Pregenerated sensors for TCERG1L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000091002Ensembl transcript IDs: ENSMUST00000160436.2
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACCTGCACCCCTGGCTGCCTGGAATGGGCAGAGCAGCCGGCCACTaGCACCTAAGTTCCTCCAAGCGCACACTCAGCTGCCTGCTGTCA | + |
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Preference number: 1 (lower is better) Translates to: HLHPWLPGMGRAAGH*HLSSSKRTLSCLLS Trigger: TGACAGCAGGCAGCTGAGTGTGCGCTTGGAGGAACTTAGGTGGCAGTGGCCGGCTGCTCTGCCCATTCCAGGCAGCCAGGGGTGCAGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| 3UTR GCA 90 bp | GTGGAGTGGAGGCAACACCTCGAGACGATTATCCGCATTTCCTGCTaGTGCTTTGCCACAGACCTGCAGTGGGTTTGTAATTTGTGTATA | + |
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Preference number: 1 (lower is better) Translates to: VEWRQHLETIIRISC*CFATDLQWVCNLCI Trigger: TATACACAAATTACAAACCCACTGCAGGTCTGTGGCAAAGCAGCAGCAGGAAATGCGGATAATCGTCTCGAGGTGTTGCCTCCACTCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| 3UTR TCA 90 bp | AACAATGTACAAAAGAGGGAGCTTCAATATGAAACAGTAATTCTCTaGGAACACCTGCACCCCTGGCTGCCTGGAATGGGCAGAGCAGCC | + |
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Preference number: 1 (lower is better) Translates to: NNVQKRELQYETVIL*EHLHPWLPGMGRAA Trigger: GGCTGCTCTGCCCATTCCAGGCAGCCAGGGGTGCAGGTGTTCTCAGAGAATTACTGTTTCATATTGAAGCTCCCTCTTTTGTACATTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| 3UTR GCA 90 bp | GAGTGGAGGCAACACCTCGAGACGATTATCCGCATTTCCTGCTGCTaGTTTGCCACAGACCTGCAGTGGGTTTGTAATTTGTGTATATTA | + |
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Preference number: 1 (lower is better) Translates to: EWRQHLETIIRISCC*FATDLQWVCNLCIL Trigger: TAATATACACAAATTACAAACCCACTGCAGGTCTGTGGCAAAGCAGCAGCAGGAAATGCGGATAATCGTCTCGAGGTGTTGCCTCCACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| 3UTR-3UTR GCA 90 bp | GCCAGCATGGCTCCCTTCTCCTGGTGGGGATACACCTTCAGAGAAGCCAGTCACTTCCTGCTGCTGCTTTaGCACAGACCTGCAGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: ASMAPFSWWGYTFREASHFLLLL*HRPAVG Trigger: ACCCACTGCAGGTCTGTGGCAAAGCAGCAGCAGGAA...GTGACTGGCTTCTCTGAAGGTGTATCCCCACCAGGAGAAGGGAGCCATGCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| 3UTR-3UTR GCA 90 bp | CTGACAGCCAGCATGGCTCCCTTCTCCTGGTGGGGATACACCTTCAGAGAAGCCGCACACTCAGCTGCCTaGTGTCATACCGTGTTTGCA | + |
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Preference number: 2 (lower is better) Translates to: LTASMAPFSWWGYTFREAAHSAA*CHTVFA Trigger: TGCAAACACGGTATGACAGCAGGCAGCTGAGTGTGC...GGCTTCTCTGAAGGTGTATCCCCACCAGGAGAAGGGAGCCATGCTGGCTGTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| 3UTR-3UTR CCA 90 bp | GAACCCATTTCTACTACTCAGGAAACAAGGGGCCTTGATCTAGGAACACCACGGCCTGGCTGCCTGGAATaGGCAGAGCAGCCGGCCACT | + |
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Preference number: 2 (lower is better) Translates to: EPISTTQETRGLDLGTPRPGCLE*AEQPAT Trigger: AGTGGCCGGCTGCTCTGCCCATTCCAGGCAGCCAGG...CCGTGGTGTTCCTAGATCAAGGCCCCTTGTTTCCTGAGTAGTAGAAATGGGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| 3UTR-3UTR CCA 90 bp | GTCACTCTTAGTCACCTGCAAGTGATCACGATTCACAAGGGTGTCAAATGTCCGGAACACCTGCACCCCTaGCTGCCTGGAATGGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: VTLSHLQVITIHKGVKCPEHLHP*LPGMGR Trigger: TCTGCCCATTCCAGGCAGCCAGGGGTGCAGGTGTTC...CGGACATTTGACACCCTTGTGAATCGTGATCACTTGCAGGTGACTAAGAGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| 3UTR-3UTR GCA 90 bp | GTCACTCTTAGTCACCTGCAAGTGATCACGATTCACAAGGGTGTCAAATGTCCGAGAGCAGCCGGCCACTaGCACCTAAGTTCCTCCAAG | + |
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Preference number: 2 (lower is better) Translates to: VTLSHLQVITIHKGVKCPRAAGH*HLSSSK Trigger: CTTGGAGGAACTTAGGTGGCAGTGGCCGGCTGCTCT...CGGACATTTGACACCCTTGTGAATCGTGATCACTTGCAGGTGACTAAGAGTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGTCACTCTTAGTCACCTGCAAGTGATCACGATTCACAAGGGTGTCAAATGTTTCTCTGAGAACACCTaGACCCCTGGCTGCCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: PVTLSHLQVITIHKGVKCFSENT*TPGCLE Trigger: TTCCAGGCAGCCAGGGGTGCAGGTGTTCTCAGAGAA...ACATTTGACACCCTTGTGAATCGTGATCACTTGCAGGTGACTAAGAGTGACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| 3UTR-3UTR GCA 90 bp | CCTTCTCCTGGTGGGGATACACCTTCAGAGAAGCCAGTCACTCTTAGTCACCTGGCTTTGCCACAGACCTaGAGTGGGTTTGTAATTTGT | + |
