RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TCF12 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000032228

Ensembl transcript IDs: ENSMUST00000034755.13, ENSMUST00000183404.8, ENSMUST00000183492.8, ENSMUST00000183594.2, ENSMUST00000183647.8, ENSMUST00000183918.8, ENSMUST00000183992.8, ENSMUST00000184029.2, ENSMUST00000184107.8, ENSMUST00000184378.8, ENSMUST00000184416.8, ENSMUST00000184448.8, ENSMUST00000184523.8, ENSMUST00000184783.8, ENSMUST00000184867.8, ENSMUST00000185117.8

Found 549 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAGTGGAGAGATGAGACAGTCTCTGATTGTGCAGAAGCGACACACTaGTTACAGCAGAGTGATATGCTGCAAACACCTCACGGCCGACGG +
Preference number: 1 (lower is better)
Translates to: EWRDETVSDCAEATH*LQQSDMLQTPHGRR
Trigger: CCGTCGGCCGTGAGGTGTTTGCAGCATATCACTCTGCTGTAATCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCATCTCTCCACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR CCA 90 bp GACATGTGGGATGTGGAGGTCCCCAGAATTCCACCAAAACCAGGCTaGCTCATCCCATTCGATGAACTCCAAAGGTCAGAAGAACTGTGG +
Preference number: 1 (lower is better)
Translates to: DMWDVEVPRIPPKPG*LIPFDELQRSEELW
Trigger: CCACAGTTCTTCTGACCTTTGGAGTTCATCGAATGGGATGAGCCAGCCTGGTTTTGGTGGAATTCTGGGGACCTCCACATCCCACATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000183647.8
ENSMUST00000184378.8
ENSMUST00000184416.8
ENSMUST00000184867.8
3UTR CCA 90 bp AGGCGGCAACATATGGTGAGCTGCTGGTACTACCACGGTGGAAGCTaGACATTGGCGGAAGACTTGTGTTTATGTCTGTTGGTGACACTG +
Preference number: 1 (lower is better)
Translates to: RRQHMVSCWYYHGGS*TLAEDLCLCLLVTL
Trigger: CAGTGTCACCAACAGACATAAACACAAGTCTTCCGCCAATGTCCAGCTTCCACCGTGGTAGTACCAGCAGCTCACCATATGTTGCCGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183647.8
ENSMUST00000184378.8
ENSMUST00000184416.8
ENSMUST00000184867.8
3UTR TCA 90 bp GGATTAGAGACAGAGGGTGCCTTAATGCATAATGCTAAGACAGACTaGCAGGTACAGCTCGGTGCTAATCTGGCTCTTCTTGGGGTGGGG +
Preference number: 1 (lower is better)
Translates to: GLETEGALMHNAKTD*QVQLGANLALLGVG
Trigger: CCCCACCCCAAGAAGAGCCAGATTAGCACCGAGCTGTACCTGTCAGTCTGTCTTAGCATTATGCATTAAGGCACCCTCTGTCTCTAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR GCA 90 bp ACACTGAGTGTGGAGGATAACTCAAGCGGTCATGTGAATGAAGGCTaGCATAACTACTGGACTGAGACATGTGGGATGTGGAGGTCCCCA +
Preference number: 1 (lower is better)
Translates to: TLSVEDNSSGHVNEG*HNYWTETCGMWRSP
Trigger: TGGGGACCTCCACATCCCACATGTCTCAGTCCAGTAGTTATGGCAGCCTTCATTCACATGACCGCTTGAGTTATCCTCCACACTCAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000183647.8
ENSMUST00000184378.8
ENSMUST00000184416.8
ENSMUST00000184867.8
3UTR CCA 90 bp GTATGTGAGGCGGCAACATATGGTGAGCTGCTGGTACTACCACGGTaGAAGCTGGACATTGGCGGAAGACTTGTGTTTATGTCTGTTGGT +
Preference number: 1 (lower is better)
Translates to: VCEAATYGELLVLPR*KLDIGGRLVFMSVG
Trigger: ACCAACAGACATAAACACAAGTCTTCCGCCAATGTCCAGCTTCCACCGTGGTAGTACCAGCAGCTCACCATATGTTGCCGCCTCACATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183647.8
ENSMUST00000184378.8
ENSMUST00000184416.8
ENSMUST00000184867.8
3UTR TCA 90 bp GGTCCCCAGAATTCCACCAAAACCAGGCTGGCTCATCCCATTCGATaGACTCCAAAGGTCAGAAGAACTGTGGGTCCCATCTTGCATAAA +
Preference number: 1 (lower is better)
Translates to: GPQNSTKTRLAHPIR*TPKVRRTVGPILHK
Trigger: TTTATGCAAGATGGGACCCACAGTTCTTCTGACCTTTGGAGTTCATCGAATGGGATGAGCCAGCCTGGTTTTGGTGGAATTCTGGGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000183647.8
ENSMUST00000184378.8
ENSMUST00000184416.8
ENSMUST00000184867.8
3UTR CCA 90 bp GAGGATAACTCAAGCGGTCATGTGAATGAAGGCTGCCATAACTACTaGACTGAGACATGTGGGATGTGGAGGTCCCCAGAATTCCACCAA +
Preference number: 1 (lower is better)
Translates to: EDNSSGHVNEGCHNY*TETCGMWRSPEFHQ
Trigger: TTGGTGGAATTCTGGGGACCTCCACATCCCACATGTCTCAGTCCAGTAGTTATGGCAGCCTTCATTCACATGACCGCTTGAGTTATCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000183647.8
ENSMUST00000184378.8
ENSMUST00000184416.8
ENSMUST00000184867.8
3UTR TCA 90 bp CTAGGCTATGGTCACAGATGGTGTCTGCTTATCACTTCAAGGACATaGACAAAGCATACAGGACTGCAAGGAGGGTTCTGGACTGTGACC +
Preference number: 1 (lower is better)
Translates to: LGYGHRWCLLITSRT*TKHTGLQGGFWTVT
Trigger: GGTCACAGTCCAGAACCCTCCTTGCAGTCCTGTATGCTTTGTTCATGTCCTTGAAGTGATAAGCAGACACCATCTGTGACCATAGCCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR TCA 90 bp CCTCGTGCAAAGGAGCTCCAGGTGGTTCCTATCTCAGGCTACCCATaGAGCCCTCACAGTAGTCAATGCATACATGTTTGTATACATGCA +
Preference number: 1 (lower is better)
Translates to: PRAKELQVVPISGYP*SPHSSQCIHVCIHA
Trigger: TGCATGTATACAAACATGTATGCATTGACTACTGTGAGGGCTTCATGGGTAGCCTGAGATAGGAACCACCTGGAGCTCCTTTGCACGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183404.8
3UTR TCA 90 bp TTCAGTTCTGTGTTTGAGGCAGCAACAGTACTAGACAGGACCGAATaGTTGCCATTGAGACTGACTGAATCTTCCCGATGTGTTCCGACC +
Preference number: 1 (lower is better)
Translates to: FSSVFEAATVLDRTE*LPLRLTESSRCVPT
Trigger: GGTCGGAACACATCGGGAAGATTCAGTCAGTCTCAATGGCAATCATTCGGTCCTGTCTAGTACTGTTGCTGCCTCAAACACAGAACTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184867.8
3UTR CCA 90 bp GATCTAGGGCTACAGAATCATGGAGCGGTCTTCTTCTCGAACTTGTaGCAGAGAATGAGTAGTATGGTGTTCCAGGCTTTCCTGAAGAAG +
Preference number: 1 (lower is better)
Translates to: DLGLQNHGAVFFSNL*QRMSSMVFQAFLKK
Trigger: CTTCTTCAGGAAAGCCTGGAACACCATACTACTCATTCTCTGCCACAAGTTCGAGAAGAAGACCGCTCCATGATTCTGTAGCCCTAGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183594.2
ENSMUST00000183647.8
ENSMUST00000184107.8
ENSMUST00000184416.8
3UTR CCA 90 bp GGTCCCATCTTGCATAAAGAAAGTGCTAGCGAACATACTGGTTGGTaGCTTGGGAGATGGGTAACTAGGAGATTCACGGTTGAAATCGTC +
Preference number: 1 (lower is better)
Translates to: GPILHKESASEHTGW*LGRWVTRRFTVEIV
Trigger: GACGATTTCAACCGTGAATCTCCTAGTTACCCATCTCCCAAGCCACCAACCAGTATGTTCGCTAGCACTTTCTTTATGCAAGATGGGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183647.8
ENSMUST00000184107.8
ENSMUST00000184378.8
ENSMUST00000184416.8
3UTR CCA 90 bp ATTGATGCATTATGGGATGGTCCCAGCAAACTGTGTATGTCACTGTaGCTAGTAGGCAGACTGGTAGAAGGTCCAACTGCATGGTTTCGT +
Preference number: 1 (lower is better)
Translates to: IDALWDGPSKLCMSL*LVGRLVEGPTAWFR
Trigger: ACGAAACCATGCAGTTGGACCTTCTACCAGTCTGCCTACTAGCCACAGTGACATACACAGTTTGCTGGGACCATCCCATAATGCATCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184867.8
3UTR TCA 90 bp AATCGAATTTCAAAATCCATCAAAAGATGTGATTTGTCAAGATCCTaGGAGGACTCAGCCTCCTCGTGCAAAGGAGCTCCAGGTGGTTCC +
Preference number: 1 (lower is better)
Translates to: NRISKSIKRCDLSRS*EDSASSCKGAPGGS
Trigger: GGAACCACCTGGAGCTCCTTTGCACGAGGAGGCTGAGTCCTCTCAGGATCTTGACAAATCACATCTTTTGATGGATTTTGAAATTCGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183404.8
3UTR CCA 90 bp TTGGTACTGCTTGTTCTGCCCCTAGATGAGACCTTGATGTCTTTCTaGGAGGACTCATCATCTGATTTCATGTCATCTGATGAAGGAGGT +
Preference number: 1 (lower is better)
Translates to: LVLLVLPLDETLMSF*EDSSSDFMSSDEGG
Trigger: ACCTCCTTCATCAGATGACATGAAATCAGATGATGAGTCCTCCCAGAAAGACATCAAGGTCTCATCTAGGGGCAGAACAAGCAGTACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184867.8
3UTR TCA 90 bp GGTTGCCACTGCTCTGTGAACAGCTTTAACAATGCTGGCATCAGCTaGGTGTACATCAGCTTCCCACATGAACTTTTCCCTTTATATGTA +
Preference number: 1 (lower is better)
Translates to: GCHCSVNSFNNAGIS*VYISFPHELFPLYV
Trigger: TACATATAAAGGGAAAAGTTCATGTGGGAAGCTGATGTACACTCAGCTGATGCCAGCATTGTTAAAGCTGTTCACAGAGCAGTGGCAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR TCA 90 bp ACCACCTCTGAAATTTTCTGGTGTTTTATGGTTCAGTTCTGTGTTTaGGGCAGCAACAGTACTAGACAGGACCGAATGATTGCCATTGAG +
Preference number: 1 (lower is better)
Translates to: TTSEIFWCFMVQFCV*GSNSTRQDRMIAIE
Trigger: CTCAATGGCAATCATTCGGTCCTGTCTAGTACTGTTGCTGCCTCAAACACAGAACTGAACCATAAAACACCAGAAAATTTCAGAGGTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184867.8
3UTR GCA 90 bp TCTGCTGAGCTTCCTATGCTCACGTCTGATGAAGTGCTGACCAGTTaGTTTGATCACAGGATTACATATGAGTTTCTGGTTTCAAGTGTT +
Preference number: 1 (lower is better)
Translates to: SAELPMLTSDEVLTS*FDHRITYEFLVSSV
Trigger: AACACTTGAAACCAGAAACTCATATGTAATCCTGTGATCAAAGCAACTGGTCAGCACTTCATCAGACGTGAGCATAGGAAGCTCAGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR TCA 90 bp GCCTGTCCCGGAGACTCACCAGGAAAAGTCATCTTTGTATTGTACTaGATGCATTCTGTGCTTACTTATCAGCTAACACTTTACAAGTAC +
Preference number: 1 (lower is better)
Translates to: ACPGDSPGKVIFVLY*MHSVLTYQLTLYKY
Trigger: GTACTTGTAAAGTGTTAGCTGATAAGTAAGCACAGAATGCATTCAGTACAATACAAAGATGACTTTTCCTGGTGAGTCTCCGGGACAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR CCA 90 bp TTGTTCTTTCAAAATTCTCCGGTGTCTCTAAGTTACAGAACGACTTaGGATTTTTCTTCTGTGCAGACTGCCACTGCTATTGGCTTTAAG +
Preference number: 1 (lower is better)
Translates to: LFFQNSPVSLSYRTT*DFSSVQTATAIGFK
Trigger: CTTAAAGCCAATAGCAGTGGCAGTCTGCACAGAAGAAAAATCCCAAGTCGTTCTGTAACTTAGAGACACCGGAGAATTTTGAAAGAACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR GCA 90 bp CTCACTCAGTTTTCGATATTTACTCTTCCTGTTGGTAATACTATGTaGGATATAGAACTGGTATCCAAACCAGAAACCAGTATTGCTTCT +
Preference number: 1 (lower is better)
Translates to: LTQFSIFTLPVGNTM*DIELVSKPETSIAS
Trigger: AGAAGCAATACTGGTTTCTGGTTTGGATACCAGTTCTATATCGCACATAGTATTACCAACAGGAAGAGTAAATATCGAAAACTGAGTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184029.2
3UTR TCA 90 bp AATGCAAGTTCAGGGCAGTCAGGGAGACAGACAGAAGCTCTGTTTTaGAAAACTACAAACAAACAAACAAACAAATCTCCAATAAATCAA +
Preference number: 1 (lower is better)
Translates to: NASSGQSGRQTEALF*KTTNKQTNKSPINQ
Trigger: TTGATTTATTGGAGATTTGTTTGTTTGTTTGTTTGTAGTTTTTCAAAACAGAGCTTCTGTCTGTCTCCCTGACTGCCCTGAACTTGCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183404.8
3UTR-3UTR TCA 90 bp GAGAGGGCAAGAGTAGAGCTGTGCGGGGCCGGGGGTGTCATCTTAGCTTGCCCACGTCTGATGAAGTGCTaGCCAGTTGCTTTGATCACA +
Preference number: 2 (lower is better)
Translates to: ERARVELCGAGGVILACPRLMKC*PVALIT
Trigger: TGTGATCAAAGCAACTGGTCAGCACTTCATCAGACG...TGGGCAAGCTAAGATGACACCCCCGGCCCCGCACAGCTCTACTCTTGCCCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183404.8
3UTR-3UTR GCA 90 bp GAGAGGGCAAGAGTAGAGCTGTGCGGGGCCGGGGGTGTCATCTTAGCTTGCCCATTTTCTCTCCCAGGGTaGTGTGGTGGAAGACAGATT +
Preference number: 2 (lower is better)
Translates to: ERARVELCGAGGVILACPFSLPG*CGGRQI
Trigger: AATCTGTCTTCCACCACAGCACCCTGGGAGAGAAAA...TGGGCAAGCTAAGATGACACCCCCGGCCCCGCACAGCTCTACTCTTGCCCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000183404.8
3UTR CAA 90 bp GGGTTGGTAGACTCACTAAGCCCAGGATGGGCTCCTGGCAACGTGTaGGGCGGCTCTGCTGACGCAGCAGAGACTTTTTCTTCTTCTCTT +
Preference number: 2 (lower is better)
Translates to: GLVDSLSPGWAPGNV*GGSADAAETFSSSL
Trigger: AAGAGAAGAAGAAAAAGTCTCTGCTGCGTCAGCAGAGCCGCCCAACACGTTGCCAGGAGCCCATCCTGGGCTTAGTGAGTCTACCAACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184867.8
3UTR-3UTR TCA 90 bp GAGTATGTGAGGCGGCAACATATGGTGAGCTGCTGGTACTACCACGGTGGAAGCTGTTCCAGGCTTTCCTaGAGAAGACAGCTGTGCCGG +
Preference number: 2 (lower is better)
Translates to: EYVRRQHMVSCWYYHGGSCSRLS*RRQLCR
Trigger: CCGGCACAGCTGTCTTCTTCAGGAAAGCCTGGAACA...GCTTCCACCGTGGTAGTACCAGCAGCTCACCATATGTTGCCGCCTCACATACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000183647.8
ENSMUST00000184416.8
3UTR-3UTR GCA 90 bp ACTGACAGGTACAGCTCGGTGCTAATCTGGCTCTTCTTGGGGTGGGGGCAGGTGCAAAGCATACAGGACTaGAAGGAGGGTTCTGGACTG +
Preference number: 2 (lower is better)
Translates to: TDRYSSVLIWLFLGWGQVQSIQD*KEGSGL
Trigger: CAGTCCAGAACCCTCCTTGCAGTCCTGTATGCTTTG...CACCTGCCCCCACCCCAAGAAGAGCCAGATTAGCACCGAGCTGTACCTGTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR TCA 90 bp TGGTACTACCACGGTGGAAGCTGGACATTGGCGGAAGACTTGTGTTTATGTCTGGCCGACGGTCTCTGCTaGGCTTCCTATGCTCACGTC +
Preference number: 2 (lower is better)
Translates to: WYYHGGSWTLAEDLCLCLADGLC*ASYAHV
Trigger: GACGTGAGCATAGGAAGCTCAGCAGAGACCGTCGGC...CAGACATAAACACAAGTCTTCCGCCAATGTCCAGCTTCCACCGTGGTAGTACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184867.8
3UTR-3UTR CCA 90 bp GAGGAGTATGTGAGGCGGCAACATATGGTGAGCTGCTGGTACTACCACGGTGGAGAGACATGTGGGATGTaGAGGTCCCCAGAATTCCAC +
Preference number: 2 (lower is better)
Translates to: EEYVRRQHMVSCWYYHGGETCGM*RSPEFH
Trigger: GTGGAATTCTGGGGACCTCCACATCCCACATGTCTC...TCCACCGTGGTAGTACCAGCAGCTCACCATATGTTGCCGCCTCACATACTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000183647.8
ENSMUST00000184378.8
ENSMUST00000184416.8
ENSMUST00000184867.8
3UTR-3UTR TCA 90 bp TCATATGGCGAAGGTCGGAGAGGGCAACAAAGGACTCCCTTCCTTTTTAAGACAGCCGACGGTCTCTGCTaGGCTTCCTATGCTCACGTC +
Preference number: 2 (lower is better)
Translates to: SYGEGRRGQQRTPFLFKTADGLC*ASYAHV
Trigger: GACGTGAGCATAGGAAGCTCAGCAGAGACCGTCGGC...TGTCTTAAAAAGGAAGGGAGTCCTTTGTTGCCCTCTCCGACCTTCGCCATATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR GCA 90 bp ATGTGGGATGTGGAGGTCCCCAGAATTCCACCAAAACCAGGCTGGCTCATCCCACTGCTGAGCTTCCTATaGTCACGTCTGATGAAGTGC +
Preference number: 2 (lower is better)
Translates to: MWDVEVPRIPPKPGWLIPLLSFL*SRLMKC
Trigger: GCACTTCATCAGACGTGAGCATAGGAAGCTCAGCAG...TGGGATGAGCCAGCCTGGTTTTGGTGGAATTCTGGGGACCTCCACATCCCACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184867.8
3UTR-3UTR GCA 90 bp GGGATGTGGAGGTCCCCAGAATTCCACCAAAACCAGGCTGGCTCATCCCATTCGAAATGCTGTCCTGTGTaGAATGCAATGCAGCAGCCA +
Preference number: 2 (lower is better)
Translates to: GMWRSPEFHQNQAGSSHSKCCPV*NAMQQP
Trigger: TGGCTGCTGCATTGCATTGCACACAGGACAGCATTT...CGAATGGGATGAGCCAGCCTGGTTTTGGTGGAATTCTGGGGACCTCCACATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184378.8
3UTR-3UTR CCA 90 bp ACTGACAGGTACAGCTCGGTGCTAATCTGGCTCTTCTTGGGGTGGGGGCAGGTGGGCTATGGTCACAGATaGTGTCTGCTTATCACTTCA +
Preference number: 2 (lower is better)
Translates to: TDRYSSVLIWLFLGWGQVGYGHR*CLLITS
Trigger: TGAAGTGATAAGCAGACACCATCTGTGACCATAGCC...CACCTGCCCCCACCCCAAGAAGAGCCAGATTAGCACCGAGCTGTACCTGTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR CCA 90 bp GCCAACTCAAAGGACAGAAGTAAAGCTAGGGTAAGGAACCGTGACCATTGCTCTTGGCTCTTCTTGGGGTaGGGGCAGGTGGTTTGCAGG +
Preference number: 2 (lower is better)
Translates to: ANSKDRSKARVRNRDHCSWLFLG*GQVVCR
Trigger: CCTGCAAACCACCTGCCCCCACCCCAAGAAGAGCCA...AGAGCAATGGTCACGGTTCCTTACCCTAGCTTTACTTCTGTCCTTTGAGTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR CCA 90 bp TGGGAGGAGTATGTGAGGCGGCAACATATGGTGAGCTGCTGGTACTACCACGGTGGCTGCCATAACTACTaGACTGAGACATGTGGGATG +
Preference number: 2 (lower is better)
Translates to: WEEYVRRQHMVSCWYYHGGCHNY*TETCGM
Trigger: CATCCCACATGTCTCAGTCCAGTAGTTATGGCAGCC...ACCGTGGTAGTACCAGCAGCTCACCATATGTTGCCGCCTCACATACTCCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183647.8
ENSMUST00000184378.8
ENSMUST00000184416.8
ENSMUST00000184867.8
3UTR-3UTR CCA 90 bp ACTGACAGGTACAGCTCGGTGCTAATCTGGCTCTTCTTGGGGTGGGGGCAGGTGCCAATTGATGCATTATaGGATGGTCCCAGCAAACTG +
Preference number: 2 (lower is better)
Translates to: TDRYSSVLIWLFLGWGQVPIDAL*DGPSKL
Trigger: CAGTTTGCTGGGACCATCCCATAATGCATCAATTGG...CACCTGCCCCCACCCCAAGAAGAGCCAGATTAGCACCGAGCTGTACCTGTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000184867.8
3UTR-3UTR TCA 90 bp ACTGACAGGTACAGCTCGGTGCTAATCTGGCTCTTCTTGGGGTGGGGGCAGGTGGTTGTCCAAATCTTATaGGGAGAGGTCACCTTCTAT +
Preference number: 2 (lower is better)
Translates to: TDRYSSVLIWLFLGWGQVVVQIL*GEVTFY
Trigger: ATAGAAGGTGACCTCTCCTCATAAGATTTGGACAAC...CACCTGCCCCCACCCCAAGAAGAGCCAGATTAGCACCGAGCTGTACCTGTCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR TCA 90 bp GAATTCCACCAAAACCAGGCTGGCTCATCCCATTCGATGAACTCCAAAGGTCAGTGTTCCAGGCTTTCCTaGAGAAGACAGCTGTGCCGG +
Preference number: 2 (lower is better)
Translates to: EFHQNQAGSSHSMNSKGQCSRLS*RRQLCR
Trigger: CCGGCACAGCTGTCTTCTTCAGGAAAGCCTGGAACA...CTGACCTTTGGAGTTCATCGAATGGGATGAGCCAGCCTGGTTTTGGTGGAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000183647.8
ENSMUST00000184416.8
3UTR-3UTR TCA 90 bp GAGTATGTGAGGCGGCAACATATGGTGAGCTGCTGGTACTACCACGGTGGAAGCACTCAAGCGGTCATGTaGATGAAGGCTGCCATAACT +
Preference number: 2 (lower is better)
Translates to: EYVRRQHMVSCWYYHGGSTQAVM*MKAAIT
Trigger: AGTTATGGCAGCCTTCATTCACATGACCGCTTGAGT...GCTTCCACCGTGGTAGTACCAGCAGCTCACCATATGTTGCCGCCTCACATACTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183647.8
ENSMUST00000184378.8
ENSMUST00000184416.8
ENSMUST00000184867.8
3UTR-3UTR GCA 90 bp TTACAGATGACCCATAGGGTTGGTAGACTCACTAAGCCCAGGATGGGCTCCTGGTCTCTTAAGGCAGGCTaGTTTGGGGTTGAGGTTCCT +
Preference number: 2 (lower is better)
Translates to: LQMTHRVGRLTKPRMGSWSLKAG*FGVEVP
Trigger: AGGAACCTCAACCCCAAAGCAGCCTGCCTTAAGAGA...CCAGGAGCCCATCCTGGGCTTAGTGAGTCTACCAACCCTATGGGTCATCTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184867.8
3UTR-3UTR CCA 90 bp ACTGACAGGTACAGCTCGGTGCTAATCTGGCTCTTCTTGGGGTGGGGGCAGGTGAAAGCAATGTTTATTTaGGGGCAAATCCAGGGGACA +
Preference number: 2 (lower is better)
Translates to: TDRYSSVLIWLFLGWGQVKAMFI*GQIQGT
Trigger: TGTCCCCTGGATTTGCCCCCAAATAAACATTGCTTT...CACCTGCCCCCACCCCAAGAAGAGCCAGATTAGCACCGAGCTGTACCTGTCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR CCA 90 bp CATCACCCGTCTGTGAGCTTCCAGCAGCATTCCCTCTGGTTCCTAGGATGCTATCCACCAAAACCAGGCTaGCTCATCCCATTCGATGAA +
Preference number: 2 (lower is better)
Translates to: HHPSVSFQQHSLWFLGCYPPKPG*LIPFDE
Trigger: TTCATCGAATGGGATGAGCCAGCCTGGTTTTGGTGG...ATAGCATCCTAGGAACCAGAGGGAATGCTGCTGGAAGCTCACAGACGGGTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000184378.8
ENSMUST00000184416.8
ENSMUST00000184867.8
3UTR-3UTR TCA 90 bp TATGGTGAGCTGCTGGTACTACCACGGTGGAAGCTGGACATTGGCGGAAGACTTACTCAAGCGGTCATGTaGATGAAGGCTGCCATAACT +
Preference number: 2 (lower is better)
Translates to: YGELLVLPRWKLDIGGRLTQAVM*MKAAIT
Trigger: AGTTATGGCAGCCTTCATTCACATGACCGCTTGAGT...AAGTCTTCCGCCAATGTCCAGCTTCCACCGTGGTAGTACCAGCAGCTCACCATA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183647.8
ENSMUST00000184378.8
ENSMUST00000184416.8
ENSMUST00000184867.8
3UTR-3UTR GCA 90 bp CACGGACCAGCCAACTCAAAGGACAGAAGTAAAGCTAGGGTAAGGAACCGTGACCTGCTGAGCTTCCTATaGTCACGTCTGATGAAGTGC +
Preference number: 2 (lower is better)
Translates to: HGPANSKDRSKARVRNRDLLSFL*SRLMKC
Trigger: GCACTTCATCAGACGTGAGCATAGGAAGCTCAGCAG...GTCACGGTTCCTTACCCTAGCTTTACTTCTGTCCTTTGAGTTGGCTGGTCCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR GCA 90 bp CACGGACCAGCCAACTCAAAGGACAGAAGTAAAGCTAGGGTAAGGAACCGTGACCAAAGCATACAGGACTaGAAGGAGGGTTCTGGACTG +
Preference number: 2 (lower is better)
Translates to: HGPANSKDRSKARVRNRDQSIQD*KEGSGL
Trigger: CAGTCCAGAACCCTCCTTGCAGTCCTGTATGCTTTG...GTCACGGTTCCTTACCCTAGCTTTACTTCTGTCCTTTGAGTTGGCTGGTCCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR GCA 90 bp CACCCGTCTGTGAGCTTCCAGCAGCATTCCCTCTGGTTCCTAGGATGCTATCTGCATGTGAATGAAGGCTaGCATAACTACTGGACTGAG +
Preference number: 2 (lower is better)
Translates to: HPSVSFQQHSLWFLGCYLHVNEG*HNYWTE
Trigger: CTCAGTCCAGTAGTTATGGCAGCCTTCATTCACATG...CAGATAGCATCCTAGGAACCAGAGGGAATGCTGCTGGAAGCTCACAGACGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000184378.8
ENSMUST00000184416.8
ENSMUST00000184867.8
3UTR-3UTR GCA 90 bp GTATGTGAGGCGGCAACATATGGTGAGCTGCTGGTACTACCACGGTGGAAGCTGCATGTGAATGAAGGCTaGCATAACTACTGGACTGAG +
Preference number: 2 (lower is better)
Translates to: VCEAATYGELLVLPRWKLHVNEG*HNYWTE
Trigger: CTCAGTCCAGTAGTTATGGCAGCCTTCATTCACATG...CAGCTTCCACCGTGGTAGTACCAGCAGCTCACCATATGTTGCCGCCTCACATAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183647.8
ENSMUST00000184378.8
ENSMUST00000184416.8
ENSMUST00000184867.8
3UTR-3UTR CCA 90 bp TTAAGGAGTTACTTAGCCAAGACCATCACGCTTAGCATGTTTTTCTCTCCCAGGTGGCTCTTCTTGGGGTaGGGGCAGGTGGTTTGCAGG +
Preference number: 2 (lower is better)
Translates to: LRSYLAKTITLSMFFSPRWLFLG*GQVVCR
Trigger: CCTGCAAACCACCTGCCCCCACCCCAAGAAGAGCCA...CCTGGGAGAGAAAAACATGCTAAGCGTGATGGTCTTGGCTAAGTAACTCCTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR CCA 90 bp ACTACCACGGTGGAAGCTGGACATTGGCGGAAGACTTGTGTTTATGTCTGTTGGGAGACATGTGGGATGTaGAGGTCCCCAGAATTCCAC +
Preference number: 2 (lower is better)
Translates to: TTTVEAGHWRKTCVYVCWETCGM*RSPEFH
Trigger: GTGGAATTCTGGGGACCTCCACATCCCACATGTCTC...CCAACAGACATAAACACAAGTCTTCCGCCAATGTCCAGCTTCCACCGTGGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000183647.8
ENSMUST00000184378.8
ENSMUST00000184416.8
ENSMUST00000184867.8
3UTR-3UTR CCA 90 bp TTGATGGGAGGAGTATGTGAGGCGGCAACATATGGTGAGCTGCTGGTACTACCAGGCTGCCATAACTACTaGACTGAGACATGTGGGATG +
Preference number: 2 (lower is better)
Translates to: LMGGVCEAATYGELLVLPGCHNY*TETCGM
Trigger: CATCCCACATGTCTCAGTCCAGTAGTTATGGCAGCC...TGGTAGTACCAGCAGCTCACCATATGTTGCCGCCTCACATACTCCTCCCATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183647.8
ENSMUST00000184378.8
ENSMUST00000184416.8
ENSMUST00000184867.8
3UTR-3UTR CCA 90 bp CTACAATGCAAGTTCAGGGCAGTCAGGGAGACAGACAGAAGCTCTGTTTTGAAATGCTCTCAGTGGGCTTaGACACAGGATGTGCCTGGG +
Preference number: 2 (lower is better)
Translates to: LQCKFRAVRETDRSSVLKCSQWA*TQDVPG
Trigger: CCCAGGCACATCCTGTGTCCAAGCCCACTGAGAGCA...TTTCAAAACAGAGCTTCTGTCTGTCTCCCTGACTGCCCTGAACTTGCATTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183404.8
3UTR CAA 90 bp CAACATATGGTGAGCTGCTGGTACTACCACGGTGGAAGCTGGACATaGGCGGAAGACTTGTGTTTATGTCTGTTGGTGACACTGAGTGTG +
Preference number: 2 (lower is better)
Translates to: QHMVSCWYYHGGSWT*AEDLCLCLLVTLSV
Trigger: CACACTCAGTGTCACCAACAGACATAAACACAAGTCTTCCGCCAATGTCCAGCTTCCACCGTGGTAGTACCAGCAGCTCACCATATGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183647.8
ENSMUST00000184378.8
ENSMUST00000184416.8
ENSMUST00000184867.8
3UTR-3UTR TCA 90 bp TTAAGTCTTGACCTGCTCTCAGTGGGCTTGGACACAGGATGTGCCTGGGCTCCTATCACTTCAAGGACATaGACAAAGCATACAGGACTG +
Preference number: 2 (lower is better)
Translates to: LSLDLLSVGLDTGCAWAPITSRT*TKHTGL
Trigger: CAGTCCTGTATGCTTTGTTCATGTCCTTGAAGTGAT...AGGAGCCCAGGCACATCCTGTGTCCAAGCCCACTGAGAGCAGGTCAAGACTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183404.8
3UTR-3UTR TCA 90 bp GGGAGATGGGTAACTAGGAGATTCACGGTTGAAATCGTCAGAATTTGGGGATGGACTAGACTGACAGCCTaGGAGTCCAGAGTCTCTGCT +
Preference number: 2 (lower is better)
Translates to: GRWVTRRFTVEIVRIWGWTRLTA*ESRVSA
Trigger: AGCAGAGACTCTGGACTCTCAGGCTGTCAGTCTAGT...CCATCCCCAAATTCTGACGATTTCAACCGTGAATCTCCTAGTTACCCATCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000183594.2
ENSMUST00000184107.8
3UTR-3UTR GCA 90 bp TTAAGTCTTGACCTGCTCTCAGTGGGCTTGGACACAGGATGTGCCTGGGCTCCTGAAGTGCTGACCAGTTaGTTTGATCACAGGATTACA +
Preference number: 2 (lower is better)
Translates to: LSLDLLSVGLDTGCAWAPEVLTS*FDHRIT
Trigger: TGTAATCCTGTGATCAAAGCAACTGGTCAGCACTTC...AGGAGCCCAGGCACATCCTGTGTCCAAGCCCACTGAGAGCAGGTCAAGACTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183404.8
3UTR-3UTR GCA 90 bp TCATATGGCGAAGGTCGGAGAGGGCAACAAAGGACTCCCTTCCTTTTTAAGACACTAAGGGCCAATGGTTaGCACTGCTCTGTGAACAGC +
Preference number: 2 (lower is better)
Translates to: SYGEGRRGQQRTPFLFKTLRANG*HCSVNS
Trigger: GCTGTTCACAGAGCAGTGGCAACCATTGGCCCTTAG...TGTCTTAAAAAGGAAGGGAGTCCTTTGTTGCCCTCTCCGACCTTCGCCATATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR GCA 90 bp ACATATGGTGAGCTGCTGGTACTACCACGGTGGAAGCTGGACATTGGCGGAAGACATGTGAATGAAGGCTaGCATAACTACTGGACTGAG +
Preference number: 2 (lower is better)
Translates to: TYGELLVLPRWKLDIGGRHVNEG*HNYWTE
Trigger: CTCAGTCCAGTAGTTATGGCAGCCTTCATTCACATG...TCTTCCGCCAATGTCCAGCTTCCACCGTGGTAGTACCAGCAGCTCACCATATGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183647.8
ENSMUST00000184378.8
ENSMUST00000184416.8
ENSMUST00000184867.8
3UTR-3UTR GCA 90 bp CTTGGGAGATGGGTAACTAGGAGATTCACGGTTGAAATCGTCAGAATTTGGGGACAGGAGACTAGACCATaGTCTGCAAGGAAGCCCAGC +
Preference number: 2 (lower is better)
Translates to: LGRWVTRRFTVEIVRIWGQETRP*SARKPS
Trigger: GCTGGGCTTCCTTGCAGAGCATGGTCTAGTCTCCTG...TCCCCAAATTCTGACGATTTCAACCGTGAATCTCCTAGTTACCCATCTCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183647.8
3UTR-3UTR CCA 90 bp GCGGTCTTCTTCTCGAACTTGTGGCAGAGAATGAGTAGTATGGTGTTCCAGGCTGTTCATGAAAGGTGTTaGGGACAAGCCTTCGTGGGT +
Preference number: 2 (lower is better)
Translates to: AVFFSNLWQRMSSMVFQAVHERC*GQAFVG
Trigger: ACCCACGAAGGCTTGTCCCCAACACCTTTCATGAAC...AGCCTGGAACACCATACTACTCATTCTCTGCCACAAGTTCGAGAAGAAGACCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000183594.2
ENSMUST00000184107.8
3UTR-3UTR TCA 90 bp AAGGACATGAACAAAGCATACAGGACTGCAAGGAGGGTTCTGGACTGTGACCATAATGCTGGCATCAGCTaGGTGTACATCAGCTTCCCA +
Preference number: 2 (lower is better)
Translates to: KDMNKAYRTARRVLDCDHNAGIS*VYISFP
Trigger: TGGGAAGCTGATGTACACTCAGCTGATGCCAGCATT...ATGGTCACAGTCCAGAACCCTCCTTGCAGTCCTGTATGCTTTGTTCATGTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR TCA 90 bp GCCAACTCAAAGGACAGAAGTAAAGCTAGGGTAAGGAACCGTGACCATTGCTCTAATGCTGGCATCAGCTaGGTGTACATCAGCTTCCCA +
Preference number: 2 (lower is better)
Translates to: ANSKDRSKARVRNRDHCSNAGIS*VYISFP
Trigger: TGGGAAGCTGATGTACACTCAGCTGATGCCAGCATT...AGAGCAATGGTCACGGTTCCTTACCCTAGCTTTACTTCTGTCCTTTGAGTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR TCA 90 bp TGCTGGTACTACCACGGTGGAAGCTGGACATTGGCGGAAGACTTGTGTTTATGTACTCAAGCGGTCATGTaGATGAAGGCTGCCATAACT +
Preference number: 2 (lower is better)
