCTGTAAAATTCGGTTTCTGGAACTC +
Preference number: 6 (lower is better)
Translates to: LGLGIIDGVGLS*GISCKIRFLEL
Trigger: GAGTTCCAGAAACCGAATTTTACAGCTAATGCCCCAGCTCAGTCCAACTCCATCAATGATGCCCAGTCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CCA 72 bp ACTTGTCAGGGTAACAGCAGGACAGTTTCTATTGTCTaGGTTTGGAAGGTCCTTGGAGGAATCTCTCTTAGG +
Preference number: 6 (lower is better)
Translates to: TCQGNSRTVSIV*VWKVLGGISLR
Trigger: CCTAAGAGAGATTCCTCCAAGGACCTTCCAAACCCAGACAATAGAAACTGTCCTGCTGTTACCCTGACAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CAA 72 bp AGATCCAGCATTCACACTGTAACTGCCATCATAGCTTaGTCCAGACTGACTGAAACGCTGTGGAGAAGGGAA +
Preference number: 6 (lower is better)
Translates to: RSSIHTVTAIIA*SRLTETLWRRE
Trigger: TTCCCTTCTCCACAGCGTTTCAGTCAGTCTGGACAAAGCTATGATGGCAGTTACAGTGTGAATGCTGGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CAA 72 bp ACTGCGGAGTGGCTACTCGGGCCATTCCCCTCTCCATaGTGGTTAGAGCTATTATTATCACCATTCTTGTTT +
Preference number: 6 (lower is better)
Translates to: TAEWLLGPFPSP*WLELLLSPFLF
Trigger: AAACAAGAATGGTGATAATAATAGCTCTAACCACAATGGAGAGGGGAATGGCCCGAGTAGCCACTCCGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CAA 72 bp GCCCAGAGAATACAACCCTCATGGACCCAAAATTCGTaGCTGTCAAGAGGTAGTTCAGGGATTTGTAACTCC +
Preference number: 6 (lower is better)
Translates to: AQRIQPSWTQNS*LSRGSSGICNS
Trigger: GGAGTTACAAATCCCTGAACTACCTCTTGACAGCAACGAATTTTGGGTCCATGAGGGTTGTATTCTCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CAA 90 bp GAGAAAGATGGCTGTAGGAATTGTATGCTTTATCGGCACCTTCTTTaGATGGGTGGAGGAGGCGCCCTTTATCATCAGCGTTACTGTTTT +
Preference number: 6 (lower is better)
Translates to: EKDGCRNCMLYRHLL*MGGGGALYHQRYCF
Trigger: AAAACAGTAACGCTGATGATAAAGGGCGCCTCCTCCACCCATCAAAAGAAGGTGCCGATAAAGCATACAATTCCTACAGCCATCTTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CAA 90 bp TTGGTCTTAGCAGGACTTGTCAGGGTAACAGCAGGACAGTTTCTATaGTCTGGGTTTGGAAGGTCCTTGGAGGAATCTCTCTTAGGAATA +
Preference number: 6 (lower is better)
Translates to: LVLAGLVRVTAGQFL*SGFGRSLEESLLGI
Trigger: TATTCCTAAGAGAGATTCCTCCAAGGACCTTCCAAACCCAGACAATAGAAACTGTCCTGCTGTTACCCTGACAAGTCCTGCTAAGACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CAA 90 bp TCAGTTTTAGAACCATTAGAAGCGCTTTTGTGCCGAACCTTGACTTaGCTCTGCATTTCTGAGGACCTCTTAGGAGGTGGATTCTTCGGA +
Preference number: 6 (lower is better)
Translates to: SVLEPLEALLCRTLT*LCISEDLLGGGFFG
Trigger: TCCGAAGAATCCACCTCCTAAGAGGTCCTCAGAAATGCAGAGCAAAGTCAAGGTTCGGCACAAAAGCGCTTCTAATGGTTCTAAAACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CAA 90 bp TCAGTGTCAGTTTTAGAACCATTAGAAGCGCTTTTGTGCCGAACCTaGACTTTGCTCTGCATTTCTGAGGACCTCTTAGGAGGTGGATTC +
Preference number: 6 (lower is better)
Translates to: SVSVLEPLEALLCRT*TLLCISEDLLGGGF
Trigger: GAATCCACCTCCTAAGAGGTCCTCAGAAATGCAGAGCAAAGTCAAGGTTCGGCACAAAAGCGCTTCTAATGGTTCTAAAACTGACACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS TCA 72 bp TTGTTCAGAAGGCCCCTGCTAGCTAATTCATTGGTTTaGCTGACTAAGATGTTAGGCCTTGCAGTTCCTTCC +
Preference number: 6 (lower is better)
Translates to: LFRRPLLANSLV*LTKMLGLAVPS