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Preference number: 2 (lower is better) Translates to: PSPGGDTPSEKPVTLSHLALPQT*SGFVIC Trigger: ACAAATTACAAACCCACTGCAGGTCTGTGGCAAAGC...CAGGTGACTAAGAGTGACTGGCTTCTCTGAAGGTGTATCCCCACCAGGAGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| 3UTR CAA 90 bp | GGAGGCAACACCTCGAGACGATTATCCGCATTTCCTGCTGCTGCTTaGCCACAGACCTGCAGTGGGTTTGTAATTTGTGTATATTACAAG | + |
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Preference number: 2 (lower is better) Translates to: GGNTSRRLSAFPAAA*PQTCSGFVICVYYK Trigger: CTTGTAATATACACAAATTACAAACCCACTGCAGGTCTGTGGCAAAGCAGCAGCAGGAAATGCGGATAATCGTCTCGAGGTGTTGCCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| 3UTR-3UTR TCA 90 bp | GTTGTCACTGTGATGAATAATGGAACCCATTTCTACTACTCAGGAAACAAGGGGGAAACAGTAATTCTCTaGGAACACCTGCACCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: VVTVMNNGTHFYYSGNKGETVIL*EHLHPW Trigger: CCAGGGGTGCAGGTGTTCTCAGAGAATTACTGTTTC...CCCCTTGTTTCCTGAGTAGTAGAAATGGGTTCCATTATTCATCACAGTGACAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| 3UTR CCA 72 bp | AGTAATTCTCTGAGAACACCTGCACCCCTGGCTGCCTaGAATGGGCAGAGCAGCCGGCCACTGCCACCTAAG | + |
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Preference number: 3 (lower is better) Translates to: SNSLRTPAPLAA*NGQSSRPLPPK Trigger: CTTAGGTGGCAGTGGCCGGCTGCTCTGCCCATTCCAGGCAGCCAGGGGTGCAGGTGTTCTCAGAGAATTACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| 3UTR TCA 72 bp | GGAACCCATTTCTACTACTCAGGAAACAAGGGGCCTTaGTCTAGGAACACCACGGGAGGCCTGCACAAAAGG | + |
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Preference number: 3 (lower is better) Translates to: GTHFYYSGNKGP*SRNTTGGLHKR Trigger: CCTTTTGTGCAGGCCTCCCGTGGTGTTCCTAGATCAAGGCCCCTTGTTTCCTGAGTAGTAGAAATGGGTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| CDS-3UTR GCA 90 bp | CCTCGAGACGATTATCCGCATTTCCTGCTGCTGCTTTGCCACAGACCTGCAGTGGGGGCGGAGGCAGGCTaGGCCGAGGCCAACAGCACC | + |
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Preference number: 4 (lower is better) Translates to: PRDDYPHFLLLLCHRPAVGAEAG*AEANST Trigger: GGTGCTGTTGGCCTCGGCGCAGCCTGCCTCCGCCCC...CACTGCAGGTCTGTGGCAAAGCAGCAGCAGGAAATGCGGATAATCGTCTCGAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| CDS-3UTR GCA 90 bp | CCTCGAGACGATTATCCGCATTTCCTGCTGCTGCTTTGCCACAGACCTGCAGTGTGCCGCCACCGGGGCTaGTGGGGCTGCTGTAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: PRDDYPHFLLLLCHRPAVCRHRG*WGCCSC Trigger: GCAGCTACAGCAGCCCCAGCAGCCCCGGTGGCGGCA...CACTGCAGGTCTGTGGCAAAGCAGCAGCAGGAAATGCGGATAATCGTCTCGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| CDS-3UTR CCA 90 bp | GCTGCCTGGAATGGGCAGAGCAGCCGGCCACTGCCACCTAAGTTCCTCCAAGCGAGGCGTGGAGGCCACTaGTTTATTGCCTTTCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: AAWNGQSSRPLPPKFLQARRGGH*FIAFRC Trigger: GCAGCGAAAGGCAATAAACCAGTGGCCTCCACGCCT...CGCTTGGAGGAACTTAGGTGGCAGTGGCCGGCTGCTCTGCCCATTCCAGGCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| CDS-3UTR CCA 90 bp | GCCAGCATGGCTCCCTTCTCCTGGTGGGGATACACCTTCAGAGAAGCCAGTCACGGGCAGGAGAATCTGTaGGGGTGGTGTCTGCGGTCC | + |
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Preference number: 4 (lower is better) Translates to: ASMAPFSWWGYTFREASHGQENL*GWCLRS Trigger: GGACCGCAGACACCACCCCCACAGATTCTCCTGCCC...GTGACTGGCTTCTCTGAAGGTGTATCCCCACCAGGAGAAGGGAGCCATGCTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| CDS-3UTR TCA 90 bp | AGAACACCTGCACCCCTGGCTGCCTGGAATGGGCAGAGCAGCCGGCCACTGCCAGGCTTAAGACTGTCATaGCAACCACCTGGTATGGGT | + |