Translates to: CWYYHGGSWTLAEDLCLCTQAVM*MKAAIT
Trigger: AGTTATGGCAGCCTTCATTCACATGACCGCTTGAGT...ACATAAACACAAGTCTTCCGCCAATGTCCAGCTTCCACCGTGGTAGTACCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183647.8
ENSMUST00000184378.8
ENSMUST00000184416.8
ENSMUST00000184867.8
3UTR-3UTR GCA 90 bp ACACTAACAGGTATGCCGGGAATGCTAAGGGCCAATGGTTGCCACTGCTCTGTGGAAGTGCTGACCAGTTaGTTTGATCACAGGATTACA +
Preference number: 2 (lower is better)
Translates to: TLTGMPGMLRANGCHCSVEVLTS*FDHRIT
Trigger: TGTAATCCTGTGATCAAAGCAACTGGTCAGCACTTC...CACAGAGCAGTGGCAACCATTGGCCCTTAGCATTCCCGGCATACCTGTTAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR GCA 90 bp AGTTACAGAACGACTTGGGATTTTTCTTCTGTGCAGACTGCCACTGCTATTGGCCTAAGGGCCAATGGTTaGCACTGCTCTGTGAACAGC +
Preference number: 2 (lower is better)
Translates to: SYRTTWDFSSVQTATAIGLRANG*HCSVNS
Trigger: GCTGTTCACAGAGCAGTGGCAACCATTGGCCCTTAG...GCCAATAGCAGTGGCAGTCTGCACAGAAGAAAAATCCCAAGTCGTTCTGTAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR GCA 90 bp TCTTCTGTGCAGACTGCCACTGCTATTGGCTTTAAGGAGTTACTTAGCCAAGACCTAAGGGCCAATGGTTaGCACTGCTCTGTGAACAGC +
Preference number: 2 (lower is better)
Translates to: SSVQTATAIGFKELLSQDLRANG*HCSVNS
Trigger: GCTGTTCACAGAGCAGTGGCAACCATTGGCCCTTAG...GTCTTGGCTAAGTAACTCCTTAAAGCCAATAGCAGTGGCAGTCTGCACAGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR GCA 90 bp GCGGTCTTCTTCTCGAACTTGTGGCAGAGAATGAGTAGTATGGTGTTCCAGGCTAGAGTCCAGAGTCTCTaGTGTACAGGGAAAATGAGC +
Preference number: 2 (lower is better)
Translates to: AVFFSNLWQRMSSMVFQARVQSL*CTGKMS
Trigger: GCTCATTTTCCCTGTACAGCAGAGACTCTGGACTCT...AGCCTGGAACACCATACTACTCATTCTCTGCCACAAGTTCGAGAAGAAGACCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000183594.2
ENSMUST00000184107.8
3UTR-3UTR CCA 90 bp CACGGACCAGCCAACTCAAAGGACAGAAGTAAAGCTAGGGTAAGGAACCGTGACCTGCAAGGAGGGTTCTaGACTGTGACCATAAACTAT +
Preference number: 2 (lower is better)
Translates to: HGPANSKDRSKARVRNRDLQGGF*TVTINY
Trigger: ATAGTTTATGGTCACAGTCCAGAACCCTCCTTGCAG...GTCACGGTTCCTTACCCTAGCTTTACTTCTGTCCTTTGAGTTGGCTGGTCCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR CCA 90 bp CCCCACGGACCAGCCAACTCAAAGGACAGAAGTAAAGCTAGGGTAAGGAACCGTAAAGCAATGTTTATTTaGGGGCAAATCCAGGGGACA +
Preference number: 2 (lower is better)
Translates to: PHGPANSKDRSKARVRNRKAMFI*GQIQGT
Trigger: TGTCCCCTGGATTTGCCCCCAAATAAACATTGCTTT...ACGGTTCCTTACCCTAGCTTTACTTCTGTCCTTTGAGTTGGCTGGTCCGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR CCA 90 bp ACTGCTTGTGTGGTCAGGGGAATAAATAGATGCCAAGGCCTTCCCAAGTGCATCGAACATACTGGTTGGTaGCTTGGGAGATGGGTAACT +
Preference number: 2 (lower is better)
Translates to: TACVVRGINRCQGLPKCIEHTGW*LGRWVT
Trigger: AGTTACCCATCTCCCAAGCCACCAACCAGTATGTTC...GATGCACTTGGGAAGGCCTTGGCATCTATTTATTCCCCTGACCACACAAGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184378.8
ENSMUST00000184867.8
3UTR-3UTR CCA 90 bp GGAAGCTGGACATTGGCGGAAGACTTGTGTTTATGTCTGTTGGTGACACTGAGTAGCGAACATACTGGTTaGTGGCTTGGGAGATGGGTA +
Preference number: 2 (lower is better)
Translates to: GSWTLAEDLCLCLLVTLSSEHTG*WLGRWV
Trigger: TACCCATCTCCCAAGCCACCAACCAGTATGTTCGCT...ACTCAGTGTCACCAACAGACATAAACACAAGTCTTCCGCCAATGTCCAGCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183647.8
ENSMUST00000184378.8
ENSMUST00000184416.8
ENSMUST00000184867.8
3UTR-3UTR CCA 90 bp GTGGAGGTCCCCAGAATTCCACCAAAACCAGGCTGGCTCATCCCATTCGATGAAGAAATCGTCAGAATTTaGGGATGGTGCATATACAGG +
Preference number: 2 (lower is better)
Translates to: VEVPRIPPKPGWLIPFDEEIVRI*GWCIYR
Trigger: CCTGTATATGCACCATCCCCAAATTCTGACGATTTC...TTCATCGAATGGGATGAGCCAGCCTGGTTTTGGTGGAATTCTGGGGACCTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184378.8
3UTR CAA 90 bp AAGGATCTAGGGCTACAGAATCATGGAGCGGTCTTCTTCTCGAACTaGTGGCAGAGAATGAGTAGTATGGTGTTCCAGGCTTTCCTGAAG +
Preference number: 2 (lower is better)
Translates to: KDLGLQNHGAVFFSN*WQRMSSMVFQAFLK
Trigger: CTTCAGGAAAGCCTGGAACACCATACTACTCATTCTCTGCCACAAGTTCGAGAAGAAGACCGCTCCATGATTCTGTAGCCCTAGATCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183594.2
ENSMUST00000183647.8
ENSMUST00000184107.8
ENSMUST00000184416.8
3UTR-3UTR TCA 90 bp ACGTTGAGTGGAGAGATGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGATCGTCTGATGAAGTGCTaGCCAGTTGCTTTGATCACA +
Preference number: 2 (lower is better)
Translates to: TLSGEMRQSLIVQKRHTDRLMKC*PVALIT
Trigger: TGTGATCAAAGCAACTGGTCAGCACTTCATCAGACG...ATCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCATCTCTCCACTCAACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR TCA 90 bp TCTTCTGTGCAGACTGCCACTGCTATTGGCTTTAAGGAGTTACTTAGCCAAGACAATGCTGGCATCAGCTaGGTGTACATCAGCTTCCCA +
Preference number: 2 (lower is better)
Translates to: SSVQTATAIGFKELLSQDNAGIS*VYISFP
Trigger: TGGGAAGCTGATGTACACTCAGCTGATGCCAGCATT...GTCTTGGCTAAGTAACTCCTTAAAGCCAATAGCAGTGGCAGTCTGCACAGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR CCA 90 bp AGTTACAGAACGACTTGGGATTTTTCTTCTGTGCAGACTGCCACTGCTATTGGCTCTCCCAGGGTGCTGTaGTGGAAGACAGATTTCATG +
Preference number: 2 (lower is better)
Translates to: SYRTTWDFSSVQTATAIGSPRVL*WKTDFM
Trigger: CATGAAATCTGTCTTCCACCACAGCACCCTGGGAGA...GCCAATAGCAGTGGCAGTCTGCACAGAAGAAAAATCCCAAGTCGTTCTGTAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR CCA 90 bp TTGTGTTTATGTCTGTTGGTGACACTGAGTGTGGAGGATAACTCAAGCGGTCATGAGACATGTGGGATGTaGAGGTCCCCAGAATTCCAC +
Preference number: 2 (lower is better)
Translates to: LCLCLLVTLSVEDNSSGHETCGM*RSPEFH
Trigger: GTGGAATTCTGGGGACCTCCACATCCCACATGTCTC...ATGACCGCTTGAGTTATCCTCCACACTCAGTGTCACCAACAGACATAAACACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000183647.8
ENSMUST00000184378.8
ENSMUST00000184416.8
ENSMUST00000184867.8
3UTR-3UTR TCA 90 bp CCCCACGGACCAGCCAACTCAAAGGACAGAAGTAAAGCTAGGGTAAGGAACCGTTCACAGGATTACATATaGGTTTCTGGTTTCAAGTGT +
Preference number: 2 (lower is better)
Translates to: PHGPANSKDRSKARVRNRSQDYI*VSGFKC
Trigger: ACACTTGAAACCAGAAACTCATATGTAATCCTGTGA...ACGGTTCCTTACCCTAGCTTTACTTCTGTCCTTTGAGTTGGCTGGTCCGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR TCA 90 bp GAATTTCAAAATCCATCAAAAGATGTGATTTGTCAAGATCCTGAGAGGACTCAGGCCGACGGTCTCTGCTaGGCTTCCTATGCTCACGTC +
Preference number: 2 (lower is better)
Translates to: EFQNPSKDVICQDPERTQADGLC*ASYAHV
Trigger: GACGTGAGCATAGGAAGCTCAGCAGAGACCGTCGGC...CTGAGTCCTCTCAGGATCTTGACAAATCACATCTTTTGATGGATTTTGAAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183404.8
3UTR-3UTR TCA 90 bp TTAAGGAGTTACTTAGCCAAGACCATCACGCTTAGCATGTTTTTCTCTCCCAGGAATGCTGGCATCAGCTaGGTGTACATCAGCTTCCCA +
Preference number: 2 (lower is better)
Translates to: LRSYLAKTITLSMFFSPRNAGIS*VYISFP
Trigger: TGGGAAGCTGATGTACACTCAGCTGATGCCAGCATT...CCTGGGAGAGAAAAACATGCTAAGCGTGATGGTCTTGGCTAAGTAACTCCTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR GCA 90 bp CATTTGTCAATTCAGTTTAGGCACAAGGCAACTTCCACGTTGAGTGGAGAGATGCTGCTGAGCTTCCTATaGTCACGTCTGATGAAGTGC +
Preference number: 2 (lower is better)
Translates to: HLSIQFRHKATSTLSGEMLLSFL*SRLMKC
Trigger: GCACTTCATCAGACGTGAGCATAGGAAGCTCAGCAG...CATCTCTCCACTCAACGTGGAAGTTGCCTTGTGCCTAAACTGAATTGACAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR GCA 90 bp GTGTTCACCAGAGTCCTGATGGAGGATCTGAAGTGCTGTCTTCATGGTTTTTGTTTTTCTCTCCCAGGGTaGTGTGGTGGAAGACAGATT +
Preference number: 2 (lower is better)
Translates to: VFTRVLMEDLKCCLHGFCFSLPG*CGGRQI
Trigger: AATCTGTCTTCCACCACAGCACCCTGGGAGAGAAAA...ACAAAAACCATGAAGACAGCACTTCAGATCCTCCATCAGGACTCTGGTGAACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR CCA 90 bp AGTTACAGAACGACTTGGGATTTTTCTTCTGTGCAGACTGCCACTGCTATTGGCAATGCTAAGGGCCAATaGTTGCCACTGCTCTGTGAA +
Preference number: 2 (lower is better)
Translates to: SYRTTWDFSSVQTATAIGNAKGQ*LPLLCE
Trigger: TTCACAGAGCAGTGGCAACCATTGGCCCTTAGCATT...GCCAATAGCAGTGGCAGTCTGCACAGAAGAAAAATCCCAAGTCGTTCTGTAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR CCA 90 bp TTAAGGAGTTACTTAGCCAAGACCATCACGCTTAGCATGTTTTTCTCTCCCAGGGGCTGCCATAACTACTaGACTGAGACATGTGGGATG +
Preference number: 2 (lower is better)
Translates to: LRSYLAKTITLSMFFSPRGCHNY*TETCGM
Trigger: CATCCCACATGTCTCAGTCCAGTAGTTATGGCAGCC...CCTGGGAGAGAAAAACATGCTAAGCGTGATGGTCTTGGCTAAGTAACTCCTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000184867.8
3UTR-3UTR CCA 90 bp TTCAAGGACATGAACAAAGCATACAGGACTGCAAGGAGGGTTCTGGACTGTGACGTGGAAGCTGGACATTaGCGGAAGACTTGTGTTTAT +
Preference number: 2 (lower is better)
Translates to: FKDMNKAYRTARRVLDCDVEAGH*RKTCVY
Trigger: ATAAACACAAGTCTTCCGCCAATGTCCAGCTTCCAC...GTCACAGTCCAGAACCCTCCTTGCAGTCCTGTATGCTTTGTTCATGTCCTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184867.8
3UTR CAA 90 bp ACAATGCATTTGTCAATTCAGTTTAGGCACAAGGCAACTTCCACGTaGAGTGGAGAGATGAGACAGTCTCTGATTGTGCAGAAGCGACAC +
Preference number: 2 (lower is better)
Translates to: TMHLSIQFRHKATST*SGEMRQSLIVQKRH
Trigger: GTGTCGCTTCTGCACAATCAGAGACTGTCTCATCTCTCCACTCAACGTGGAAGTTGCCTTGTGCCTAAACTGAATTGACAAATGCATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR CAA 90 bp ACAGAACGACTTGGGATTTTTCTTCTGTGCAGACTGCCACTGCTATaGGCTTTAAGGAGTTACTTAGCCAAGACCATCACGCTTAGCATG +
Preference number: 2 (lower is better)
Translates to: TERLGIFLLCRLPLL*ALRSYLAKTITLSM
Trigger: CATGCTAAGCGTGATGGTCTTGGCTAAGTAACTCCTTAAAGCCAATAGCAGTGGCAGTCTGCACAGAAGAAAAATCCCAAGTCGTTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR CAA 90 bp TCCTCGTCTTCATTGGTACTGCTTGTTCTGCCCCTAGATGAGACCTaGATGTCTTTCTGGGAGGACTCATCATCTGATTTCATGTCATCT +
Preference number: 2 (lower is better)
Translates to: SSSSLVLLVLPLDET*MSFWEDSSSDFMSS
Trigger: AGATGACATGAAATCAGATGATGAGTCCTCCCAGAAAGACATCAAGGTCTCATCTAGGGGCAGAACAAGCAGTACCAATGAAGACGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184867.8
3UTR-3UTR TCA 90 bp ACGTTGAGTGGAGAGATGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGATGTTGTCCAAATCTTATaGGGAGAGGTCACCTTCTAT +
Preference number: 2 (lower is better)
Translates to: TLSGEMRQSLIVQKRHTDVVQIL*GEVTFY
Trigger: ATAGAAGGTGACCTCTCCTCATAAGATTTGGACAAC...ATCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCATCTCTCCACTCAACGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR TCA 90 bp TGTGTTCCGACCATCGAAGCTGATCGACTATTTGTAACAAGGCTGGATCCTCCAGTTGTCCAAATCTTATaGGGAGAGGTCACCTTCTAT +
Preference number: 2 (lower is better)
Translates to: CVPTIEADRLFVTRLDPPVVQIL*GEVTFY
Trigger: ATAGAAGGTGACCTCTCCTCATAAGATTTGGACAAC...TGGAGGATCCAGCCTTGTTACAAATAGTCGATCAGCTTCGATGGTCGGAACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184867.8
3UTR-3UTR TCA 90 bp GTCCCGGAGACTCACCAGGAAAAGTCATCTTTGTATTGTACTGAATGCATTCTGCGTCTGATGAAGTGCTaGCCAGTTGCTTTGATCACA +
Preference number: 2 (lower is better)
Translates to: VPETHQEKSSLYCTECILRLMKC*PVALIT
Trigger: TGTGATCAAAGCAACTGGTCAGCACTTCATCAGACG...CAGAATGCATTCAGTACAATACAAAGATGACTTTTCCTGGTGAGTCTCCGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR TCA 90 bp CATTTGTCAATTCAGTTTAGGCACAAGGCAACTTCCACGTTGAGTGGAGAGATGCGTCTGATGAAGTGCTaGCCAGTTGCTTTGATCACA +
Preference number: 2 (lower is better)
Translates to: HLSIQFRHKATSTLSGEMRLMKC*PVALIT
Trigger: TGTGATCAAAGCAACTGGTCAGCACTTCATCAGACG...CATCTCTCCACTCAACGTGGAAGTTGCCTTGTGCCTAAACTGAATTGACAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR TCA 90 bp TTGTGTTTATGTCTGTTGGTGACACTGAGTGTGGAGGATAACTCAAGCGGTCATCGTCTGATGAAGTGCTaGCCAGTTGCTTTGATCACA +
Preference number: 2 (lower is better)
Translates to: LCLCLLVTLSVEDNSSGHRLMKC*PVALIT
Trigger: TGTGATCAAAGCAACTGGTCAGCACTTCATCAGACG...ATGACCGCTTGAGTTATCCTCCACACTCAGTGTCACCAACAGACATAAACACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184867.8
3UTR-3UTR TCA 90 bp CTTGTAAGTTACACTTCTTGCTATTATAGCTTTACTATGAAACCTAGAAGCCTGGCCGACGGTCTCTGCTaGGCTTCCTATGCTCACGTC +
Preference number: 2 (lower is better)
Translates to: LVSYTSCYYSFTMKPRSLADGLC*ASYAHV
Trigger: GACGTGAGCATAGGAAGCTCAGCAGAGACCGTCGGC...CAGGCTTCTAGGTTTCATAGTAAAGCTATAATAGCAAGAAGTGTAACTTACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR TCA 90 bp GCCAACTCAAAGGACAGAAGTAAAGCTAGGGTAAGGAACCGTGACCATTGCTCTATCACTTCAAGGACATaGACAAAGCATACAGGACTG +
Preference number: 2 (lower is better)
Translates to: ANSKDRSKARVRNRDHCSITSRT*TKHTGL
Trigger: CAGTCCTGTATGCTTTGTTCATGTCCTTGAAGTGAT...AGAGCAATGGTCACGGTTCCTTACCCTAGCTTTACTTCTGTCCTTTGAGTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR GCA 90 bp TCATATGGCGAAGGTCGGAGAGGGCAACAAAGGACTCCCTTCCTTTTTAAGACAGAAGTGCTGACCAGTTaGTTTGATCACAGGATTACA +
Preference number: 2 (lower is better)
Translates to: SYGEGRRGQQRTPFLFKTEVLTS*FDHRIT
Trigger: TGTAATCCTGTGATCAAAGCAACTGGTCAGCACTTC...TGTCTTAAAAAGGAAGGGAGTCCTTTGTTGCCCTCTCCGACCTTCGCCATATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR GCA 90 bp TTTTTCCTATTTCATGGAAATCACTATTCATATGGCGAAGGTCGGAGAGGGCAACTAAGGGCCAATGGTTaGCACTGCTCTGTGAACAGC +
Preference number: 2 (lower is better)
Translates to: FFLFHGNHYSYGEGRRGQLRANG*HCSVNS
Trigger: GCTGTTCACAGAGCAGTGGCAACCATTGGCCCTTAG...TTGCCCTCTCCGACCTTCGCCATATGAATAGTGATTTCCATGAAATAGGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR GCA 90 bp GTCCCGGAGACTCACCAGGAAAAGTCATCTTTGTATTGTACTGAATGCATTCTGTTTTCTCTCCCAGGGTaGTGTGGTGGAAGACAGATT +
Preference number: 2 (lower is better)
Translates to: VPETHQEKSSLYCTECILFSLPG*CGGRQI
Trigger: AATCTGTCTTCCACCACAGCACCCTGGGAGAGAAAA...CAGAATGCATTCAGTACAATACAAAGATGACTTTTCCTGGTGAGTCTCCGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR CCA 90 bp AGTTACAGAACGACTTGGGATTTTTCTTCTGTGCAGACTGCCACTGCTATTGGCAACTTCCACGTTGAGTaGAGAGATGAGACAGTCTCT +
Preference number: 2 (lower is better)
Translates to: SYRTTWDFSSVQTATAIGNFHVE*RDETVS
Trigger: AGAGACTGTCTCATCTCTCCACTCAACGTGGAAGTT...GCCAATAGCAGTGGCAGTCTGCACAGAAGAAAAATCCCAAGTCGTTCTGTAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR CCA 90 bp TTCCTTAGAAGCTACACAGAGGGAAGAGAATTGAAGGCAGGTAGGGCTTGTAGAGGCTATGGTCACAGATaGTGTCTGCTTATCACTTCA +
Preference number: 2 (lower is better)
Translates to: FLRSYTEGRELKAGRACRGYGHR*CLLITS
Trigger: TGAAGTGATAAGCAGACACCATCTGTGACCATAGCC...TCTACAAGCCCTACCTGCCTTCAATTCTCTTCCCTCTGTGTAGCTTCTAAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183404.8
3UTR-3UTR CCA 90 bp GTGTTCACCAGAGTCCTGATGGAGGATCTGAAGTGCTGTCTTCATGGTTTTTGTGGCTATGGTCACAGATaGTGTCTGCTTATCACTTCA +
Preference number: 2 (lower is better)
Translates to: VFTRVLMEDLKCCLHGFCGYGHR*CLLITS
Trigger: TGAAGTGATAAGCAGACACCATCTGTGACCATAGCC...ACAAAAACCATGAAGACAGCACTTCAGATCCTCCATCAGGACTCTGGTGAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR CCA 90 bp TCTTGCATAAAGAAAGTGCTAGCGAACATACTGGTTGGTGGCTTGGGAGATGGGGTCAGAATTTGGGGATaGTGCATATACAGAAGAAGG +
Preference number: 2 (lower is better)
Translates to: SCIKKVLANILVGGLGDGVRIWG*CIYRRR
Trigger: CCTTCTTCTGTATATGCACCATCCCCAAATTCTGAC...CCCATCTCCCAAGCCACCAACCAGTATGTTCGCTAGCACTTTCTTTATGCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000183647.8
ENSMUST00000184107.8
ENSMUST00000184416.8
3UTR-3UTR CCA 90 bp GCCAACTCAAAGGACAGAAGTAAAGCTAGGGTAAGGAACCGTGACCATTGCTCTACCTTGATGTCTTTCTaGGAGGACTCATCATCTGAT +
Preference number: 2 (lower is better)
Translates to: ANSKDRSKARVRNRDHCSTLMSF*EDSSSD
Trigger: ATCAGATGATGAGTCCTCCCAGAAAGACATCAAGGT...AGAGCAATGGTCACGGTTCCTTACCCTAGCTTTACTTCTGTCCTTTGAGTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184867.8
3UTR-3UTR TCA 90 bp TCTTCTGTGCAGACTGCCACTGCTATTGGCTTTAAGGAGTTACTTAGCCAAGACGTTGTCCAAATCTTATaGGGAGAGGTCACCTTCTAT +
Preference number: 2 (lower is better)
Translates to: SSVQTATAIGFKELLSQDVVQIL*GEVTFY
Trigger: ATAGAAGGTGACCTCTCCTCATAAGATTTGGACAAC...GTCTTGGCTAAGTAACTCCTTAAAGCCAATAGCAGTGGCAGTCTGCACAGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR TCA 90 bp CTACAATGCAAGTTCAGGGCAGTCAGGGAGACAGACAGAAGCTCTGTTTTGAAAGTTGTCCAAATCTTATaGGGAGAGGTCACCTTCTAT +
Preference number: 2 (lower is better)
Translates to: LQCKFRAVRETDRSSVLKVVQIL*GEVTFY
Trigger: ATAGAAGGTGACCTCTCCTCATAAGATTTGGACAAC...TTTCAAAACAGAGCTTCTGTCTGTCTCCCTGACTGCCCTGAACTTGCATTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183404.8
3UTR-3UTR TCA 90 bp TTCAAGGACATGAACAAAGCATACAGGACTGCAAGGAGGGTTCTGGACTGTGACCATCAGCTTCCCACATaGACTTTTCCCTTTATATGT +
Preference number: 2 (lower is better)
Translates to: FKDMNKAYRTARRVLDCDHQLPT*TFPFIC
Trigger: ACATATAAAGGGAAAAGTTCATGTGGGAAGCTGATG...GTCACAGTCCAGAACCCTCCTTGCAGTCCTGTATGCTTTGTTCATGTCCTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR GCA 90 bp ATCTTGCATAAAGAAAGTGCTAGCGAACATACTGGTTGGTGGCTTGGGAGATGGGAAGTGCTGACCAGTTaGTTTGATCACAGGATTACA +
Preference number: 2 (lower is better)
Translates to: ILHKESASEHTGWWLGRWEVLTS*FDHRIT
Trigger: TGTAATCCTGTGATCAAAGCAACTGGTCAGCACTTC...CCATCTCCCAAGCCACCAACCAGTATGTTCGCTAGCACTTTCTTTATGCAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184867.8
3UTR-3UTR GCA 90 bp TCTTCTGTGCAGACTGCCACTGCTATTGGCTTTAAGGAGTTACTTAGCCAAGACGTCACAGATGGTGTCTaGTTATCACTTCAAGGACAT +
Preference number: 2 (lower is better)
Translates to: SSVQTATAIGFKELLSQDVTDGV*LSLQGH
Trigger: ATGTCCTTGAAGTGATAAGCAGACACCATCTGTGAC...GTCTTGGCTAAGTAACTCCTTAAAGCCAATAGCAGTGGCAGTCTGCACAGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR GCA 90 bp AGAGGTGAAGGAGATCCCACTGGTGTTGATGGGTTTGATGGAAAACTACTGCTTCAGGTGATAAGAAAATaGTGTCCTGTGTGCAATGCA +
Preference number: 2 (lower is better)
Translates to: RGEGDPTGVDGFDGKLLLQVIRK*CPVCNA
Trigger: TGCATTGCACACAGGACAGCATTTTCTTATCACCTG...AAGCAGTAGTTTTCCATCAAACCCATCAACACCAGTGGGATCTCCTTCACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184378.8
3UTR-3UTR CCA 90 bp GCTTTAACAATGCTGGCATCAGCTGAGTGTACATCAGCTTCCCACATGAACTTTAACTTCCACGTTGAGTaGAGAGATGAGACAGTCTCT +
Preference number: 2 (lower is better)
Translates to: ALTMLASAECTSASHMNFNFHVE*RDETVS
Trigger: AGAGACTGTCTCATCTCTCCACTCAACGTGGAAGTT...AAAGTTCATGTGGGAAGCTGATGTACACTCAGCTGATGCCAGCATTGTTAAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR CCA 90 bp GTCCCGGAGACTCACCAGGAAAAGTCATCTTTGTATTGTACTGAATGCATTCTGCTGCAAGGAGGGTTCTaGACTGTGACCATAAACTAT +
Preference number: 2 (lower is better)
Translates to: VPETHQEKSSLYCTECILLQGGF*TVTINY
Trigger: ATAGTTTATGGTCACAGTCCAGAACCCTCCTTGCAG...CAGAATGCATTCAGTACAATACAAAGATGACTTTTCCTGGTGAGTCTCCGGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR CCA 90 bp TTTTTCCTATTTCATGGAAATCACTATTCATATGGCGAAGGTCGGAGAGGGCAACCCAGGGTGCTGTGGTaGAAGACAGATTTCATGGAA +
Preference number: 2 (lower is better)
Translates to: FFLFHGNHYSYGEGRRGQPRVLW*KTDFME
Trigger: TTCCATGAAATCTGTCTTCCACCACAGCACCCTGGG...TTGCCCTCTCCGACCTTCGCCATATGAATAGTGATTTCCATGAAATAGGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR CCA 90 bp GTAACTAGGAGATTCACGGTTGAAATCGTCAGAATTTGGGGATGGTGCATATACGTCAGAATTTGGGGATaGTGCATATACAGGGCCCTT +
Preference number: 2 (lower is better)
Translates to: VTRRFTVEIVRIWGWCIYVRIWG*CIYRAL
Trigger: AAGGGCCCTGTATATGCACCATCCCCAAATTCTGAC...GTATATGCACCATCCCCAAATTCTGACGATTTCAACCGTGAATCTCCTAGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184378.8
3UTR-3UTR TCA 90 bp TTAAGGAGTTACTTAGCCAAGACCATCACGCTTAGCATGTTTTTCTCTCCCAGGATCACTTCAAGGACATaGACAAAGCATACAGGACTG +
Preference number: 2 (lower is better)
Translates to: LRSYLAKTITLSMFFSPRITSRT*TKHTGL
Trigger: CAGTCCTGTATGCTTTGTTCATGTCCTTGAAGTGAT...CCTGGGAGAGAAAAACATGCTAAGCGTGATGGTCTTGGCTAAGTAACTCCTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR TCA 90 bp TTAAGGAGTTACTTAGCCAAGACCATCACGCTTAGCATGTTTTTCTCTCCCAGGGCCACAGATAGAGTCTaGTCTAACTGGAGAACATAT +
Preference number: 2 (lower is better)
Translates to: LRSYLAKTITLSMFFSPRATDRV*SNWRTY
Trigger: ATATGTTCTCCAGTTAGATCAGACTCTATCTGTGGC...CCTGGGAGAGAAAAACATGCTAAGCGTGATGGTCTTGGCTAAGTAACTCCTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR GCA 90 bp ATAGAGTCTGATCTAACTGGAGAACATATACAAATTAAGTCCACTAAGTTCGCCCTAAGGGCCAATGGTTaGCACTGCTCTGTGAACAGC +
Preference number: 2 (lower is better)
Translates to: IESDLTGEHIQIKSTKFALRANG*HCSVNS
Trigger: GCTGTTCACAGAGCAGTGGCAACCATTGGCCCTTAG...GGCGAACTTAGTGGACTTAATTTGTATATGTTCTCCAGTTAGATCAGACTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR GCA 90 bp CCACAGATAGAGTCTGATCTAACTGGAGAACATATACAAATTAAGTCCACTAAGCTAAGGGCCAATGGTTaGCACTGCTCTGTGAACAGC +
Preference number: 2 (lower is better)
Translates to: PQIESDLTGEHIQIKSTKLRANG*HCSVNS
Trigger: GCTGTTCACAGAGCAGTGGCAACCATTGGCCCTTAG...CTTAGTGGACTTAATTTGTATATGTTCTCCAGTTAGATCAGACTCTATCTGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR GCA 90 bp TTCCTTAGAAGCTACACAGAGGGAAGAGAATTGAAGGCAGGTAGGGCTTGTAGAATGGAGGATCTGAAGTaGTGTCTTCATGGTTTTTGT +
Preference number: 2 (lower is better)
Translates to: FLRSYTEGRELKAGRACRMEDLK*CLHGFC
Trigger: ACAAAAACCATGAAGACAGCACTTCAGATCCTCCAT...TCTACAAGCCCTACCTGCCTTCAATTCTCTTCCCTCTGTGTAGCTTCTAAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000183404.8
3UTR-3UTR CCA 90 bp GAATTTCAAAATCCATCAAAAGATGTGATTTGTCAAGATCCTGAGAGGACTCAGCAAAGGAGCTCCAGGTaGTTCCTATCTCAGGCTACC +
Preference number: 2 (lower is better)
Translates to: EFQNPSKDVICQDPERTQQRSSR*FLSQAT
Trigger: GGTAGCCTGAGATAGGAACCACCTGGAGCTCCTTTG...CTGAGTCCTCTCAGGATCTTGACAAATCACATCTTTTGATGGATTTTGAAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183404.8
3UTR-3UTR TCA 90 bp CTACAATGCAAGTTCAGGGCAGTCAGGGAGACAGACAGAAGCTCTGTTTTGAAATCACAGGATTACATATaGGTTTCTGGTTTCAAGTGT +
Preference number: 2 (lower is better)
Translates to: LQCKFRAVRETDRSSVLKSQDYI*VSGFKC
Trigger: ACACTTGAAACCAGAAACTCATATGTAATCCTGTGA...TTTCAAAACAGAGCTTCTGTCTGTCTCCCTGACTGCCCTGAACTTGCATTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183404.8
3UTR-3UTR TCA 90 bp AGTTACAGAACGACTTGGGATTTTTCTTCTGTGCAGACTGCCACTGCTATTGGCTCACAGGATTACATATaGGTTTCTGGTTTCAAGTGT +
Preference number: 2 (lower is better)
Translates to: SYRTTWDFSSVQTATAIGSQDYI*VSGFKC
Trigger: ACACTTGAAACCAGAAACTCATATGTAATCCTGTGA...GCCAATAGCAGTGGCAGTCTGCACAGAAGAAAAATCCCAAGTCGTTCTGTAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR GCA 90 bp CCACAGATAGAGTCTGATCTAACTGGAGAACATATACAAATTAAGTCCACTAAGCTGCTGAGCTTCCTATaGTCACGTCTGATGAAGTGC +
Preference number: 2 (lower is better)
Translates to: PQIESDLTGEHIQIKSTKLLSFL*SRLMKC
Trigger: GCACTTCATCAGACGTGAGCATAGGAAGCTCAGCAG...CTTAGTGGACTTAATTTGTATATGTTCTCCAGTTAGATCAGACTCTATCTGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR GCA 90 bp TACTCCATAGGAACTACATGGTATGCTAGAACCTACTATGCTCTTAAAATGCTACTGCTGAGCTTCCTATaGTCACGTCTGATGAAGTGC +
Preference number: 2 (lower is better)
Translates to: YSIGTTWYARTYYALKMLLLSFL*SRLMKC
Trigger: GCACTTCATCAGACGTGAGCATAGGAAGCTCAGCAG...TAGCATTTTAAGAGCATAGTAGGTTCTAGCATACCATGTAGTTCCTATGGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
3UTR-3UTR GCA 90 bp TTCCTTAGAAGCTACACAGAGGGAAGAGAATTGAAGGCAGGTAGGGCTTGTAGAGTTTGTATACATGCATaGATGGATGTGGTGTTAACA +
Preference number: 2 (lower is better)
Translates to: FLRSYTEGRELKAGRACRVCIHA*MDVVLT
Trigger: TGTTAACACCACATCCATGCATGCATGTATACAAAC...TCTACAAGCCCTACCTGCCTTCAATTCTCTTCCCTCTGTGTAGCTTCTAAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183404.8
3UTR-3UTR CCA 90 bp TTTTTCCTATTTCATGGAAATCACTATTCATATGGCGAAGGTCGGAGAGGGCAACTGCAAGGAGGGTTCTaGACTGTGACCATAAACTAT +
Preference number: 2 (lower is better)
Translates to: FFLFHGNHYSYGEGRRGQLQGGF*TVTINY
Trigger: ATAGTTTATGGTCACAGTCCAGAACCCTCCTTGCAG...TTGCCCTCTCCGACCTTCGCCATATGAATAGTGATTTCCATGAAATAGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR CCA 90 bp ATAGAGTCTGATCTAACTGGAGAACATATACAAATTAAGTCCACTAAGTTCGCCCCCAGGGTGCTGTGGTaGAAGACAGATTTCATGGAA +
Preference number: 2 (lower is better)
Translates to: IESDLTGEHIQIKSTKFAPRVLW*KTDFME
Trigger: TTCCATGAAATCTGTCTTCCACCACAGCACCCTGGG...GGCGAACTTAGTGGACTTAATTTGTATATGTTCTCCAGTTAGATCAGACTCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR CCA 90 bp TACTCCATAGGAACTACATGGTATGCTAGAACCTACTATGCTCTTAAAATGCTATCTCCCAGGGTGCTGTaGTGGAAGACAGATTTCATG +
Preference number: 2 (lower is better)
Translates to: YSIGTTWYARTYYALKMLSPRVL*WKTDFM
Trigger: CATGAAATCTGTCTTCCACCACAGCACCCTGGGAGA...TAGCATTTTAAGAGCATAGTAGGTTCTAGCATACCATGTAGTTCCTATGGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
3UTR-3UTR CCA 90 bp TTTTTCCTATTTCATGGAAATCACTATTCATATGGCGAAGGTCGGAGAGGGCAAAAAAAGGCCAGGCAGTaGCTTATGTTCACTCACACA +
Preference number: 2 (lower is better)
Translates to: FFLFHGNHYSYGEGRRGQKKARQ*LMFTHT
Trigger: TGTGTGAGTGAACATAAGCCACTGCCTGGCCTTTTT...TTGCCCTCTCCGACCTTCGCCATATGAATAGTGATTTCCATGAAATAGGAAAAA
42% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR TCA 90 bp GTCCCGGAGACTCACCAGGAAAAGTCATCTTTGTATTGTACTGAATGCATTCTGTCACAGGATTACATATaGGTTTCTGGTTTCAAGTGT +
Preference number: 2 (lower is better)
Translates to: VPETHQEKSSLYCTECILSQDYI*VSGFKC
Trigger: ACACTTGAAACCAGAAACTCATATGTAATCCTGTGA...CAGAATGCATTCAGTACAATACAAAGATGACTTTTCCTGGTGAGTCTCCGGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR TCA 90 bp TACTTATCAGCTAACACTTTACAAGTACTATATTGTGTAGTACTTACTGCTCGGAATGCTGGCATCAGCTaGGTGTACATCAGCTTCCCA +
Preference number: 2 (lower is better)
Translates to: YLSANTLQVLYCVVLTARNAGIS*VYISFP