Trigger: GGAAGGAACTGCAAGGCCTAACATCTTAGTCAGTCAAACCAATGAATTAGCTAGCAGGGGCCTTCTGAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS GCA 72 bp CCCAGAGAATACAACCCTCATGGACCCAAAATTCGTTaGTGTCAAGAGGTAGTTCAGGGATTTGTAACTCCA +
Preference number: 6 (lower is better)
Translates to: PREYNPHGPKIR*CQEVVQGFVTP
Trigger: TGGAGTTACAAATCCCTGAACTACCTCTTGACAGCAACGAATTTTGGGTCCATGAGGGTTGTATTCTCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CCA 72 bp TTCCTGAGTGCTTGGGTCATGATACGTACCTACTGGTaGGCCATACATCATTCCGTCTTTGTCATTTTTCAG +
Preference number: 6 (lower is better)
Translates to: FLSAWVMIRTYW*AIHHSVFVIFQ
Trigger: CTGAAAAATGACAAAGACGGAATGATGTATGGCCCACCAGTAGGTACGTATCATGACCCAAGCACTCAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CCA 72 bp AGCTTCCTGAGTGCTTGGGTCATGATACGTACCTACTaGTGGGCCATACATCATTCCGTCTTTGTCATTTTT +
Preference number: 6 (lower is better)
Translates to: SFLSAWVMIRTY*WAIHHSVFVIF
Trigger: AAAAATGACAAAGACGGAATGATGTATGGCCCACCAGTAGGTACGTATCATGACCCAAGCACTCAGGAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CCA 72 bp GAATTGTATGCTTTATCGGCACCTTCTTTTGATGGGTaGAGGAGGCGCCCTTTATCATCAGCGTTACTGTTT +
Preference number: 6 (lower is better)
Translates to: ELYALSAPSFDG*RRRPLSSALLF
Trigger: AAACAGTAACGCTGATGATAAAGGGCGCCTCCTCCACCCATCAAAAGAAGGTGCCGATAAAGCATACAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CCA 72 bp CAGGGTAACAGCAGGACAGTTTCTATTGTCTGGGTTTaGAAGGTCCTTGGAGGAATCTCTCTTAGGAATAGA +
Preference number: 6 (lower is better)
Translates to: QGNSRTVSIVWV*KVLGGISLRNR
Trigger: TCTATTCCTAAGAGAGATTCCTCCAAGGACCTTCCAAACCCAGACAATAGAAACTGTCCTGCTGTTACCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CAA 72 bp AGCAGAACTGCTGGCCCAGTCTTTATACTCCTCTTGTaGCTGTTGGTACATCTGTCTCTTATAATGGAGCTG +
Preference number: 6 (lower is better)
Translates to: SRTAGPVFILLL*LLVHLSLIMEL
Trigger: CAGCTCCATTATAAGAGACAGATGTACCAACAGCAACAAGAGGAGTATAAAGACTGGGCCAGCAGTTCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CAA 72 bp CTGAGCAGAACTGCTGGCCCAGTCTTTATACTCCTCTaGTTGCTGTTGGTACATCTGTCTCTTATAATGGAG +
Preference number: 6 (lower is better)
Translates to: LSRTAGPVFILL*LLLVHLSLIME
Trigger: CTCCATTATAAGAGACAGATGTACCAACAGCAACAAGAGGAGTATAAAGACTGGGCCAGCAGTTCTGCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS TCA 72 bp TTAGATGATGATGAGGGCCTCTTAGACGTCTTCTTCTaGGGTGTCAAAGCATCAGAAAGTAACATGTGCTGG +
Preference number: 6 (lower is better)
Translates to: LDDDEGLLDVFF*GVKASESNMCW
Trigger: CCAGCACATGTTACTTTCTGATGCTTTGACACCTCAGAAGAAGACGTCTAAGAGGCCCTCATCATCATCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS GCA 72 bp TCAGTGTCAGTTTTAGAACCATTAGAAGCGCTTTTGTaGCGAACCTTGACTTTGCTCTGCATTTCTGAGGAC +
Preference number: 6 (lower is better)
Translates to: SVSVLEPLEALL*RTLTLLCISED
Trigger: GTCCTCAGAAATGCAGAGCAAAGTCAAGGTTCGGCACAAAAGCGCTTCTAATGGTTCTAAAACTGACACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CAA 72 bp GAGTTGGGAGAAAAAGGAGCATGTAAAGAACTCCTATaGGCCCTCTCTGAAAAGGTCATATGTGGGTTCATG +
Preference number: 6 (lower is better)
Translates to: ELGEKGACKELL*ALSEKVICGFM