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Preference number: 4 (lower is better) Translates to: RTPAPLAAWNGQSSRPLPGLRLS*QPPGMG Trigger: ACCCATACCAGGTGGTTGTCATGACAGTCTTAAGCC...TGGCAGTGGCCGGCTGCTCTGCCCATTCCAGGCAGCCAGGGGTGCAGGTGTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| CDS-3UTR CCA 90 bp | GCAGCCGGCCACTGCCACCTAAGTTCCTCCAAGCGCACACTCAGCTGCCTGCTGGGGCCTGGACAGAGATaGAGTTACTTGGTTTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: AAGHCHLSSSKRTLSCLLGPGQR*SYLVCQ Trigger: CTGGCAAACCAAGTAACTCCATCTCTGTCCAGGCCC...CAGCAGGCAGCTGAGTGTGCGCTTGGAGGAACTTAGGTGGCAGTGGCCGGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| CDS-3UTR GCA 90 bp | GCAGCCGGCCACTGCCACCTAAGTTCCTCCAAGCGCACACTCAGCTGCCTGCTGCACGGCTGTGCTCTTTaGCTTTATCTGAGAATGGGG | + |
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Preference number: 4 (lower is better) Translates to: AAGHCHLSSSKRTLSCLLHGCAL*LYLRMG Trigger: CCCCATTCTCAGATAAAGGCAAAGAGCACAGCCGTG...CAGCAGGCAGCTGAGTGTGCGCTTGGAGGAACTTAGGTGGCAGTGGCCGGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| CDS-3UTR TCA 90 bp | TGGAATGGGCAGAGCAGCCGGCCACTGCCACCTAAGTTCCTCCAAGCGCACACTGCTGCATGGTCGGGTTaGAGAAGAAAACCCGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: WNGQSSRPLPPKFLQAHTAAWSG*RRKPGH Trigger: ATGACCGGGTTTTCTTCTTCAACCCGACCATGCAGC...AGTGTGCGCTTGGAGGAACTTAGGTGGCAGTGGCCGGCTGCTCTGCCCATTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| CDS-3UTR GCA 90 bp | AAGTTCCTCCAAGCGCACACTCAGCTGCCTGCTGTCATACCGTGTTTGCACGGAAGGAAGTGGCACGGCTaGATGATGGAGGGGCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: KFLQAHTQLPAVIPCLHGRKWHG*MMEGLR Trigger: CCTGAGCCCCTCCATCATGCAGCCGTGCCACTTCCT...TCCGTGCAAACACGGTATGACAGCAGGCAGCTGAGTGTGCGCTTGGAGGAACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| CDS-3UTR TCA 90 bp | CTGACAGCCAGCATGGCTCCCTTCTCCTGGTGGGGATACACCTTCAGAGAAGCCACTGCTTTCAGTTGCTaGGGCCTCCAGCTTGCGTTT | + |
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Preference number: 4 (lower is better) Translates to: LTASMAPFSWWGYTFREATAFSC*GLQLAF Trigger: AAACGCAAGCTGGAGGCCTCAGCAACTGAAAGCAGT...GGCTTCTCTGAAGGTGTATCCCCACCAGGAGAAGGGAGCCATGCTGGCTGTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| CDS-3UTR CCA 90 bp | TGGAATGGGCAGAGCAGCCGGCCACTGCCACCTAAGTTCCTCCAAGCGCACACTTGCCATCATCTGAGCTaGAACCATCACTGCTTTCAG | + |
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Preference number: 4 (lower is better) Translates to: WNGQSSRPLPPKFLQAHTCHHLS*NHHCFQ Trigger: CTGAAAGCAGTGATGGTTCCAGCTCAGATGATGGCA...AGTGTGCGCTTGGAGGAACTTAGGTGGCAGTGGCCGGCTGCTCTGCCCATTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| CDS-3UTR CCA 90 bp | CCACTGCCACCTAAGTTCCTCCAAGCGCACACTCAGCTGCCTGCTGTCATACCGGACAACCACCTGGTATaGGTTGAGCTGCTAATACCA | + |
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Preference number: 4 (lower is better) Translates to: PLPPKFLQAHTQLPAVIPDNHLV*VELLIP Trigger: TGGTATTAGCAGCTCAACCCATACCAGGTGGTTGTC...CGGTATGACAGCAGGCAGCTGAGTGTGCGCTTGGAGGAACTTAGGTGGCAGTGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| CDS-3UTR TCA 90 bp | AAGTTCCTCCAAGCGCACACTCAGCTGCCTGCTGTCATACCGTGTTTGCACGGACCTATGGATGGAGAATaGCCACCAAACAGCCACTGT | + |
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Preference number: 4 (lower is better) Translates to: KFLQAHTQLPAVIPCLHGPMDGE*PPNSHC Trigger: ACAGTGGCTGTTTGGTGGTCATTCTCCATCCATAGG...TCCGTGCAAACACGGTATGACAGCAGGCAGCTGAGTGTGCGCTTGGAGGAACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| CDS-3UTR TCA 90 bp | GAACCCATTTCTACTACTCAGGAAACAAGGGGCCTTGATCTAGGAACACCACGGTGGCTTCTCCCAGACTaGCAGCTGCATGGTCGGGTT | + |
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Preference number: 4 (lower is better) Translates to: EPISTTQETRGLDLGTPRWLLPD*QLHGRV Trigger: AACCCGACCATGCAGCTGTCAGTCTGGGAGAAGCCA...CCGTGGTGTTCCTAGATCAAGGCCCCTTGTTTCCTGAGTAGTAGAAATGGGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| CDS-3UTR GCA 90 bp | GTCACTCTTAGTCACCTGCAAGTGATCACGATTCACAAGGGTGTCAAATGTCCGCTGAGGCCTCCAGCTTaGGTTTGTGGGGTGGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: VTLSHLQVITIHKGVKCPLRPPA*VCGVGP Trigger: AGGACCCACCCCACAAACGCAAGCTGGAGGCCTCAG...CGGACATTTGACACCCTTGTGAATCGTGATCACTTGCAGGTGACTAAGAGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| CDS-3UTR CCA 90 bp | GTTGTCACTGTGATGAATAATGGAACCCATTTCTACTACTCAGGAAACAAGGGGTGGTGCACGGCGGCGTaGTCTGGCGCAGAGGACAGC | + |