Trigger: TGGGAAGCTGATGTACACTCAGCTGATGCCAGCATT...CCGAGCAGTAAGTACTACACAATATAGTACTTGTAAAGTGTTAGCTGATAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR TCA 90 bp TTTTTCCTATTTCATGGAAATCACTATTCATATGGCGAAGGTCGGAGAGGGCAAGCCACAGATAGAGTCTaGTCTAACTGGAGAACATAT +
Preference number: 2 (lower is better)
Translates to: FFLFHGNHYSYGEGRRGQATDRV*SNWRTY
Trigger: ATATGTTCTCCAGTTAGATCAGACTCTATCTGTGGC...TTGCCCTCTCCGACCTTCGCCATATGAATAGTGATTTCCATGAAATAGGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR GCA 90 bp TTTTTCCTATTTCATGGAAATCACTATTCATATGGCGAAGGTCGGAGAGGGCAAGTCACAGATGGTGTCTaGTTATCACTTCAAGGACAT +
Preference number: 2 (lower is better)
Translates to: FFLFHGNHYSYGEGRRGQVTDGV*LSLQGH
Trigger: ATGTCCTTGAAGTGATAAGCAGACACCATCTGTGAC...TTGCCCTCTCCGACCTTCGCCATATGAATAGTGATTTCCATGAAATAGGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR CCA 90 bp GTCCCGGAGACTCACCAGGAAAAGTCATCTTTGTATTGTACTGAATGCATTCTGGCAATAAACCAACAATaGAAACTGGAGAACAAGATG +
Preference number: 2 (lower is better)
Translates to: VPETHQEKSSLYCTECILAINQQ*KLENKM
Trigger: CATCTTGTTCTCCAGTTTCCATTGTTGGTTTATTGC...CAGAATGCATTCAGTACAATACAAAGATGACTTTTCCTGGTGAGTCTCCGGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
3UTR-3UTR TCA 90 bp CTTGTAAGTTACACTTCTTGCTATTATAGCTTTACTATGAAACCTAGAAGCCTGCGTCTGATGAAGTGCTaGCCAGTTGCTTTGATCACA +
Preference number: 2 (lower is better)
Translates to: LVSYTSCYYSFTMKPRSLRLMKC*PVALIT
Trigger: TGTGATCAAAGCAACTGGTCAGCACTTCATCAGACG...CAGGCTTCTAGGTTTCATAGTAAAGCTATAATAGCAAGAAGTGTAACTTACAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR GCA 90 bp GTCCCGGAGACTCACCAGGAAAAGTCATCTTTGTATTGTACTGAATGCATTCTGTTGTGTAGTACTTACTaGTCGGAAAACAAAGCAATT +
Preference number: 2 (lower is better)
Translates to: VPETHQEKSSLYCTECILLCSTY*SENKAI
Trigger: AATTGCTTTGTTTTCCGAGCAGTAAGTACTACACAA...CAGAATGCATTCAGTACAATACAAAGATGACTTTTCCTGGTGAGTCTCCGGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR GCA 90 bp TACTTATCAGCTAACACTTTACAAGTACTATATTGTGTAGTACTTACTGCTCGGTTTTCTCTCCCAGGGTaGTGTGGTGGAAGACAGATT +
Preference number: 2 (lower is better)
Translates to: YLSANTLQVLYCVVLTARFSLPG*CGGRQI
Trigger: AATCTGTCTTCCACCACAGCACCCTGGGAGAGAAAA...CCGAGCAGTAAGTACTACACAATATAGTACTTGTAAAGTGTTAGCTGATAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR CCA 90 bp ATAGAGTCTGATCTAACTGGAGAACATATACAAATTAAGTCCACTAAGTTCGCCAACTTCCACGTTGAGTaGAGAGATGAGACAGTCTCT +
Preference number: 2 (lower is better)
Translates to: IESDLTGEHIQIKSTKFANFHVE*RDETVS
Trigger: AGAGACTGTCTCATCTCTCCACTCAACGTGGAAGTT...GGCGAACTTAGTGGACTTAATTTGTATATGTTCTCCAGTTAGATCAGACTCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR TCA 90 bp TTTTTCCTATTTCATGGAAATCACTATTCATATGGCGAAGGTCGGAGAGGGCAATCACAGGATTACATATaGGTTTCTGGTTTCAAGTGT +
Preference number: 2 (lower is better)
Translates to: FFLFHGNHYSYGEGRRGQSQDYI*VSGFKC
Trigger: ACACTTGAAACCAGAAACTCATATGTAATCCTGTGA...TTGCCCTCTCCGACCTTCGCCATATGAATAGTGATTTCCATGAAATAGGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR TCA 90 bp ATAGAGTCTGATCTAACTGGAGAACATATACAAATTAAGTCCACTAAGTTCGCCATCACTTCAAGGACATaGACAAAGCATACAGGACTG +
Preference number: 2 (lower is better)
Translates to: IESDLTGEHIQIKSTKFAITSRT*TKHTGL
Trigger: CAGTCCTGTATGCTTTGTTCATGTCCTTGAAGTGAT...GGCGAACTTAGTGGACTTAATTTGTATATGTTCTCCAGTTAGATCAGACTCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR GCA 90 bp TACTCCATAGGAACTACATGGTATGCTAGAACCTACTATGCTCTTAAAATGCTAGAAGTGCTGACCAGTTaGTTTGATCACAGGATTACA +
Preference number: 2 (lower is better)
Translates to: YSIGTTWYARTYYALKMLEVLTS*FDHRIT
Trigger: TGTAATCCTGTGATCAAAGCAACTGGTCAGCACTTC...TAGCATTTTAAGAGCATAGTAGGTTCTAGCATACCATGTAGTTCCTATGGAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
3UTR-3UTR CCA 90 bp TACTTATCAGCTAACACTTTACAAGTACTATATTGTGTAGTACTTACTGCTCGGAACTTCCACGTTGAGTaGAGAGATGAGACAGTCTCT +
Preference number: 2 (lower is better)
Translates to: YLSANTLQVLYCVVLTARNFHVE*RDETVS
Trigger: AGAGACTGTCTCATCTCTCCACTCAACGTGGAAGTT...CCGAGCAGTAAGTACTACACAATATAGTACTTGTAAAGTGTTAGCTGATAAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR CAA 90 bp CAATGCAAGTTCAGGGCAGTCAGGGAGACAGACAGAAGCTCTGTTTaGAAAAACTACAAACAAACAAACAAACAAATCTCCAATAAATCA +
Preference number: 2 (lower is better)
Translates to: QCKFRAVRETDRSSV*KNYKQTNKQISNKS
Trigger: TGATTTATTGGAGATTTGTTTGTTTGTTTGTTTGTAGTTTTTCAAAACAGAGCTTCTGTCTGTCTCCCTGACTGCCCTGAACTTGCATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000183404.8
3UTR-3UTR TCA 90 bp TACTTATCAGCTAACACTTTACAAGTACTATATTGTGTAGTACTTACTGCTCGGCATCAGCTTCCCACATaGACTTTTCCCTTTATATGT +
Preference number: 2 (lower is better)
Translates to: YLSANTLQVLYCVVLTARHQLPT*TFPFIC
Trigger: ACATATAAAGGGAAAAGTTCATGTGGGAAGCTGATG...CCGAGCAGTAAGTACTACACAATATAGTACTTGTAAAGTGTTAGCTGATAAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR GCA 72 bp AGGTCAGTGTCAGTAGAGAGGGCAAGAGTAGAGCTGTaGGGGGCCGGGGGTGTCATCTTAGCTTGCCCAGCC +
Preference number: 3 (lower is better)
Translates to: RSVSVERARVEL*GAGGVILACPA
Trigger: GGCTGGGCAAGCTAAGATGACACCCCCGGCCCCGCACAGCTCTACTCTTGCCCTCTCTACTGACACTGACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000183404.8
3UTR GCA 72 bp TGGGAGGAGTATGTGAGGCGGCAACATATGGTGAGCTaGTGGTACTACCACGGTGGAAGCTGGACATTGGCG +
Preference number: 3 (lower is better)
Translates to: WEEYVRRQHMVS*WYYHGGSWTLA
Trigger: CGCCAATGTCCAGCTTCCACCGTGGTAGTACCAGCAGCTCACCATATGTTGCCGCCTCACATACTCCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183647.8
ENSMUST00000184378.8
ENSMUST00000184416.8
ENSMUST00000184867.8
3UTR CCA 72 bp CTAAGACAGACTGACAGGTACAGCTCGGTGCTAATCTaGCTCTTCTTGGGGTGGGGGCAGGTGGTTTGCAGG +
Preference number: 3 (lower is better)
Translates to: LRQTDRYSSVLI*LFLGWGQVVCR
Trigger: CCTGCAAACCACCTGCCCCCACCCCAAGAAGAGCCAGATTAGCACCGAGCTGTACCTGTCAGTCTGTCTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR CCA 72 bp GGCTGCCATAACTACTGGACTGAGACATGTGGGATGTaGAGGTCCCCAGAATTCCACCAAAACCAGGCTGGC +
Preference number: 3 (lower is better)
Translates to: GCHNYWTETCGM*RSPEFHQNQAG
Trigger: GCCAGCCTGGTTTTGGTGGAATTCTGGGGACCTCCACATCCCACATGTCTCAGTCCAGTAGTTATGGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000183647.8
ENSMUST00000184378.8
ENSMUST00000184416.8
ENSMUST00000184867.8
3UTR CCA 72 bp GAGGAGTATGTGAGGCGGCAACATATGGTGAGCTGCTaGTACTACCACGGTGGAAGCTGGACATTGGCGGAA +
Preference number: 3 (lower is better)
Translates to: EEYVRRQHMVSC*YYHGGSWTLAE
Trigger: TTCCGCCAATGTCCAGCTTCCACCGTGGTAGTACCAGCAGCTCACCATATGTTGCCGCCTCACATACTCCTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183647.8
ENSMUST00000184378.8
ENSMUST00000184416.8
ENSMUST00000184867.8
3UTR GCA 72 bp GGTATGCCGGGAATGCTAAGGGCCAATGGTTGCCACTaGTCTGTGAACAGCTTTAACAATGCTGGCATCAGC +
Preference number: 3 (lower is better)
Translates to: GMPGMLRANGCH*SVNSFNNAGIS
Trigger: GCTGATGCCAGCATTGTTAAAGCTGTTCACAGAGCAGTGGCAACCATTGGCCCTTAGCATTCCCGGCATACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR CCA 72 bp GCGGCAACATATGGTGAGCTGCTGGTACTACCACGGTaGAAGCTGGACATTGGCGGAAGACTTGTGTTTATG +
Preference number: 3 (lower is better)
Translates to: AATYGELLVLPR*KLDIGGRLVFM
Trigger: CATAAACACAAGTCTTCCGCCAATGTCCAGCTTCCACCGTGGTAGTACCAGCAGCTCACCATATGTTGCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183647.8
ENSMUST00000184378.8
ENSMUST00000184416.8
ENSMUST00000184867.8
3UTR-3UTR CAA 90 bp GCCAACTCAAAGGACAGAAGTAAAGCTAGGGTAAGGAACCGTGACCATTGCTCTGTGGGGGCAGGTGGTTaGCAGGTGATTAAGTCACCC +
Preference number: 3 (lower is better)
Translates to: ANSKDRSKARVRNRDHCSVGAGG*QVIKSP
Trigger: GGGTGACTTAATCACCTGCAAACCACCTGCCCCCAC...AGAGCAATGGTCACGGTTCCTTACCCTAGCTTTACTTCTGTCCTTTGAGTTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR CAA 90 bp TGGGAGGAGTATGTGAGGCGGCAACATATGGTGAGCTGCTGGTACTACCACGGTACTGTGGGTCCCATCTaGCATAAAGAAAGTGCTAGC +
Preference number: 3 (lower is better)
Translates to: WEEYVRRQHMVSCWYYHGTVGPI*HKESAS
Trigger: GCTAGCACTTTCTTTATGCAAGATGGGACCCACAGT...ACCGTGGTAGTACCAGCAGCTCACCATATGTTGCCGCCTCACATACTCCTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183647.8
ENSMUST00000184378.8
ENSMUST00000184416.8
ENSMUST00000184867.8
3UTR TCA 72 bp TCTCCTGGGGCTGTAAGTCACTCCCCACAGTGTGGCTaGAGAGGAATCACCCAGGAACTGGTTGAAATACTA +
Preference number: 3 (lower is better)
Translates to: SPGAVSHSPQCG*RGITQELVEIL
Trigger: TAGTATTTCAACCAGTTCCTGGGTGATTCCTCTTCAGCCACACTGTGGGGAGTGACTTACAGCCCCAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183404.8
3UTR GCA 72 bp CTAACAGGTATGCCGGGAATGCTAAGGGCCAATGGTTaGCACTGCTCTGTGAACAGCTTTAACAATGCTGGC +
Preference number: 3 (lower is better)
Translates to: LTGMPGMLRANG*HCSVNSFNNAG
Trigger: GCCAGCATTGTTAAAGCTGTTCACAGAGCAGTGGCAACCATTGGCCCTTAGCATTCCCGGCATACCTGTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR CCA 72 bp GATGTGGAGGTCCCCAGAATTCCACCAAAACCAGGCTaGCTCATCCCATTCGATGAACTCCAAAGGTCAGAA +
Preference number: 3 (lower is better)
Translates to: DVEVPRIPPKPG*LIPFDELQRSE
Trigger: TTCTGACCTTTGGAGTTCATCGAATGGGATGAGCCAGCCTGGTTTTGGTGGAATTCTGGGGACCTCCACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000183647.8
ENSMUST00000184378.8
ENSMUST00000184416.8
ENSMUST00000184867.8
3UTR CCA 72 bp TCAAGCGGTCATGTGAATGAAGGCTGCCATAACTACTaGACTGAGACATGTGGGATGTGGAGGTCCCCAGAA +
Preference number: 3 (lower is better)
Translates to: SSGHVNEGCHNY*TETCGMWRSPE
Trigger: TTCTGGGGACCTCCACATCCCACATGTCTCAGTCCAGTAGTTATGGCAGCCTTCATTCACATGACCGCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000183647.8
ENSMUST00000184378.8
ENSMUST00000184416.8
ENSMUST00000184867.8
3UTR-3UTR CAA 90 bp CTGGTACTACCACGGTGGAAGCTGGACATTGGCGGAAGACTTGTGTTTATGTCTAAGGCAACTTCCACGTaGAGTGGAGAGATGAGACAG +
Preference number: 3 (lower is better)
Translates to: LVLPRWKLDIGGRLVFMSKATST*SGEMRQ
Trigger: CTGTCTCATCTCTCCACTCAACGTGGAAGTTGCCTT...AGACATAAACACAAGTCTTCCGCCAATGTCCAGCTTCCACCGTGGTAGTACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184867.8
3UTR-3UTR CAA 90 bp CAACATATGGTGAGCTGCTGGTACTACCACGGTGGAAGCTGGACATTGGCGGAATTGTGTTTATGTCTGTaGGTGACACTGAGTGTGGAG +
Preference number: 3 (lower is better)
Translates to: QHMVSCWYYHGGSWTLAELCLCL*VTLSVE
Trigger: CTCCACACTCAGTGTCACCAACAGACATAAACACAA...TTCCGCCAATGTCCAGCTTCCACCGTGGTAGTACCAGCAGCTCACCATATGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183647.8
ENSMUST00000184378.8
ENSMUST00000184416.8
ENSMUST00000184867.8
3UTR TCA 72 bp AATTCCACCAAAACCAGGCTGGCTCATCCCATTCGATaGACTCCAAAGGTCAGAAGAACTGTGGGTCCCATC +
Preference number: 3 (lower is better)
Translates to: NSTKTRLAHPIR*TPKVRRTVGPI
Trigger: GATGGGACCCACAGTTCTTCTGACCTTTGGAGTTCATCGAATGGGATGAGCCAGCCTGGTTTTGGTGGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000183647.8
ENSMUST00000184378.8
ENSMUST00000184416.8
ENSMUST00000184867.8
3UTR TCA 72 bp CATTCCCTCTGGTTCCTAGGATGCTATCTGATCCATTaGTGGGAGGAGTATGTGAGGCGGCAACATATGGTG +
Preference number: 3 (lower is better)
Translates to: HSLWFLGCYLIH*WEEYVRRQHMV
Trigger: CACCATATGTTGCCGCCTCACATACTCCTCCCATCAATGGATCAGATAGCATCCTAGGAACCAGAGGGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000184378.8
ENSMUST00000184416.8
ENSMUST00000184867.8
3UTR CCA 72 bp CATATGGTGAGCTGCTGGTACTACCACGGTGGAAGCTaGACATTGGCGGAAGACTTGTGTTTATGTCTGTTG +
Preference number: 3 (lower is better)
Translates to: HMVSCWYYHGGS*TLAEDLCLCLL
Trigger: CAACAGACATAAACACAAGTCTTCCGCCAATGTCCAGCTTCCACCGTGGTAGTACCAGCAGCTCACCATATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183647.8
ENSMUST00000184378.8
ENSMUST00000184416.8
ENSMUST00000184867.8
3UTR CCA 72 bp TTATGGGATGGTCCCAGCAAACTGTGTATGTCACTGTaGCTAGTAGGCAGACTGGTAGAAGGTCCAACTGCA +
Preference number: 3 (lower is better)
Translates to: LWDGPSKLCMSL*LVGRLVEGPTA
Trigger: TGCAGTTGGACCTTCTACCAGTCTGCCTACTAGCCACAGTGACATACACAGTTTGCTGGGACCATCCCATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184867.8
3UTR-3UTR CAA 90 bp TCATATGGCGAAGGTCGGAGAGGGCAACAAAGGACTCCCTTCCTTTTTAAGACAAAGGCAACTTCCACGTaGAGTGGAGAGATGAGACAG +
Preference number: 3 (lower is better)
Translates to: SYGEGRRGQQRTPFLFKTKATST*SGEMRQ
Trigger: CTGTCTCATCTCTCCACTCAACGTGGAAGTTGCCTT...TGTCTTAAAAAGGAAGGGAGTCCTTTGTTGCCCTCTCCGACCTTCGCCATATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR CAA 90 bp TTCAAGGACATGAACAAAGCATACAGGACTGCAAGGAGGGTTCTGGACTGTGACAAGGCAACTTCCACGTaGAGTGGAGAGATGAGACAG +
Preference number: 3 (lower is better)
Translates to: FKDMNKAYRTARRVLDCDKATST*SGEMRQ
Trigger: CTGTCTCATCTCTCCACTCAACGTGGAAGTTGCCTT...GTCACAGTCCAGAACCCTCCTTGCAGTCCTGTATGCTTTGTTCATGTCCTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR-3UTR CAA 90 bp TTGATGGGAGGAGTATGTGAGGCGGCAACATATGGTGAGCTGCTGGTACTACCACTAGGAGATTCACGGTaGAAATCGTCAGAATTTGGG +
Preference number: 3 (lower is better)
Translates to: LMGGVCEAATYGELLVLPLGDSR*KSSEFG
Trigger: CCCAAATTCTGACGATTTCAACCGTGAATCTCCTAG...TGGTAGTACCAGCAGCTCACCATATGTTGCCGCCTCACATACTCCTCCCATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000183647.8
ENSMUST00000184378.8
ENSMUST00000184416.8
3UTR TCA 72 bp CTCGTCTTCATTGGTACTGCTTGTTCTGCCCCTAGATaGGACCTTGATGTCTTTCTGGGAGGACTCATCATC +
Preference number: 3 (lower is better)
Translates to: LVFIGTACSAPR*DLDVFLGGLII
Trigger: GATGATGAGTCCTCCCAGAAAGACATCAAGGTCTCATCTAGGGGCAGAACAAGCAGTACCAATGAAGACGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184867.8
3UTR CCA 72 bp GTAACTAGGAGATTCACGGTTGAAATCGTCAGAATTTaGGGATGGTGCATATACAGGGCCCTTCCCCAGAAC +
Preference number: 3 (lower is better)
Translates to: VTRRFTVEIVRI*GWCIYRALPQN
Trigger: GTTCTGGGGAAGGGCCCTGTATATGCACCATCCCCAAATTCTGACGATTTCAACCGTGAATCTCCTAGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184378.8
3UTR CCA 72 bp CAGGCAACACACATCATATCAGACATTCTGAAAACGTaGGACAGAGAGGTTTCTCCCACAGCAAGCCTAGGT +
Preference number: 3 (lower is better)
Translates to: QATHIISDILKT*DREVSPTASLG
Trigger: ACCTAGGCTTGCTGTGGGAGAAACCTCTCTGTCCCACGTTTTCAGAATGTCTGATATGATGTGTGTTGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184029.2
3UTR-3UTR CAA 90 bp CCCATCTTGCATAAAGAAAGTGCTAGCGAACATACTGGTTGGTGGCTTGGGAGAGTCTTCTTCTCGAACTaGTGGCAGAGAATGAGTAGT +
Preference number: 3 (lower is better)
Translates to: PILHKESASEHTGWWLGRVFFSN*WQRMSS
Trigger: ACTACTCATTCTCTGCCACAAGTTCGAGAAGAAGAC...TCTCCCAAGCCACCAACCAGTATGTTCGCTAGCACTTTCTTTATGCAAGATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000183647.8
ENSMUST00000184107.8
ENSMUST00000184416.8
3UTR TCA 72 bp GATGAGACAGTCTCTGATTGTGCAGAAGCGACACACTaGTTACAGCAGAGTGATATGCTGCAAACACCTCAC +
Preference number: 3 (lower is better)
Translates to: DETVSDCAEATH*LQQSDMLQTPH
Trigger: GTGAGGTGTTTGCAGCATATCACTCTGCTGTAATCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR TCA 72 bp ACAGAGGGTGCCTTAATGCATAATGCTAAGACAGACTaGCAGGTACAGCTCGGTGCTAATCTGGCTCTTCTT +
Preference number: 3 (lower is better)
Translates to: TEGALMHNAKTD*QVQLGANLALL
Trigger: AAGAAGAGCCAGATTAGCACCGAGCTGTACCTGTCAGTCTGTCTTAGCATTATGCATTAAGGCACCCTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR TCA 72 bp GTGTTTGAGGCAGCAACAGTACTAGACAGGACCGAATaGTTGCCATTGAGACTGACTGAATCTTCCCGATGT +
Preference number: 3 (lower is better)
Translates to: VFEAATVLDRTE*LPLRLTESSRC
Trigger: ACATCGGGAAGATTCAGTCAGTCTCAATGGCAATCATTCGGTCCTGTCTAGTACTGTTGCTGCCTCAAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184867.8
3UTR CCA 72 bp CTACAGAATCATGGAGCGGTCTTCTTCTCGAACTTGTaGCAGAGAATGAGTAGTATGGTGTTCCAGGCTTTC +
Preference number: 3 (lower is better)
Translates to: LQNHGAVFFSNL*QRMSSMVFQAF
Trigger: GAAAGCCTGGAACACCATACTACTCATTCTCTGCCACAAGTTCGAGAAGAAGACCGCTCCATGATTCTGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183594.2
ENSMUST00000183647.8
ENSMUST00000184107.8
ENSMUST00000184416.8
3UTR-3UTR CAA 90 bp TACTCCATAGGAACTACATGGTATGCTAGAACCTACTATGCTCTTAAAATGCTACTAATCTGGCTCTTCTaGGGGTGGGGGCAGGTGGTT +
Preference number: 3 (lower is better)
Translates to: YSIGTTWYARTYYALKMLLIWLF*GWGQVV
Trigger: AACCACCTGCCCCCACCCCAAGAAGAGCCAGATTAG...TAGCATTTTAAGAGCATAGTAGGTTCTAGCATACCATGTAGTTCCTATGGAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
3UTR TCA 72 bp TGCTGGCATCAGCTGAGTGTACATCAGCTTCCCACATaGACTTTTCCCTTTATATGTAGACCTCACAGTTCC +
Preference number: 3 (lower is better)
Translates to: CWHQLSVHQLPT*TFPFICRPHSS
Trigger: GGAACTGTGAGGTCTACATATAAAGGGAAAAGTTCATGTGGGAAGCTGATGTACACTCAGCTGATGCCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR TCA 72 bp TGCTCTGTGAACAGCTTTAACAATGCTGGCATCAGCTaGGTGTACATCAGCTTCCCACATGAACTTTTCCCT +
Preference number: 3 (lower is better)
Translates to: CSVNSFNNAGIS*VYISFPHELFP
Trigger: AGGGAAAAGTTCATGTGGGAAGCTGATGTACACTCAGCTGATGCCAGCATTGTTAAAGCTGTTCACAGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR TCA 72 bp TCAAAATCCATCAAAAGATGTGATTTGTCAAGATCCTaGGAGGACTCAGCCTCCTCGTGCAAAGGAGCTCCA +
Preference number: 3 (lower is better)
Translates to: SKSIKRCDLSRS*EDSASSCKGAP
Trigger: TGGAGCTCCTTTGCACGAGGAGGCTGAGTCCTCTCAGGATCTTGACAAATCACATCTTTTGATGGATTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183404.8
3UTR TCA 72 bp TGGGCTCCTTCTTACAAACCTGTTAATGAGGCAAGGTaGCTAGCTCTCTGGATCCCACCTTACTTCAAACAT +
Preference number: 3 (lower is better)
Translates to: WAPSYKPVNEAR*LALWIPPYFKH
Trigger: ATGTTTGAAGTAAGGTGGGATCCAGAGAGCTAGTCACCTTGCCTCATTAACAGGTTTGTAAGAAGGAGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183404.8
3UTR TCA 72 bp ACCCATAACAGGCAACACACATCATATCAGACATTCTaGAAACGTGGGACAGAGAGGTTTCTCCCACAGCAA +
Preference number: 3 (lower is better)
Translates to: THNRQHTSYQTF*KRGTERFLPQQ
Trigger: TTGCTGTGGGAGAAACCTCTCTGTCCCACGTTTTCAGAATGTCTGATATGATGTGTGTTGCCTGTTATGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184029.2
3UTR CCA 72 bp TTCTTCGCTTGTAAAGGATCTAGGGCTACAGAATCATaGAGCGGTCTTCTTCTCGAACTTGTGGCAGAGAAT +
Preference number: 3 (lower is better)
Translates to: FFACKGSRATES*SGLLLELVAEN
Trigger: ATTCTCTGCCACAAGTTCGAGAAGAAGACCGCTCCATGATTCTGTAGCCCTAGATCCTTTACAAGCGAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183594.2
ENSMUST00000183647.8
ENSMUST00000184107.8
ENSMUST00000184416.8
3UTR TCA 72 bp CATTATATAGTGAAGCCTCAGATGAGATGTCAGCGGTaGCTTCACACCCAAAGCACAGTCAAGAAACCCTTT +
Preference number: 3 (lower is better)
Translates to: HYIVKPQMRCQR*LHTQSTVKKPF
Trigger: AAAGGGTTTCTTGACTGTGCTTTGGGTGTGAAGTCACCGCTGACATCTCATCTGAGGCTTCACTATATAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184029.2
3UTR-3UTR CAA 90 bp TCATATGGCGAAGGTCGGAGAGGGCAACAAAGGACTCCCTTCCTTTTTAAGACAGTAGTTACAATGCATTaGTCAATTCAGTTTAGGCAC +
Preference number: 3 (lower is better)
Translates to: SYGEGRRGQQRTPFLFKTVVTMH*SIQFRH
Trigger: GTGCCTAAACTGAATTGACAAATGCATTGTAACTAC...TGTCTTAAAAAGGAAGGGAGTCCTTTGTTGCCCTCTCCGACCTTCGCCATATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR TCA 72 bp CATATACAAATTAAGTCCACTAAGTTCGCCAAAGACTaGCGTGTTCACCAGAGTCCTGATGGAGGATCTGAA +
Preference number: 3 (lower is better)
Translates to: HIQIKSTKFAKD*RVHQSPDGGSE
Trigger: TTCAGATCCTCCATCAGGACTCTGGTGAACACGTCAGTCTTTGGCGAACTTAGTGGACTTAATTTGTATATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR CCA 72 bp CAAAATTCTCCGGTGTCTCTAAGTTACAGAACGACTTaGGATTTTTCTTCTGTGCAGACTGCCACTGCTATT +
Preference number: 3 (lower is better)
Translates to: QNSPVSLSYRTT*DFSSVQTATAI
Trigger: AATAGCAGTGGCAGTCTGCACAGAAGAAAAATCCCAAGTCGTTCTGTAACTTAGAGACACCGGAGAATTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR CCA 72 bp CAAGAATGGAAACTGGAAAGAAGTGCTAGCTTTTGCTaGAGGACCATAGAAGAATGCAGATTCCCACAAAGA +
Preference number: 3 (lower is better)
Translates to: QEWKLERSASFC*RTIEECRFPQR
Trigger: TCTTTGTGGGAATCTGCATTCTTCTATGGTCCTCCAGCAAAAGCTAGCACTTCTTTCCAGTTTCCATTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183404.8
3UTR TCA 72 bp AGAGAGGTTTCTCCCACAGCAAGCCTAGGTAAAAAGTaGCTACATTATATAGTGAAGCCTCAGATGAGATGT +
Preference number: 3 (lower is better)
Translates to: REVSPTASLGKK*LHYIVKPQMRC
Trigger: ACATCTCATCTGAGGCTTCACTATATAATGTAGTCACTTTTTACCTAGGCTTGCTGTGGGAGAAACCTCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184029.2
3UTR GCA 72 bp AATCAAGAATGGAAACTGGAAAGAAGTGCTAGCTTTTaGTGGAGGACCATAGAAGAATGCAGATTCCCACAA +
Preference number: 3 (lower is better)
Translates to: NQEWKLERSASF*WRTIEECRFPQ
Trigger: TTGTGGGAATCTGCATTCTTCTATGGTCCTCCAGCAAAAGCTAGCACTTCTTTCCAGTTTCCATTCTTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183404.8
3UTR-3UTR CAA 90 bp TACTCCATAGGAACTACATGGTATGCTAGAACCTACTATGCTCTTAAAATGCTAACTGTGGGTCCCATCTaGCATAAAGAAAGTGCTAGC +
Preference number: 3 (lower is better)
Translates to: YSIGTTWYARTYYALKMLTVGPI*HKESAS
Trigger: GCTAGCACTTTCTTTATGCAAGATGGGACCCACAGT...TAGCATTTTAAGAGCATAGTAGGTTCTAGCATACCATGTAGTTCCTATGGAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184867.8
3UTR TCA 72 bp GAAATTTTCTGGTGTTTTATGGTTCAGTTCTGTGTTTaGGGCAGCAACAGTACTAGACAGGACCGAATGATT +
Preference number: 3 (lower is better)
Translates to: EIFWCFMVQFCV*GSNSTRQDRMI
Trigger: AATCATTCGGTCCTGTCTAGTACTGTTGCTGCCTCAAACACAGAACTGAACCATAAAACACCAGAAAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184867.8
3UTR TCA 72 bp GGAGACTCACCAGGAAAAGTCATCTTTGTATTGTACTaGATGCATTCTGTGCTTACTTATCAGCTAACACTT +
Preference number: 3 (lower is better)
Translates to: GDSPGKVIFVLY*MHSVLTYQLTL
Trigger: AAGTGTTAGCTGATAAGTAAGCACAGAATGCATTCAGTACAATACAAAGATGACTTTTCCTGGTGAGTCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR TCA 72 bp TCAGTCTTGATTTCTGTTGGAACAACACTTCCAGACTaGTTTTGTACACCACCTCTGAAATTTTCTGGTGTT +
Preference number: 3 (lower is better)
Translates to: SVLISVGTTLPD*FCTPPLKFSGV
Trigger: AACACCAGAAAATTTCAGAGGTGGTGTACAAAATCAGTCTGGAAGTGTTGTTCCAACAGAAATCAAGACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184867.8
3UTR CCA 72 bp AACAATTCGCTCTCACAATACTCCATAGGAACTACATaGTATGCTAGAACCTACTATGCTCTTAAAATGCTA +
Preference number: 3 (lower is better)
Translates to: NNSLSQYSIGTT*YARTYYALKML
Trigger: TAGCATTTTAAGAGCATAGTAGGTTCTAGCATACCATGTAGTTCCTATGGAGTATTGTGAGAGCGAATTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
3UTR-3UTR CAA 90 bp TACTTATCAGCTAACACTTTACAAGTACTATATTGTGTAGTACTTACTGCTCGGGTAGTTACAATGCATTaGTCAATTCAGTTTAGGCAC +
Preference number: 3 (lower is better)
Translates to: YLSANTLQVLYCVVLTARVVTMH*SIQFRH
Trigger: GTGCCTAAACTGAATTGACAAATGCATTGTAACTAC...CCGAGCAGTAAGTACTACACAATATAGTACTTGTAAAGTGTTAGCTGATAAGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp GAGAGGGCAAGAGTAGAGCTGTGCGGGGCCGGGGGTGTCATCTTAGCTTGCCCACTGGTACTACCACGGTaGAAGCTGGACATTGGCGGA +
Preference number: 4 (lower is better)
Translates to: ERARVELCGAGGVILACPLVLPR*KLDIGG
Trigger: TCCGCCAATGTCCAGCTTCCACCGTGGTAGTACCAG...TGGGCAAGCTAAGATGACACCCCCGGCCCCGCACAGCTCTACTCTTGCCCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183404.8
3UTR CAA 72 bp GACTCACTAAGCCCAGGATGGGCTCCTGGCAACGTGTaGGGCGGCTCTGCTGACGCAGCAGAGACTTTTTCT +
Preference number: 4 (lower is better)
Translates to: DSLSPGWAPGNV*GGSADAAETFS
Trigger: AGAAAAAGTCTCTGCTGCGTCAGCAGAGCCGCCCAACACGTTGCCAGGAGCCCATCCTGGGCTTAGTGAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184867.8
CDS-3UTR TCA 90 bp GAGAGGGCAAGAGTAGAGCTGTGCGGGGCCGGGGGTGTCATCTTAGCTTGCCCATGCTATCTGATCCATTaGTGGGAGGAGTATGTGAGG +
Preference number: 4 (lower is better)
Translates to: ERARVELCGAGGVILACPCYLIH*WEEYVR
Trigger: CCTCACATACTCCTCCCATCAATGGATCAGATAGCA...TGGGCAAGCTAAGATGACACCCCCGGCCCCGCACAGCTCTACTCTTGCCCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183404.8
CDS-3UTR TCA 90 bp ACTGACAGGTACAGCTCGGTGCTAATCTGGCTCTTCTTGGGGTGGGGGCAGGTGACTGACTGGTACCTGTaGGAGGTGAAGGAGATCCCA +
Preference number: 4 (lower is better)
Translates to: TDRYSSVLIWLFLGWGQVTDWYL*EVKEIP
Trigger: TGGGATCTCCTTCACCTCTCACAGGTACCAGTCAGT...CACCTGCCCCCACCCCAAGAAGAGCCAGATTAGCACCGAGCTGTACCTGTCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR GCA 90 bp GAAGAAGACAGCTGTGCCGGGCTCCCAAGTCCTAGATCTTGTCTCAGGAGACTATCCCTATCGCGGCCATaGGCTGCTGCTGGGGATTCA +
Preference number: 4 (lower is better)
Translates to: EEDSCAGLPSPRSCLRRLSLSRP*AAAGDS
Trigger: TGAATCCCCAGCAGCAGCGCATGGCCGCGATAGGGA...TAGTCTCCTGAGACAAGATCTAGGACTTGGGAGCCCGGCACAGCTGTCTTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000183594.2
ENSMUST00000184107.8
CDS-3UTR GCA 90 bp ACACTAACAGGTATGCCGGGAATGCTAAGGGCCAATGGTTGCCACTGCTCTGTGTCCCTATCGCGGCCATaGGCTGCTGCTGGGGATTCA +
Preference number: 4 (lower is better)
Translates to: TLTGMPGMLRANGCHCSVSLSRP*AAAGDS
Trigger: TGAATCCCCAGCAGCAGCGCATGGCCGCGATAGGGA...CACAGAGCAGTGGCAACCATTGGCCCTTAGCATTCCCGGCATACCTGTTAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
CDS-3UTR GCA 90 bp CCCCACGGACCAGCCAACTCAAAGGACAGAAGTAAAGCTAGGGTAAGGAACCGTGGAGATGAAGGAGCTTaGCCTCCAGCTCTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: PHGPANSKDRSKARVRNRGDEGA*PPALGH
Trigger: GTGGCCCAGAGCTGGAGGGCAAGCTCCTTCATCTCC...ACGGTTCCTTACCCTAGCTTTACTTCTGTCCTTTGAGTTGGCTGGTCCGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp CAGTTTAGGCACAAGGCAACTTCCACGTTGAGTGGAGAGATGAGACAGTCTCTGCCCAGGATGGGCTCCTaGCAACGTGTTGGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: QFRHKATSTLSGEMRQSLPRMGS*QRVGRL