Trigger: CATGAACCCACATATGACCTTTTCAGAGAGGGCCAATAGGAGTTCTTTACATGCTCCTTTTTCTCCCAACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CAA 72 bp GCAGGACAGTTTCTATTGTCTGGGTTTGGAAGGTCCTaGGAGGAATCTCTCTTAGGAATAGACTTGATATCC +
Preference number: 6 (lower is better)
Translates to: AGQFLLSGFGRS*EESLLGIDLIS
Trigger: GGATATCAAGTCTATTCCTAAGAGAGATTCCTCCAAGGACCTTCCAAACCCAGACAATAGAAACTGTCCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CAA 72 bp TCCTCAGTGTCAGTTTTAGAACCATTAGAAGCGCTTTaGTGCCGAACCTTGACTTTGCTCTGCATTTCTGAG +
Preference number: 6 (lower is better)
Translates to: SSVSVLEPLEAL*CRTLTLLCISE
Trigger: CTCAGAAATGCAGAGCAAAGTCAAGGTTCGGCACAAAAGCGCTTCTAATGGTTCTAAAACTGACACTGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CAA 90 bp CCCTTCCGGCTCCTCACCAATTTGGTCTGTTCTTCTTCTTCAGCATaGATGATTGTACAAACAGCTCCAAGTTCACACTTATTTACTACA +
Preference number: 6 (lower is better)
Translates to: PFRLLTNLVCSSSSA*MIVQTAPSSHLFTT
Trigger: TGTAGTAAATAAGTGTGAACTTGGAGCTGTTTGTACAATCATCAATGCTGAAGAAGAAGAACAGACCAAATTGGTGAGGAGCCGGAAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS TCA 72 bp ATACTGAGGATAACCACTGACATTTCGTGGTACAGCTaGCCCAAAACTCTCTTTGTAACTATAGCGCAAACT +
Preference number: 6 (lower is better)
Translates to: ILRITTDISWYS*PKTLFVTIAQT
Trigger: AGTTTGCGCTATAGTTACAAAGAGAGTTTTGGGTCAGCTGTACCACGAAATGTCAGTGGTTATCCTCAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS TCA 72 bp GATGCACTCCTCCTAATATTTGGAGATGTGATCTTCTaGACTATAGCTTCCAATTTTAATCCCCGTCCCTTC +
Preference number: 6 (lower is better)
Translates to: DALLLIFGDVIF*TIASNFNPRPF
Trigger: GAAGGGACGGGGATTAAAATTGGAAGCTATAGTTCAGAAGATCACATCTCCAAATATTAGGAGGAGTGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CAA 90 bp GCAGTGGTCTCCAGATTTCTTGTTGAAACTAGCTTGAGATTTGGATaGTTCAAAGTCTTCCTCTTTTATCTGTCCACTCTGGGATTTCAA +
Preference number: 6 (lower is better)
Translates to: AVVSRFLVETSLRFG*FKVFLFYLSTLGFQ
Trigger: TTGAAATCCCAGAGTGGACAGATAAAAGAGGAAGACTTTGAACAATCCAAATCTCAAGCTAGTTTCAACAAGAAATCTGGAGACCACTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CCA 72 bp CTCAGCACTGTTTGCAGATGCACTCCTCCTAATATTTaGAGATGTGATCTTCTGAACTATAGCTTCCAATTT +
Preference number: 6 (lower is better)
Translates to: LSTVCRCTPPNI*RCDLLNYSFQF
Trigger: AAATTGGAAGCTATAGTTCAGAAGATCACATCTCCAAATATTAGGAGGAGTGCATCTGCAAACAGTGCTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS CAA 72 bp TCCAGATTTCTTGTTGAAACTAGCTTGAGATTTGGATaGTTCAAAGTCTTCCTCTTTTATCTGTCCACTCTG +
Preference number: 6 (lower is better)
Translates to: SRFLVETSLRFG*FKVFLFYLSTL
Trigger: CAGAGTGGACAGATAAAAGAGGAAGACTTTGAACAATCCAAATCTCAAGCTAGTTTCAACAAGAAATCTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10
CDS TCA 72 bp AAAATTTTTCATAGACTGAGGTTGATAGCTATAATTTaGTTGTGTTCCATAAGCCTGTGCATTAGAACCCAC +
Preference number: 6 (lower is better)
Translates to: KIFHRLRLIAII*LCSISLCIRTH
Trigger: GTGGGTTCTAATGCACAGGCTTATGGAACACAATCAAATTATAGCTATCAACCTCAGTCTATGAAAAATTTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000048966.7
ENSMUST00000109510.10