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Preference number: 4 (lower is better) Translates to: VVTVMNNGTHFYYSGNKGWCTAA*SGAEDS Trigger: GCTGTCCTCTGCGCCAGACCACGCCGCCGTGCACCA...CCCCTTGTTTCCTGAGTAGTAGAAATGGGTTCCATTATTCATCACAGTGACAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| CDS-3UTR CCA 90 bp | AAGTTCCTCCAAGCGCACACTCAGCTGCCTGCTGTCATACCGTGTTTGCACGGACTTGCGTTTGTGGGGTaGGTCCTCGATGATTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: KFLQAHTQLPAVIPCLHGLAFVG*VLDDSL Trigger: AAGAGAATCATCGAGGACCCACCCCACAAACGCAAG...TCCGTGCAAACACGGTATGACAGCAGGCAGCTGAGTGTGCGCTTGGAGGAACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| CDS-3UTR TCA 90 bp | CCTTCTCCTGGTGGGGATACACCTTCAGAGAAGCCAGTCACTCTTAGTCACCTGCTCTTTGCCTTTATCTaGGAATGGGGCAGTCCGGAA | + |
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Preference number: 4 (lower is better) Translates to: PSPGGDTPSEKPVTLSHLLFAFI*EWGSPE Trigger: TTCCGGACTGCCCCATTCTCAGATAAAGGCAAAGAG...CAGGTGACTAAGAGTGACTGGCTTCTCTGAAGGTGTATCCCCACCAGGAGAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| CDS-3UTR GCA 90 bp | CCTTCTCCTGGTGGGGATACACCTTCAGAGAAGCCAGTCACTCTTAGTCACCTGCACTTTGGTCCTCACTaGCATCATCTGAGCTGGAAC | + |
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Preference number: 4 (lower is better) Translates to: PSPGGDTPSEKPVTLSHLHFGPH*HHLSWN Trigger: GTTCCAGCTCAGATGATGGCAGTGAGGACCAAAGTG...CAGGTGACTAAGAGTGACTGGCTTCTCTGAAGGTGTATCCCCACCAGGAGAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| CDS-3UTR GCA 90 bp | AAGTTCCTCCAAGCGCACACTCAGCTGCCTGCTGTCATACCGTGTTTGCACGGATTTATTGCCTTTCGCTaGAGTTTCCTCCCCTCTTAC | + |
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Preference number: 4 (lower is better) Translates to: KFLQAHTQLPAVIPCLHGFIAFR*SFLPSY Trigger: GTAAGAGGGGAGGAAACTGCAGCGAAAGGCAATAAA...TCCGTGCAAACACGGTATGACAGCAGGCAGCTGAGTGTGCGCTTGGAGGAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| CDS-3UTR CCA 90 bp | GAACCCATTTCTACTACTCAGGAAACAAGGGGCCTTGATCTAGGAACACCACGGAGGCAGGAGTGGGCCTaGACAGAGATGGAGTTACTT | + |
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Preference number: 4 (lower is better) Translates to: EPISTTQETRGLDLGTPRRQEWA*TEMELL Trigger: AAGTAACTCCATCTCTGTCCAGGCCCACTCCTGCCT...CCGTGGTGTTCCTAGATCAAGGCCCCTTGTTTCCTGAGTAGTAGAAATGGGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| CDS-3UTR CCA 90 bp | AAGTTCCTCCAAGCGCACACTCAGCTGCCTGCTGTCATACCGTGTTTGCACGGACAGTCCTGTTCCTCTTaGTTTTCACACTTTGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: KFLQAHTQLPAVIPCLHGQSCSS*FSHFGP Trigger: AGGACCAAAGTGTGAAAACCAAGAGGAACAGGACTG...TCCGTGCAAACACGGTATGACAGCAGGCAGCTGAGTGTGCGCTTGGAGGAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| CDS-3UTR TCA 90 bp | AAGCCAGTCACTCTTAGTCACCTGCAAGTGATCACGATTCACAAGGGTGTCAAATCCGGAAGGGGATTCTaGTGGGGGTCAATGTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: KPVTLSHLQVITIHKGVKSGRGF*WGSMSG Trigger: TCCTGACATTGACCCCCATCAGAATCCCCTTCCGGA...TTTGACACCCTTGTGAATCGTGATCACTTGCAGGTGACTAAGAGTGACTGGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| CDS-3UTR TCA 90 bp | GATACACCTTCAGAGAAGCCAGTCACTCTTAGTCACCTGCAAGTGATCACGATTGGTCCCTTGTCCACTTaGTGGGTGTCTTCTGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: DTPSEKPVTLSHLQVITIGPLST*WVSSGP Trigger: TGGACCAGAAGACACCCATCAAGTGGACAAGGGACC...AATCGTGATCACTTGCAGGTGACTAAGAGTGACTGGCTTCTCTGAAGGTGTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| CDS-3UTR GCA 90 bp | ATAATGGAACCCATTTCTACTACTCAGGAAACAAGGGGCCTTGATCTAGGAACAGACCATGGCAGTAGCTaGAGCAGCAGCTGTGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: IMEPISTTQETRGLDLGTDHGSS*SSSCGS Trigger: GCTGCCACAGCTGCTGCTGCAGCTACTGCCATGGTC...TGTTCCTAGATCAAGGCCCCTTGTTTCCTGAGTAGTAGAAATGGGTTCCATTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| CDS-3UTR GCA 90 bp | GACAGCCAGCATGGCTCCCTTCTCCTGGTGGGGATACACCTTCAGAGAAGCCAGCTTGTCTTGACAAACTaGTCGAATATCTGTTTTCGT | + |