Trigger: GAGCCGCCCAACACGTTGCCAGGAGCCCATCCTGGG...CAGAGACTGTCTCATCTCTCCACTCAACGTGGAAGTTGCCTTGTGCCTAAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp CACGGACCAGCCAACTCAAAGGACAGAAGTAAAGCTAGGGTAAGGAACCGTGACCCAGCTCTGGGCCACTaGCTGGTACCTGTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: HGPANSKDRSKARVRNRDPALGH*LVPVRG
Trigger: ACCTCTCACAGGTACCAGTCAGTGGCCCAGAGCTGG...GTCACGGTTCCTTACCCTAGCTTTACTTCTGTCCTTTGAGTTGGCTGGTCCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR GCA 90 bp GTCTGTGAGCTTCCAGCAGCATTCCCTCTGGTTCCTAGGATGCTATCTGATCCATCCCTATCGCGGCCATaGGCTGCTGCTGGGGATTCA +
Preference number: 4 (lower is better)
Translates to: VCELPAAFPLVPRMLSDPSLSRP*AAAGDS
Trigger: TGAATCCCCAGCAGCAGCGCATGGCCGCGATAGGGA...TGGATCAGATAGCATCCTAGGAACCAGAGGGAATGCTGCTGGAAGCTCACAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184867.8
CDS-3UTR CCA 90 bp ACTGACAGGTACAGCTCGGTGCTAATCTGGCTCTTCTTGGGGTGGGGGCAGGTGAGCGAACATACTGGTTaGTGGCTTGGGAGATGGGTA +
Preference number: 4 (lower is better)
Translates to: TDRYSSVLIWLFLGWGQVSEHTG*WLGRWV
Trigger: TACCCATCTCCCAAGCCACCAACCAGTATGTTCGCT...CACCTGCCCCCACCCCAAGAAGAGCCAGATTAGCACCGAGCTGTACCTGTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp ACGTTGAGTGGAGAGATGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGATCCCAGGATGGGCTCCTaGCAACGTGTTGGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: TLSGEMRQSLIVQKRHTDPRMGS*QRVGRL
Trigger: GAGCCGCCCAACACGTTGCCAGGAGCCCATCCTGGG...ATCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCATCTCTCCACTCAACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp ACACTAACAGGTATGCCGGGAATGCTAAGGGCCAATGGTTGCCACTGCTCTGTGGGTACCTGTGAGAGGTaGAGGAGATCCCACTGGTGT +
Preference number: 4 (lower is better)
Translates to: TLTGMPGMLRANGCHCSVGTCER*RRSHWC
Trigger: ACACCAGTGGGATCTCCTTCACCTCTCACAGGTACC...CACAGAGCAGTGGCAACCATTGGCCCTTAGCATTCCCGGCATACCTGTTAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp CAGTTTAGGCACAAGGCAACTTCCACGTTGAGTGGAGAGATGAGACAGTCTCTGCCAGCTCTGGGCCACTaGCTGGTACCTGTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: QFRHKATSTLSGEMRQSLPALGH*LVPVRG
Trigger: ACCTCTCACAGGTACCAGTCAGTGGCCCAGAGCTGG...CAGAGACTGTCTCATCTCTCCACTCAACGTGGAAGTTGCCTTGTGCCTAAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp ACTGACAGGTACAGCTCGGTGCTAATCTGGCTCTTCTTGGGGTGGGGGCAGGTGTCTTGCAAATGCTCGTaGAGTTGCTGCTCAACTCGA +
Preference number: 4 (lower is better)
Translates to: TDRYSSVLIWLFLGWGQVSCKCS*SCCSTR
Trigger: TCGAGTTGAGCAGCAACTTCACGAGCATTTGCAAGA...CACCTGCCCCCACCCCAAGAAGAGCCAGATTAGCACCGAGCTGTACCTGTCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000183404.8
ENSMUST00000183918.8
CDS-3UTR GCA 90 bp CAGTTTAGGCACAAGGCAACTTCCACGTTGAGTGGAGAGATGAGACAGTCTCTGGGAGATGAAGGAGCTTaGCCTCCAGCTCTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: QFRHKATSTLSGEMRQSLGDEGA*PPALGH
Trigger: GTGGCCCAGAGCTGGAGGGCAAGCTCCTTCATCTCC...CAGAGACTGTCTCATCTCTCCACTCAACGTGGAAGTTGCCTTGTGCCTAAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp CCCCACGGACCAGCCAACTCAAAGGACAGAAGTAAAGCTAGGGTAAGGAACCGTCTGGTACTACCACGGTaGAAGCTGGACATTGGCGGA +
Preference number: 4 (lower is better)
Translates to: PHGPANSKDRSKARVRNRLVLPR*KLDIGG
Trigger: TCCGCCAATGTCCAGCTTCCACCGTGGTAGTACCAG...ACGGTTCCTTACCCTAGCTTTACTTCTGTCCTTTGAGTTGGCTGGTCCGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp GTGTTCACCAGAGTCCTGATGGAGGATCTGAAGTGCTGTCTTCATGGTTTTTGTCCCAGGATGGGCTCCTaGCAACGTGTTGGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: VFTRVLMEDLKCCLHGFCPRMGS*QRVGRL
Trigger: GAGCCGCCCAACACGTTGCCAGGAGCCCATCCTGGG...ACAAAAACCATGAAGACAGCACTTCAGATCCTCCATCAGGACTCTGGTGAACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
3UTR CAA 72 bp ATCCCAGCACTCAGGAGGCAGAGGCAGGCAGATCTTTaGGTCTACAATGCAAGTTCAGGGCAGTCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: IPALRRQRQADL*VYNASSGQSGR
Trigger: TCTCCCTGACTGCCCTGAACTTGCATTGTAGACCAAAAGATCTGCCTGCCTCTGCCTCCTGAGTGCTGGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183404.8
CDS-3UTR TCA 90 bp AGAGGGCAACAAAGGACTCCCTTCCTTTTTAAGACACTAACAGGTATGCCGGGACCAGCTCTGGGCCACTaGCTGGTACCTGTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: RGQQRTPFLFKTLTGMPGPALGH*LVPVRG
Trigger: ACCTCTCACAGGTACCAGTCAGTGGCCCAGAGCTGG...TCCCGGCATACCTGTTAGTGTCTTAAAAAGGAAGGGAGTCCTTTGTTGCCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp TTCAAGGACATGAACAAAGCATACAGGACTGCAAGGAGGGTTCTGGACTGTGACCCAGCTCTGGGCCACTaGCTGGTACCTGTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: FKDMNKAYRTARRVLDCDPALGH*LVPVRG
Trigger: ACCTCTCACAGGTACCAGTCAGTGGCCCAGAGCTGG...GTCACAGTCCAGAACCCTCCTTGCAGTCCTGTATGCTTTGTTCATGTCCTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR GCA 90 bp AAATCACTATTCATATGGCGAAGGTCGGAGAGGGCAACAAAGGACTCCCTTCCTTCCCTATCGCGGCCATaGGCTGCTGCTGGGGATTCA +
Preference number: 4 (lower is better)
Translates to: KSLFIWRRSERATKDSLPSLSRP*AAAGDS
Trigger: TGAATCCCCAGCAGCAGCGCATGGCCGCGATAGGGA...AGGAAGGGAGTCCTTTGTTGCCCTCTCCGACCTTCGCCATATGAATAGTGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
CDS-3UTR GCA 90 bp AGGCCAGGAGGCACCTTTCTTACTTTCTTCGCTTGTAAAGGATCTAGGGCTACATCCCTATCGCGGCCATaGGCTGCTGCTGGGGATTCA +
Preference number: 4 (lower is better)
Translates to: RPGGTFLTFFACKGSRATSLSRP*AAAGDS
Trigger: TGAATCCCCAGCAGCAGCGCATGGCCGCGATAGGGA...TGTAGCCCTAGATCCTTTACAAGCGAAGAAAGTAAGAAAGGTGCCTCCTGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000183594.2
ENSMUST00000184107.8
CDS-3UTR GCA 90 bp ACGTTGAGTGGAGAGATGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGATGGAGATGAAGGAGCTTaGCCTCCAGCTCTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: TLSGEMRQSLIVQKRHTDGDEGA*PPALGH
Trigger: GTGGCCCAGAGCTGGAGGGCAAGCTCCTTCATCTCC...ATCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCATCTCTCCACTCAACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp GAGTATGTGAGGCGGCAACATATGGTGAGCTGCTGGTACTACCACGGTGGAAGCGTTCATGAAAGGTGTTaGGGACAAGCCTTCGTGGGT +
Preference number: 4 (lower is better)
Translates to: EYVRRQHMVSCWYYHGGSVHERC*GQAFVG
Trigger: ACCCACGAAGGCTTGTCCCCAACACCTTTCATGAAC...GCTTCCACCGTGGTAGTACCAGCAGCTCACCATATGTTGCCGCCTCACATACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000183647.8
ENSMUST00000184416.8
CDS-3UTR CCA 90 bp CCCCACGGACCAGCCAACTCAAAGGACAGAAGTAAAGCTAGGGTAAGGAACCGTGAGACATGTGGGATGTaGAGGTCCCCAGAATTCCAC +
Preference number: 4 (lower is better)
Translates to: PHGPANSKDRSKARVRNRETCGM*RSPEFH
Trigger: GTGGAATTCTGGGGACCTCCACATCCCACATGTCTC...ACGGTTCCTTACCCTAGCTTTACTTCTGTCCTTTGAGTTGGCTGGTCCGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp CAGAAGCGACACACTGATTACAGCAGAGTGATATGCTGCAAACACCTCACGGCCCTGGTACTACCACGGTaGAAGCTGGACATTGGCGGA +
Preference number: 4 (lower is better)
Translates to: QKRHTDYSRVICCKHLTALVLPR*KLDIGG
Trigger: TCCGCCAATGTCCAGCTTCCACCGTGGTAGTACCAG...GGCCGTGAGGTGTTTGCAGCATATCACTCTGCTGTAATCAGTGTGTCGCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp AGAGGGCAACAAAGGACTCCCTTCCTTTTTAAGACACTAACAGGTATGCCGGGACTTGCCCTCCAGCTCTaGGCCACTGACTGGTACCTG +
Preference number: 4 (lower is better)
Translates to: RGQQRTPFLFKTLTGMPGLALQL*ATDWYL
Trigger: CAGGTACCAGTCAGTGGCCCAGAGCTGGAGGGCAAG...TCCCGGCATACCTGTTAGTGTCTTAAAAAGGAAGGGAGTCCTTTGTTGCCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp AAGGACATGAACAAAGCATACAGGACTGCAAGGAGGGTTCTGGACTGTGACCATCTTGCCCTCCAGCTCTaGGCCACTGACTGGTACCTG +
Preference number: 4 (lower is better)
Translates to: KDMNKAYRTARRVLDCDHLALQL*ATDWYL
Trigger: CAGGTACCAGTCAGTGGCCCAGAGCTGGAGGGCAAG...ATGGTCACAGTCCAGAACCCTCCTTGCAGTCCTGTATGCTTTGTTCATGTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp TTCAAGGACATGAACAAAGCATACAGGACTGCAAGGAGGGTTCTGGACTGTGACCTTGCCCTCCAGCTCTaGGCCACTGACTGGTACCTG +
Preference number: 4 (lower is better)
Translates to: FKDMNKAYRTARRVLDCDLALQL*ATDWYL
Trigger: CAGGTACCAGTCAGTGGCCCAGAGCTGGAGGGCAAG...GTCACAGTCCAGAACCCTCCTTGCAGTCCTGTATGCTTTGTTCATGTCCTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp GCTTTAACAATGCTGGCATCAGCTGAGTGTACATCAGCTTCCCACATGAACTTTCCCAGGATGGGCTCCTaGCAACGTGTTGGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: ALTMLASAECTSASHMNFPRMGS*QRVGRL
Trigger: GAGCCGCCCAACACGTTGCCAGGAGCCCATCCTGGG...AAAGTTCATGTGGGAAGCTGATGTACACTCAGCTGATGCCAGCATTGTTAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR GCA 90 bp TCTTCTGTGCAGACTGCCACTGCTATTGGCTTTAAGGAGTTACTTAGCCAAGACGGAGATGAAGGAGCTTaGCCTCCAGCTCTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: SSVQTATAIGFKELLSQDGDEGA*PPALGH
Trigger: GTGGCCCAGAGCTGGAGGGCAAGCTCCTTCATCTCC...GTCTTGGCTAAGTAACTCCTTAAAGCCAATAGCAGTGGCAGTCTGCACAGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp ACACTAACAGGTATGCCGGGAATGCTAAGGGCCAATGGTTGCCACTGCTCTGTGAGCGAACATACTGGTTaGTGGCTTGGGAGATGGGTA +
Preference number: 4 (lower is better)
Translates to: TLTGMPGMLRANGCHCSVSEHTG*WLGRWV
Trigger: TACCCATCTCCCAAGCCACCAACCAGTATGTTCGCT...CACAGAGCAGTGGCAACCATTGGCCCTTAGCATTCCCGGCATACCTGTTAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp CCCCACGGACCAGCCAACTCAAAGGACAGAAGTAAAGCTAGGGTAAGGAACCGTAGCGAACATACTGGTTaGTGGCTTGGGAGATGGGTA +
Preference number: 4 (lower is better)
Translates to: PHGPANSKDRSKARVRNRSEHTG*WLGRWV
Trigger: TACCCATCTCCCAAGCCACCAACCAGTATGTTCGCT...ACGGTTCCTTACCCTAGCTTTACTTCTGTCCTTTGAGTTGGCTGGTCCGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp CCCCACGGACCAGCCAACTCAAAGGACAGAAGTAAAGCTAGGGTAAGGAACCGTGGCTGCCATAACTACTaGACTGAGACATGTGGGATG +
Preference number: 4 (lower is better)
Translates to: PHGPANSKDRSKARVRNRGCHNY*TETCGM
Trigger: CATCCCACATGTCTCAGTCCAGTAGTTATGGCAGCC...ACGGTTCCTTACCCTAGCTTTACTTCTGTCCTTTGAGTTGGCTGGTCCGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp ACACTAACAGGTATGCCGGGAATGCTAAGGGCCAATGGTTGCCACTGCTCTGTGCAGCAGCATTCCCTCTaGTTCCTAGGATGCTATCTG +
Preference number: 4 (lower is better)
Translates to: TLTGMPGMLRANGCHCSVQQHSL*FLGCYL
Trigger: CAGATAGCATCCTAGGAACCAGAGGGAATGCTGCTG...CACAGAGCAGTGGCAACCATTGGCCCTTAGCATTCCCGGCATACCTGTTAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp GTGTTCACCAGAGTCCTGATGGAGGATCTGAAGTGCTGTCTTCATGGTTTTTGTCTTGCCCTCCAGCTCTaGGCCACTGACTGGTACCTG +
Preference number: 4 (lower is better)
Translates to: VFTRVLMEDLKCCLHGFCLALQL*ATDWYL
Trigger: CAGGTACCAGTCAGTGGCCCAGAGCTGGAGGGCAAG...ACAAAAACCATGAAGACAGCACTTCAGATCCTCCATCAGGACTCTGGTGAACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp ACACTAACAGGTATGCCGGGAATGCTAAGGGCCAATGGTTGCCACTGCTCTGTGACTCAAGCGGTCATGTaGATGAAGGCTGCCATAACT +
Preference number: 4 (lower is better)
Translates to: TLTGMPGMLRANGCHCSVTQAVM*MKAAIT
Trigger: AGTTATGGCAGCCTTCATTCACATGACCGCTTGAGT...CACAGAGCAGTGGCAACCATTGGCCCTTAGCATTCCCGGCATACCTGTTAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp CCCTTCCTTTTTAAGACACTAACAGGTATGCCGGGAATGCTAAGGGCCAATGGTGGTACCTGTGAGAGGTaGAGGAGATCCCACTGGTGT +
Preference number: 4 (lower is better)
Translates to: PFLFKTLTGMPGMLRANGGTCER*RRSHWC
Trigger: ACACCAGTGGGATCTCCTTCACCTCTCACAGGTACC...ACCATTGGCCCTTAGCATTCCCGGCATACCTGTTAGTGTCTTAAAAAGGAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp CAGTTTAGGCACAAGGCAACTTCCACGTTGAGTGGAGAGATGAGACAGTCTCTGACTGACTGGTACCTGTaGGAGGTGAAGGAGATCCCA +
Preference number: 4 (lower is better)
Translates to: QFRHKATSTLSGEMRQSLTDWYL*EVKEIP
Trigger: TGGGATCTCCTTCACCTCTCACAGGTACCAGTCAGT...CAGAGACTGTCTCATCTCTCCACTCAACGTGGAAGTTGCCTTGTGCCTAAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR GCA 90 bp ACACTAACAGGTATGCCGGGAATGCTAAGGGCCAATGGTTGCCACTGCTCTGTGAGAGTCCAGAGTCTCTaGTGTACAGGGAAAATGAGC +
Preference number: 4 (lower is better)
Translates to: TLTGMPGMLRANGCHCSVRVQSL*CTGKMS
Trigger: GCTCATTTTCCCTGTACAGCAGAGACTCTGGACTCT...CACAGAGCAGTGGCAACCATTGGCCCTTAGCATTCCCGGCATACCTGTTAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR GCA 90 bp CACGGACCAGCCAACTCAAAGGACAGAAGTAAAGCTAGGGTAAGGAACCGTGACTCTCTTAAGGCAGGCTaGTTTGGGGTTGAGGTTCCT +
Preference number: 4 (lower is better)
Translates to: HGPANSKDRSKARVRNRDSLKAG*FGVEVP
Trigger: AGGAACCTCAACCCCAAAGCAGCCTGCCTTAAGAGA...GTCACGGTTCCTTACCCTAGCTTTACTTCTGTCCTTTGAGTTGGCTGGTCCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp CATCTGTCCTGCAGGGTCACCCGTGAAGCACAATTAGTGCAGACAGGAAAAGCAGTTCATGAAAGGTGTTaGGGACAAGCCTTCGTGGGT +
Preference number: 4 (lower is better)
Translates to: HLSCRVTREAQLVQTGKAVHERC*GQAFVG
Trigger: ACCCACGAAGGCTTGTCCCCAACACCTTTCATGAAC...TGCTTTTCCTGTCTGCACTAATTGTGCTTCACGGGTGACCCTGCAGGACAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183404.8
CDS-3UTR CCA 90 bp TCATATGGCGAAGGTCGGAGAGGGCAACAAAGGACTCCCTTCCTTTTTAAGACACTGGTACTACCACGGTaGAAGCTGGACATTGGCGGA +
Preference number: 4 (lower is better)
Translates to: SYGEGRRGQQRTPFLFKTLVLPR*KLDIGG
Trigger: TCCGCCAATGTCCAGCTTCCACCGTGGTAGTACCAG...TGTCTTAAAAAGGAAGGGAGTCCTTTGTTGCCCTCTCCGACCTTCGCCATATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp GAGAGGGCAAGAGTAGAGCTGTGCGGGGCCGGGGGTGTCATCTTAGCTTGCCCATTTTCTGGTGTTTTATaGTTCAGTTCTGTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: ERARVELCGAGGVILACPFSGVL*FSSVFE
Trigger: CTCAAACACAGAACTGAACCATAAAACACCAGAAAA...TGGGCAAGCTAAGATGACACCCCCGGCCCCGCACAGCTCTACTCTTGCCCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000183404.8
3UTR CAA 72 bp GTGAGCTGCTGGTACTACCACGGTGGAAGCTGGACATaGGCGGAAGACTTGTGTTTATGTCTGTTGGTGACA +
Preference number: 4 (lower is better)
Translates to: VSCWYYHGGSWT*AEDLCLCLLVT
Trigger: TGTCACCAACAGACATAAACACAAGTCTTCCGCCAATGTCCAGCTTCCACCGTGGTAGTACCAGCAGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183647.8
ENSMUST00000184378.8
ENSMUST00000184416.8
ENSMUST00000184867.8
CDS-3UTR TCA 90 bp ACGTTGAGTGGAGAGATGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGATACTAGACTGACAGCCTaGGAGTCCAGAGTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: TLSGEMRQSLIVQKRHTDTRLTA*ESRVSA
Trigger: AGCAGAGACTCTGGACTCTCAGGCTGTCAGTCTAGT...ATCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCATCTCTCCACTCAACGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp AAATCACTATTCATATGGCGAAGGTCGGAGAGGGCAACAAAGGACTCCCTTCCTACTAGACTGACAGCCTaGGAGTCCAGAGTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: KSLFIWRRSERATKDSLPTRLTA*ESRVSA
Trigger: AGCAGAGACTCTGGACTCTCAGGCTGTCAGTCTAGT...AGGAAGGGAGTCCTTTGTTGCCCTCTCCGACCTTCGCCATATGAATAGTGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp CCCTTCCTTTTTAAGACACTAACAGGTATGCCGGGAATGCTAAGGGCCAATGGTACTAGACTGACAGCCTaGGAGTCCAGAGTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: PFLFKTLTGMPGMLRANGTRLTA*ESRVSA
Trigger: AGCAGAGACTCTGGACTCTCAGGCTGTCAGTCTAGT...ACCATTGGCCCTTAGCATTCCCGGCATACCTGTTAGTGTCTTAAAAAGGAAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp TCTTCTGTGCAGACTGCCACTGCTATTGGCTTTAAGGAGTTACTTAGCCAAGACTGTTCCAGGCTTTCCTaGAGAAGACAGCTGTGCCGG +
Preference number: 4 (lower is better)
Translates to: SSVQTATAIGFKELLSQDCSRLS*RRQLCR
Trigger: CCGGCACAGCTGTCTTCTTCAGGAAAGCCTGGAACA...GTCTTGGCTAAGTAACTCCTTAAAGCCAATAGCAGTGGCAGTCTGCACAGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp CAGAAGCGACACACTGATTACAGCAGAGTGATATGCTGCAAACACCTCACGGCCGCTCATCCCATTCGATaGACTCCAAAGGTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: QKRHTDYSRVICCKHLTAAHPIR*TPKVRR
Trigger: TCTTCTGACCTTTGGAGTTCATCGAATGGGATGAGC...GGCCGTGAGGTGTTTGCAGCATATCACTCTGCTGTAATCAGTGTGTCGCTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp CACGGACCAGCCAACTCAAAGGACAGAAGTAAAGCTAGGGTAAGGAACCGTGACTGCTATCTGATCCATTaGTGGGAGGAGTATGTGAGG +
Preference number: 4 (lower is better)
Translates to: HGPANSKDRSKARVRNRDCYLIH*WEEYVR
Trigger: CCTCACATACTCCTCCCATCAATGGATCAGATAGCA...GTCACGGTTCCTTACCCTAGCTTTACTTCTGTCCTTTGAGTTGGCTGGTCCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp CAGAAGCGACACACTGATTACAGCAGAGTGATATGCTGCAAACACCTCACGGCCTGCTATCTGATCCATTaGTGGGAGGAGTATGTGAGG +
Preference number: 4 (lower is better)
Translates to: QKRHTDYSRVICCKHLTACYLIH*WEEYVR
Trigger: CCTCACATACTCCTCCCATCAATGGATCAGATAGCA...GGCCGTGAGGTGTTTGCAGCATATCACTCTGCTGTAATCAGTGTGTCGCTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp CCCTTCCTTTTTAAGACACTAACAGGTATGCCGGGAATGCTAAGGGCCAATGGTACTGACTGGTACCTGTaGGAGGTGAAGGAGATCCCA +
Preference number: 4 (lower is better)
Translates to: PFLFKTLTGMPGMLRANGTDWYL*EVKEIP
Trigger: TGGGATCTCCTTCACCTCTCACAGGTACCAGTCAGT...ACCATTGGCCCTTAGCATTCCCGGCATACCTGTTAGTGTCTTAAAAAGGAAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp AGAGGGCAACAAAGGACTCCCTTCCTTTTTAAGACACTAACAGGTATGCCGGGATTCATAGCTTGGAGATaGAGGAGCTTGCCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RGQQRTPFLFKTLTGMPGFIAWR*RSLPSS
Trigger: GCTGGAGGGCAAGCTCCTTCATCTCCAAGCTATGAA...TCCCGGCATACCTGTTAGTGTCTTAAAAAGGAAGGGAGTCCTTTGTTGCCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp CAGTTTAGGCACAAGGCAACTTCCACGTTGAGTGGAGAGATGAGACAGTCTCTGGCCATTGAGACTGACTaGATCTTCCCGATGTGTTCC +
Preference number: 4 (lower is better)
Translates to: QFRHKATSTLSGEMRQSLAIETD*IFPMCS
Trigger: GGAACACATCGGGAAGATTCAGTCAGTCTCAATGGC...CAGAGACTGTCTCATCTCTCCACTCAACGTGGAAGTTGCCTTGTGCCTAAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp ACACTAACAGGTATGCCGGGAATGCTAAGGGCCAATGGTTGCCACTGCTCTGTGGTTCAGTTCTGTGTTTaGGGCAGCAACAGTACTAGA +
Preference number: 4 (lower is better)
Translates to: TLTGMPGMLRANGCHCSVVQFCV*GSNSTR
Trigger: TCTAGTACTGTTGCTGCCTCAAACACAGAACTGAAC...CACAGAGCAGTGGCAACCATTGGCCCTTAGCATTCCCGGCATACCTGTTAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp CATCTGTCCTGCAGGGTCACCCGTGAAGCACAATTAGTGCAGACAGGAAAAGCATCTTGCAAATGCTCGTaGAGTTGCTGCTCAACTCGA +
Preference number: 4 (lower is better)
Translates to: HLSCRVTREAQLVQTGKASCKCS*SCCSTR
Trigger: TCGAGTTGAGCAGCAACTTCACGAGCATTTGCAAGA...TGCTTTTCCTGTCTGCACTAATTGTGCTTCACGGGTGACCCTGCAGGACAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183404.8
CDS-3UTR CCA 90 bp GGCCAGGAGGCACCTTTCTTACTTTCTTCGCTTGTAAAGGATCTAGGGCTACAGATCATAGGAGGGGCTTaGTTGACCACTTGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: GQEAPFLLSSLVKDLGLQIIGGA*LTTCSP
Trigger: TGGGGAACAAGTGGTCAACCAAGCCCCTCCTATGAT...CTGTAGCCCTAGATCCTTTACAAGCGAAGAAAGTAAGAAAGGTGCCTCCTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184107.8
CDS-3UTR CCA 90 bp CAGTTTAGGCACAAGGCAACTTCCACGTTGAGTGGAGAGATGAGACAGTCTCTGATCATAGGAGGGGCTTaGTTGACCACTTGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: QFRHKATSTLSGEMRQSLIIGGA*LTTCSP
Trigger: TGGGGAACAAGTGGTCAACCAAGCCCCTCCTATGAT...CAGAGACTGTCTCATCTCTCCACTCAACGTGGAAGTTGCCTTGTGCCTAAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp AGAGGGCAACAAAGGACTCCCTTCCTTTTTAAGACACTAACAGGTATGCCGGGAGGGGACAAGCCTTCGTaGGTTCCTAATCGACTGTCA +
Preference number: 4 (lower is better)
Translates to: RGQQRTPFLFKTLTGMPGGDKPS*VPNRLS
Trigger: TGACAGTCGATTAGGAACCCACGAAGGCTTGTCCCC...TCCCGGCATACCTGTTAGTGTCTTAAAAAGGAAGGGAGTCCTTTGTTGCCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp CAGTTTAGGCACAAGGCAACTTCCACGTTGAGTGGAGAGATGAGACAGTCTCTGCCACCAAAACCAGGCTaGCTCATCCCATTCGATGAA +
Preference number: 4 (lower is better)
Translates to: QFRHKATSTLSGEMRQSLPPKPG*LIPFDE
Trigger: TTCATCGAATGGGATGAGCCAGCCTGGTTTTGGTGG...CAGAGACTGTCTCATCTCTCCACTCAACGTGGAAGTTGCCTTGTGCCTAAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp CCCTTCCTTTTTAAGACACTAACAGGTATGCCGGGAATGCTAAGGGCCAATGGTGAGACATGTGGGATGTaGAGGTCCCCAGAATTCCAC +
Preference number: 4 (lower is better)
Translates to: PFLFKTLTGMPGMLRANGETCGM*RSPEFH
Trigger: GTGGAATTCTGGGGACCTCCACATCCCACATGTCTC...ACCATTGGCCCTTAGCATTCCCGGCATACCTGTTAGTGTCTTAAAAAGGAAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp CAGTTTAGGCACAAGGCAACTTCCACGTTGAGTGGAGAGATGAGACAGTCTCTGCAGCAGCATTCCCTCTaGTTCCTAGGATGCTATCTG +
Preference number: 4 (lower is better)
Translates to: QFRHKATSTLSGEMRQSLQQHSL*FLGCYL
Trigger: CAGATAGCATCCTAGGAACCAGAGGGAATGCTGCTG...CAGAGACTGTCTCATCTCTCCACTCAACGTGGAAGTTGCCTTGTGCCTAAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
3UTR CAA 72 bp GGGCTACAGAATCATGGAGCGGTCTTCTTCTCGAACTaGTGGCAGAGAATGAGTAGTATGGTGTTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: GLQNHGAVFFSN*WQRMSSMVFQA
Trigger: AGCCTGGAACACCATACTACTCATTCTCTGCCACAAGTTCGAGAAGAAGACCGCTCCATGATTCTGTAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183594.2
ENSMUST00000183647.8
ENSMUST00000184107.8
ENSMUST00000184416.8
3UTR CAA 72 bp GCATTCCCTCTGGTTCCTAGGATGCTATCTGATCCATaGATGGGAGGAGTATGTGAGGCGGCAACATATGGT +
Preference number: 4 (lower is better)
Translates to: AFPLVPRMLSDP*MGGVCEAATYG
Trigger: ACCATATGTTGCCGCCTCACATACTCCTCCCATCAATGGATCAGATAGCATCCTAGGAACCAGAGGGAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000184378.8
ENSMUST00000184416.8
ENSMUST00000184867.8
CDS-3UTR TCA 90 bp CATTTGTCAATTCAGTTTAGGCACAAGGCAACTTCCACGTTGAGTGGAGAGATGGGTACCTGTGAGAGGTaGAGGAGATCCCACTGGTGT +
Preference number: 4 (lower is better)
Translates to: HLSIQFRHKATSTLSGEMGTCER*RRSHWC
Trigger: ACACCAGTGGGATCTCCTTCACCTCTCACAGGTACC...CATCTCTCCACTCAACGTGGAAGTTGCCTTGTGCCTAAACTGAATTGACAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp CAGTTTAGGCACAAGGCAACTTCCACGTTGAGTGGAGAGATGAGACAGTCTCTGCTGCAGGGAGTGAAGTaGGTTTTCATAGCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: QFRHKATSTLSGEMRQSLLQGVK*VFIAWR
Trigger: TCTCCAAGCTATGAAAACTCACTTCACTCCCTGCAG...CAGAGACTGTCTCATCTCTCCACTCAACGTGGAAGTTGCCTTGTGCCTAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034755.13
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp AGAGGGCAACAAAGGACTCCCTTCCTTTTTAAGACACTAACAGGTATGCCGGGAGCCATTGAGACTGACTaGATCTTCCCGATGTGTTCC +
Preference number: 4 (lower is better)
Translates to: RGQQRTPFLFKTLTGMPGAIETD*IFPMCS
Trigger: GGAACACATCGGGAAGATTCAGTCAGTCTCAATGGC...TCCCGGCATACCTGTTAGTGTCTTAAAAAGGAAGGGAGTCCTTTGTTGCCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp CAGTTTAGGCACAAGGCAACTTCCACGTTGAGTGGAGAGATGAGACAGTCTCTGCTAGACAGGACCGAATaGTTGCCATTGAGACTGACT +
Preference number: 4 (lower is better)
Translates to: QFRHKATSTLSGEMRQSLLDRTE*LPLRLT
Trigger: AGTCAGTCTCAATGGCAATCATTCGGTCCTGTCTAG...CAGAGACTGTCTCATCTCTCCACTCAACGTGGAAGTTGCCTTGTGCCTAAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp CACGGACCAGCCAACTCAAAGGACAGAAGTAAAGCTAGGGTAAGGAACCGTGACGTTCAGTTCTGTGTTTaGGGCAGCAACAGTACTAGA +
Preference number: 4 (lower is better)
Translates to: HGPANSKDRSKARVRNRDVQFCV*GSNSTR
Trigger: TCTAGTACTGTTGCTGCCTCAAACACAGAACTGAAC...GTCACGGTTCCTTACCCTAGCTTTACTTCTGTCCTTTGAGTTGGCTGGTCCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp TACTACCACGGTGGAAGCTGGACATTGGCGGAAGACTTGTGTTTATGTCTGTTGCTTTTTCTGACAGCCTaGGAGTCCAGAGTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: YYHGGSWTLAEDLCLCLLLFLTA*ESRVSA
Trigger: AGCAGAGACTCTGGACTCTCAGGCTGTCAGAAAAAG...CAACAGACATAAACACAAGTCTTCCGCCAATGTCCAGCTTCCACCGTGGTAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000183647.8
CDS-3UTR GCA 90 bp TGGTACTACCACGGTGGAAGCTGGACATTGGCGGAAGACTTGTGTTTATGTCTGAGAGTCCAGAGTCTCTaGTGTACAGGGAAAATGAGC +
Preference number: 4 (lower is better)
Translates to: WYYHGGSWTLAEDLCLCLRVQSL*CTGKMS
Trigger: GCTCATTTTCCCTGTACAGCAGAGACTCTGGACTCT...CAGACATAAACACAAGTCTTCCGCCAATGTCCAGCTTCCACCGTGGTAGTACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183647.8
CDS-3UTR CCA 90 bp ACACTAACAGGTATGCCGGGAATGCTAAGGGCCAATGGTTGCCACTGCTCTGTGACTTCCCAGTGTTGTTaGTCTCGTTTTCCCACTATT +
Preference number: 4 (lower is better)
Translates to: TLTGMPGMLRANGCHCSVTSQCC*SRFPTI
Trigger: AATAGTGGGAAAACGAGACCAACAACACTGGGAAGT...CACAGAGCAGTGGCAACCATTGGCCCTTAGCATTCCCGGCATACCTGTTAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp AGAGGGCAACAAAGGACTCCCTTCCTTTTTAAGACACTAACAGGTATGCCGGGAATCATAGGAGGGGCTTaGTTGACCACTTGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: RGQQRTPFLFKTLTGMPGIIGGA*LTTCSP
Trigger: TGGGGAACAAGTGGTCAACCAAGCCCCTCCTATGAT...TCCCGGCATACCTGTTAGTGTCTTAAAAAGGAAGGGAGTCCTTTGTTGCCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp ACGTTGAGTGGAGAGATGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGATGTTCATGAAAGGTGTTaGGGACAAGCCTTCGTGGGT +
Preference number: 4 (lower is better)
Translates to: TLSGEMRQSLIVQKRHTDVHERC*GQAFVG
Trigger: ACCCACGAAGGCTTGTCCCCAACACCTTTCATGAAC...ATCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCATCTCTCCACTCAACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp TCTTCGCTTGTAAAGGATCTAGGGCTACAGAATCATGGAGCGGTCTTCTTCTCGGTTCATGAAAGGTGTTaGGGACAAGCCTTCGTGGGT +
Preference number: 4 (lower is better)
Translates to: SSLVKDLGLQNHGAVFFSVHERC*GQAFVG
Trigger: ACCCACGAAGGCTTGTCCCCAACACCTTTCATGAAC...CGAGAAGAAGACCGCTCCATGATTCTGTAGCCCTAGATCCTTTACAAGCGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000183647.8
ENSMUST00000184416.8
CDS-3UTR CCA 90 bp AAATCACTATTCATATGGCGAAGGTCGGAGAGGGCAACAAAGGACTCCCTTCCTGTTCATGAAAGGTGTTaGGGACAAGCCTTCGTGGGT +
