Pregenerated sensors for TCF15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068079Ensembl transcript IDs: ENSMUST00000089112.6
Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTTGTCCCTGGCCAGCTAGGCCTGGATGGCTAGATGGGTCCTTGTaGCTCTCCAGGGTGAGCCCTGTGCCCAGGCCATTGTCCTCCGGT | + |
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Preference number: 1 (lower is better) Translates to: PCPWPARPGWLDGSL*LSRVSPVPRPLSSG Trigger: ACCGGAGGACAATGGCCTGGGCACAGGGCTCACCCTGGAGAGCCACAAGGACCCATCTAGCCATCCAGGCCTAGCTGGCCAGGGACAAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089112.6 |
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| 3UTR CCA 90 bp | GGTTTTCTAAAATTTCTGCCTTGTCCCTGGCCAGCTAGGCCTGGATaGCTAGATGGGTCCTTGTGGCTCTCCAGGGTGAGCCCTGTGCCC | + |
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Preference number: 1 (lower is better) Translates to: GFLKFLPCPWPARPG*LDGSLWLSRVSPVP Trigger: GGGCACAGGGCTCACCCTGGAGAGCCACAAGGACCCATCTAGCCATCCAGGCCTAGCTGGCCAGGGACAAGGCAGAAATTTTAGAAAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089112.6 |
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| 3UTR CCA 90 bp | AGTGGTTTGGGCTTCTGGAATCTTCTCCTCTGTCCAGCTAGGGGCTaGCTCATGGCCTCTTTCTCTGGAGTCCTTCTTGGAGAAAACCAG | + |
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Preference number: 1 (lower is better) Translates to: SGLGFWNLLLCPARG*LMASFSGVLLGENQ Trigger: CTGGTTTTCTCCAAGAAGGACTCCAGAGAAAGAGGCCATGAGCCAGCCCCTAGCTGGACAGAGGAGAAGATTCCAGAAGCCCAAACCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089112.6 |
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| 3UTR CAA 90 bp | CTGCCTTGTCCCTGGCCAGCTAGGCCTGGATGGCTAGATGGGTCCTaGTGGCTCTCCAGGGTGAGCCCTGTGCCCAGGCCATTGTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: LPCPWPARPGWLDGS*WLSRVSPVPRPLSS Trigger: GGAGGACAATGGCCTGGGCACAGGGCTCACCCTGGAGAGCCACAAGGACCCATCTAGCCATCCAGGCCTAGCTGGCCAGGGACAAGGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089112.6 |
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| 3UTR-3UTR CCA 90 bp | CAGGGTGAGCCCTGTGCCCAGGCCATTGTCCTCCGGTCCTTACACAACGCAGGACTCTGGAGTCCTTCTTaGAGAAAACCAGGGATCCAG | + |
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Preference number: 2 (lower is better) Translates to: QGEPCAQAIVLRSLHNAGLWSPS*RKPGIQ Trigger: CTGGATCCCTGGTTTTCTCCAAGAAGGACTCCAGAG...TCCTGCGTTGTGTAAGGACCGGAGGACAATGGCCTGGGCACAGGGCTCACCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089112.6 |
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| 3UTR-3UTR CCA 90 bp | AGGCCATTGTCCTCCGGTCCTTACACAACGCAGGAGTGGTTTGGGCTTCTGGAACTAGGGGCTGGCTCATaGCCTCTTTCTCTGGAGTCC | + |
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Preference number: 2 (lower is better) Translates to: RPLSSGPYTTQEWFGLLELGAGS*PLSLES Trigger: GGACTCCAGAGAAAGAGGCCATGAGCCAGCCCCTAG...TTCCAGAAGCCCAAACCACTCCTGCGTTGTGTAAGGACCGGAGGACAATGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089112.6 |
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| 3UTR-3UTR CCA 90 bp | CACACAGACACACAGACACACACACACACTTTCAAAAATAGTCTTTGGTTTTCTAACGCAGGAGTGGTTTaGGCTTCTGGAATCTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: HTDTQTHTHTFKNSLWFSNAGVV*ASGIFS Trigger: GGAGAAGATTCCAGAAGCCCAAACCACTCCTGCGTT...AGAAAACCAAAGACTATTTTTGAAAGTGTGTGTGTGTGTCTGTGTGTCTGTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089112.6 |
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| 3UTR-3UTR CCA 90 bp | CACACAGACACACAGACACACACACACACTTTCAAAAATAGTCTTTGGTTTTCTCATGGCCTCTTTCTCTaGAGTCCTTCTTGGAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: HTDTQTHTHTFKNSLWFSHGLFL*SPSWRK Trigger: TTTTCTCCAAGAAGGACTCCAGAGAAAGAGGCCATG...AGAAAACCAAAGACTATTTTTGAAAGTGTGTGTGTGTGTCTGTGTGTCTGTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089112.6 |
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| 3UTR CCA 72 bp | TGGCCAGCTAGGCCTGGATGGCTAGATGGGTCCTTGTaGCTCTCCAGGGTGAGCCCTGTGCCCAGGCCATTG | + |