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Preference number: 4 (lower is better) Translates to: DSQHGSLLLVGIHLQRSQLVLTN*SNICFR Trigger: ACGAAAACAGATATTCGAGCAGTTTGTCAAGACAAG...CTGGCTTCTCTGAAGGTGTATCCCCACCAGGAGAAGGGAGCCATGCTGGCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| CDS-3UTR CCA 90 bp | AAGTTCCTCCAAGCGCACACTCAGCTGCCTGCTGTCATACCGTGTTTGCACGGATTGGTTTTCACACTTTaGTCCTCACTGCCATCATCT | + |
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Preference number: 4 (lower is better) Translates to: KFLQAHTQLPAVIPCLHGLVFTL*SSLPSS Trigger: AGATGATGGCAGTGAGGACCAAAGTGTGAAAACCAA...TCCGTGCAAACACGGTATGACAGCAGGCAGCTGAGTGTGCGCTTGGAGGAACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| CDS-3UTR GCA 90 bp | CCAGTCACTCTTAGTCACCTGCAAGTGATCACGATTCACAAGGGTGTCAAATGTTCCCAGACTGACAGCTaGATGGTCGGGTTGAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: PVTLSHLQVITIHKGVKCSQTDS*MVGLKK Trigger: CTTCTTCAACCCGACCATGCAGCTGTCAGTCTGGGA...ACATTTGACACCCTTGTGAATCGTGATCACTTGCAGGTGACTAAGAGTGACTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| 3UTR CAA 72 bp | ACCTCGAGACGATTATCCGCATTTCCTGCTGCTGCTTaGCCACAGACCTGCAGTGGGTTTGTAATTTGTGTA | + |
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Preference number: 4 (lower is better) Translates to: TSRRLSAFPAAA*PQTCSGFVICV Trigger: TACACAAATTACAAACCCACTGCAGGTCTGTGGCAAAGCAGCAGCAGGAAATGCGGATAATCGTCTCGAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| CDS-3UTR TCA 90 bp | GATACACCTTCAGAGAAGCCAGTCACTCTTAGTCACCTGCAAGTGATCACGATTTTTCCCAACAGGAGGTaGCAGAGTAGAAGGACAGAC | + |
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Preference number: 4 (lower is better) Translates to: DTPSEKPVTLSHLQVITIFPNRR*QSRRTD Trigger: GTCTGTCCTTCTACTCTGTCACCTCCTGTTGGGAAA...AATCGTGATCACTTGCAGGTGACTAAGAGTGACTGGCTTCTCTGAAGGTGTATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| CDS-3UTR CCA 90 bp | GTTGTCACTGTGATGAATAATGGAACCCATTTCTACTACTCAGGAAACAAGGGGTCCAGCTTGCGTTTGTaGGGTGGGTCCTCGATGATT | + |
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Preference number: 4 (lower is better) Translates to: VVTVMNNGTHFYYSGNKGSSLRL*GGSSMI Trigger: AATCATCGAGGACCCACCCCACAAACGCAAGCTGGA...CCCCTTGTTTCCTGAGTAGTAGAAATGGGTTCCATTATTCATCACAGTGACAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| CDS-3UTR CCA 90 bp | ATAATGGAACCCATTTCTACTACTCAGGAAACAAGGGGCCTTGATCTAGGAACAAGGGGGCTAGTCCTATaGATGGAGAATGACCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: IMEPISTTQETRGLDLGTRGLVL*MENDHQ Trigger: TTGGTGGTCATTCTCCATCCATAGGACTAGCCCCCT...TGTTCCTAGATCAAGGCCCCTTGTTTCCTGAGTAGTAGAAATGGGTTCCATTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS-3UTR CCA 90 bp | GCAATTAGAAATGCATCAAACGGGGAACAATGTACAAAAGAGGGAGCTTCAATAATCCAGGCACAGGCGTaGAGGCCACTGGTTTATTGC | + |
|
Preference number: 4 (lower is better) Translates to: AIRNASNGEQCTKEGASIIQAQA*RPLVYC Trigger: GCAATAAACCAGTGGCCTCCACGCCTGTGCCTGGAT...TATTGAAGCTCCCTCTTTTGTACATTGTTCCCCGTTTGATGCATTTCTAATTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS-3UTR GCA 90 bp | GCAATTAGAAATGCATCAAACGGGGAACAATGTACAAAAGAGGGAGCTTCAATAAGCTGGAACCATCACTaGTTTCAGTTGCTGAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: AIRNASNGEQCTKEGASISWNHH*FQLLRP Trigger: AGGCCTCAGCAACTGAAAGCAGTGATGGTTCCAGCT...TATTGAAGCTCCCTCTTTTGTACATTGTTCCCCGTTTGATGCATTTCTAATTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS-3UTR CCA 90 bp | GCAATTAGAAATGCATCAAACGGGGAACAATGTACAAAAGAGGGAGCTTCAATAAGAAGGACAGACATGTaGGAAAAGGGGCACCAACTC | + |
|