Preference number: 4 (lower is better)
Translates to: KSLFIWRRSERATKDSLPVHERC*GQAFVG
Trigger: ACCCACGAAGGCTTGTCCCCAACACCTTTCATGAAC...AGGAAGGGAGTCCTTTGTTGCCCTCTCCGACCTTCGCCATATGAATAGTGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp AGAGGGCAACAAAGGACTCCCTTCCTTTTTAAGACACTAACAGGTATGCCGGGAGTTCATGAAAGGTGTTaGGGACAAGCCTTCGTGGGT +
Preference number: 4 (lower is better)
Translates to: RGQQRTPFLFKTLTGMPGVHERC*GQAFVG
Trigger: ACCCACGAAGGCTTGTCCCCAACACCTTTCATGAAC...TCCCGGCATACCTGTTAGTGTCTTAAAAAGGAAGGGAGTCCTTTGTTGCCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp AAGGACATGAACAAAGCATACAGGACTGCAAGGAGGGTTCTGGACTGTGACCATAGCGAACATACTGGTTaGTGGCTTGGGAGATGGGTA +
Preference number: 4 (lower is better)
Translates to: KDMNKAYRTARRVLDCDHSEHTG*WLGRWV
Trigger: TACCCATCTCCCAAGCCACCAACCAGTATGTTCGCT...ATGGTCACAGTCCAGAACCCTCCTTGCAGTCCTGTATGCTTTGTTCATGTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp CAGAAGCGACACACTGATTACAGCAGAGTGATATGCTGCAAACACCTCACGGCCAGGTCAGAAGAACTGTaGGTCCCATCTTGCATAAAG +
Preference number: 4 (lower is better)
Translates to: QKRHTDYSRVICCKHLTARSEEL*VPSCIK
Trigger: CTTTATGCAAGATGGGACCCACAGTTCTTCTGACCT...GGCCGTGAGGTGTTTGCAGCATATCACTCTGCTGTAATCAGTGTGTCGCTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp TTCAAGGACATGAACAAAGCATACAGGACTGCAAGGAGGGTTCTGGACTGTGACCCACCAAAACCAGGCTaGCTCATCCCATTCGATGAA +
Preference number: 4 (lower is better)
Translates to: FKDMNKAYRTARRVLDCDPPKPG*LIPFDE
Trigger: TTCATCGAATGGGATGAGCCAGCCTGGTTTTGGTGG...GTCACAGTCCAGAACCCTCCTTGCAGTCCTGTATGCTTTGTTCATGTCCTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp CCCTTCCTTTTTAAGACACTAACAGGTATGCCGGGAATGCTAAGGGCCAATGGTCCACCAAAACCAGGCTaGCTCATCCCATTCGATGAA +
Preference number: 4 (lower is better)
Translates to: PFLFKTLTGMPGMLRANGPPKPG*LIPFDE
Trigger: TTCATCGAATGGGATGAGCCAGCCTGGTTTTGGTGG...ACCATTGGCCCTTAGCATTCCCGGCATACCTGTTAGTGTCTTAAAAAGGAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp AGAGGGCAACAAAGGACTCCCTTCCTTTTTAAGACACTAACAGGTATGCCGGGACCACCAAAACCAGGCTaGCTCATCCCATTCGATGAA +
Preference number: 4 (lower is better)
Translates to: RGQQRTPFLFKTLTGMPGPPKPG*LIPFDE
Trigger: TTCATCGAATGGGATGAGCCAGCCTGGTTTTGGTGG...TCCCGGCATACCTGTTAGTGTCTTAAAAAGGAAGGGAGTCCTTTGTTGCCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp CCCTTCCTTTTTAAGACACTAACAGGTATGCCGGGAATGCTAAGGGCCAATGGTGGCTGCCATAACTACTaGACTGAGACATGTGGGATG +
Preference number: 4 (lower is better)
Translates to: PFLFKTLTGMPGMLRANGGCHNY*TETCGM
Trigger: CATCCCACATGTCTCAGTCCAGTAGTTATGGCAGCC...ACCATTGGCCCTTAGCATTCCCGGCATACCTGTTAGTGTCTTAAAAAGGAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp CCCTTCCTTTTTAAGACACTAACAGGTATGCCGGGAATGCTAAGGGCCAATGGTCAGCAGCATTCCCTCTaGTTCCTAGGATGCTATCTG +
Preference number: 4 (lower is better)
Translates to: PFLFKTLTGMPGMLRANGQQHSL*FLGCYL
Trigger: CAGATAGCATCCTAGGAACCAGAGGGAATGCTGCTG...ACCATTGGCCCTTAGCATTCCCGGCATACCTGTTAGTGTCTTAAAAAGGAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp TTTTTCCTATTTCATGGAAATCACTATTCATATGGCGAAGGTCGGAGAGGGCAACTTGCCCTCCAGCTCTaGGCCACTGACTGGTACCTG +
Preference number: 4 (lower is better)
Translates to: FFLFHGNHYSYGEGRRGQLALQL*ATDWYL
Trigger: CAGGTACCAGTCAGTGGCCCAGAGCTGGAGGGCAAG...TTGCCCTCTCCGACCTTCGCCATATGAATAGTGATTTCCATGAAATAGGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp ACTGACAGGTACAGCTCGGTGCTAATCTGGCTCTTCTTGGGGTGGGGGCAGGTGACCTCTGAAATTTTCTaGTGTTTTATGGTTCAGTTC +
Preference number: 4 (lower is better)
Translates to: TDRYSSVLIWLFLGWGQVTSEIF*CFMVQF
Trigger: GAACTGAACCATAAAACACCAGAAAATTTCAGAGGT...CACCTGCCCCCACCCCAAGAAGAGCCAGATTAGCACCGAGCTGTACCTGTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp ACACTAACAGGTATGCCGGGAATGCTAAGGGCCAATGGTTGCCACTGCTCTGTGACCTTGATGTCTTTCTaGGAGGACTCATCATCTGAT +
Preference number: 4 (lower is better)
Translates to: TLTGMPGMLRANGCHCSVTLMSF*EDSSSD
Trigger: ATCAGATGATGAGTCCTCCCAGAAAGACATCAAGGT...CACAGAGCAGTGGCAACCATTGGCCCTTAGCATTCCCGGCATACCTGTTAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp TCATATGGCGAAGGTCGGAGAGGGCAACAAAGGACTCCCTTCCTTTTTAAGACAGATCCTCGTCTTCATTaGTACTGCTTGTTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: SYGEGRRGQQRTPFLFKTDPRLH*YCLFCP
Trigger: GGGGCAGAACAAGCAGTACCAATGAAGACGAGGATC...TGTCTTAAAAAGGAAGGGAGTCCTTTGTTGCCCTCTCCGACCTTCGCCATATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp CCCTTCCTTTTTAAGACACTAACAGGTATGCCGGGAATGCTAAGGGCCAATGGTGATCCTCGTCTTCATTaGTACTGCTTGTTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: PFLFKTLTGMPGMLRANGDPRLH*YCLFCP
Trigger: GGGGCAGAACAAGCAGTACCAATGAAGACGAGGATC...ACCATTGGCCCTTAGCATTCCCGGCATACCTGTTAGTGTCTTAAAAAGGAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp AGAGGGCAACAAAGGACTCCCTTCCTTTTTAAGACACTAACAGGTATGCCGGGAGCTCATCCCATTCGATaGACTCCAAAGGTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: RGQQRTPFLFKTLTGMPGAHPIR*TPKVRR
Trigger: TCTTCTGACCTTTGGAGTTCATCGAATGGGATGAGC...TCCCGGCATACCTGTTAGTGTCTTAAAAAGGAAGGGAGTCCTTTGTTGCCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp TCATATGGCGAAGGTCGGAGAGGGCAACAAAGGACTCCCTTCCTTTTTAAGACAGCTCATCCCATTCGATaGACTCCAAAGGTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: SYGEGRRGQQRTPFLFKTAHPIR*TPKVRR
Trigger: TCTTCTGACCTTTGGAGTTCATCGAATGGGATGAGC...TGTCTTAAAAAGGAAGGGAGTCCTTTGTTGCCCTCTCCGACCTTCGCCATATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp GCTTTAACAATGCTGGCATCAGCTGAGTGTACATCAGCTTCCCACATGAACTTTTTCATAGCTTGGAGATaGAGGAGCTTGCCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ALTMLASAECTSASHMNFFIAWR*RSLPSS
Trigger: GCTGGAGGGCAAGCTCCTTCATCTCCAAGCTATGAA...AAAGTTCATGTGGGAAGCTGATGTACACTCAGCTGATGCCAGCATTGTTAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp CCCTTCCTTTTTAAGACACTAACAGGTATGCCGGGAATGCTAAGGGCCAATGGTCTAGACAGGACCGAATaGTTGCCATTGAGACTGACT +
Preference number: 4 (lower is better)
Translates to: PFLFKTLTGMPGMLRANGLDRTE*LPLRLT
Trigger: AGTCAGTCTCAATGGCAATCATTCGGTCCTGTCTAG...ACCATTGGCCCTTAGCATTCCCGGCATACCTGTTAGTGTCTTAAAAAGGAAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp AGAGGGCAACAAAGGACTCCCTTCCTTTTTAAGACACTAACAGGTATGCCGGGACTAGACAGGACCGAATaGTTGCCATTGAGACTGACT +
Preference number: 4 (lower is better)
Translates to: RGQQRTPFLFKTLTGMPGLDRTE*LPLRLT
Trigger: AGTCAGTCTCAATGGCAATCATTCGGTCCTGTCTAG...TCCCGGCATACCTGTTAGTGTCTTAAAAAGGAAGGGAGTCCTTTGTTGCCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp TCATATGGCGAAGGTCGGAGAGGGCAACAAAGGACTCCCTTCCTTTTTAAGACACTAGACAGGACCGAATaGTTGCCATTGAGACTGACT +
Preference number: 4 (lower is better)
Translates to: SYGEGRRGQQRTPFLFKTLDRTE*LPLRLT
Trigger: AGTCAGTCTCAATGGCAATCATTCGGTCCTGTCTAG...TGTCTTAAAAAGGAAGGGAGTCCTTTGTTGCCCTCTCCGACCTTCGCCATATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp AGAGGGCAACAAAGGACTCCCTTCCTTTTTAAGACACTAACAGGTATGCCGGGATCTTGCAAATGCTCGTaGAGTTGCTGCTCAACTCGA +
Preference number: 4 (lower is better)
Translates to: RGQQRTPFLFKTLTGMPGSCKCS*SCCSTR
Trigger: TCGAGTTGAGCAGCAACTTCACGAGCATTTGCAAGA...TCCCGGCATACCTGTTAGTGTCTTAAAAAGGAAGGGAGTCCTTTGTTGCCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
CDS-3UTR GCA 90 bp ACGTTGAGTGGAGAGATGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGATAGAGTCCAGAGTCTCTaGTGTACAGGGAAAATGAGC +
Preference number: 4 (lower is better)
Translates to: TLSGEMRQSLIVQKRHTDRVQSL*CTGKMS
Trigger: GCTCATTTTCCCTGTACAGCAGAGACTCTGGACTCT...ATCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCATCTCTCCACTCAACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR GCA 90 bp TCTTCTGTGCAGACTGCCACTGCTATTGGCTTTAAGGAGTTACTTAGCCAAGACTCTCTTAAGGCAGGCTaGTTTGGGGTTGAGGTTCCT +
Preference number: 4 (lower is better)
Translates to: SSVQTATAIGFKELLSQDSLKAG*FGVEVP
Trigger: AGGAACCTCAACCCCAAAGCAGCCTGCCTTAAGAGA...GTCTTGGCTAAGTAACTCCTTAAAGCCAATAGCAGTGGCAGTCTGCACAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp CACGGACCAGCCAACTCAAAGGACAGAAGTAAAGCTAGGGTAAGGAACCGTGACCCCACTATTAACAGGTaGAGAAAACATCGCACTGAA +
Preference number: 4 (lower is better)
Translates to: HGPANSKDRSKARVRNRDPTINR*RKHRTE
Trigger: TTCAGTGCGATGTTTTCTCCACCTGTTAATAGTGGG...GTCACGGTTCCTTACCCTAGCTTTACTTCTGTCCTTTGAGTTGGCTGGTCCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184867.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp CATTTGTCAATTCAGTTTAGGCACAAGGCAACTTCCACGTTGAGTGGAGAGATGGGGGACAAGCCTTCGTaGGTTCCTAATCGACTGTCA +
Preference number: 4 (lower is better)
Translates to: HLSIQFRHKATSTLSGEMGDKPS*VPNRLS
Trigger: TGACAGTCGATTAGGAACCCACGAAGGCTTGTCCCC...CATCTCTCCACTCAACGTGGAAGTTGCCTTGTGCCTAAACTGAATTGACAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp GCCAACTCAAAGGACAGAAGTAAAGCTAGGGTAAGGAACCGTGACCATTGCTCTGAACATACTGGTTGGTaGCTTGGGAGATGGGTAACT +
Preference number: 4 (lower is better)
Translates to: ANSKDRSKARVRNRDHCSEHTGW*LGRWVT
Trigger: AGTTACCCATCTCCCAAGCCACCAACCAGTATGTTC...AGAGCAATGGTCACGGTTCCTTACCCTAGCTTTACTTCTGTCCTTTGAGTTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp AGAGGGCAACAAAGGACTCCCTTCCTTTTTAAGACACTAACAGGTATGCCGGGAGAACATACTGGTTGGTaGCTTGGGAGATGGGTAACT +
Preference number: 4 (lower is better)
Translates to: RGQQRTPFLFKTLTGMPGEHTGW*LGRWVT
Trigger: AGTTACCCATCTCCCAAGCCACCAACCAGTATGTTC...TCCCGGCATACCTGTTAGTGTCTTAAAAAGGAAGGGAGTCCTTTGTTGCCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp CCCTTCCTTTTTAAGACACTAACAGGTATGCCGGGAATGCTAAGGGCCAATGGTGAACATACTGGTTGGTaGCTTGGGAGATGGGTAACT +
Preference number: 4 (lower is better)
Translates to: PFLFKTLTGMPGMLRANGEHTGW*LGRWVT
Trigger: AGTTACCCATCTCCCAAGCCACCAACCAGTATGTTC...ACCATTGGCCCTTAGCATTCCCGGCATACCTGTTAGTGTCTTAAAAAGGAAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp GTGTTCACCAGAGTCCTGATGGAGGATCTGAAGTGCTGTCTTCATGGTTTTTGTAGCGAACATACTGGTTaGTGGCTTGGGAGATGGGTA +
Preference number: 4 (lower is better)
Translates to: VFTRVLMEDLKCCLHGFCSEHTG*WLGRWV
Trigger: TACCCATCTCCCAAGCCACCAACCAGTATGTTCGCT...ACAAAAACCATGAAGACAGCACTTCAGATCCTCCATCAGGACTCTGGTGAACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp GTGTTCACCAGAGTCCTGATGGAGGATCTGAAGTGCTGTCTTCATGGTTTTTGTCCACCAAAACCAGGCTaGCTCATCCCATTCGATGAA +
Preference number: 4 (lower is better)
Translates to: VFTRVLMEDLKCCLHGFCPPKPG*LIPFDE
Trigger: TTCATCGAATGGGATGAGCCAGCCTGGTTTTGGTGG...ACAAAAACCATGAAGACAGCACTTCAGATCCTCCATCAGGACTCTGGTGAACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp TTAAGGAGTTACTTAGCCAAGACCATCACGCTTAGCATGTTTTTCTCTCCCAGGGAGACATGTGGGATGTaGAGGTCCCCAGAATTCCAC +
Preference number: 4 (lower is better)
Translates to: LRSYLAKTITLSMFFSPRETCGM*RSPEFH
Trigger: GTGGAATTCTGGGGACCTCCACATCCCACATGTCTC...CCTGGGAGAGAAAAACATGCTAAGCGTGATGGTCTTGGCTAAGTAACTCCTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp GCTTTAACAATGCTGGCATCAGCTGAGTGTACATCAGCTTCCCACATGAACTTTGAGACATGTGGGATGTaGAGGTCCCCAGAATTCCAC +
Preference number: 4 (lower is better)
Translates to: ALTMLASAECTSASHMNFETCGM*RSPEFH
Trigger: GTGGAATTCTGGGGACCTCCACATCCCACATGTCTC...AAAGTTCATGTGGGAAGCTGATGTACACTCAGCTGATGCCAGCATTGTTAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp CACGGACCAGCCAACTCAAAGGACAGAAGTAAAGCTAGGGTAAGGAACCGTGACACCTTGATGTCTTTCTaGGAGGACTCATCATCTGAT +
Preference number: 4 (lower is better)
Translates to: HGPANSKDRSKARVRNRDTLMSF*EDSSSD
Trigger: ATCAGATGATGAGTCCTCCCAGAAAGACATCAAGGT...GTCACGGTTCCTTACCCTAGCTTTACTTCTGTCCTTTGAGTTGGCTGGTCCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp AGTTACAGAACGACTTGGGATTTTTCTTCTGTGCAGACTGCCACTGCTATTGGCACTCAAGCGGTCATGTaGATGAAGGCTGCCATAACT +
Preference number: 4 (lower is better)
Translates to: SYRTTWDFSSVQTATAIGTQAVM*MKAAIT
Trigger: AGTTATGGCAGCCTTCATTCACATGACCGCTTGAGT...GCCAATAGCAGTGGCAGTCTGCACAGAAGAAAAATCCCAAGTCGTTCTGTAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp CCACAGATAGAGTCTGATCTAACTGGAGAACATATACAAATTAAGTCCACTAAGCCAGCTCTGGGCCACTaGCTGGTACCTGTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: PQIESDLTGEHIQIKSTKPALGH*LVPVRG
Trigger: ACCTCTCACAGGTACCAGTCAGTGGCCCAGAGCTGG...CTTAGTGGACTTAATTTGTATATGTTCTCCAGTTAGATCAGACTCTATCTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp TGTCCAAATCTTATGAGGAGAGGTCACCTTCTATTTAGCCTACTGATGACTCTGTTCATAGCTTGGAGATaGAGGAGCTTGCCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: CPNLMRRGHLLFSLLMTLFIAWR*RSLPSS
Trigger: GCTGGAGGGCAAGCTCCTTCATCTCCAAGCTATGAA...CAGAGTCATCAGTAGGCTAAATAGAAGGTGACCTCTCCTCATAAGATTTGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp AAGGACATGAACAAAGCATACAGGACTGCAAGGAGGGTTCTGGACTGTGACCATGTTCAGTTCTGTGTTTaGGGCAGCAACAGTACTAGA +
Preference number: 4 (lower is better)
Translates to: KDMNKAYRTARRVLDCDHVQFCV*GSNSTR
Trigger: TCTAGTACTGTTGCTGCCTCAAACACAGAACTGAAC...ATGGTCACAGTCCAGAACCCTCCTTGCAGTCCTGTATGCTTTGTTCATGTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp GCCAACTCAAAGGACAGAAGTAAAGCTAGGGTAAGGAACCGTGACCATTGCTCTGTTCAGTTCTGTGTTTaGGGCAGCAACAGTACTAGA +
Preference number: 4 (lower is better)
Translates to: ANSKDRSKARVRNRDHCSVQFCV*GSNSTR
Trigger: TCTAGTACTGTTGCTGCCTCAAACACAGAACTGAAC...AGAGCAATGGTCACGGTTCCTTACCCTAGCTTTACTTCTGTCCTTTGAGTTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp ACACTAACAGGTATGCCGGGAATGCTAAGGGCCAATGGTTGCCACTGCTCTGTGCTTTGTTTTCAGTCTTaGTTTCTGTTGGAACAACAC +
Preference number: 4 (lower is better)
Translates to: TLTGMPGMLRANGCHCSVLCFQS*FLLEQH
Trigger: GTGTTGTTCCAACAGAAATCAAGACTGAAAACAAAG...CACAGAGCAGTGGCAACCATTGGCCCTTAGCATTCCCGGCATACCTGTTAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp GAACTGTGGGTCCCATCTTGCATAAAGAAAGTGCTAGCGAACATACTGGTTGGTTCTTGCATCTTTTTCTaGCAGCCTGAGAGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: ELWVPSCIKKVLANILVGSCIFF*QPESPE
Trigger: CTCTGGACTCTCAGGCTGTCAGAAAAAGATGCAAGA...ACCAACCAGTATGTTCGCTAGCACTTTCTTTATGCAAGATGGGACCCACAGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000183647.8
CDS-3UTR GCA 90 bp AAATCACTATTCATATGGCGAAGGTCGGAGAGGGCAACAAAGGACTCCCTTCCTCATGTGAATGAAGGCTaGCATAACTACTGGACTGAG +
Preference number: 4 (lower is better)
Translates to: KSLFIWRRSERATKDSLPHVNEG*HNYWTE
Trigger: CTCAGTCCAGTAGTTATGGCAGCCTTCATTCACATG...AGGAAGGGAGTCCTTTGTTGCCCTCTCCGACCTTCGCCATATGAATAGTGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR GCA 90 bp CAGTTTAGGCACAAGGCAACTTCCACGTTGAGTGGAGAGATGAGACAGTCTCTGTTCCTCTCTCTCACTTaGTGTTCTAGACTAAGGATG +
Preference number: 4 (lower is better)
Translates to: QFRHKATSTLSGEMRQSLFLSLT*CSRLRM
Trigger: CATCCTTAGTCTAGAACAGCAAGTGAGAGAGAGGAA...CAGAGACTGTCTCATCTCTCCACTCAACGTGGAAGTTGCCTTGTGCCTAAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp GCTTTAACAATGCTGGCATCAGCTGAGTGTACATCAGCTTCCCACATGAACTTTATCATAGGAGGGGCTTaGTTGACCACTTGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: ALTMLASAECTSASHMNFIIGGA*LTTCSP
Trigger: TGGGGAACAAGTGGTCAACCAAGCCCCTCCTATGAT...AAAGTTCATGTGGGAAGCTGATGTACACTCAGCTGATGCCAGCATTGTTAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp CAGTTTAGGCACAAGGCAACTTCCACGTTGAGTGGAGAGATGAGACAGTCTCTGGTCAGAATTTGGGGATaGTGCATATACAGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: QFRHKATSTLSGEMRQSLVRIWG*CIYRRR
Trigger: CCTTCTTCTGTATATGCACCATCCCCAAATTCTGAC...CAGAGACTGTCTCATCTCTCCACTCAACGTGGAAGTTGCCTTGTGCCTAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp GTCCCGGAGACTCACCAGGAAAAGTCATCTTTGTATTGTACTGAATGCATTCTGGGCTGCCATAACTACTaGACTGAGACATGTGGGATG +
Preference number: 4 (lower is better)
Translates to: VPETHQEKSSLYCTECILGCHNY*TETCGM
Trigger: CATCCCACATGTCTCAGTCCAGTAGTTATGGCAGCC...CAGAATGCATTCAGTACAATACAAAGATGACTTTTCCTGGTGAGTCTCCGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp GCCAACTCAAAGGACAGAAGTAAAGCTAGGGTAAGGAACCGTGACCATTGCTCTGTGGAAGCTGGACATTaGCGGAAGACTTGTGTTTAT +
Preference number: 4 (lower is better)
Translates to: ANSKDRSKARVRNRDHCSVEAGH*RKTCVY
Trigger: ATAAACACAAGTCTTCCGCCAATGTCCAGCTTCCAC...AGAGCAATGGTCACGGTTCCTTACCCTAGCTTTACTTCTGTCCTTTGAGTTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp AAATCACTATTCATATGGCGAAGGTCGGAGAGGGCAACAAAGGACTCCCTTCCTGTGGAAGCTGGACATTaGCGGAAGACTTGTGTTTAT +
Preference number: 4 (lower is better)
Translates to: KSLFIWRRSERATKDSLPVEAGH*RKTCVY
Trigger: ATAAACACAAGTCTTCCGCCAATGTCCAGCTTCCAC...AGGAAGGGAGTCCTTTGTTGCCCTCTCCGACCTTCGCCATATGAATAGTGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp ACGTTGAGTGGAGAGATGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGATCCAATTGATGCATTATaGGATGGTCCCAGCAAACTG +
Preference number: 4 (lower is better)
Translates to: TLSGEMRQSLIVQKRHTDPIDAL*DGPSKL
Trigger: CAGTTTGCTGGGACCATCCCATAATGCATCAATTGG...ATCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCATCTCTCCACTCAACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp AAATCACTATTCATATGGCGAAGGTCGGAGAGGGCAACAAAGGACTCCCTTCCTCCAATTGATGCATTATaGGATGGTCCCAGCAAACTG +
Preference number: 4 (lower is better)
Translates to: KSLFIWRRSERATKDSLPPIDAL*DGPSKL
Trigger: CAGTTTGCTGGGACCATCCCATAATGCATCAATTGG...AGGAAGGGAGTCCTTTGTTGCCCTCTCCGACCTTCGCCATATGAATAGTGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp GTCCCGGAGACTCACCAGGAAAAGTCATCTTTGTATTGTACTGAATGCATTCTGGATCCTCGTCTTCATTaGTACTGCTTGTTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: VPETHQEKSSLYCTECILDPRLH*YCLFCP
Trigger: GGGGCAGAACAAGCAGTACCAATGAAGACGAGGATC...CAGAATGCATTCAGTACAATACAAAGATGACTTTTCCTGGTGAGTCTCCGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp AAATCACTATTCATATGGCGAAGGTCGGAGAGGGCAACAAAGGACTCCCTTCCTATTGAGGTTTCCAATTaGTGCATTATGGGATGGTCC +
Preference number: 4 (lower is better)
Translates to: KSLFIWRRSERATKDSLPIEVSN*CIMGWS
Trigger: GGACCATCCCATAATGCATCAATTGGAAACCTCAAT...AGGAAGGGAGTCCTTTGTTGCCCTCTCCGACCTTCGCCATATGAATAGTGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp TCATATGGCGAAGGTCGGAGAGGGCAACAAAGGACTCCCTTCCTTTTTAAGACAATTGAGGTTTCCAATTaGTGCATTATGGGATGGTCC +
Preference number: 4 (lower is better)
Translates to: SYGEGRRGQQRTPFLFKTIEVSN*CIMGWS
Trigger: GGACCATCCCATAATGCATCAATTGGAAACCTCAAT...TGTCTTAAAAAGGAAGGGAGTCCTTTGTTGCCCTCTCCGACCTTCGCCATATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp CACGGACCAGCCAACTCAAAGGACAGAAGTAAAGCTAGGGTAAGGAACCGTGACCTCCATAGTTTGAATTaGGGTTTCCAATTGATGCAT +
Preference number: 4 (lower is better)
Translates to: HGPANSKDRSKARVRNRDLHSLN*GFQLMH
Trigger: ATGCATCAATTGGAAACCTCAATTCAAACTATGGAG...GTCACGGTTCCTTACCCTAGCTTTACTTCTGTCCTTTGAGTTGGCTGGTCCGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR GCA 90 bp TTAAGGAGTTACTTAGCCAAGACCATCACGCTTAGCATGTTTTTCTCTCCCAGGAGAGTCCAGAGTCTCTaGTGTACAGGGAAAATGAGC +
Preference number: 4 (lower is better)
Translates to: LRSYLAKTITLSMFFSPRRVQSL*CTGKMS
Trigger: GCTCATTTTCCCTGTACAGCAGAGACTCTGGACTCT...CCTGGGAGAGAAAAACATGCTAAGCGTGATGGTCTTGGCTAAGTAACTCCTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000185117.8
CDS-3UTR GCA 90 bp GTGTTCACCAGAGTCCTGATGGAGGATCTGAAGTGCTGTCTTCATGGTTTTTGTCATGTGAATGAAGGCTaGCATAACTACTGGACTGAG +
Preference number: 4 (lower is better)
Translates to: VFTRVLMEDLKCCLHGFCHVNEG*HNYWTE
Trigger: CTCAGTCCAGTAGTTATGGCAGCCTTCATTCACATG...ACAAAAACCATGAAGACAGCACTTCAGATCCTCCATCAGGACTCTGGTGAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR GCA 90 bp TTCAAGGACATGAACAAAGCATACAGGACTGCAAGGAGGGTTCTGGACTGTGACTTGATGGAAAACTACTaGTTGTGTGGTCAGGGGAAT +
Preference number: 4 (lower is better)
Translates to: FKDMNKAYRTARRVLDCDLMENY*LCGQGN
Trigger: ATTCCCCTGACCACACAAGCAGTAGTTTTCCATCAA...GTCACAGTCCAGAACCCTCCTTGCAGTCCTGTATGCTTTGTTCATGTCCTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR GCA 90 bp CCCTTCCTTTTTAAGACACTAACAGGTATGCCGGGAATGCTAAGGGCCAATGGTTTGATGGAAAACTACTaGTTGTGTGGTCAGGGGAAT +
Preference number: 4 (lower is better)
Translates to: PFLFKTLTGMPGMLRANGLMENY*LCGQGN
Trigger: ATTCCCCTGACCACACAAGCAGTAGTTTTCCATCAA...ACCATTGGCCCTTAGCATTCCCGGCATACCTGTTAGTGTCTTAAAAAGGAAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR GCA 90 bp AAGGACATGAACAAAGCATACAGGACTGCAAGGAGGGTTCTGGACTGTGACCATTTGATGGAAAACTACTaGTTGTGTGGTCAGGGGAAT +
Preference number: 4 (lower is better)
Translates to: KDMNKAYRTARRVLDCDHLMENY*LCGQGN
Trigger: ATTCCCCTGACCACACAAGCAGTAGTTTTCCATCAA...ATGGTCACAGTCCAGAACCCTCCTTGCAGTCCTGTATGCTTTGTTCATGTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR GCA 90 bp AAATCACTATTCATATGGCGAAGGTCGGAGAGGGCAACAAAGGACTCCCTTCCTTTGATGGAAAACTACTaGTTGTGTGGTCAGGGGAAT +
Preference number: 4 (lower is better)
Translates to: KSLFIWRRSERATKDSLPLMENY*LCGQGN
Trigger: ATTCCCCTGACCACACAAGCAGTAGTTTTCCATCAA...AGGAAGGGAGTCCTTTGTTGCCCTCTCCGACCTTCGCCATATGAATAGTGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR GCA 90 bp AAATCACTATTCATATGGCGAAGGTCGGAGAGGGCAACAAAGGACTCCCTTCCTTTCCTCTCTCTCACTTaGTGTTCTAGACTAAGGATG +
Preference number: 4 (lower is better)
Translates to: KSLFIWRRSERATKDSLPFLSLT*CSRLRM
Trigger: CATCCTTAGTCTAGAACAGCAAGTGAGAGAGAGGAA...AGGAAGGGAGTCCTTTGTTGCCCTCTCCGACCTTCGCCATATGAATAGTGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR GCA 90 bp AGAGGGCAACAAAGGACTCCCTTCCTTTTTAAGACACTAACAGGTATGCCGGGATTCCTCTCTCTCACTTaGTGTTCTAGACTAAGGATG +
Preference number: 4 (lower is better)
Translates to: RGQQRTPFLFKTLTGMPGFLSLT*CSRLRM
Trigger: CATCCTTAGTCTAGAACAGCAAGTGAGAGAGAGGAA...TCCCGGCATACCTGTTAGTGTCTTAAAAAGGAAGGGAGTCCTTTGTTGCCCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR GCA 90 bp AGACCTTCAGGTGATAAGAAAATGCTGTCCTGTGTGCAATGCAATGCAGCAGCCACATCAAAGAATTGTTaGCCATTCCAGGGACAGGAT +
Preference number: 4 (lower is better)
Translates to: RPSGDKKMLSCVQCNAAATSKNC*PFQGQD
Trigger: ATCCTGTCCCTGGAATGGGCAACAATTCTTTGATGT...GGCTGCTGCATTGCATTGCACACAGGACAGCATTTTCTTATCACCTGAAGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184378.8
CDS-3UTR GCA 90 bp CATATCAGACATTCTGAAAACGTGGGACAGAGAGGTTTCTCCCACAGCAAGCCTCACTGCCTGAATTTGTaGACAGATACTCCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: HIRHSENVGQRGFSHSKPHCLNL*TDTPVF
Trigger: GAAAACAGGAGTATCTGTGCACAAATTCAGGCAGTG...AGGCTTGCTGTGGGAGAAACCTCTCTGTCCCACGTTTTCAGAATGTCTGATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184029.2
CDS-3UTR CCA 90 bp GTCCAGAGTCTCTGCTGTACAGGGAAAATGAGCCTCTCTCTGATGTTTTCCCTACCCACTATTAACAGGTaGAGAAAACATCGCACTGAA +
Preference number: 4 (lower is better)
Translates to: VQSLCCTGKMSLSLMFSLPTINR*RKHRTE
Trigger: TTCAGTGCGATGTTTTCTCCACCTGTTAATAGTGGG...TAGGGAAAACATCAGAGAGAGGCTCATTTTCCCTGTACAGCAGAGACTCTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000183594.2
ENSMUST00000184107.8
CDS-3UTR CCA 90 bp GTCCCATCTTGCATAAAGAAAGTGCTAGCGAACATACTGGTTGGTGGCTTGGGACCCACTATTAACAGGTaGAGAAAACATCGCACTGAA +
Preference number: 4 (lower is better)
Translates to: VPSCIKKVLANILVGGLGPTINR*RKHRTE
Trigger: TTCAGTGCGATGTTTTCTCCACCTGTTAATAGTGGG...TCCCAAGCCACCAACCAGTATGTTCGCTAGCACTTTCTTTATGCAAGATGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184107.8
ENSMUST00000184867.8
CDS-3UTR CCA 90 bp TTCAAGGACATGAACAAAGCATACAGGACTGCAAGGAGGGTTCTGGACTGTGACACTTCCCAGTGTTGTTaGTCTCGTTTTCCCACTATT +
Preference number: 4 (lower is better)
Translates to: FKDMNKAYRTARRVLDCDTSQCC*SRFPTI
Trigger: AATAGTGGGAAAACGAGACCAACAACACTGGGAAGT...GTCACAGTCCAGAACCCTCCTTGCAGTCCTGTATGCTTTGTTCATGTCCTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp CCCTTCCTTTTTAAGACACTAACAGGTATGCCGGGAATGCTAAGGGCCAATGGTACTTCCCAGTGTTGTTaGTCTCGTTTTCCCACTATT +
Preference number: 4 (lower is better)
Translates to: PFLFKTLTGMPGMLRANGTSQCC*SRFPTI
Trigger: AATAGTGGGAAAACGAGACCAACAACACTGGGAAGT...ACCATTGGCCCTTAGCATTCCCGGCATACCTGTTAGTGTCTTAAAAAGGAAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp GCCAACTCAAAGGACAGAAGTAAAGCTAGGGTAAGGAACCGTGACCATTGCTCTGTCAGAATTTGGGGATaGTGCATATACAGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: ANSKDRSKARVRNRDHCSVRIWG*CIYRRR
Trigger: CCTTCTTCTGTATATGCACCATCCCCAAATTCTGAC...AGAGCAATGGTCACGGTTCCTTACCCTAGCTTTACTTCTGTCCTTTGAGTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp TTAAGGAGTTACTTAGCCAAGACCATCACGCTTAGCATGTTTTTCTCTCCCAGGGAACATACTGGTTGGTaGCTTGGGAGATGGGTAACT +
Preference number: 4 (lower is better)
Translates to: LRSYLAKTITLSMFFSPREHTGW*LGRWVT
Trigger: AGTTACCCATCTCCCAAGCCACCAACCAGTATGTTC...CCTGGGAGAGAAAAACATGCTAAGCGTGATGGTCTTGGCTAAGTAACTCCTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp AGTTACAGAACGACTTGGGATTTTTCTTCTGTGCAGACTGCCACTGCTATTGGCAGGTCAGAAGAACTGTaGGTCCCATCTTGCATAAAG +
Preference number: 4 (lower is better)
Translates to: SYRTTWDFSSVQTATAIGRSEEL*VPSCIK
Trigger: CTTTATGCAAGATGGGACCCACAGTTCTTCTGACCT...GCCAATAGCAGTGGCAGTCTGCACAGAAGAAAAATCCCAAGTCGTTCTGTAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp TCTTCTGTGCAGACTGCCACTGCTATTGGCTTTAAGGAGTTACTTAGCCAAGACCCAATTGATGCATTATaGGATGGTCCCAGCAAACTG +
Preference number: 4 (lower is better)
Translates to: SSVQTATAIGFKELLSQDPIDAL*DGPSKL