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Preference number: 3 (lower is better) Translates to: WPARPGWLDGSL*LSRVSPVPRPL Trigger: CAATGGCCTGGGCACAGGGCTCACCCTGGAGAGCCACAAGGACCCATCTAGCCATCCAGGCCTAGCTGGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089112.6 |
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| 3UTR CCA 72 bp | GGCTTCTGGAATCTTCTCCTCTGTCCAGCTAGGGGCTaGCTCATGGCCTCTTTCTCTGGAGTCCTTCTTGGA | + |
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Preference number: 3 (lower is better) Translates to: GFWNLLLCPARG*LMASFSGVLLG Trigger: TCCAAGAAGGACTCCAGAGAAAGAGGCCATGAGCCAGCCCCTAGCTGGACAGAGGAGAAGATTCCAGAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089112.6 |
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| 3UTR CCA 72 bp | AGGCCATTGTCCTCCGGTCCTTACACAACGCAGGAGTaGTTTGGGCTTCTGGAATCTTCTCCTCTGTCCAGC | + |
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Preference number: 3 (lower is better) Translates to: RPLSSGPYTTQE*FGLLESSPLSS Trigger: GCTGGACAGAGGAGAAGATTCCAGAAGCCCAAACCACTCCTGCGTTGTGTAAGGACCGGAGGACAATGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089112.6 |
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| 3UTR CCA 72 bp | GGAATCTTCTCCTCTGTCCAGCTAGGGGCTGGCTCATaGCCTCTTTCTCTGGAGTCCTTCTTGGAGAAAACC | + |
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Preference number: 3 (lower is better) Translates to: GIFSSVQLGAGS*PLSLESFLEKT Trigger: GGTTTTCTCCAAGAAGGACTCCAGAGAAAGAGGCCATGAGCCAGCCCCTAGCTGGACAGAGGAGAAGATTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089112.6 |
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| 3UTR CCA 72 bp | ATTGTCCTCCGGTCCTTACACAACGCAGGAGTGGTTTaGGCTTCTGGAATCTTCTCCTCTGTCCAGCTAGGG | + |
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Preference number: 3 (lower is better) Translates to: IVLRSLHNAGVV*ASGIFSSVQLG Trigger: CCCTAGCTGGACAGAGGAGAAGATTCCAGAAGCCCAAACCACTCCTGCGTTGTGTAAGGACCGGAGGACAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089112.6 |
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| CDS-3UTR GCA 90 bp | CAGGGTGAGCCCTGTGCCCAGGCCATTGTCCTCCGGTCCTTACACAACGCAGGATTGGCCGCCTGTCGCTaGCGCACCACCACCACGGGG | + |
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Preference number: 4 (lower is better) Translates to: QGEPCAQAIVLRSLHNAGLAACR*RTTTTG Trigger: CCCCGTGGTGGTGGTGCGGCAGCGACAGGCGGCCAA...TCCTGCGTTGTGTAAGGACCGGAGGACAATGGCCTGGGCACAGGGCTCACCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089112.6 |
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| CDS-3UTR GCA 90 bp | GCCCTGTGCCCAGGCCATTGTCCTCCGGTCCTTACACAACGCAGGAGTGGTTTGGCGCGGAAACACGGCTaGCCGTCGTCGGCCGCGTCG | + |
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Preference number: 4 (lower is better) Translates to: ALCPGHCPPVLTQRRSGLARKHG*PSSAAS Trigger: CGACGCGGCCGACGACGGGCAGCCGTGTTTCCGCGC...CAAACCACTCCTGCGTTGTGTAAGGACCGGAGGACAATGGCCTGGGCACAGGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089112.6 |
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| CDS-3UTR GCA 90 bp | GGAGTGGTTTGGGCTTCTGGAATCTTCTCCTCTGTCCAGCTAGGGGCTGGCTCATCCGGGTACAGCACGTaGGCGCCGACCGGGCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: GVVWASGIFSSVQLGAGSSGYST*APTGRS Trigger: GCTGCGCCCGGTCGGCGCGCACGTGCTGTACCCGGA...TGAGCCAGCCCCTAGCTGGACAGAGGAGAAGATTCCAGAAGCCCAAACCACTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089112.6 |
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| CDS-3UTR GCA 90 bp | CAGGGTGAGCCCTGTGCCCAGGCCATTGTCCTCCGGTCCTTACACAACGCAGGAACGCGTCGCTCTCGCTaGGGTTCTCCTCGTCCTCGC | + |
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Preference number: 4 (lower is better) Translates to: QGEPCAQAIVLRSLHNAGTRRSR*GSPRPR Trigger: GCGAGGACGAGGAGAACCGCAGCGAGAGCGACGCGT...TCCTGCGTTGTGTAAGGACCGGAGGACAATGGCCTGGGCACAGGGCTCACCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089112.6 |
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| CDS-3UTR GCA 90 bp | CTCCAGGGTGAGCCCTGTGCCCAGGCCATTGTCCTCCGGTCCTTACACAACGCATCACTTTCAAGCAGCTaGCCCCCAGGTCACGACGGC | + |