Preference number: 4 (lower is better) Translates to: AIRNASNGEQCTKEGASIRRTDM*EKGHQL Trigger: GAGTTGGTGCCCCTTTTCCCACATGTCTGTCCTTCT...TATTGAAGCTCCCTCTTTTGTACATTGTTCCCCGTTTGATGCATTTCTAATTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS-3UTR CCA 90 bp | GCAATTAGAAATGCATCAAACGGGGAACAATGTACAAAAGAGGGAGCTTCAATATCTTACCAATATGGGTaGAGGCTCCTTATCCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: AIRNASNGEQCTKEGASISYQYG*RLLILL Trigger: AAGGAGGATAAGGAGCCTCCACCCATATTGGTAAGA...TATTGAAGCTCCCTCTTTTGTACATTGTTCCCCGTTTGATGCATTTCTAATTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS CCA 90 bp | CAGCCCGGCGGTGCCGGGGACCATCCAAACCCAGGGCGGTGGCGGTaGGTCTGCATTCATCGGCCACGGGAGAGGCTGCCGCCACCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: QPGGAGDHPNPGRWR*VCIHRPRERLPPPG Trigger: CCCCGGTGGCGGCAGCCTCTCCCGTGGCCGATGAATGCAGACCCACCGCCACCGCCCTGGGTTTGGATGGTCCCCGGCACCGCCGGGCTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS GCA 90 bp | GGCGGTGCCGGGGACCATCCAAACCCAGGGCGGTGGCGGTGGGTCTaGATTCATCGGCCACGGGAGAGGCTGCCGCCACCGGGGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GGAGDHPNPGRWRWV*IHRPRERLPPPGLL Trigger: CAGCAGCCCCGGTGGCGGCAGCCTCTCCCGTGGCCGATGAATGCAGACCCACCGCCACCGCCCTGGGTTTGGATGGTCCCCGGCACCGCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS CCA 90 bp | CCGGAGCAGCCCGGCGGTGCCGGGGACCATCCAAACCCAGGGCGGTaGCGGTGGGTCTGCATTCATCGGCCACGGGAGAGGCTGCCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PEQPGGAGDHPNPGR*RWVCIHRPRERLPP Trigger: TGGCGGCAGCCTCTCCCGTGGCCGATGAATGCAGACCCACCGCCACCGCCCTGGGTTTGGATGGTCCCCGGCACCGCCGGGCTGCTCCGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS-3UTR CAA 90 bp | GCAGCCGGCCACTGCCACCTAAGTTCCTCCAAGCGCACACTCAGCTGCCTGCTGCCGGGTACATCCAGGTaGAGTCCAGAGCAAAGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: AAGHCHLSSSKRTLSCLLPGTSR*SPEQRG Trigger: ACCCCTTTGCTCTGGACTCAACCTGGATGTACCCGG...CAGCAGGCAGCTGAGTGTGCGCTTGGAGGAACTTAGGTGGCAGTGGCCGGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS-3UTR CAA 90 bp | CTGACAGCCAGCATGGCTCCCTTCTCCTGGTGGGGATACACCTTCAGAGAAGCCGCTGAGGCCTCCAGCTaGCGTTTGTGGGGTGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LTASMAPFSWWGYTFREAAEASS*RLWGGS Trigger: GGACCCACCCCACAAACGCAAGCTGGAGGCCTCAGC...GGCTTCTCTGAAGGTGTATCCCCACCAGGAGAAGGGAGCCATGCTGGCTGTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS-3UTR CAA 90 bp | AGAACACCTGCACCCCTGGCTGCCTGGAATGGGCAGAGCAGCCGGCCACTGCCACATCACTGCTTTCAGTaGCTGAGGCCTCCAGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: RTPAPLAAWNGQSSRPLPHHCFQ*LRPPAC Trigger: GCAAGCTGGAGGCCTCAGCAACTGAAAGCAGTGATG...TGGCAGTGGCCGGCTGCTCTGCCCATTCCAGGCAGCCAGGGGTGCAGGTGTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS TCA 90 bp | GGCAGGAGAATCTGTGGGGGTGGTGTCTGCGGTCCCTTGTCCACTTaGTGGGTGTCTTCTGGTCCAGGGCCCTCGCAGCTTTCAGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GRRICGGGVCGPLST*WVSSGPGPSQLSVL Trigger: CAGGACTGAAAGCTGCGAGGGCCCTGGACCAGAAGACACCCATCAAGTGGACAAGGGACCGCAGACACCACCCCCACAGATTCTCCTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS CCA 90 bp | GAAATGGGTCACACGCTCTTCCAGGGGCAGGAGAATCTGTGGGGGTaGTGTCTGCGGTCCCTTGTCCACTTGATGGGTGTCTTCTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: EMGHTLFQGQENLWG*CLRSLVHLMGVFWS Trigger: GGACCAGAAGACACCCATCAAGTGGACAAGGGACCGCAGACACCACCCCCACAGATTCTCCTGCCCCTGGAAGAGCGTGTGACCCATTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS CCA 90 bp | GTCTCGGAAATGGGTCACACGCTCTTCCAGGGGCAGGAGAATCTGTaGGGGTGGTGTCTGCGGTCCCTTGTCCACTTGATGGGTGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VSEMGHTLFQGQENL*GWCLRSLVHLMGVF Trigger: GAAGACACCCATCAAGTGGACAAGGGACCGCAGACACCACCCCCACAGATTCTCCTGCCCCTGGAAGAGCGTGTGACCCATTTCCGAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS TCA 90 bp | GTAGGTCCACTGGCTTCTCCCAGACTGACAGCTGCATGGTCGGGTTaGAGAAGAAAACCCGGTCATCACCCGTCCAGACCACACACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VGPLASPRLTAAWSG*RRKPGHHPSRPHTR Trigger: CCTGGTGTGTGGTCTGGACGGGTGATGACCGGGTTTTCTTCTTCAACCCGACCATGCAGCTGTCAGTCTGGGAGAAGCCAGTGGACCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS GCA 90 bp | TCCCCACGGTTCTGTAGGTCCACTGGCTTCTCCCAGACTGACAGCTaGATGGTCGGGTTGAAGAAGAAAACCCGGTCATCACCCGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SPRFCRSTGFSQTDS*MVGLKKKTRSSPVQ Trigger: CTGGACGGGTGATGACCGGGTTTTCTTCTTCAACCCGACCATGCAGCTGTCAGTCTGGGAGAAGCCAGTGGACCTACAGAACCGTGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS GCA 90 bp | GGATCCAGGCACAGGCGTGGAGGCCACTGGTTTATTGCCTTTCGCTaGAGTTTCCTCCCCTCTTACCAATATGGGTGGAGGCTCCTTATC | + |