Trigger: CAGTTTGCTGGGACCATCCCATAATGCATCAATTGG...GTCTTGGCTAAGTAACTCCTTAAAGCCAATAGCAGTGGCAGTCTGCACAGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp CCCTTCCTTTTTAAGACACTAACAGGTATGCCGGGAATGCTAAGGGCCAATGGTACCTTGATGTCTTTCTaGGAGGACTCATCATCTGAT +
Preference number: 4 (lower is better)
Translates to: PFLFKTLTGMPGMLRANGTLMSF*EDSSSD
Trigger: ATCAGATGATGAGTCCTCCCAGAAAGACATCAAGGT...ACCATTGGCCCTTAGCATTCCCGGCATACCTGTTAGTGTCTTAAAAAGGAAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
3UTR CAA 72 bp TTGTCAATTCAGTTTAGGCACAAGGCAACTTCCACGTaGAGTGGAGAGATGAGACAGTCTCTGATTGTGCAG +
Preference number: 4 (lower is better)
Translates to: LSIQFRHKATST*SGEMRQSLIVQ
Trigger: CTGCACAATCAGAGACTGTCTCATCTCTCCACTCAACGTGGAAGTTGCCTTGTGCCTAAACTGAATTGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR CAA 72 bp CTTGGGATTTTTCTTCTGTGCAGACTGCCACTGCTATaGGCTTTAAGGAGTTACTTAGCCAAGACCATCACG +
Preference number: 4 (lower is better)
Translates to: LGIFLLCRLPLL*ALRSYLAKTIT
Trigger: CGTGATGGTCTTGGCTAAGTAACTCCTTAAAGCCAATAGCAGTGGCAGTCTGCACAGAAGAAAAATCCCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
3UTR CAA 72 bp TCATTGGTACTGCTTGTTCTGCCCCTAGATGAGACCTaGATGTCTTTCTGGGAGGACTCATCATCTGATTTC +
Preference number: 4 (lower is better)
Translates to: SLVLLVLPLDET*MSFWEDSSSDF
Trigger: GAAATCAGATGATGAGTCCTCCCAGAAAGACATCAAGGTCTCATCTAGGGGCAGAACAAGCAGTACCAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184867.8
3UTR CAA 72 bp TCGATTTTCTGTTCTGGATTCAGATCCTCGTCTTCATaGGTACTGCTTGTTCTGCCCCTAGATGAGACCTTG +
Preference number: 4 (lower is better)
Translates to: SIFCSGFRSSSS*VLLVLPLDETL
Trigger: CAAGGTCTCATCTAGGGGCAGAACAAGCAGTACCAATGAAGACGAGGATCTGAATCCAGAACAGAAAATCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184867.8
CDS-3UTR TCA 90 bp TGTCCAAATCTTATGAGGAGAGGTCACCTTCTATTTAGCCTACTGATGACTCTGGCTCATCCCATTCGATaGACTCCAAAGGTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: CPNLMRRGHLLFSLLMTLAHPIR*TPKVRR
Trigger: TCTTCTGACCTTTGGAGTTCATCGAATGGGATGAGC...CAGAGTCATCAGTAGGCTAAATAGAAGGTGACCTCTCCTCATAAGATTTGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp TGTCCAAATCTTATGAGGAGAGGTCACCTTCTATTTAGCCTACTGATGACTCTGACTCAAGCGGTCATGTaGATGAAGGCTGCCATAACT +
Preference number: 4 (lower is better)
Translates to: CPNLMRRGHLLFSLLMTLTQAVM*MKAAIT
Trigger: AGTTATGGCAGCCTTCATTCACATGACCGCTTGAGT...CAGAGTCATCAGTAGGCTAAATAGAAGGTGACCTCTCCTCATAAGATTTGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp GAATTTCAAAATCCATCAAAAGATGTGATTTGTCAAGATCCTGAGAGGACTCAGGGTACCTGTGAGAGGTaGAGGAGATCCCACTGGTGT +
Preference number: 4 (lower is better)
Translates to: EFQNPSKDVICQDPERTQGTCER*RRSHWC
Trigger: ACACCAGTGGGATCTCCTTCACCTCTCACAGGTACC...CTGAGTCCTCTCAGGATCTTGACAAATCACATCTTTTGATGGATTTTGAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183404.8
CDS-3UTR TCA 90 bp TACTCCATAGGAACTACATGGTATGCTAGAACCTACTATGCTCTTAAAATGCTAGGTACCTGTGAGAGGTaGAGGAGATCCCACTGGTGT +
Preference number: 4 (lower is better)
Translates to: YSIGTTWYARTYYALKMLGTCER*RRSHWC
Trigger: ACACCAGTGGGATCTCCTTCACCTCTCACAGGTACC...TAGCATTTTAAGAGCATAGTAGGTTCTAGCATACCATGTAGTTCCTATGGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
CDS-3UTR TCA 90 bp TTTTTCCTATTTCATGGAAATCACTATTCATATGGCGAAGGTCGGAGAGGGCAAGCCATTGAGACTGACTaGATCTTCCCGATGTGTTCC +
Preference number: 4 (lower is better)
Translates to: FFLFHGNHYSYGEGRRGQAIETD*IFPMCS
Trigger: GGAACACATCGGGAAGATTCAGTCAGTCTCAATGGC...TTGCCCTCTCCGACCTTCGCCATATGAATAGTGATTTCCATGAAATAGGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp GCTTTAACAATGCTGGCATCAGCTGAGTGTACATCAGCTTCCCACATGAACTTTGTTCAGTTCTGTGTTTaGGGCAGCAACAGTACTAGA +
Preference number: 4 (lower is better)
Translates to: ALTMLASAECTSASHMNFVQFCV*GSNSTR
Trigger: TCTAGTACTGTTGCTGCCTCAAACACAGAACTGAAC...AAAGTTCATGTGGGAAGCTGATGTACACTCAGCTGATGCCAGCATTGTTAAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp TCTTCTGTGCAGACTGCCACTGCTATTGGCTTTAAGGAGTTACTTAGCCAAGACTTTCAGGGAGTGAAGTaGGTTTTCATAGCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: SSVQTATAIGFKELLSQDFQGVK*VFIAWR
Trigger: TCTCCAAGCTATGAAAACTCACTTCACTCCCTGAAA...GTCTTGGCTAAGTAACTCCTTAAAGCCAATAGCAGTGGCAGTCTGCACAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000183404.8
ENSMUST00000183918.8
CDS-3UTR GCA 90 bp TTTTTCCTATTTCATGGAAATCACTATTCATATGGCGAAGGTCGGAGAGGGCAATCTCTTAAGGCAGGCTaGTTTGGGGTTGAGGTTCCT +
Preference number: 4 (lower is better)
Translates to: FFLFHGNHYSYGEGRRGQSLKAG*FGVEVP
Trigger: AGGAACCTCAACCCCAAAGCAGCCTGCCTTAAGAGA...TTGCCCTCTCCGACCTTCGCCATATGAATAGTGATTTCCATGAAATAGGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp CTTTCTTCGCTTGTAAAGGATCTAGGGCTACAGAATCATGGAGCGGTCTTCTTCACTTCCCAGTGTTGTTaGTCTCGTTTTCCCACTATT +
Preference number: 4 (lower is better)
Translates to: LSSLVKDLGLQNHGAVFFTSQCC*SRFPTI
Trigger: AATAGTGGGAAAACGAGACCAACAACACTGGGAAGT...GAAGAAGACCGCTCCATGATTCTGTAGCCCTAGATCCTTTACAAGCGAAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000183594.2
ENSMUST00000184107.8
CDS-3UTR CCA 90 bp TTCTTCGCTTGTAAAGGATCTAGGGCTACAGAATCATGGAGCGGTCTTCTTCTCACTTCCCAGTGTTGTTaGTCTCGTTTTCCCACTATT +
Preference number: 4 (lower is better)
Translates to: FFACKGSRATESWSGLLLTSQCC*SRFPTI
Trigger: AATAGTGGGAAAACGAGACCAACAACACTGGGAAGT...GAGAAGAAGACCGCTCCATGATTCTGTAGCCCTAGATCCTTTACAAGCGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000183594.2
ENSMUST00000184107.8
CDS-3UTR CCA 90 bp GTGTTCACCAGAGTCCTGATGGAGGATCTGAAGTGCTGTCTTCATGGTTTTTGTACTTCCCAGTGTTGTTaGTCTCGTTTTCCCACTATT +
Preference number: 4 (lower is better)
Translates to: VFTRVLMEDLKCCLHGFCTSQCC*SRFPTI
Trigger: AATAGTGGGAAAACGAGACCAACAACACTGGGAAGT...ACAAAAACCATGAAGACAGCACTTCAGATCCTCCATCAGGACTCTGGTGAACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184867.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp TCATATGGCGAAGGTCGGAGAGGGCAACAAAGGACTCCCTTCCTTTTTAAGACATTCTTCTCGAACTTGTaGCAGAGAATGAGTAGTATG +
Preference number: 4 (lower is better)
Translates to: SYGEGRRGQQRTPFLFKTFFSNL*QRMSSM
Trigger: CATACTACTCATTCTCTGCCACAAGTTCGAGAAGAA...TGTCTTAAAAAGGAAGGGAGTCCTTTGTTGCCCTCTCCGACCTTCGCCATATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp ACGTTGAGTGGAGAGATGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGATTTCTTCTCGAACTTGTaGCAGAGAATGAGTAGTATG +
Preference number: 4 (lower is better)
Translates to: TLSGEMRQSLIVQKRHTDFFSNL*QRMSSM
Trigger: CATACTACTCATTCTCTGCCACAAGTTCGAGAAGAA...ATCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCATCTCTCCACTCAACGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp AGTTACAGAACGACTTGGGATTTTTCTTCTGTGCAGACTGCCACTGCTATTGGCGTCAGAATTTGGGGATaGTGCATATACAGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: SYRTTWDFSSVQTATAIGVRIWG*CIYRRR
Trigger: CCTTCTTCTGTATATGCACCATCCCCAAATTCTGAC...GCCAATAGCAGTGGCAGTCTGCACAGAAGAAAAATCCCAAGTCGTTCTGTAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp AAGGACATGAACAAAGCATACAGGACTGCAAGGAGGGTTCTGGACTGTGACCATGAAATCGTCAGAATTTaGGGATGGTGCATATACAGA +
Preference number: 4 (lower is better)
Translates to: KDMNKAYRTARRVLDCDHEIVRI*GWCIYR
Trigger: TCTGTATATGCACCATCCCCAAATTCTGACGATTTC...ATGGTCACAGTCCAGAACCCTCCTTGCAGTCCTGTATGCTTTGTTCATGTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp ACGTTGAGTGGAGAGATGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGATGAAATCGTCAGAATTTaGGGATGGTGCATATACAGA +
Preference number: 4 (lower is better)
Translates to: TLSGEMRQSLIVQKRHTDEIVRI*GWCIYR
Trigger: TCTGTATATGCACCATCCCCAAATTCTGACGATTTC...ATCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCATCTCTCCACTCAACGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp TTTTTCCTATTTCATGGAAATCACTATTCATATGGCGAAGGTCGGAGAGGGCAAGGCTGCCATAACTACTaGACTGAGACATGTGGGATG +
Preference number: 4 (lower is better)
Translates to: FFLFHGNHYSYGEGRRGQGCHNY*TETCGM
Trigger: CATCCCACATGTCTCAGTCCAGTAGTTATGGCAGCC...TTGCCCTCTCCGACCTTCGCCATATGAATAGTGATTTCCATGAAATAGGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp TTAAGGAGTTACTTAGCCAAGACCATCACGCTTAGCATGTTTTTCTCTCCCAGGGTGGAAGCTGGACATTaGCGGAAGACTTGTGTTTAT +
Preference number: 4 (lower is better)
Translates to: LRSYLAKTITLSMFFSPRVEAGH*RKTCVY
Trigger: ATAAACACAAGTCTTCCGCCAATGTCCAGCTTCCAC...CCTGGGAGAGAAAAACATGCTAAGCGTGATGGTCTTGGCTAAGTAACTCCTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp CATTTGTCAATTCAGTTTAGGCACAAGGCAACTTCCACGTTGAGTGGAGAGATGGTGGAAGCTGGACATTaGCGGAAGACTTGTGTTTAT +
Preference number: 4 (lower is better)
Translates to: HLSIQFRHKATSTLSGEMVEAGH*RKTCVY
Trigger: ATAAACACAAGTCTTCCGCCAATGTCCAGCTTCCAC...CATCTCTCCACTCAACGTGGAAGTTGCCTTGTGCCTAAACTGAATTGACAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp CCACAGATAGAGTCTGATCTAACTGGAGAACATATACAAATTAAGTCCACTAAGCTGGTACTACCACGGTaGAAGCTGGACATTGGCGGA +
Preference number: 4 (lower is better)
Translates to: PQIESDLTGEHIQIKSTKLVLPR*KLDIGG
Trigger: TCCGCCAATGTCCAGCTTCCACCGTGGTAGTACCAG...CTTAGTGGACTTAATTTGTATATGTTCTCCAGTTAGATCAGACTCTATCTGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp CACGGACCAGCCAACTCAAAGGACAGAAGTAAAGCTAGGGTAAGGAACCGTGACTTTTCTGGTGTTTTATaGTTCAGTTCTGTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: HGPANSKDRSKARVRNRDFSGVL*FSSVFE
Trigger: CTCAAACACAGAACTGAACCATAAAACACCAGAAAA...GTCACGGTTCCTTACCCTAGCTTTACTTCTGTCCTTTGAGTTGGCTGGTCCGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp TTTTTCCTATTTCATGGAAATCACTATTCATATGGCGAAGGTCGGAGAGGGCAAGATCCTCGTCTTCATTaGTACTGCTTGTTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: FFLFHGNHYSYGEGRRGQDPRLH*YCLFCP
Trigger: GGGGCAGAACAAGCAGTACCAATGAAGACGAGGATC...TTGCCCTCTCCGACCTTCGCCATATGAATAGTGATTTCCATGAAATAGGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp CATTTGTCAATTCAGTTTAGGCACAAGGCAACTTCCACGTTGAGTGGAGAGATGGTCAGAATTTGGGGATaGTGCATATACCGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: HLSIQFRHKATSTLSGEMVRIWG*CIYRFP
Trigger: GGGAAAACGGTATATGCACCATCCCCAAATTCTGAC...CATCTCTCCACTCAACGTGGAAGTTGCCTTGTGCCTAAACTGAATTGACAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183918.8
CDS-3UTR TCA 90 bp TACTCCATAGGAACTACATGGTATGCTAGAACCTACTATGCTCTTAAAATGCTAACTAGACTGACAGCCTaGGAGTCCAGAGTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: YSIGTTWYARTYYALKMLTRLTA*ESRVSA
Trigger: AGCAGAGACTCTGGACTCTCAGGCTGTCAGTCTAGT...TAGCATTTTAAGAGCATAGTAGGTTCTAGCATACCATGTAGTTCCTATGGAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
CDS-3UTR TCA 90 bp TTTTTCCTATTTCATGGAAATCACTATTCATATGGCGAAGGTCGGAGAGGGCAAACTCAAGCGGTCATGTaGATGAAGGCTGCCATAACT +
Preference number: 4 (lower is better)
Translates to: FFLFHGNHYSYGEGRRGQTQAVM*MKAAIT
Trigger: AGTTATGGCAGCCTTCATTCACATGACCGCTTGAGT...TTGCCCTCTCCGACCTTCGCCATATGAATAGTGATTTCCATGAAATAGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp TTTTTCCTATTTCATGGAAATCACTATTCATATGGCGAAGGTCGGAGAGGGCAATGCTATCTGATCCATTaGTGGGAGGAGTATGTGAGG +
Preference number: 4 (lower is better)
Translates to: FFLFHGNHYSYGEGRRGQCYLIH*WEEYVR
Trigger: CCTCACATACTCCTCCCATCAATGGATCAGATAGCA...TTGCCCTCTCCGACCTTCGCCATATGAATAGTGATTTCCATGAAATAGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp GAATTTCAAAATCCATCAAAAGATGTGATTTGTCAAGATCCTGAGAGGACTCAGACTGACTGGTACCTGTaGGAGGTGAAGGAGATCCCA +
Preference number: 4 (lower is better)
Translates to: EFQNPSKDVICQDPERTQTDWYL*EVKEIP
Trigger: TGGGATCTCCTTCACCTCTCACAGGTACCAGTCAGT...CTGAGTCCTCTCAGGATCTTGACAAATCACATCTTTTGATGGATTTTGAAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183404.8
CDS-3UTR TCA 90 bp AAATCACTATTCATATGGCGAAGGTCGGAGAGGGCAACAAAGGACTCCCTTCCTCTCCATAGTTTGAATTaGGGTTTCCAATTGATGCAT +
Preference number: 4 (lower is better)
Translates to: KSLFIWRRSERATKDSLPLHSLN*GFQLMH
Trigger: ATGCATCAATTGGAAACCTCAATTCAAACTATGGAG...AGGAAGGGAGTCCTTTGTTGCCCTCTCCGACCTTCGCCATATGAATAGTGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp TCATATGGCGAAGGTCGGAGAGGGCAACAAAGGACTCCCTTCCTTTTTAAGACACTCCATAGTTTGAATTaGGGTTTCCAATTGATGCAT +
Preference number: 4 (lower is better)
Translates to: SYGEGRRGQQRTPFLFKTLHSLN*GFQLMH
Trigger: ATGCATCAATTGGAAACCTCAATTCAAACTATGGAG...TGTCTTAAAAAGGAAGGGAGTCCTTTGTTGCCCTCTCCGACCTTCGCCATATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp TCATATGGCGAAGGTCGGAGAGGGCAACAAAGGACTCCCTTCCTTTTTAAGACACTTTGTTTTCAGTCTTaGTTTCTGTTGGAACAACAC +
Preference number: 4 (lower is better)
Translates to: SYGEGRRGQQRTPFLFKTLCFQS*FLLEQH
Trigger: GTGTTGTTCCAACAGAAATCAAGACTGAAAACAAAG...TGTCTTAAAAAGGAAGGGAGTCCTTTGTTGCCCTCTCCGACCTTCGCCATATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp TTCAAGGACATGAACAAAGCATACAGGACTGCAAGGAGGGTTCTGGACTGTGACCTTTGTTTTCAGTCTTaGTTTCTGTTGGAACAACAC +
Preference number: 4 (lower is better)
Translates to: FKDMNKAYRTARRVLDCDLCFQS*FLLEQH
Trigger: GTGTTGTTCCAACAGAAATCAAGACTGAAAACAAAG...GTCACAGTCCAGAACCCTCCTTGCAGTCCTGTATGCTTTGTTCATGTCCTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp GCTTTAACAATGCTGGCATCAGCTGAGTGTACATCAGCTTCCCACATGAACTTTTTTCAGGGAGTGAAGTaGGTTTTCATAGCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: ALTMLASAECTSASHMNFFQGVK*VFIAWR
Trigger: TCTCCAAGCTATGAAAACTCACTTCACTCCCTGAAA...AAAGTTCATGTGGGAAGCTGATGTACACTCAGCTGATGCCAGCATTGTTAAAGC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
CDS-3UTR TCA 90 bp GAAACCCTTTATGTAACAACGGACCCTCTTCCACATACACACTTCCCACAACACTTAAAAAGCACTGCCTaGATTTGTGCACAGATACTC +
Preference number: 4 (lower is better)
Translates to: ETLYVTTDPLPHTHFPQHLKSTA*ICAQIL
Trigger: GAGTATCTGTGCACAAATTCAGGCAGTGCTTTTTAA...GTGTTGTGGGAAGTGTGTATGTGGAAGAGGGTCCGTTGTTACATAAAGGGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184029.2
CDS-3UTR GCA 90 bp TGTCCAAATCTTATGAGGAGAGGTCACCTTCTATTTAGCCTACTGATGACTCTGCATGTGAATGAAGGCTaGCATAACTACTGGACTGAG +
Preference number: 4 (lower is better)
Translates to: CPNLMRRGHLLFSLLMTLHVNEG*HNYWTE
Trigger: CTCAGTCCAGTAGTTATGGCAGCCTTCATTCACATG...CAGAGTCATCAGTAGGCTAAATAGAAGGTGACCTCTCCTCATAAGATTTGGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR GCA 90 bp GCTTTAACAATGCTGGCATCAGCTGAGTGTACATCAGCTTCCCACATGAACTTTTTCCTCTCTCTCACTTaGTGTTCTAGACTAAGGATG +
Preference number: 4 (lower is better)
Translates to: ALTMLASAECTSASHMNFFLSLT*CSRLRM
Trigger: CATCCTTAGTCTAGAACAGCAAGTGAGAGAGAGGAA...AAAGTTCATGTGGGAAGCTGATGTACACTCAGCTGATGCCAGCATTGTTAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp CTACAATGCAAGTTCAGGGCAGTCAGGGAGACAGACAGAAGCTCTGTTTTGAAAGAAATCGTCAGAATTTaGGGATGGTGCATATACAGA +
Preference number: 4 (lower is better)
Translates to: LQCKFRAVRETDRSSVLKEIVRI*GWCIYR
Trigger: TCTGTATATGCACCATCCCCAAATTCTGACGATTTC...TTTCAAAACAGAGCTTCTGTCTGTCTCCCTGACTGCCCTGAACTTGCATTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183404.8
CDS-3UTR CCA 90 bp GAAACCCTTTATGTAACAACGGACCCTCTTCCACATACACACTTCCCACAACACGAAATCGTCAGAATTTaGGGATGGTGCATATACAGA +
Preference number: 4 (lower is better)
Translates to: ETLYVTTDPLPHTHFPQHEIVRI*GWCIYR
Trigger: TCTGTATATGCACCATCCCCAAATTCTGACGATTTC...GTGTTGTGGGAAGTGTGTATGTGGAAGAGGGTCCGTTGTTACATAAAGGGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184029.2
CDS-3UTR CCA 90 bp TGTCCAAATCTTATGAGGAGAGGTCACCTTCTATTTAGCCTACTGATGACTCTGGTGGAAGCTGGACATTaGCGGAAGACTTGTGTTTAT +
Preference number: 4 (lower is better)
Translates to: CPNLMRRGHLLFSLLMTLVEAGH*RKTCVY
Trigger: ATAAACACAAGTCTTCCGCCAATGTCCAGCTTCCAC...CAGAGTCATCAGTAGGCTAAATAGAAGGTGACCTCTCCTCATAAGATTTGGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp CATTTGTCAATTCAGTTTAGGCACAAGGCAACTTCCACGTTGAGTGGAGAGATGACCTTGATGTCTTTCTaGGAGGACTCATCATCTGAT +
Preference number: 4 (lower is better)
Translates to: HLSIQFRHKATSTLSGEMTLMSF*EDSSSD
Trigger: ATCAGATGATGAGTCCTCCCAGAAAGACATCAAGGT...CATCTCTCCACTCAACGTGGAAGTTGCCTTGTGCCTAAACTGAATTGACAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
3UTR CAA 72 bp TCAAAATTCTCCGGTGTCTCTAAGTTACAGAACGACTaGGGATTTTTCTTCTGTGCAGACTGCCACTGCTAT +
Preference number: 4 (lower is better)
Translates to: SKFSGVSKLQND*GFFFCADCHCY
Trigger: ATAGCAGTGGCAGTCTGCACAGAAGAAAAATCCCAAGTCGTTCTGTAACTTAGAGACACCGGAGAATTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184867.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp TACTCCATAGGAACTACATGGTATGCTAGAACCTACTATGCTCTTAAAATGCTAGCCATTGAGACTGACTaGATCTTCCCGATGTGTTCC +
Preference number: 4 (lower is better)
Translates to: YSIGTTWYARTYYALKMLAIETD*IFPMCS
Trigger: GGAACACATCGGGAAGATTCAGTCAGTCTCAATGGC...TAGCATTTTAAGAGCATAGTAGGTTCTAGCATACCATGTAGTTCCTATGGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
CDS-3UTR GCA 90 bp CCACAGATAGAGTCTGATCTAACTGGAGAACATATACAAATTAAGTCCACTAAGTCTCTTAAGGCAGGCTaGTTTGGGGTTGAGGTTCCT +
Preference number: 4 (lower is better)
Translates to: PQIESDLTGEHIQIKSTKSLKAG*FGVEVP
Trigger: AGGAACCTCAACCCCAAAGCAGCCTGCCTTAAGAGA...CTTAGTGGACTTAATTTGTATATGTTCTCCAGTTAGATCAGACTCTATCTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR GCA 90 bp TTAAGGAGTTACTTAGCCAAGACCATCACGCTTAGCATGTTTTTCTCTCCCAGGAGAATTTGGGGATGGTaGATATACCGTTTTCCCATT +
Preference number: 4 (lower is better)
Translates to: LRSYLAKTITLSMFFSPRRIWGW*IYRFPI
Trigger: AATGGGAAAACGGTATATGCACCATCCCCAAATTCT...CCTGGGAGAGAAAAACATGCTAAGCGTGATGGTCTTGGCTAAGTAACTCCTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000183918.8
CDS-3UTR CCA 90 bp CTTGTAAGTTACACTTCTTGCTATTATAGCTTTACTATGAAACCTAGAAGCCTGGGGGACAAGCCTTCGTaGGTTCCTAATCGACTGTCA +
Preference number: 4 (lower is better)
Translates to: LVSYTSCYYSFTMKPRSLGDKPS*VPNRLS
Trigger: TGACAGTCGATTAGGAACCCACGAAGGCTTGTCCCC...CAGGCTTCTAGGTTTCATAGTAAAGCTATAATAGCAAGAAGTGTAACTTACAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp TACTTATCAGCTAACACTTTACAAGTACTATATTGTGTAGTACTTACTGCTCGGGGGGACAAGCCTTCGTaGGTTCCTAATCGACTGTCA +
Preference number: 4 (lower is better)
Translates to: YLSANTLQVLYCVVLTARGDKPS*VPNRLS
Trigger: TGACAGTCGATTAGGAACCCACGAAGGCTTGTCCCC...CCGAGCAGTAAGTACTACACAATATAGTACTTGTAAAGTGTTAGCTGATAAGTA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp CCAACATGTCTCACTCAGTTTTCGATATTTACTCTTCCTGTTGGTAATACTATGAGCGAACATACTGGTTaGTGGCTTGGGAGATGGGTA +
Preference number: 4 (lower is better)
Translates to: PTCLTQFSIFTLPVGNTMSEHTG*WLGRWV
Trigger: TACCCATCTCCCAAGCCACCAACCAGTATGTTCGCT...CATAGTATTACCAACAGGAAGAGTAAATATCGAAAACTGAGTGAGACATGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184029.2
CDS-3UTR CCA 90 bp TACTTATCAGCTAACACTTTACAAGTACTATATTGTGTAGTACTTACTGCTCGGGAGACATGTGGGATGTaGAGGTCCCCAGAATTCCAC +
Preference number: 4 (lower is better)
Translates to: YLSANTLQVLYCVVLTARETCGM*RSPEFH
Trigger: GTGGAATTCTGGGGACCTCCACATCCCACATGTCTC...CCGAGCAGTAAGTACTACACAATATAGTACTTGTAAAGTGTTAGCTGATAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp ATAGAGTCTGATCTAACTGGAGAACATATACAAATTAAGTCCACTAAGTTCGCCCAGCAGCATTCCCTCTaGTTCCTAGGATGCTATCTG +
Preference number: 4 (lower is better)
Translates to: IESDLTGEHIQIKSTKFAQQHSL*FLGCYL
Trigger: CAGATAGCATCCTAGGAACCAGAGGGAATGCTGCTG...GGCGAACTTAGTGGACTTAATTTGTATATGTTCTCCAGTTAGATCAGACTCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp CCACAGATAGAGTCTGATCTAACTGGAGAACATATACAAATTAAGTCCACTAAGCAGCAGCATTCCCTCTaGTTCCTAGGATGCTATCTG +
Preference number: 4 (lower is better)
Translates to: PQIESDLTGEHIQIKSTKQQHSL*FLGCYL
Trigger: CAGATAGCATCCTAGGAACCAGAGGGAATGCTGCTG...CTTAGTGGACTTAATTTGTATATGTTCTCCAGTTAGATCAGACTCTATCTGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp GCCAACTCAAAGGACAGAAGTAAAGCTAGGGTAAGGAACCGTGACCATTGCTCTACCTCTGAAATTTTCTaGTGTTTTATGGTTCAGTTC +
Preference number: 4 (lower is better)
Translates to: ANSKDRSKARVRNRDHCSTSEIF*CFMVQF
Trigger: GAACTGAACCATAAAACACCAGAAAATTTCAGAGGT...AGAGCAATGGTCACGGTTCCTTACCCTAGCTTTACTTCTGTCCTTTGAGTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp TACTCCATAGGAACTACATGGTATGCTAGAACCTACTATGCTCTTAAAATGCTATGCTATCTGATCCATTaGTGGGAGGAGTATGTGAGG +
Preference number: 4 (lower is better)
Translates to: YSIGTTWYARTYYALKMLCYLIH*WEEYVR
Trigger: CCTCACATACTCCTCCCATCAATGGATCAGATAGCA...TAGCATTTTAAGAGCATAGTAGGTTCTAGCATACCATGTAGTTCCTATGGAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
CDS-3UTR TCA 90 bp ATAGAGTCTGATCTAACTGGAGAACATATACAAATTAAGTCCACTAAGTTCGCCCTGCAGGGAGTGAAGTaGGTTTTCATAGCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: IESDLTGEHIQIKSTKFALQGVK*VFIAWR
Trigger: TCTCCAAGCTATGAAAACTCACTTCACTCCCTGCAG...GGCGAACTTAGTGGACTTAATTTGTATATGTTCTCCAGTTAGATCAGACTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034755.13
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp GCTTTAACAATGCTGGCATCAGCTGAGTGTACATCAGCTTCCCACATGAACTTTCTCCATAGTTTGAATTaGGGTTTCCAATTGATGCAT +
Preference number: 4 (lower is better)
Translates to: ALTMLASAECTSASHMNFLHSLN*GFQLMH
Trigger: ATGCATCAATTGGAAACCTCAATTCAAACTATGGAG...AAAGTTCATGTGGGAAGCTGATGTACACTCAGCTGATGCCAGCATTGTTAAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp TTAAGGAGTTACTTAGCCAAGACCATCACGCTTAGCATGTTTTTCTCTCCCAGGCTTTGTTTTCAGTCTTaGTTTCTGTTGGAACAACAC +
Preference number: 4 (lower is better)
Translates to: LRSYLAKTITLSMFFSPRLCFQS*FLLEQH
Trigger: GTGTTGTTCCAACAGAAATCAAGACTGAAAACAAAG...CCTGGGAGAGAAAAACATGCTAAGCGTGATGGTCTTGGCTAAGTAACTCCTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR GCA 90 bp CCACAGATAGAGTCTGATCTAACTGGAGAACATATACAAATTAAGTCCACTAAGAGAGTCCAGAGTCTCTaGTGTACAGGGAAAATGAGC +
Preference number: 4 (lower is better)
Translates to: PQIESDLTGEHIQIKSTKRVQSL*CTGKMS
Trigger: GCTCATTTTCCCTGTACAGCAGAGACTCTGGACTCT...CTTAGTGGACTTAATTTGTATATGTTCTCCAGTTAGATCAGACTCTATCTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000185117.8
CDS-3UTR GCA 90 bp CTTGTAAGTTACACTTCTTGCTATTATAGCTTTACTATGAAACCTAGAAGCCTGTCTCTTAAGGCAGGCTaGTTTGGGGTTGAGGTTCCT +
Preference number: 4 (lower is better)
Translates to: LVSYTSCYYSFTMKPRSLSLKAG*FGVEVP
Trigger: AGGAACCTCAACCCCAAAGCAGCCTGCCTTAAGAGA...CAGGCTTCTAGGTTTCATAGTAAAGCTATAATAGCAAGAAGTGTAACTTACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp TGTCCAAATCTTATGAGGAGAGGTCACCTTCTATTTAGCCTACTGATGACTCTGTTCTTCTCGAACTTGTaGCAGAGAATGAGTAGTATG +
Preference number: 4 (lower is better)
Translates to: CPNLMRRGHLLFSLLMTLFFSNL*QRMSSM
Trigger: CATACTACTCATTCTCTGCCACAAGTTCGAGAAGAA...CAGAGTCATCAGTAGGCTAAATAGAAGGTGACCTCTCCTCATAAGATTTGGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp GAACTGGTATCCAAACCAGAAACCAGTATTGCTTCTAGCTTTTGTCATTTAACAGAACATACTGGTTGGTaGCTTGGGAGATGGGTAACT +
Preference number: 4 (lower is better)
Translates to: ELVSKPETSIASSFCHLTEHTGW*LGRWVT
Trigger: AGTTACCCATCTCCCAAGCCACCAACCAGTATGTTC...TGTTAAATGACAAAAGCTAGAAGCAATACTGGTTTCTGGTTTGGATACCAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184029.2
CDS-3UTR CCA 90 bp CTTGTAAGTTACACTTCTTGCTATTATAGCTTTACTATGAAACCTAGAAGCCTGGGCTGCCATAACTACTaGACTGAGACATGTGGGATG +
Preference number: 4 (lower is better)
Translates to: LVSYTSCYYSFTMKPRSLGCHNY*TETCGM
Trigger: CATCCCACATGTCTCAGTCCAGTAGTTATGGCAGCC...CAGGCTTCTAGGTTTCATAGTAAAGCTATAATAGCAAGAAGTGTAACTTACAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp TTCCTTAGAAGCTACACAGAGGGAAGAGAATTGAAGGCAGGTAGGGCTTGTAGAACCTCTGAAATTTTCTaGTGTTTTATGGTTCAGTTC +
Preference number: 4 (lower is better)
Translates to: FLRSYTEGRELKAGRACRTSEIF*CFMVQF
Trigger: GAACTGAACCATAAAACACCAGAAAATTTCAGAGGT...TCTACAAGCCCTACCTGCCTTCAATTCTCTTCCCTCTGTGTAGCTTCTAAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183404.8
CDS-3UTR CCA 90 bp TTTTTCCTATTTCATGGAAATCACTATTCATATGGCGAAGGTCGGAGAGGGCAAACCTTGATGTCTTTCTaGGAGGACTCATCATCTGAT +
Preference number: 4 (lower is better)
Translates to: FFLFHGNHYSYGEGRRGQTLMSF*EDSSSD
Trigger: ATCAGATGATGAGTCCTCCCAGAAAGACATCAAGGT...TTGCCCTCTCCGACCTTCGCCATATGAATAGTGATTTCCATGAAATAGGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp TTTTTCCTATTTCATGGAAATCACTATTCATATGGCGAAGGTCGGAGAGGGCAAGAAATCGTCAGAATTTaGGGATGGTGCATATACCGT +
Preference number: 4 (lower is better)
Translates to: FFLFHGNHYSYGEGRRGQEIVRI*GWCIYR
Trigger: ACGGTATATGCACCATCCCCAAATTCTGACGATTTC...TTGCCCTCTCCGACCTTCGCCATATGAATAGTGATTTCCATGAAATAGGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000183918.8
CDS-3UTR GCA 90 bp ATAGAGTCTGATCTAACTGGAGAACATATACAAATTAAGTCCACTAAGTTCGCCCATGTGAATGAAGGCTaGCATAACTACTGGACTGAG +
Preference number: 4 (lower is better)
Translates to: IESDLTGEHIQIKSTKFAHVNEG*HNYWTE
Trigger: CTCAGTCCAGTAGTTATGGCAGCCTTCATTCACATG...GGCGAACTTAGTGGACTTAATTTGTATATGTTCTCCAGTTAGATCAGACTCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR GCA 90 bp CCACAGATAGAGTCTGATCTAACTGGAGAACATATACAAATTAAGTCCACTAAGCATGTGAATGAAGGCTaGCATAACTACTGGACTGAG +
Preference number: 4 (lower is better)
Translates to: PQIESDLTGEHIQIKSTKHVNEG*HNYWTE
Trigger: CTCAGTCCAGTAGTTATGGCAGCCTTCATTCACATG...CTTAGTGGACTTAATTTGTATATGTTCTCCAGTTAGATCAGACTCTATCTGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp TTTTTCCTATTTCATGGAAATCACTATTCATATGGCGAAGGTCGGAGAGGGCAATTCTTCTCGAACTTGTaGCAGAGAATGAGTAGTATG +
Preference number: 4 (lower is better)
Translates to: FFLFHGNHYSYGEGRRGQFFSNL*QRMSSM