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Preference number: 4 (lower is better) Translates to: LQGEPCAQAIVLRSLHNASLSSS*PPGHDG Trigger: GCCGTCGTGACCTGGGGGGCAGCTGCTTGAAAGTGA...TGCGTTGTGTAAGGACCGGAGGACAATGGCCTGGGCACAGGGCTCACCCTGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089112.6 |
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| CDS-3UTR CCA 90 bp | ACACAACGCAGGAGTGGTTTGGGCTTCTGGAATCTTCTCCTCTGTCCAGCTAGGCTCGCTCGCGCGCGTTaGCCGCCTGTCGCTGCCGCA | + |
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Preference number: 4 (lower is better) Translates to: TQRRSGLGFWNLLLCPARLARAR*PPVAAA Trigger: TGCGGCAGCGACAGGCGGCCAACGCGCGCGAGCGAG...CCTAGCTGGACAGAGGAGAAGATTCCAGAAGCCCAAACCACTCCTGCGTTGTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089112.6 |
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| 3UTR CAA 72 bp | TTGTGGCTCTCCAGGGTGAGCCCTGTGCCCAGGCCATaGTCCTCCGGTCCTTACACAACGCAGGAGTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: LWLSRVSPVPRP*SSGPYTTQEWF Trigger: AAACCACTCCTGCGTTGTGTAAGGACCGGAGGACAATGGCCTGGGCACAGGGCTCACCCTGGAGAGCCACAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089112.6 |
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| CDS-3UTR CCA 90 bp | TTTGCTCACATACTACATTCACACAGACACACAGACACACACACACACTTTCAACAGCAGCCGAACGACTaGTCCGACGCGTCGCTCTCG | + |
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Preference number: 4 (lower is better) Translates to: FAHILHSHRHTDTHTHFQQQPND*SDASLS Trigger: CGAGAGCGACGCGTCGGACCAGTCGTTCGGCTGCTG...TTGAAAGTGTGTGTGTGTGTCTGTGTGTCTGTGTGAATGTAGTATGTGAGCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089112.6 |
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| CDS GCA 90 bp | GCCCTTCGCAGCAGCCGAACGACTGGTCCGACGCGTCGCTCTCGCTaGGGTTCTCCTCGTCCTCGCTCAGCAGCCTCACGTCCGGGTACA | + |
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Preference number: 5 (lower is better) Translates to: ALRSSRTTGPTRRSR*GSPRPRSAASRPGT Trigger: TGTACCCGGACGTGAGGCTGCTGAGCGAGGACGAGGAGAACCGCAGCGAGAGCGACGCGTCGGACCAGTCGTTCGGCTGCTGCGAAGGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089112.6 |
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| CDS-3UTR CAA 90 bp | GCCCTGTGCCCAGGCCATTGTCCTCCGGTCCTTACACAACGCAGGAGTGGTTTGTCTCGCTCGCGCGCGTaGGCCGCCTGTCGCTGCCGC | + |
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Preference number: 5 (lower is better) Translates to: ALCPGHCPPVLTQRRSGLSRSRA*AACRCR Trigger: GCGGCAGCGACAGGCGGCCAACGCGCGCGAGCGAGA...CAAACCACTCCTGCGTTGTGTAAGGACCGGAGGACAATGGCCTGGGCACAGGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089112.6 |
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| CDS GCA 72 bp | GCGCTCTTGCCACCGCCCGCCGCGCGGAAACACGGCTaGCCGTCGTCGGCCGCGTCGCCCAGCAGCAGCACG | + |
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Preference number: 6 (lower is better) Translates to: ALLPPPAARKHG*PSSAASPSSST Trigger: CGTGCTGCTGCTGGGCGACGCGGCCGACGACGGGCAGCCGTGTTTCCGCGCGGCGGGCGGTGGCAAGAGCGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089112.6 |
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| CDS CCA 72 bp | CGTGCCGCCTCCAGCCCTTCGCAGCAGCCGAACGACTaGTCCGACGCGTCGCTCTCGCTGCGGTTCTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: RAASSPSQQPND*SDASLSLRFSS Trigger: CGAGGAGAACCGCAGCGAGAGCGACGCGTCGGACCAGTCGTTCGGCTGCTGCGAAGGGCTGGAGGCGGCACG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089112.6 |
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| CDS GCA 72 bp | AGCAGCCGAACGACTGGTCCGACGCGTCGCTCTCGCTaGGGTTCTCCTCGTCCTCGCTCAGCAGCCTCACGT | + |
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Preference number: 6 (lower is better) Translates to: SSRTTGPTRRSR*GSPRPRSAASR Trigger: ACGTGAGGCTGCTGAGCGAGGACGAGGAGAACCGCAGCGAGAGCGACGCGTCGGACCAGTCGTTCGGCTGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089112.6 |
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