|
Preference number: 5 (lower is better) Translates to: GSRHRRGGHWFIAFR*SFLPSYQYGWRLLI Trigger: GATAAGGAGCCTCCACCCATATTGGTAAGAGGGGAGGAAACTGCAGCGAAAGGCAATAAACCAGTGGCCTCCACGCCTGTGCCTGGATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS CCA 90 bp | AGCAGCTGTGGCAGCAGTGATGGTGATGGTGGGACCCCTGCTGATTaGCTTAAGACTGTCATGACAACCACCTGGTATGGGTTGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSCGSSDGDGGTPAD*LKTVMTTTWYGLSC Trigger: GCAGCTCAACCCATACCAGGTGGTTGTCATGACAGTCTTAAGCCAATCAGCAGGGGTCCCACCATCACCATCACTGCTGCCACAGCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS CCA 90 bp | GAACCATCACTGCTTTCAGTTGCTGAGGCCTCCAGCTTGCGTTTGTaGGGTGGGTCCTCGATGATTCTCTTGAGGTCCCCACGGTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: EPSLLSVAEASSLRL*GGSSMILLRSPRFC Trigger: ACAGAACCGTGGGGACCTCAAGAGAATCATCGAGGACCCACCCCACAAACGCAAGCTGGAGGCCTCAGCAACTGAAAGCAGTGATGGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS GCA 90 bp | TCACACTTTGGTCCTCACTGCCATCATCTGAGCTGGAACCATCACTaGTTTCAGTTGCTGAGGCCTCCAGCTTGCGTTTGTGGGGTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SHFGPHCHHLSWNHH*FQLLRPPACVCGVG Trigger: ACCCACCCCACAAACGCAAGCTGGAGGCCTCAGCAACTGAAAGCAGTGATGGTTCCAGCTCAGATGATGGCAGTGAGGACCAAAGTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS-3UTR CAA 90 bp | GTCACTCTTAGTCACCTGCAAGTGATCACGATTCACAAGGGTGTCAAATGTCCGGCCTCCAGCTTGCGTTaGTGGGGTGGGTCCTCGATG | + |
|
Preference number: 5 (lower is better) Translates to: VTLSHLQVITIHKGVKCPASSLR*WGGSSM Trigger: CATCGAGGACCCACCCCACAAACGCAAGCTGGAGGC...CGGACATTTGACACCCTTGTGAATCGTGATCACTTGCAGGTGACTAAGAGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS CCA 90 bp | TGTCTTCTGGTCCAGGGCCCTCGCAGCTTTCAGTCCTGTTCCTCTTaGTTTTCACACTTTGGTCCTCACTGCCATCATCTGAGCTGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: CLLVQGPRSFQSCSS*FSHFGPHCHHLSWN Trigger: GTTCCAGCTCAGATGATGGCAGTGAGGACCAAAGTGTGAAAACCAAGAGGAACAGGACTGAAAGCTGCGAGGGCCCTGGACCAGAAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS-3UTR CAA 90 bp | GCCAGCATGGCTCCCTTCTCCTGGTGGGGATACACCTTCAGAGAAGCCAGTCACCAGAGATGGAGTTACTaGGTTTGCCAGAAAATGAGT | + |
|
Preference number: 5 (lower is better) Translates to: ASMAPFSWWGYTFREASHQRWSY*VCQKMS Trigger: ACTCATTTTCTGGCAAACCAAGTAACTCCATCTCTG...GTGACTGGCTTCTCTGAAGGTGTATCCCCACCAGGAGAAGGGAGCCATGCTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS CCA 90 bp | TCCTCTTGGTTTTCACACTTTGGTCCTCACTGCCATCATCTGAGCTaGAACCATCACTGCTTTCAGTTGCTGAGGCCTCCAGCTTGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: SSWFSHFGPHCHHLS*NHHCFQLLRPPACV Trigger: AACGCAAGCTGGAGGCCTCAGCAACTGAAAGCAGTGATGGTTCCAGCTCAGATGATGGCAGTGAGGACCAAAGTGTGAAAACCAAGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS-3UTR CAA 90 bp | GTTGTCACTGTGATGAATAATGGAACCCATTTCTACTACTCAGGAAACAAGGGGGCACGGCTGTGCTCTTaGCCTTTATCTGAGAATGGG | + |
|
Preference number: 5 (lower is better) Translates to: VVTVMNNGTHFYYSGNKGARLCS*PLSENG Trigger: CCCATTCTCAGATAAAGGCAAAGAGCACAGCCGTGC...CCCCTTGTTTCCTGAGTAGTAGAAATGGGTTCCATTATTCATCACAGTGACAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS-3UTR CAA 90 bp | ATAATGGAACCCATTTCTACTACTCAGGAAACAAGGGGCCTTGATCTAGGAACAGGCTCCTTATCCTCCTaGTCTCCCACCAAGCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: IMEPISTTQETRGLDLGTGSLSS*SPTKLF Trigger: GAAAAGCTTGGTGGGAGACAAGGAGGATAAGGAGCC...TGTTCCTAGATCAAGGCCCCTTGTTTCCTGAGTAGTAGAAATGGGTTCCATTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS-3UTR CAA 90 bp | GATACACCTTCAGAGAAGCCAGTCACTCTTAGTCACCTGCAAGTGATCACGATTCTTGGTTTTCACACTTaGGTCCTCACTGCCATCATC | + |
|