Trigger: CATACTACTCATTCTCTGCCACAAGTTCGAGAAGAA...TTGCCCTCTCCGACCTTCGCCATATGAATAGTGATTTCCATGAAATAGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp GAGTACTTACTATGTGATAGGGACCATTGTAAGAGCTTTCCATATATTGTTTCAGAACATACTGGTTGGTaGCTTGGGAGATGGGTAACT +
Preference number: 4 (lower is better)
Translates to: EYLLCDRDHCKSFPYIVSEHTGW*LGRWVT
Trigger: AGTTACCCATCTCCCAAGCCACCAACCAGTATGTTC...TGAAACAATATATGGAAAGCTCTTACAATGGTCCCTATCACATAGTAAGTACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183404.8
CDS-3UTR CCA 90 bp ATAGAGTCTGATCTAACTGGAGAACATATACAAATTAAGTCCACTAAGTTCGCCAGGTCAGAAGAACTGTaGGTCCCATCTTGCATAAAG +
Preference number: 4 (lower is better)
Translates to: IESDLTGEHIQIKSTKFARSEEL*VPSCIK
Trigger: CTTTATGCAAGATGGGACCCACAGTTCTTCTGACCT...GGCGAACTTAGTGGACTTAATTTGTATATGTTCTCCAGTTAGATCAGACTCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp TTAAGGAGTTACTTAGCCAAGACCATCACGCTTAGCATGTTTTTCTCTCCCAGGTTTTCTGGTGTTTTATaGTTCAGTTCTGTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: LRSYLAKTITLSMFFSPRFSGVL*FSSVFE
Trigger: CTCAAACACAGAACTGAACCATAAAACACCAGAAAA...CCTGGGAGAGAAAAACATGCTAAGCGTGATGGTCTTGGCTAAGTAACTCCTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp GTCCCGGAGACTCACCAGGAAAAGTCATCTTTGTATTGTACTGAATGCATTCTGTTTTCTGGTGTTTTATaGTTCAGTTCTGTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: VPETHQEKSSLYCTECILFSGVL*FSSVFE
Trigger: CTCAAACACAGAACTGAACCATAAAACACCAGAAAA...CAGAATGCATTCAGTACAATACAAAGATGACTTTTCCTGGTGAGTCTCCGGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp GCTTTAACAATGCTGGCATCAGCTGAGTGTACATCAGCTTCCCACATGAACTTTACCTCTGAAATTTTCTaGTGTTTTATGGTTCAGTTC +
Preference number: 4 (lower is better)
Translates to: ALTMLASAECTSASHMNFTSEIF*CFMVQF
Trigger: GAACTGAACCATAAAACACCAGAAAATTTCAGAGGT...AAAGTTCATGTGGGAAGCTGATGTACACTCAGCTGATGCCAGCATTGTTAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp CCACAGATAGAGTCTGATCTAACTGGAGAACATATACAAATTAAGTCCACTAAGATTGAGGTTTCCAATTaGTGCATTATGGGATGGTCC +
Preference number: 4 (lower is better)
Translates to: PQIESDLTGEHIQIKSTKIEVSN*CIMGWS
Trigger: GGACCATCCCATAATGCATCAATTGGAAACCTCAAT...CTTAGTGGACTTAATTTGTATATGTTCTCCAGTTAGATCAGACTCTATCTGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp TTTTTCCTATTTCATGGAAATCACTATTCATATGGCGAAGGTCGGAGAGGGCAACTTTGTTTTCAGTCTTaGTTTCTGTTGGAACAACAC +
Preference number: 4 (lower is better)
Translates to: FFLFHGNHYSYGEGRRGQLCFQS*FLLEQH
Trigger: GTGTTGTTCCAACAGAAATCAAGACTGAAAACAAAG...TTGCCCTCTCCGACCTTCGCCATATGAATAGTGATTTCCATGAAATAGGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp ATAGAGTCTGATCTAACTGGAGAACATATACAAATTAAGTCCACTAAGTTCGCCCCCACTATTAACAGGTaGAGAAAACATCGCACTGAA +
Preference number: 4 (lower is better)
Translates to: IESDLTGEHIQIKSTKFAPTINR*RKHRTE
Trigger: TTCAGTGCGATGTTTTCTCCACCTGTTAATAGTGGG...GGCGAACTTAGTGGACTTAATTTGTATATGTTCTCCAGTTAGATCAGACTCTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184867.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp CTTGTAAGTTACACTTCTTGCTATTATAGCTTTACTATGAAACCTAGAAGCCTGAGGTCAGAAGAACTGTaGGTCCCATCTTGCATAAAG +
Preference number: 4 (lower is better)
Translates to: LVSYTSCYYSFTMKPRSLRSEEL*VPSCIK
Trigger: CTTTATGCAAGATGGGACCCACAGTTCTTCTGACCT...CAGGCTTCTAGGTTTCATAGTAAAGCTATAATAGCAAGAAGTGTAACTTACAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp TACTTATCAGCTAACACTTTACAAGTACTATATTGTGTAGTACTTACTGCTCGGCCAATTGATGCATTATaGGATGGTCCCAGCAAACTG +
Preference number: 4 (lower is better)
Translates to: YLSANTLQVLYCVVLTARPIDAL*DGPSKL
Trigger: CAGTTTGCTGGGACCATCCCATAATGCATCAATTGG...CCGAGCAGTAAGTACTACACAATATAGTACTTGTAAAGTGTTAGCTGATAAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp CTTGTAAGTTACACTTCTTGCTATTATAGCTTTACTATGAAACCTAGAAGCCTGATTGAGGTTTCCAATTaGTGCATTATGGGATGGTCC +
Preference number: 4 (lower is better)
Translates to: LVSYTSCYYSFTMKPRSLIEVSN*CIMGWS
Trigger: GGACCATCCCATAATGCATCAATTGGAAACCTCAAT...CAGGCTTCTAGGTTTCATAGTAAAGCTATAATAGCAAGAAGTGTAACTTACAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR TCA 90 bp GAGTACTTACTATGTGATAGGGACCATTGTAAGAGCTTTCCATATATTGTTTCATTTCAGGGAGTGAAGTaGGTTTTCATAGCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: EYLLCDRDHCKSFPYIVSFQGVK*VFIAWR
Trigger: TCTCCAAGCTATGAAAACTCACTTCACTCCCTGAAA...TGAAACAATATATGGAAAGCTCTTACAATGGTCCCTATCACATAGTAAGTACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183404.8
CDS-3UTR GCA 90 bp TACTTATCAGCTAACACTTTACAAGTACTATATTGTGTAGTACTTACTGCTCGGTTGATGGAAAACTACTaGTTGTGTGGTCAGGGGAAT +
Preference number: 4 (lower is better)
Translates to: YLSANTLQVLYCVVLTARLMENY*LCGQGN
Trigger: ATTCCCCTGACCACACAAGCAGTAGTTTTCCATCAA...CCGAGCAGTAAGTACTACACAATATAGTACTTGTAAAGTGTTAGCTGATAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR GCA 90 bp TACTTATCAGCTAACACTTTACAAGTACTATATTGTGTAGTACTTACTGCTCGGACATCAAAGAATTGTTaGCCATTCCAGGGACAGGAT +
Preference number: 4 (lower is better)
Translates to: YLSANTLQVLYCVVLTARTSKNC*PFQGQD
Trigger: ATCCTGTCCCTGGAATGGGCAACAATTCTTTGATGT...CCGAGCAGTAAGTACTACACAATATAGTACTTGTAAAGTGTTAGCTGATAAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183918.8
CDS-3UTR CCA 90 bp TACTTATCAGCTAACACTTTACAAGTACTATATTGTGTAGTACTTACTGCTCGGCCCACTATTAACAGGTaGAGAAAACATCGCACTGAA +
Preference number: 4 (lower is better)
Translates to: YLSANTLQVLYCVVLTARPTINR*RKHRTE
Trigger: TTCAGTGCGATGTTTTCTCCACCTGTTAATAGTGGG...CCGAGCAGTAAGTACTACACAATATAGTACTTGTAAAGTGTTAGCTGATAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp CTTGTAAGTTACACTTCTTGCTATTATAGCTTTACTATGAAACCTAGAAGCCTGACTTCCCAGTGTTGTTaGTCTCGTTTTCCCACTATT +
Preference number: 4 (lower is better)
Translates to: LVSYTSCYYSFTMKPRSLTSQCC*SRFPTI
Trigger: AATAGTGGGAAAACGAGACCAACAACACTGGGAAGT...CAGGCTTCTAGGTTTCATAGTAAAGCTATAATAGCAAGAAGTGTAACTTACAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp GAGTACTTACTATGTGATAGGGACCATTGTAAGAGCTTTCCATATATTGTTTCAGTCAGAATTTGGGGATaGTGCATATACAGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: EYLLCDRDHCKSFPYIVSVRIWG*CIYRRR
Trigger: CCTTCTTCTGTATATGCACCATCCCCAAATTCTGAC...TGAAACAATATATGGAAAGCTCTTACAATGGTCCCTATCACATAGTAAGTACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183404.8
CDS-3UTR CCA 90 bp CAACATGTCTCACTCAGTTTTCGATATTTACTCTTCCTGTTGGTAATACTATGTGTCAGAATTTGGGGATaGTGCATATACAGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: QHVSLSFRYLLFLLVILCVRIWG*CIYRRR
Trigger: CCTTCTTCTGTATATGCACCATCCCCAAATTCTGAC...ACATAGTATTACCAACAGGAAGAGTAAATATCGAAAACTGAGTGAGACATGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184029.2
CDS-3UTR CCA 90 bp TTTTTCCTATTTCATGGAAATCACTATTCATATGGCGAAGGTCGGAGAGGGCAATTTTCTGGTGTTTTATaGTTCAGTTCTGTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: FFLFHGNHYSYGEGRRGQFSGVL*FSSVFE
Trigger: CTCAAACACAGAACTGAACCATAAAACACCAGAAAA...TTGCCCTCTCCGACCTTCGCCATATGAATAGTGATTTCCATGAAATAGGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
3UTR CAA 72 bp CTTGATTTCTGTTGGAACAACACTTCCAGACTGATTTaGTACACCACCTCTGAAATTTTCTGGTGTTTTATG +
Preference number: 4 (lower is better)
Translates to: LDFCWNNTSRLI*YTTSEIFWCFM
Trigger: CATAAAACACCAGAAAATTTCAGAGGTGGTGTACAAAATCAGTCTGGAAGTGTTGTTCCAACAGAAATCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184867.8
CDS-3UTR TCA 90 bp ATAGAGTCTGATCTAACTGGAGAACATATACAAATTAAGTCCACTAAGTTCGCCCTCCATAGTTTGAATTaGGGTTTCCAATTGATGCAT +
Preference number: 4 (lower is better)
Translates to: IESDLTGEHIQIKSTKFALHSLN*GFQLMH
Trigger: ATGCATCAATTGGAAACCTCAATTCAAACTATGGAG...GGCGAACTTAGTGGACTTAATTTGTATATGTTCTCCAGTTAGATCAGACTCTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp CTTGTAAGTTACACTTCTTGCTATTATAGCTTTACTATGAAACCTAGAAGCCTGGAAATCGTCAGAATTTaGGGATGGTGCATATACAGA +
Preference number: 4 (lower is better)
Translates to: LVSYTSCYYSFTMKPRSLEIVRI*GWCIYR
Trigger: TCTGTATATGCACCATCCCCAAATTCTGACGATTTC...CAGGCTTCTAGGTTTCATAGTAAAGCTATAATAGCAAGAAGTGTAACTTACAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CCA 90 bp CCACAGATAGAGTCTGATCTAACTGGAGAACATATACAAATTAAGTCCACTAAGACCTCTGAAATTTTCTaGTGTTTTATGGTTCAGTTC +
Preference number: 4 (lower is better)
Translates to: PQIESDLTGEHIQIKSTKTSEIF*CFMVQF
Trigger: GAACTGAACCATAAAACACCAGAAAATTTCAGAGGT...CTTAGTGGACTTAATTTGTATATGTTCTCCAGTTAGATCAGACTCTATCTGTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp ACACTAACAGGTATGCCGGGAATGCTAAGGGCCAATGGTTGCCACTGCTCTGTGGCTCCTGGCAACGTGTaGGGCGGCTCTGCTGACGCA +
Preference number: 5 (lower is better)
Translates to: TLTGMPGMLRANGCHCSVAPGNV*GGSADA
Trigger: TGCGTCAGCAGAGCCGCCCAACACGTTGCCAGGAGC...CACAGAGCAGTGGCAACCATTGGCCCTTAGCATTCCCGGCATACCTGTTAGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp TTCAAGGACATGAACAAAGCATACAGGACTGCAAGGAGGGTTCTGGACTGTGACAGGTCGCTCAGCTCCTaGTCGGTCCCTATCGCGGCC +
Preference number: 5 (lower is better)
Translates to: FKDMNKAYRTARRVLDCDRSLSS*SVPIAA
Trigger: GGCCGCGATAGGGACCGACAAGGAGCTGAGCGACCT...GTCACAGTCCAGAACCCTCCTTGCAGTCCTGTATGCTTTGTTCATGTCCTTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp CCCTTCCTTTTTAAGACACTAACAGGTATGCCGGGAATGCTAAGGGCCAATGGTAGGTCGCTCAGCTCCTaGTCGGTCCCTATCGCGGCC +
Preference number: 5 (lower is better)
Translates to: PFLFKTLTGMPGMLRANGRSLSS*SVPIAA
Trigger: GGCCGCGATAGGGACCGACAAGGAGCTGAGCGACCT...ACCATTGGCCCTTAGCATTCCCGGCATACCTGTTAGTGTCTTAAAAAGGAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp ACGTTGAGTGGAGAGATGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGATGCTCCTGGCAACGTGTaGGGCGGCTCTGCTGACGCA +
Preference number: 5 (lower is better)
Translates to: TLSGEMRQSLIVQKRHTDAPGNV*GGSADA
Trigger: TGCGTCAGCAGAGCCGCCCAACACGTTGCCAGGAGC...ATCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCATCTCTCCACTCAACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp AGAGGGCAACAAAGGACTCCCTTCCTTTTTAAGACACTAACAGGTATGCCGGGAGCTCCTGGCAACGTGTaGGGCGGCTCTGCTGACGCA +
Preference number: 5 (lower is better)
Translates to: RGQQRTPFLFKTLTGMPGAPGNV*GGSADA
Trigger: TGCGTCAGCAGAGCCGCCCAACACGTTGCCAGGAGC...TCCCGGCATACCTGTTAGTGTCTTAAAAAGGAAGGGAGTCCTTTGTTGCCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp TCATATGGCGAAGGTCGGAGAGGGCAACAAAGGACTCCCTTCCTTTTTAAGACAGCTCCTGGCAACGTGTaGGGCGGCTCTGCTGACGCA +
Preference number: 5 (lower is better)
Translates to: SYGEGRRGQQRTPFLFKTAPGNV*GGSADA
Trigger: TGCGTCAGCAGAGCCGCCCAACACGTTGCCAGGAGC...TGTCTTAAAAAGGAAGGGAGTCCTTTGTTGCCCTCTCCGACCTTCGCCATATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp AGTTACAGAACGACTTGGGATTTTTCTTCTGTGCAGACTGCCACTGCTATTGGCAGGTCGCTCAGCTCCTaGTCGGTCCCTATCGCGGCC +
Preference number: 5 (lower is better)
Translates to: SYRTTWDFSSVQTATAIGRSLSS*SVPIAA
Trigger: GGCCGCGATAGGGACCGACAAGGAGCTGAGCGACCT...GCCAATAGCAGTGGCAGTCTGCACAGAAGAAAAATCCCAAGTCGTTCTGTAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184867.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp GTCTTCTTCTCGAACTTGTGGCAGAGAATGAGTAGTATGGTGTTCCAGGCTTTCAGGTCGCTCAGCTCCTaGTCGGTCCCTATCGCGGCC +
Preference number: 5 (lower is better)
Translates to: VFFSNLWQRMSSMVFQAFRSLSS*SVPIAA
Trigger: GGCCGCGATAGGGACCGACAAGGAGCTGAGCGACCT...GAAAGCCTGGAACACCATACTACTCATTCTCTGCCACAAGTTCGAGAAGAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000183594.2
ENSMUST00000184107.8
CDS-3UTR CAA 90 bp ACAGAAGAAGGTAGGCCAGGAGGCACCTTTCTTACTTTCTTCGCTTGTAAAGGAAGGTCGCTCAGCTCCTaGTCGGTCCCTATCGCGGCC +
Preference number: 5 (lower is better)
Translates to: TEEGRPGGTFLTFFACKGRSLSS*SVPIAA
Trigger: GGCCGCGATAGGGACCGACAAGGAGCTGAGCGACCT...TCCTTTACAAGCGAAGAAAGTAAGAAAGGTGCCTCCTGGCCTACCTTCTTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000183594.2
ENSMUST00000184107.8
CDS-3UTR CAA 90 bp GAGAGGGCAAGAGTAGAGCTGTGCGGGGCCGGGGGTGTCATCTTAGCTTGCCCACAAATGCTCGTGAAGTaGCTGCTCAACTCGATTTTT +
Preference number: 5 (lower is better)
Translates to: ERARVELCGAGGVILACPQMLVK*LLNSIF
Trigger: AAAAATCGAGTTGAGCAGCAACTTCACGAGCATTTG...TGGGCAAGCTAAGATGACACCCCCGGCCCCGCACAGCTCTACTCTTGCCCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183404.8
CDS-3UTR CAA 90 bp TGGGAGGAGTATGTGAGGCGGCAACATATGGTGAGCTGCTGGTACTACCACGGTGACTACTTCCCAGTGTaGTTGGTCTCGTTTTCCCAC +
Preference number: 5 (lower is better)
Translates to: WEEYVRRQHMVSCWYYHGDYFPV*LVSFSH
Trigger: GTGGGAAAACGAGACCAACAACACTGGGAAGTAGTC...ACCGTGGTAGTACCAGCAGCTCACCATATGTTGCCGCCTCACATACTCCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184867.8
CDS-3UTR CAA 90 bp GTGTTCCAGGCTTTCCTGAAGAAGACAGCTGTGCCGGGCTCCCAAGTCCTAGATTTGTTCCCCAAGATGTaGTTCCTCCACGCTCATCCA +
Preference number: 5 (lower is better)
Translates to: VFQAFLKKTAVPGSQVLDLFPKM*FLHAHP
Trigger: TGGATGAGCGTGGAGGAACAACATCTTGGGGAACAA...ATCTAGGACTTGGGAGCCCGGCACAGCTGTCTTCTTCAGGAAAGCCTGGAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184107.8
CDS-3UTR CAA 90 bp ACACTAACAGGTATGCCGGGAATGCTAAGGGCCAATGGTTGCCACTGCTCTGTGAATCATAGGAGGGGCTaGGTTGACCACTTGTTCCCC +
Preference number: 5 (lower is better)
Translates to: TLTGMPGMLRANGCHCSVNHRRG*VDHLFP
Trigger: GGGGAACAAGTGGTCAACCAAGCCCCTCCTATGATT...CACAGAGCAGTGGCAACCATTGGCCCTTAGCATTCCCGGCATACCTGTTAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp GTCCCGGAGACTCACCAGGAAAAGTCATCTTTGTATTGTACTGAATGCATTCTGGCTCCTGGCAACGTGTaGGGCGGCTCTGCTGACGCA +
Preference number: 5 (lower is better)
Translates to: VPETHQEKSSLYCTECILAPGNV*GGSADA
Trigger: TGCGTCAGCAGAGCCGCCCAACACGTTGCCAGGAGC...CAGAATGCATTCAGTACAATACAAAGATGACTTTTCCTGGTGAGTCTCCGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp ACTGACAGGTACAGCTCGGTGCTAATCTGGCTCTTCTTGGGGTGGGGGCAGGTGATGGAAAACTACTGCTaGTGTGGTCAGGGGAATAAA +
Preference number: 5 (lower is better)
Translates to: TDRYSSVLIWLFLGWGQVMENYC*CGQGNK
Trigger: TTTATTCCCCTGACCACACAAGCAGTAGTTTTCCAT...CACCTGCCCCCACCCCAAGAAGAGCCAGATTAGCACCGAGCTGTACCTGTCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp TCATATGGCGAAGGTCGGAGAGGGCAACAAAGGACTCCCTTCCTTTTTAAGACAAGGCGCTCTCTGGCATaGTTAGCCATCCGCCTTTCC +
Preference number: 5 (lower is better)
Translates to: SYGEGRRGQQRTPFLFKTRRSLA*LAIRLS
Trigger: GGAAAGGCGGATGGCTAACAATGCCAGAGAGCGCCT...TGTCTTAAAAAGGAAGGGAGTCCTTTGTTGCCCTCTCCGACCTTCGCCATATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp CAGTTTAGGCACAAGGCAACTTCCACGTTGAGTGGAGAGATGAGACAGTCTCTGATAGGAGGGGCTTGGTaGACCACTTGTTCCCCAAGA +
Preference number: 5 (lower is better)
Translates to: QFRHKATSTLSGEMRQSLIGGAW*TTCSPR
Trigger: TCTTGGGGAACAAGTGGTCAACCAAGCCCCTCCTAT...CAGAGACTGTCTCATCTCTCCACTCAACGTGGAAGTTGCCTTGTGCCTAAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp GCGGTCTTCTTCTCGAACTTGTGGCAGAGAATGAGTAGTATGGTGTTCCAGGCTAATCATAGGAGGGGCTaGGTTGACCACTTGTTCCCC +
Preference number: 5 (lower is better)
Translates to: AVFFSNLWQRMSSMVFQANHRRG*VDHLFP
Trigger: GGGGAACAAGTGGTCAACCAAGCCCCTCCTATGATT...AGCCTGGAACACCATACTACTCATTCTCTGCCACAAGTTCGAGAAGAAGACCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184107.8
CDS-3UTR CAA 90 bp TCTTCTGTGCAGACTGCCACTGCTATTGGCTTTAAGGAGTTACTTAGCCAAGACAGGCGCTCTCTGGCATaGTTAGCCATCCGCCTTTCC +
Preference number: 5 (lower is better)
Translates to: SSVQTATAIGFKELLSQDRRSLA*LAIRLS
Trigger: GGAAAGGCGGATGGCTAACAATGCCAGAGAGCGCCT...GTCTTGGCTAAGTAACTCCTTAAAGCCAATAGCAGTGGCAGTCTGCACAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp GCAACATATGGTGAGCTGCTGGTACTACCACGGTGGAAGCTGGACATTGGCGGATACATCAAAGAATTGTaGCCCATTCCAGGGACAGGA +
Preference number: 5 (lower is better)
Translates to: ATYGELLVLPRWKLDIGGYIKEL*PIPGTG
Trigger: TCCTGTCCCTGGAATGGGCAACAATTCTTTGATGTA...TCCGCCAATGTCCAGCTTCCACCGTGGTAGTACCAGCAGCTCACCATATGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184378.8
CDS-3UTR CAA 90 bp GCTTTCCTGAAGAAGACAGCTGTGCCGGGCTCCCAAGTCCTAGATCTTGTCTCATACTTCCCAGTGTTGTaGGTCTCGTTTTCCCACTAT +
Preference number: 5 (lower is better)
Translates to: AFLKKTAVPGSQVLDLVSYFPVL*VSFSHY
Trigger: ATAGTGGGAAAACGAGACCAACAACACTGGGAAGTA...TGAGACAAGATCTAGGACTTGGGAGCCCGGCACAGCTGTCTTCTTCAGGAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000183594.2
ENSMUST00000184107.8
CDS-3UTR CAA 90 bp CAGTTTAGGCACAAGGCAACTTCCACGTTGAGTGGAGAGATGAGACAGTCTCTGGGCTTGGTTGACCACTaGTTCCCCAAGATGTTGTTC +
Preference number: 5 (lower is better)
Translates to: QFRHKATSTLSGEMRQSLGLVDH*FPKMLF
Trigger: GAACAACATCTTGGGGAACAAGTGGTCAACCAAGCC...CAGAGACTGTCTCATCTCTCCACTCAACGTGGAAGTTGCCTTGTGCCTAAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp CCCTTCCTTTTTAAGACACTAACAGGTATGCCGGGAATGCTAAGGGCCAATGGTATAGGAGGGGCTTGGTaGACCACTTGTTCCCCAAGA +
Preference number: 5 (lower is better)
Translates to: PFLFKTLTGMPGMLRANGIGGAW*TTCSPR
Trigger: TCTTGGGGAACAAGTGGTCAACCAAGCCCCTCCTAT...ACCATTGGCCCTTAGCATTCCCGGCATACCTGTTAGTGTCTTAAAAAGGAAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp AAGGACATGAACAAAGCATACAGGACTGCAAGGAGGGTTCTGGACTGTGACCATAATCATAGGAGGGGCTaGGTTGACCACTTGTTCCCC +
Preference number: 5 (lower is better)
Translates to: KDMNKAYRTARRVLDCDHNHRRG*VDHLFP
Trigger: GGGGAACAAGTGGTCAACCAAGCCCCTCCTATGATT...ATGGTCACAGTCCAGAACCCTCCTTGCAGTCCTGTATGCTTTGTTCATGTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp CCCTTCCTTTTTAAGACACTAACAGGTATGCCGGGAATGCTAAGGGCCAATGGTAATCATAGGAGGGGCTaGGTTGACCACTTGTTCCCC +
Preference number: 5 (lower is better)
Translates to: PFLFKTLTGMPGMLRANGNHRRG*VDHLFP
Trigger: GGGGAACAAGTGGTCAACCAAGCCCCTCCTATGATT...ACCATTGGCCCTTAGCATTCCCGGCATACCTGTTAGTGTCTTAAAAAGGAAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp CAGAAGCGACACACTGATTACAGCAGAGTGATATGCTGCAAACACCTCACGGCCACTGTGGGTCCCATCTaGCATAAAGAAAGTGCTAGC +
Preference number: 5 (lower is better)
Translates to: QKRHTDYSRVICCKHLTATVGPI*HKESAS
Trigger: GCTAGCACTTTCTTTATGCAAGATGGGACCCACAGT...GGCCGTGAGGTGTTTGCAGCATATCACTCTGCTGTAATCAGTGTGTCGCTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp CACGGACCAGCCAACTCAAAGGACAGAAGTAAAGCTAGGGTAAGGAACCGTGACACTGTGGGTCCCATCTaGCATAAAGAAAGTGCTAGC +
Preference number: 5 (lower is better)
Translates to: HGPANSKDRSKARVRNRDTVGPI*HKESAS
Trigger: GCTAGCACTTTCTTTATGCAAGATGGGACCCACAGT...GTCACGGTTCCTTACCCTAGCTTTACTTCTGTCCTTTGAGTTGGCTGGTCCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp ACACTAACAGGTATGCCGGGAATGCTAAGGGCCAATGGTTGCCACTGCTCTGTGACATTGGCGGAAGACTaGTGTTTATGTCTGTTGGTG +
Preference number: 5 (lower is better)
Translates to: TLTGMPGMLRANGCHCSVTLAED*CLCLLV
Trigger: CACCAACAGACATAAACACAAGTCTTCCGCCAATGT...CACAGAGCAGTGGCAACCATTGGCCCTTAGCATTCCCGGCATACCTGTTAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp CAGTTTAGGCACAAGGCAACTTCCACGTTGAGTGGAGAGATGAGACAGTCTCTGGGTGGAAGCTGGACATaGGCGGAAGACTTGTGTTTA +
Preference number: 5 (lower is better)
Translates to: QFRHKATSTLSGEMRQSLGGSWT*AEDLCL
Trigger: TAAACACAAGTCTTCCGCCAATGTCCAGCTTCCACC...CAGAGACTGTCTCATCTCTCCACTCAACGTGGAAGTTGCCTTGTGCCTAAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp CAGAAGCGACACACTGATTACAGCAGAGTGATATGCTGCAAACACCTCACGGCCGTGAGTTTTCATAGCTaGGAGATGAAGGAGCTTGCC +
Preference number: 5 (lower is better)
Translates to: QKRHTDYSRVICCKHLTAVSFHS*EMKELA
Trigger: GGCAAGCTCCTTCATCTCCAAGCTATGAAAACTCAC...GGCCGTGAGGTGTTTGCAGCATATCACTCTGCTGTAATCAGTGTGTCGCTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp TCATATGGCGAAGGTCGGAGAGGGCAACAAAGGACTCCCTTCCTTTTTAAGACATTAAGGCAGGCTGCTTaGGGGTTGAGGTTCCTCTCT +
Preference number: 5 (lower is better)
Translates to: SYGEGRRGQQRTPFLFKTLRQAA*GLRFLS
Trigger: AGAGAGGAACCTCAACCCCAAAGCAGCCTGCCTTAA...TGTCTTAAAAAGGAAGGGAGTCCTTTGTTGCCCTCTCCGACCTTCGCCATATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp AGAGGGCAACAAAGGACTCCCTTCCTTTTTAAGACACTAACAGGTATGCCGGGATTAAGGCAGGCTGCTTaGGGGTTGAGGTTCCTCTCT +
Preference number: 5 (lower is better)
Translates to: RGQQRTPFLFKTLTGMPGLRQAA*GLRFLS
Trigger: AGAGAGGAACCTCAACCCCAAAGCAGCCTGCCTTAA...TCCCGGCATACCTGTTAGTGTCTTAAAAAGGAAGGGAGTCCTTTGTTGCCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp ACACTAACAGGTATGCCGGGAATGCTAAGGGCCAATGGTTGCCACTGCTCTGTGGAAGGACATTGCATCTaGCAAATGCTCGTGAAGTTG +
Preference number: 5 (lower is better)
Translates to: TLTGMPGMLRANGCHCSVEGHCI*QMLVKL
Trigger: CAACTTCACGAGCATTTGCAAGATGCAATGTCCTTC...CACAGAGCAGTGGCAACCATTGGCCCTTAGCATTCCCGGCATACCTGTTAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
CDS-3UTR CAA 90 bp CCCCACGGACCAGCCAACTCAAAGGACAGAAGTAAAGCTAGGGTAAGGAACCGTGAAGGACATTGCATCTaGCAAATGCTCGTGAAGTTG +
Preference number: 5 (lower is better)
Translates to: PHGPANSKDRSKARVRNREGHCI*QMLVKL
Trigger: CAACTTCACGAGCATTTGCAAGATGCAATGTCCTTC...ACGGTTCCTTACCCTAGCTTTACTTCTGTCCTTTGAGTTGGCTGGTCCGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000183404.8
ENSMUST00000183918.8
CDS-3UTR CAA 90 bp AATGAAGGCTGCCATAACTACTGGACTGAGACATGTGGGATGTGGAGGTCCCCATACTTCCCAGTGTTGTaGGTCTCGTTTTCCCACTAT +
Preference number: 5 (lower is better)
Translates to: NEGCHNYWTETCGMWRSPYFPVL*VSFSHY
Trigger: ATAGTGGGAAAACGAGACCAACAACACTGGGAAGTA...TGGGGACCTCCACATCCCACATGTCTCAGTCCAGTAGTTATGGCAGCCTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184867.8
CDS-3UTR CAA 90 bp ACGTTGAGTGGAGAGATGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGATGACTACTTCCCAGTGTaGTTGGTCTCGTTTTCCCAC +
Preference number: 5 (lower is better)
Translates to: TLSGEMRQSLIVQKRHTDDYFPV*LVSFSH
Trigger: GTGGGAAAACGAGACCAACAACACTGGGAAGTAGTC...ATCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCATCTCTCCACTCAACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp TTCAAGGACATGAACAAAGCATACAGGACTGCAAGGAGGGTTCTGGACTGTGACGACTACTTCCCAGTGTaGTTGGTCTCGTTTTCCCAC +
Preference number: 5 (lower is better)
Translates to: FKDMNKAYRTARRVLDCDDYFPV*LVSFSH
Trigger: GTGGGAAAACGAGACCAACAACACTGGGAAGTAGTC...GTCACAGTCCAGAACCCTCCTTGCAGTCCTGTATGCTTTGTTCATGTCCTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp TCTTCGCTTGTAAAGGATCTAGGGCTACAGAATCATGGAGCGGTCTTCTTCTCGGACTACTTCCCAGTGTaGTTGGTCTCGTTTTCCCAC +
Preference number: 5 (lower is better)
Translates to: SSLVKDLGLQNHGAVFFSDYFPV*LVSFSH
Trigger: GTGGGAAAACGAGACCAACAACACTGGGAAGTAGTC...CGAGAAGAAGACCGCTCCATGATTCTGTAGCCCTAGATCCTTTACAAGCGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000183594.2
ENSMUST00000184107.8
CDS-3UTR CAA 90 bp AAATCACTATTCATATGGCGAAGGTCGGAGAGGGCAACAAAGGACTCCCTTCCTGACTACTTCCCAGTGTaGTTGGTCTCGTTTTCCCAC +
Preference number: 5 (lower is better)
Translates to: KSLFIWRRSERATKDSLPDYFPV*LVSFSH
Trigger: GTGGGAAAACGAGACCAACAACACTGGGAAGTAGTC...AGGAAGGGAGTCCTTTGTTGCCCTCTCCGACCTTCGCCATATGAATAGTGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp AGAGGGCAACAAAGGACTCCCTTCCTTTTTAAGACACTAACAGGTATGCCGGGATTGTTCCCCAAGATGTaGTTCCTCCACGCTCATCCA +
Preference number: 5 (lower is better)
Translates to: RGQQRTPFLFKTLTGMPGLFPKM*FLHAHP
Trigger: TGGATGAGCGTGGAGGAACAACATCTTGGGGAACAA...TCCCGGCATACCTGTTAGTGTCTTAAAAAGGAAGGGAGTCCTTTGTTGCCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp CCCTTCCTTTTTAAGACACTAACAGGTATGCCGGGAATGCTAAGGGCCAATGGTTTGTTCCCCAAGATGTaGTTCCTCCACGCTCATCCA +
Preference number: 5 (lower is better)
Translates to: PFLFKTLTGMPGMLRANGLFPKM*FLHAHP
Trigger: TGGATGAGCGTGGAGGAACAACATCTTGGGGAACAA...ACCATTGGCCCTTAGCATTCCCGGCATACCTGTTAGTGTCTTAAAAAGGAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp ACAGAAGAAGGTAGGCCAGGAGGCACCTTTCTTACTTTCTTCGCTTGTAAAGGAATAGGAGGGGCTTGGTaGACCACTTGTTCCCCAAGA +
Preference number: 5 (lower is better)
Translates to: TEEGRPGGTFLTFFACKGIGGAW*TTCSPR
Trigger: TCTTGGGGAACAAGTGGTCAACCAAGCCCCTCCTAT...TCCTTTACAAGCGAAGAAAGTAAGAAAGGTGCCTCCTGGCCTACCTTCTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184107.8
CDS-3UTR CAA 90 bp CACGGACCAGCCAACTCAAAGGACAGAAGTAAAGCTAGGGTAAGGAACCGTGACACATTGGCGGAAGACTaGTGTTTATGTCTGTTGGTG +
Preference number: 5 (lower is better)
Translates to: HGPANSKDRSKARVRNRDTLAED*CLCLLV
Trigger: CACCAACAGACATAAACACAAGTCTTCCGCCAATGT...GTCACGGTTCCTTACCCTAGCTTTACTTCTGTCCTTTGAGTTGGCTGGTCCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp ACGTTGAGTGGAGAGATGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGATGGTGGAAGCTGGACATaGGCGGAAGACTTGTGTTTA +
Preference number: 5 (lower is better)
Translates to: TLSGEMRQSLIVQKRHTDGGSWT*AEDLCL
Trigger: TAAACACAAGTCTTCCGCCAATGTCCAGCTTCCACC...ATCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCATCTCTCCACTCAACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp CAGAAGCGACACACTGATTACAGCAGAGTGATATGCTGCAAACACCTCACGGCCATGCTATCTGATCCATaGATGGGAGGAGTATGTGAG +
Preference number: 5 (lower is better)
Translates to: QKRHTDYSRVICCKHLTAMLSDP*MGGVCE
Trigger: CTCACATACTCCTCCCATCAATGGATCAGATAGCAT...GGCCGTGAGGTGTTTGCAGCATATCACTCTGCTGTAATCAGTGTGTCGCTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp CCCCACGGACCAGCCAACTCAAAGGACAGAAGTAAAGCTAGGGTAAGGAACCGTATGGAAAACTACTGCTaGTGTGGTCAGGGGAATAAA +
Preference number: 5 (lower is better)
Translates to: PHGPANSKDRSKARVRNRMENYC*CGQGNK
Trigger: TTTATTCCCCTGACCACACAAGCAGTAGTTTTCCAT...ACGGTTCCTTACCCTAGCTTTACTTCTGTCCTTTGAGTTGGCTGGTCCGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp AGTTACAGAACGACTTGGGATTTTTCTTCTGTGCAGACTGCCACTGCTATTGGCTTAAGGCAGGCTGCTTaGGGGTTGAGGTTCCTCTCT +
Preference number: 5 (lower is better)
Translates to: SYRTTWDFSSVQTATAIGLRQAA*GLRFLS
Trigger: AGAGAGGAACCTCAACCCCAAAGCAGCCTGCCTTAA...GCCAATAGCAGTGGCAGTCTGCACAGAAGAAAAATCCCAAGTCGTTCTGTAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp ACACTAACAGGTATGCCGGGAATGCTAAGGGCCAATGGTTGCCACTGCTCTGTGCAAATGCTCGTGAAGTaGCTGCTCAACTCGATTTTT +
Preference number: 5 (lower is better)
Translates to: TLTGMPGMLRANGCHCSVQMLVK*LLNSIF
Trigger: AAAAATCGAGTTGAGCAGCAACTTCACGAGCATTTG...CACAGAGCAGTGGCAACCATTGGCCCTTAGCATTCCCGGCATACCTGTTAGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
CDS TCA 90 bp CAAGATGTTGTTCCTCCACGCTCATCCATACCTGACCCGCTGAACTaGCTACTTCCCAGTGTTGTTGGTCTCGTTTTCCCACTATTAACA +
Preference number: 5 (lower is better)
Translates to: QDVVPPRSSIPDPLN*LLPSVVGLVFPLLT
Trigger: TGTTAATAGTGGGAAAACGAGACCAACAACACTGGGAAGTAGTCAGTTCAGCGGGTCAGGTATGGATGAGCGTGGAGGAACAACATCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183492.8
ENSMUST00000183992.8
ENSMUST00000184107.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp GTGTTCACCAGAGTCCTGATGGAGGATCTGAAGTGCTGTCTTCATGGTTTTTGTTTGTTCCCCAAGATGTaGTTCCTCCACGCTCATCCA +
Preference number: 5 (lower is better)
Translates to: VFTRVLMEDLKCCLHGFCLFPKM*FLHAHP
Trigger: TGGATGAGCGTGGAGGAACAACATCTTGGGGAACAA...ACAAAAACCATGAAGACAGCACTTCAGATCCTCCATCAGGACTCTGGTGAACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp GAACTGTGGGTCCCATCTTGCATAAAGAAAGTGCTAGCGAACATACTGGTTGGTGGCTTGGTTGACCACTaGTTCCCCAAGATGTTGTTC +
Preference number: 5 (lower is better)
Translates to: ELWVPSCIKKVLANILVGGLVDH*FPKMLF
Trigger: GAACAACATCTTGGGGAACAAGTGGTCAACCAAGCC...ACCAACCAGTATGTTCGCTAGCACTTTCTTTATGCAAGATGGGACCCACAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184107.8
CDS-3UTR CAA 90 bp TCTTCTGTGCAGACTGCCACTGCTATTGGCTTTAAGGAGTTACTTAGCCAAGACGGCTTGGTTGACCACTaGTTCCCCAAGATGTTGTTC +
Preference number: 5 (lower is better)
Translates to: SSVQTATAIGFKELLSQDGLVDH*FPKMLF
Trigger: GAACAACATCTTGGGGAACAAGTGGTCAACCAAGCC...GTCTTGGCTAAGTAACTCCTTAAAGCCAATAGCAGTGGCAGTCTGCACAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp CAGTTTAGGCACAAGGCAACTTCCACGTTGAGTGGAGAGATGAGACAGTCTCTGCTAGGAGATTCACGGTaGAAATCGTCAGAATTTGGG +
Preference number: 5 (lower is better)
Translates to: QFRHKATSTLSGEMRQSLLGDSR*KSSEFG
Trigger: CCCAAATTCTGACGATTTCAACCGTGAATCTCCTAG...CAGAGACTGTCTCATCTCTCCACTCAACGTGGAAGTTGCCTTGTGCCTAAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp ACGTTGAGTGGAGAGATGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGATACTGTGGGTCCCATCTaGCATAAAGAAAGTGCTAGC +
Preference number: 5 (lower is better)
Translates to: TLSGEMRQSLIVQKRHTDTVGPI*HKESAS
Trigger: GCTAGCACTTTCTTTATGCAAGATGGGACCCACAGT...ATCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCATCTCTCCACTCAACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp CAGTTTAGGCACAAGGCAACTTCCACGTTGAGTGGAGAGATGAGACAGTCTCTGATGCTATCTGATCCATaGATGGGAGGAGTATGTGAG +
Preference number: 5 (lower is better)
Translates to: QFRHKATSTLSGEMRQSLMLSDP*MGGVCE
Trigger: CTCACATACTCCTCCCATCAATGGATCAGATAGCAT...CAGAGACTGTCTCATCTCTCCACTCAACGTGGAAGTTGCCTTGTGCCTAAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp ACGTTGAGTGGAGAGATGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGATGTGAGTTTTCATAGCTaGGAGATGAAGGAGCTTGCC +
Preference number: 5 (lower is better)
Translates to: TLSGEMRQSLIVQKRHTDVSFHS*EMKELA
Trigger: GGCAAGCTCCTTCATCTCCAAGCTATGAAAACTCAC...ATCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCATCTCTCCACTCAACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp TCATATGGCGAAGGTCGGAGAGGGCAACAAAGGACTCCCTTCCTTTTTAAGACATACTTCCCAGTGTTGTaGGTCTCGTTTTCCCACTAT +
Preference number: 5 (lower is better)
Translates to: SYGEGRRGQQRTPFLFKTYFPVL*VSFSHY
Trigger: ATAGTGGGAAAACGAGACCAACAACACTGGGAAGTA...TGTCTTAAAAAGGAAGGGAGTCCTTTGTTGCCCTCTCCGACCTTCGCCATATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp GGGAGATGGGTAACTAGGAGATTCACGGTTGAAATCGTCAGAATTTGGGGATGGTACTTCCCAGTGTTGTaGGTCTCGTTTTCCCACTAT +
Preference number: 5 (lower is better)
Translates to: GRWVTRRFTVEIVRIWGWYFPVL*VSFSHY
Trigger: ATAGTGGGAAAACGAGACCAACAACACTGGGAAGTA...CCATCCCCAAATTCTGACGATTTCAACCGTGAATCTCCTAGTTACCCATCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000183594.2
ENSMUST00000184107.8
CDS-3UTR CAA 90 bp TTACTTTCTTCGCTTGTAAAGGATCTAGGGCTACAGAATCATGGAGCGGTCTTCGACTACTTCCCAGTGTaGTTGGTCTCGTTTTCCCAC +
Preference number: 5 (lower is better)
Translates to: LLSSLVKDLGLQNHGAVFDYFPV*LVSFSH
Trigger: GTGGGAAAACGAGACCAACAACACTGGGAAGTAGTC...GAAGACCGCTCCATGATTCTGTAGCCCTAGATCCTTTACAAGCGAAGAAAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000183594.2
ENSMUST00000184107.8
CDS-3UTR CAA 90 bp GCTTTAACAATGCTGGCATCAGCTGAGTGTACATCAGCTTCCCACATGAACTTTTTGTTCCCCAAGATGTaGTTCCTCCACGCTCATCCA +
Preference number: 5 (lower is better)
Translates to: ALTMLASAECTSASHMNFLFPKM*FLHAHP
Trigger: TGGATGAGCGTGGAGGAACAACATCTTGGGGAACAA...AAAGTTCATGTGGGAAGCTGATGTACACTCAGCTGATGCCAGCATTGTTAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp GTCCCGGAGACTCACCAGGAAAAGTCATCTTTGTATTGTACTGAATGCATTCTGGGCTTGGTTGACCACTaGTTCCCCAAGATGTTGTTC +
Preference number: 5 (lower is better)
Translates to: VPETHQEKSSLYCTECILGLVDH*FPKMLF
Trigger: GAACAACATCTTGGGGAACAAGTGGTCAACCAAGCC...CAGAATGCATTCAGTACAATACAAAGATGACTTTTCCTGGTGAGTCTCCGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp GCCAACTCAAAGGACAGAAGTAAAGCTAGGGTAAGGAACCGTGACCATTGCTCTGTCTTCTTCTCGAACTaGTGGCAGAGAATGAGTAGT +
Preference number: 5 (lower is better)
Translates to: ANSKDRSKARVRNRDHCSVFFSN*WQRMSS
Trigger: ACTACTCATTCTCTGCCACAAGTTCGAGAAGAAGAC...AGAGCAATGGTCACGGTTCCTTACCCTAGCTTTACTTCTGTCCTTTGAGTTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp CCCTTCCTTTTTAAGACACTAACAGGTATGCCGGGAATGCTAAGGGCCAATGGTGTCTTCTTCTCGAACTaGTGGCAGAGAATGAGTAGT +
Preference number: 5 (lower is better)
Translates to: PFLFKTLTGMPGMLRANGVFFSN*WQRMSS
Trigger: ACTACTCATTCTCTGCCACAAGTTCGAGAAGAAGAC...ACCATTGGCCCTTAGCATTCCCGGCATACCTGTTAGTGTCTTAAAAAGGAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp TTCAAGGACATGAACAAAGCATACAGGACTGCAAGGAGGGTTCTGGACTGTGACGTCTTCTTCTCGAACTaGTGGCAGAGAATGAGTAGT +
Preference number: 5 (lower is better)
Translates to: FKDMNKAYRTARRVLDCDVFFSN*WQRMSS
Trigger: ACTACTCATTCTCTGCCACAAGTTCGAGAAGAAGAC...GTCACAGTCCAGAACCCTCCTTGCAGTCCTGTATGCTTTGTTCATGTCCTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp GCCAACTCAAAGGACAGAAGTAAAGCTAGGGTAAGGAACCGTGACCATTGCTCTTTGTGTTTATGTCTGTaGGTGACACTGAGTGTGGAG +
Preference number: 5 (lower is better)
Translates to: ANSKDRSKARVRNRDHCSLCLCL*VTLSVE
Trigger: CTCCACACTCAGTGTCACCAACAGACATAAACACAA...AGAGCAATGGTCACGGTTCCTTACCCTAGCTTTACTTCTGTCCTTTGAGTTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp TCATATGGCGAAGGTCGGAGAGGGCAACAAAGGACTCCCTTCCTTTTTAAGACATTGTGTTTATGTCTGTaGGTGACACTGAGTGTGGAG +
Preference number: 5 (lower is better)
Translates to: SYGEGRRGQQRTPFLFKTLCLCL*VTLSVE
Trigger: CTCCACACTCAGTGTCACCAACAGACATAAACACAA...TGTCTTAAAAAGGAAGGGAGTCCTTTGTTGCCCTCTCCGACCTTCGCCATATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp GCTTTAACAATGCTGGCATCAGCTGAGTGTACATCAGCTTCCCACATGAACTTTGGTGGAAGCTGGACATaGGCGGAAGACTTGTGTTTA +
Preference number: 5 (lower is better)
Translates to: ALTMLASAECTSASHMNFGGSWT*AEDLCL
Trigger: TAAACACAAGTCTTCCGCCAATGTCCAGCTTCCACC...AAAGTTCATGTGGGAAGCTGATGTACACTCAGCTGATGCCAGCATTGTTAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp ACGTTGAGTGGAGAGATGAGACAGTCTCTGATTGTGCAGAAGCGACACACTGATATGCTATCTGATCCATaGATGGGAGGAGTATGTGAG +
Preference number: 5 (lower is better)
Translates to: TLSGEMRQSLIVQKRHTDMLSDP*MGGVCE
Trigger: CTCACATACTCCTCCCATCAATGGATCAGATAGCAT...ATCAGTGTGTCGCTTCTGCACAATCAGAGACTGTCTCATCTCTCCACTCAACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp GCCAACTCAAAGGACAGAAGTAAAGCTAGGGTAAGGAACCGTGACCATTGCTCTATGCTATCTGATCCATaGATGGGAGGAGTATGTGAG +
Preference number: 5 (lower is better)
Translates to: ANSKDRSKARVRNRDHCSMLSDP*MGGVCE
Trigger: CTCACATACTCCTCCCATCAATGGATCAGATAGCAT...AGAGCAATGGTCACGGTTCCTTACCCTAGCTTTACTTCTGTCCTTTGAGTTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp CAGAAGCGACACACTGATTACAGCAGAGTGATATGCTGCAAACACCTCACGGCCACTTCCAGACTGATTTaGTACACCACCTCTGAAATT +
Preference number: 5 (lower is better)
Translates to: QKRHTDYSRVICCKHLTATSRLI*YTTSEI
Trigger: AATTTCAGAGGTGGTGTACAAAATCAGTCTGGAAGT...GGCCGTGAGGTGTTTGCAGCATATCACTCTGCTGTAATCAGTGTGTCGCTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp TGTCCAAATCTTATGAGGAGAGGTCACCTTCTATTTAGCCTACTGATGACTCTGTTAAGGCAGGCTGCTTaGGGGTTGAGGTTCCTCTCT +
Preference number: 5 (lower is better)
Translates to: CPNLMRRGHLLFSLLMTLLRQAA*GLRFLS
Trigger: AGAGAGGAACCTCAACCCCAAAGCAGCCTGCCTTAA...CAGAGTCATCAGTAGGCTAAATAGAAGGTGACCTCTCCTCATAAGATTTGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp TCTTCTGTGCAGACTGCCACTGCTATTGGCTTTAAGGAGTTACTTAGCCAAGACCTAGGAGATTCACGGTaGAAATCGTCAGAATTTGGG +
Preference number: 5 (lower is better)
Translates to: SSVQTATAIGFKELLSQDLGDSR*KSSEFG
Trigger: CCCAAATTCTGACGATTTCAACCGTGAATCTCCTAG...GTCTTGGCTAAGTAACTCCTTAAAGCCAATAGCAGTGGCAGTCTGCACAGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp GAAACCCTTTATGTAACAACGGACCCTCTTCCACATACACACTTCCCACAACACCTAGGAGATTCACGGTaGAAATCGTCAGAATTTGGG +
Preference number: 5 (lower is better)
Translates to: ETLYVTTDPLPHTHFPQHLGDSR*KSSEFG
Trigger: CCCAAATTCTGACGATTTCAACCGTGAATCTCCTAG...GTGTTGTGGGAAGTGTGTATGTGGAAGAGGGTCCGTTGTTACATAAAGGGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184029.2
CDS-3UTR CAA 90 bp GTCCCGGAGACTCACCAGGAAAAGTCATCTTTGTATTGTACTGAATGCATTCTGACTGTGGGTCCCATCTaGCATAAAGAAAGTGCTAGC +
Preference number: 5 (lower is better)
Translates to: VPETHQEKSSLYCTECILTVGPI*HKESAS
Trigger: GCTAGCACTTTCTTTATGCAAGATGGGACCCACAGT...CAGAATGCATTCAGTACAATACAAAGATGACTTTTCCTGGTGAGTCTCCGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp AGAGGGCAACAAAGGACTCCCTTCCTTTTTAAGACACTAACAGGTATGCCGGGAATGGAAAACTACTGCTaGTGTGGTCAGGGGAATAAA +
Preference number: 5 (lower is better)
Translates to: RGQQRTPFLFKTLTGMPGMENYC*CGQGNK
Trigger: TTTATTCCCCTGACCACACAAGCAGTAGTTTTCCAT...TCCCGGCATACCTGTTAGTGTCTTAAAAAGGAAGGGAGTCCTTTGTTGCCCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp TTAAGGAGTTACTTAGCCAAGACCATCACGCTTAGCATGTTTTTCTCTCCCAGGGTGAGTTTTCATAGCTaGGAGATGAAGGAGCTTGCC +
Preference number: 5 (lower is better)
Translates to: LRSYLAKTITLSMFFSPRVSFHS*EMKELA
Trigger: GGCAAGCTCCTTCATCTCCAAGCTATGAAAACTCAC...CCTGGGAGAGAAAAACATGCTAAGCGTGATGGTCTTGGCTAAGTAACTCCTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp GCTTTAACAATGCTGGCATCAGCTGAGTGTACATCAGCTTCCCACATGAACTTTGTGAGTTTTCATAGCTaGGAGATGAAGGAGCTTGCC +
Preference number: 5 (lower is better)
Translates to: ALTMLASAECTSASHMNFVSFHS*EMKELA
Trigger: GGCAAGCTCCTTCATCTCCAAGCTATGAAAACTCAC...AAAGTTCATGTGGGAAGCTGATGTACACTCAGCTGATGCCAGCATTGTTAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp CCCTTCCTTTTTAAGACACTAACAGGTATGCCGGGAATGCTAAGGGCCAATGGTCAAATGCTCGTGAAGTaGCTGCTCAACTCGATTTTT +
Preference number: 5 (lower is better)
Translates to: PFLFKTLTGMPGMLRANGQMLVK*LLNSIF
Trigger: AAAAATCGAGTTGAGCAGCAACTTCACGAGCATTTG...ACCATTGGCCCTTAGCATTCCCGGCATACCTGTTAGTGTCTTAAAAAGGAAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
CDS-3UTR CAA 90 bp GCTTTAACAATGCTGGCATCAGCTGAGTGTACATCAGCTTCCCACATGAACTTTCTAGGAGATTCACGGTaGAAATCGTCAGAATTTGGG +
Preference number: 5 (lower is better)
Translates to: ALTMLASAECTSASHMNFLGDSR*KSSEFG
Trigger: CCCAAATTCTGACGATTTCAACCGTGAATCTCCTAG...AAAGTTCATGTGGGAAGCTGATGTACACTCAGCTGATGCCAGCATTGTTAAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp GTCCCGGAGACTCACCAGGAAAAGTCATCTTTGTATTGTACTGAATGCATTCTGCTAGGAGATTCACGGTaGAAATCGTCAGAATTTGGG +
Preference number: 5 (lower is better)
Translates to: VPETHQEKSSLYCTECILLGDSR*KSSEFG
Trigger: CCCAAATTCTGACGATTTCAACCGTGAATCTCCTAG...CAGAATGCATTCAGTACAATACAAAGATGACTTTTCCTGGTGAGTCTCCGGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp GCTTTAACAATGCTGGCATCAGCTGAGTGTACATCAGCTTCCCACATGAACTTTTTGTGTTTATGTCTGTaGGTGACACTGAGTGTGGAG +
Preference number: 5 (lower is better)
Translates to: ALTMLASAECTSASHMNFLCLCL*VTLSVE
Trigger: CTCCACACTCAGTGTCACCAACAGACATAAACACAA...AAAGTTCATGTGGGAAGCTGATGTACACTCAGCTGATGCCAGCATTGTTAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp GTCCCGGAGACTCACCAGGAAAAGTCATCTTTGTATTGTACTGAATGCATTCTGATGCTATCTGATCCATaGATGGGAGGAGTATGTGAG +
Preference number: 5 (lower is better)
Translates to: VPETHQEKSSLYCTECILMLSDP*MGGVCE
Trigger: CTCACATACTCCTCCCATCAATGGATCAGATAGCAT...CAGAATGCATTCAGTACAATACAAAGATGACTTTTCCTGGTGAGTCTCCGGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp TGTCCAAATCTTATGAGGAGAGGTCACCTTCTATTTAGCCTACTGATGACTCTGGTGAGTTTTCATAGCTaGGAGATGAAGGAGCTTGCC +
Preference number: 5 (lower is better)
Translates to: CPNLMRRGHLLFSLLMTLVSFHS*EMKELA
Trigger: GGCAAGCTCCTTCATCTCCAAGCTATGAAAACTCAC...CAGAGTCATCAGTAGGCTAAATAGAAGGTGACCTCTCCTCATAAGATTTGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp TCATATGGCGAAGGTCGGAGAGGGCAACAAAGGACTCCCTTCCTTTTTAAGACAACTTCCAGACTGATTTaGTACACCACCTCTGAAATT +
Preference number: 5 (lower is better)
Translates to: SYGEGRRGQQRTPFLFKTTSRLI*YTTSEI
Trigger: AATTTCAGAGGTGGTGTACAAAATCAGTCTGGAAGT...TGTCTTAAAAAGGAAGGGAGTCCTTTGTTGCCCTCTCCGACCTTCGCCATATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp AAATCACTATTCATATGGCGAAGGTCGGAGAGGGCAACAAAGGACTCCCTTCCTACTTCCAGACTGATTTaGTACACCACCTCTGAAATT +
Preference number: 5 (lower is better)
Translates to: KSLFIWRRSERATKDSLPTSRLI*YTTSEI
Trigger: AATTTCAGAGGTGGTGTACAAAATCAGTCTGGAAGT...AGGAAGGGAGTCCTTTGTTGCCCTCTCCGACCTTCGCCATATGAATAGTGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp TACTTATCAGCTAACACTTTACAAGTACTATATTGTGTAGTACTTACTGCTCGGAGGCGCTCTCTGGCATaGTTAGCCATCCGCCTTTCC +
Preference number: 5 (lower is better)
Translates to: YLSANTLQVLYCVVLTARRRSLA*LAIRLS
Trigger: GGAAAGGCGGATGGCTAACAATGCCAGAGAGCGCCT...CCGAGCAGTAAGTACTACACAATATAGTACTTGTAAAGTGTTAGCTGATAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp CTTGTAAGTTACACTTCTTGCTATTATAGCTTTACTATGAAACCTAGAAGCCTGAGGCGCTCTCTGGCATaGTTAGCCATCCGCCTTTCC +
Preference number: 5 (lower is better)
Translates to: LVSYTSCYYSFTMKPRSLRRSLA*LAIRLS
Trigger: GGAAAGGCGGATGGCTAACAATGCCAGAGAGCGCCT...CAGGCTTCTAGGTTTCATAGTAAAGCTATAATAGCAAGAAGTGTAACTTACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp GTCCCGGAGACTCACCAGGAAAAGTCATCTTTGTATTGTACTGAATGCATTCTGGAAGGACATTGCATCTaGCAAATGCTCGTGAAGTTG +
Preference number: 5 (lower is better)
Translates to: VPETHQEKSSLYCTECILEGHCI*QMLVKL
Trigger: CAACTTCACGAGCATTTGCAAGATGCAATGTCCTTC...CAGAATGCATTCAGTACAATACAAAGATGACTTTTCCTGGTGAGTCTCCGGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
CDS-3UTR CAA 90 bp TTGCATAAAGAAAGTGCTAGCGAACATACTGGTTGGTGGCTTGGGAGATGGGTAAGGAAGAGATGTTTCTaGCATCTTTTTCTGACAGCC +
Preference number: 5 (lower is better)
Translates to: LHKESASEHTGWWLGRWVRKRCF*HLFLTA
Trigger: GGCTGTCAGAAAAAGATGCAAGAAACATCTCTTCCT...TACCCATCTCCCAAGCCACCAACCAGTATGTTCGCTAGCACTTTCTTTATGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000183647.8
CDS-3UTR CAA 90 bp CATTTGTCAATTCAGTTTAGGCACAAGGCAACTTCCACGTTGAGTGGAGAGATGTACATCAAAGAATTGTaGCCCATTCCAGGGACAGGA +
Preference number: 5 (lower is better)
Translates to: HLSIQFRHKATSTLSGEMYIKEL*PIPGTG
Trigger: TCCTGTCCCTGGAATGGGCAACAATTCTTTGATGTA...CATCTCTCCACTCAACGTGGAAGTTGCCTTGTGCCTAAACTGAATTGACAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183918.8
CDS-3UTR CAA 90 bp ATAGAGTCTGATCTAACTGGAGAACATATACAAATTAAGTCCACTAAGTTCGCCATAGGAGGGGCTTGGTaGACCACTTGTTCCCCAAGA +
Preference number: 5 (lower is better)
Translates to: IESDLTGEHIQIKSTKFAIGGAW*TTCSPR
Trigger: TCTTGGGGAACAAGTGGTCAACCAAGCCCCTCCTAT...GGCGAACTTAGTGGACTTAATTTGTATATGTTCTCCAGTTAGATCAGACTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp TGTCCAAATCTTATGAGGAGAGGTCACCTTCTATTTAGCCTACTGATGACTCTGACATTGGCGGAAGACTaGTGTTTATGTCTGTTGGTG +
Preference number: 5 (lower is better)
Translates to: CPNLMRRGHLLFSLLMTLTLAED*CLCLLV
Trigger: CACCAACAGACATAAACACAAGTCTTCCGCCAATGT...CAGAGTCATCAGTAGGCTAAATAGAAGGTGACCTCTCCTCATAAGATTTGGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp TTAAGGAGTTACTTAGCCAAGACCATCACGCTTAGCATGTTTTTCTCTCCCAGGATGGAAAACTACTGCTaGTGTGGTCAGGGGAATAAA +
Preference number: 5 (lower is better)
Translates to: LRSYLAKTITLSMFFSPRMENYC*CGQGNK
Trigger: TTTATTCCCCTGACCACACAAGCAGTAGTTTTCCAT...CCTGGGAGAGAAAAACATGCTAAGCGTGATGGTCTTGGCTAAGTAACTCCTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp TTTTTCCTATTTCATGGAAATCACTATTCATATGGCGAAGGTCGGAGAGGGCAATACTTCCCAGTGTTGTaGGTCTCGTTTTCCCACTAT +
Preference number: 5 (lower is better)
Translates to: FFLFHGNHYSYGEGRRGQYFPVL*VSFSHY
Trigger: ATAGTGGGAAAACGAGACCAACAACACTGGGAAGTA...TTGCCCTCTCCGACCTTCGCCATATGAATAGTGATTTCCATGAAATAGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp CTTGTAAGTTACACTTCTTGCTATTATAGCTTTACTATGAAACCTAGAAGCCTGAATCATAGGAGGGGCTaGGTTGACCACTTGTTCCCC +
Preference number: 5 (lower is better)
Translates to: LVSYTSCYYSFTMKPRSLNHRRG*VDHLFP
Trigger: GGGGAACAAGTGGTCAACCAAGCCCCTCCTATGATT...CAGGCTTCTAGGTTTCATAGTAAAGCTATAATAGCAAGAAGTGTAACTTACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp TTTTTCCTATTTCATGGAAATCACTATTCATATGGCGAAGGTCGGAGAGGGCAATTGTGTTTATGTCTGTaGGTGACACTGAGTGTGGAG +
Preference number: 5 (lower is better)
Translates to: FFLFHGNHYSYGEGRRGQLCLCL*VTLSVE
Trigger: CTCCACACTCAGTGTCACCAACAGACATAAACACAA...TTGCCCTCTCCGACCTTCGCCATATGAATAGTGATTTCCATGAAATAGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp TTTTTCCTATTTCATGGAAATCACTATTCATATGGCGAAGGTCGGAGAGGGCAAACATTGGCGGAAGACTaGTGTTTATGTCTGTTGGTG +
Preference number: 5 (lower is better)
Translates to: FFLFHGNHYSYGEGRRGQTLAED*CLCLLV
Trigger: CACCAACAGACATAAACACAAGTCTTCCGCCAATGT...TTGCCCTCTCCGACCTTCGCCATATGAATAGTGATTTCCATGAAATAGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp CCACAGATAGAGTCTGATCTAACTGGAGAACATATACAAATTAAGTCCACTAAGGGTGGAAGCTGGACATaGGCGGAAGACTTGTGTTTA +
Preference number: 5 (lower is better)
Translates to: PQIESDLTGEHIQIKSTKGGSWT*AEDLCL
Trigger: TAAACACAAGTCTTCCGCCAATGTCCAGCTTCCACC...CTTAGTGGACTTAATTTGTATATGTTCTCCAGTTAGATCAGACTCTATCTGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp GTCCCGGAGACTCACCAGGAAAAGTCATCTTTGTATTGTACTGAATGCATTCTGACTTCCAGACTGATTTaGTACACCACCTCTGAAATT +
Preference number: 5 (lower is better)
Translates to: VPETHQEKSSLYCTECILTSRLI*YTTSEI
Trigger: AATTTCAGAGGTGGTGTACAAAATCAGTCTGGAAGT...CAGAATGCATTCAGTACAATACAAAGATGACTTTTCCTGGTGAGTCTCCGGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp GCTTTAACAATGCTGGCATCAGCTGAGTGTACATCAGCTTCCCACATGAACTTTACTTCCAGACTGATTTaGTACACCACCTCTGAAATT +
Preference number: 5 (lower is better)
Translates to: ALTMLASAECTSASHMNFTSRLI*YTTSEI
Trigger: AATTTCAGAGGTGGTGTACAAAATCAGTCTGGAAGT...AAAGTTCATGTGGGAAGCTGATGTACACTCAGCTGATGCCAGCATTGTTAAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp CTTGTAAGTTACACTTCTTGCTATTATAGCTTTACTATGAAACCTAGAAGCCTGGGCTTGGTTGACCACTaGTTCCCCAAGATGTTGTTC +
Preference number: 5 (lower is better)
Translates to: LVSYTSCYYSFTMKPRSLGLVDH*FPKMLF
Trigger: GAACAACATCTTGGGGAACAAGTGGTCAACCAAGCC...CAGGCTTCTAGGTTTCATAGTAAAGCTATAATAGCAAGAAGTGTAACTTACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp CCACAGATAGAGTCTGATCTAACTGGAGAACATATACAAATTAAGTCCACTAAGACTGTGGGTCCCATCTaGCATAAAGAAAGTGCTAGC +
Preference number: 5 (lower is better)
Translates to: PQIESDLTGEHIQIKSTKTVGPI*HKESAS
Trigger: GCTAGCACTTTCTTTATGCAAGATGGGACCCACAGT...CTTAGTGGACTTAATTTGTATATGTTCTCCAGTTAGATCAGACTCTATCTGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp TTTTTCCTATTTCATGGAAATCACTATTCATATGGCGAAGGTCGGAGAGGGCAAATGGAAAACTACTGCTaGTGTGGTCAGGGGAATAAA +
Preference number: 5 (lower is better)
Translates to: FFLFHGNHYSYGEGRRGQMENYC*CGQGNK
Trigger: TTTATTCCCCTGACCACACAAGCAGTAGTTTTCCAT...TTGCCCTCTCCGACCTTCGCCATATGAATAGTGATTTCCATGAAATAGGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp ATAGAGTCTGATCTAACTGGAGAACATATACAAATTAAGTCCACTAAGTTCGCCTACTTCCCAGTGTTGTaGGTCTCGTTTTCCCACTAT +
Preference number: 5 (lower is better)
Translates to: IESDLTGEHIQIKSTKFAYFPVL*VSFSHY
Trigger: ATAGTGGGAAAACGAGACCAACAACACTGGGAAGTA...GGCGAACTTAGTGGACTTAATTTGTATATGTTCTCCAGTTAGATCAGACTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184867.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp CCACAGATAGAGTCTGATCTAACTGGAGAACATATACAAATTAAGTCCACTAAGACATTGGCGGAAGACTaGTGTTTATGTCTGTTGGTG +
Preference number: 5 (lower is better)
Translates to: PQIESDLTGEHIQIKSTKTLAED*CLCLLV
Trigger: CACCAACAGACATAAACACAAGTCTTCCGCCAATGT...CTTAGTGGACTTAATTTGTATATGTTCTCCAGTTAGATCAGACTCTATCTGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp GAACTGGTATCCAAACCAGAAACCAGTATTGCTTCTAGCTTTTGTCATTTAACAGTCTTCTTCTCGAACTaGTGGCAGAGAATGAGTAGN +
Preference number: 5 (lower is better)
Translates to: ELVSKPETSIASSFCHLTVFFSN*WQRMSX
Trigger: NCTACTCATTCTCTGCCACAAGTTCGAGAAGAAGAC...TGTTAAATGACAAAAGCTAGAAGCAATACTGGTTTCTGGTTTGGATACCAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184029.2
CDS-3UTR CAA 90 bp TACTTATCAGCTAACACTTTACAAGTACTATATTGTGTAGTACTTACTGCTCGGGTCTTCTTCTCGAACTaGTGGCAGAGAATGAGTAGT +
Preference number: 5 (lower is better)
Translates to: YLSANTLQVLYCVVLTARVFFSN*WQRMSS
Trigger: ACTACTCATTCTCTGCCACAAGTTCGAGAAGAAGAC...CCGAGCAGTAAGTACTACACAATATAGTACTTGTAAAGTGTTAGCTGATAAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp CTTGTAAGTTACACTTCTTGCTATTATAGCTTTACTATGAAACCTAGAAGCCTGCTAGGAGATTCACGGTaGAAATCGTCAGAATTTGGG +
Preference number: 5 (lower is better)
Translates to: LVSYTSCYYSFTMKPRSLLGDSR*KSSEFG
Trigger: CCCAAATTCTGACGATTTCAACCGTGAATCTCCTAG...CAGGCTTCTAGGTTTCATAGTAAAGCTATAATAGCAAGAAGTGTAACTTACAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183918.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS-3UTR CAA 90 bp CAACATGTCTCACTCAGTTTTCGATATTTACTCTTCCTGTTGGTAATACTATGTAAGCACTGCCTGAATTaGTGCACAGATACTCCTGTT +
Preference number: 5 (lower is better)
Translates to: QHVSLSFRYLLFLLVILCKHCLN*CTDTPV
Trigger: AACAGGAGTATCTGTGCACAAATTCAGGCAGTGCTT...ACATAGTATTACCAACAGGAAGAGTAAATATCGAAAACTGAGTGAGACATGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184029.2
CDS TCA 72 bp GTTCCTCCACGCTCATCCATACCTGACCCGCTGAACTaGCTACTTCCCAGTGTTGTTGGTCTCGTTTTCCCA +
Preference number: 6 (lower is better)
Translates to: VPPRSSIPDPLN*LLPSVVGLVFP
Trigger: TGGGAAAACGAGACCAACAACACTGGGAAGTAGTCAGTTCAGCGGGTCAGGTATGGATGAGCGTGGAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183492.8
ENSMUST00000183992.8
ENSMUST00000184107.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS CAA 90 bp CTGACAGCTCTGGCTGGCTCTAACAACTGTGTGGTAGTGCTTACCTaGCATAAAGAAAGTGCTAGCGAACATACTGGTTGGTGGCTTGGG +
Preference number: 6 (lower is better)
Translates to: LTALAGSNNCVVVLT*HKESASEHTGWWLG
Trigger: CCCAAGCCACCAACCAGTATGTTCGCTAGCACTTTCTTTATGCAAGGTAAGCACTACCACACAGTTGTTAGAGCCAGCCAGAGCTGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184029.2
CDS TCA 72 bp ATGTTGTTCCTCCACGCTCATCCATACCTGACCCGCTaGACTGACTACTTCCCAGTGTTGTTGGTCTCGTTT +
Preference number: 6 (lower is better)
Translates to: MLFLHAHPYLTR*TDYFPVLLVSF
Trigger: AAACGAGACCAACAACACTGGGAAGTAGTCAGTTCAGCGGGTCAGGTATGGATGAGCGTGGAGGAACAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183492.8
ENSMUST00000183992.8
ENSMUST00000184107.8
ENSMUST00000184783.8
ENSMUST00000185117.8
CDS TCA 72 bp TGCTTCATCTCCTGTTTTGTACCTGACCCGCTGAACTaGCTACTTCCCAGTGTTGTTGGTCTCGTTTTCCCA +
Preference number: 6 (lower is better)
Translates to: CFISCFVPDPLN*LLPSVVGLVFP
Trigger: TGGGAAAACGAGACCAACAACACTGGGAAGTAGTCAGTTCAGCGGGTCAGGTACAAAACAGGAGATGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184523.8
CDS CCA 72 bp CAGTGTTGTTGGTCTCGTTTTCCCACTATTAACAGGTaGAGAAAACATCGCACTGAAGTCCAGCAGGTCGCT +
Preference number: 6 (lower is better)
Translates to: QCCWSRFPTINR*RKHRTEVQQVA
Trigger: AGCGACCTGCTGGACTTCAGTGCGATGTTTTCTCCACCTGTTAATAGTGGGAAAACGAGACCAACAACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000034755.13
ENSMUST00000183404.8
ENSMUST00000183492.8
ENSMUST00000183594.2
ENSMUST00000183992.8
ENSMUST00000184107.8
ENSMUST00000184523.8
ENSMUST00000184783.8
ENSMUST00000184867.8
ENSMUST00000185117.8
CDS CCA 72 bp GTAACTAGGAGATTCACGGTTGAAATCGTCAGAATTTaGGGATGGTGCATATACCGTTTTCCCATTGTAGTA +
Preference number: 6 (lower is better)
Translates to: VTRRFTVEIVRI*GWCIYRFPIVV
Trigger: TACTACAATGGGAAAACGGTATATGCACCATCCCCAAATTCTGACGATTTCAACCGTGAATCTCCTAGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000183918.8
ENSMUST00000184448.8