Preference number: 5 (lower is better) Translates to: DTPSEKPVTLSHLQVITILGFHT*VLTAII Trigger: GATGATGGCAGTGAGGACCAAAGTGTGAAAACCAAG...AATCGTGATCACTTGCAGGTGACTAAGAGTGACTGGCTTCTCTGAAGGTGTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS GCA 90 bp | TCGCTTCTGAACAAGACGAAACCTCTGATCACGGCCGTGTTTCTCTaGAAACTCTTTAAATGTGGTCCTGGGCGATACTTTAGATTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SLLNKTKPLITAVFL*KLFKCGPGRYFRFF Trigger: GAAGAATCTAAAGTATCGCCCAGGACCACATTTAAAGAGTTTGCAGAGAAACACGGCCGTGATCAGAGGTTTCGTCTTGTTCAGAAGCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS GCA 72 bp | GCGCGACCCCGGCGCCAAGCCGGAGCAGCCCGGCGGTaGCGGGGACCATCCAAACCCAGGGCGGTGGCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: ARPRRQAGAARR*RGPSKPRAVAV Trigger: CACCGCCACCGCCCTGGGTTTGGATGGTCCCCGGCACCGCCGGGCTGCTCCGGCTTGGCGCCGGGGTCGCGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS CCA 72 bp | CCCGGCGGTGCCGGGGACCATCCAAACCCAGGGCGGTaGCGGTGGGTCTGCATTCATCGGCCACGGGAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: PGGAGDHPNPGR*RWVCIHRPRER Trigger: CCTCTCCCGTGGCCGATGAATGCAGACCCACCGCCACCGCCCTGGGTTTGGATGGTCCCCGGCACCGCCGGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS CAA 90 bp | GGGCAGGAGAATCTGTGGGGGTGGTGTCTGCGGTCCCTTGTCCACTaGATGGGTGTCTTCTGGTCCAGGGCCCTCGCAGCTTTCAGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GQENLWGWCLRSLVH*MGVFWSRALAAFSP Trigger: AGGACTGAAAGCTGCGAGGGCCCTGGACCAGAAGACACCCATCAAGTGGACAAGGGACCGCAGACACCACCCCCACAGATTCTCCTGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS CCA 72 bp | CACACGCTCTTCCAGGGGCAGGAGAATCTGTGGGGGTaGTGTCTGCGGTCCCTTGTCCACTTGATGGGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: HTLFQGQENLWG*CLRSLVHLMGV Trigger: GACACCCATCAAGTGGACAAGGGACCGCAGACACCACCCCCACAGATTCTCCTGCCCCTGGAAGAGCGTGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS CAA 72 bp | AATCTGTGGGGGTGGTGTCTGCGGTCCCTTGTCCACTaGATGGGTGTCTTCTGGTCCAGGGCCCTCGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: NLWGWCLRSLVH*MGVFWSRALAA Trigger: AGCTGCGAGGGCCCTGGACCAGAAGACACCCATCAAGTGGACAAGGGACCGCAGACACCACCCCCACAGATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS CCA 72 bp | ATGGGTCACACGCTCTTCCAGGGGCAGGAGAATCTGTaGGGGTGGTGTCTGCGGTCCCTTGTCCACTTGATG | + |
|
Preference number: 6 (lower is better) Translates to: MGHTLFQGQENL*GWCLRSLVHLM Trigger: CATCAAGTGGACAAGGGACCGCAGACACCACCCCCACAGATTCTCCTGCCCCTGGAAGAGCGTGTGACCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS CAA 90 bp | GAGGCCTCCAGCTTGCGTTTGTGGGGTGGGTCCTCGATGATTCTCTaGAGGTCCCCACGGTTCTGTAGGTCCACTGGCTTCTCCCAGACT | + |
|
Preference number: 6 (lower is better) Translates to: EASSLRLWGGSSMIL*RSPRFCRSTGFSQT Trigger: AGTCTGGGAGAAGCCAGTGGACCTACAGAACCGTGGGGACCTCAAGAGAATCATCGAGGACCCACCCCACAAACGCAAGCTGGAGGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS CCA 72 bp | TGTCTGCGGTCCCTTGTCCACTTGATGGGTGTCTTCTaGTCCAGGGCCCTCGCAGCTTTCAGTCCTGTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: CLRSLVHLMGVF*SRALAAFSPVP Trigger: AGGAACAGGACTGAAAGCTGCGAGGGCCCTGGACCAGAAGACACCCATCAAGTGGACAAGGGACCGCAGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS CAA 90 bp | TGTAGGTCCACTGGCTTCTCCCAGACTGACAGCTGCATGGTCGGGTaGAAGAAGAAAACCCGGTCATCACCCGTCCAGACCACACACCAG | + |
|
Preference number: 6 (lower is better) Translates to: CRSTGFSQTDSCMVG*KKKTRSSPVQTTHQ Trigger: CTGGTGTGTGGTCTGGACGGGTGATGACCGGGTTTTCTTCTTCAACCCGACCATGCAGCTGTCAGTCTGGGAGAAGCCAGTGGACCTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS CAA 90 bp | CTGGAACCATCACTGCTTTCAGTTGCTGAGGCCTCCAGCTTGCGTTaGTGGGGTGGGTCCTCGATGATTCTCTTGAGGTCCCCACGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LEPSLLSVAEASSLR*WGGSSMILLRSPRF Trigger: GAACCGTGGGGACCTCAAGAGAATCATCGAGGACCCACCCCACAAACGCAAGCTGGAGGCCTCAGCAACTGAAAGCAGTGATGGTTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS TCA 72 bp | CTGGCTTCTCCCAGACTGACAGCTGCATGGTCGGGTTaGAGAAGAAAACCCGGTCATCACCCGTCCAGACCA | + |
|
Preference number: 6 (lower is better) Translates to: LASPRLTAAWSG*RRKPGHHPSRP Trigger: TGGTCTGGACGGGTGATGACCGGGTTTTCTTCTTCAACCCGACCATGCAGCTGTCAGTCTGGGAGAAGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS CCA 72 bp | GCACCAACTCCACAGCAGAGGAGGGGGCTAGTCCTATaGATGGAGAATGACCACCAAACAGCCACTGTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: APTPQQRRGLVL*MENDHQTATVR Trigger: ACGGACAGTGGCTGTTTGGTGGTCATTCTCCATCCATAGGACTAGCCCCCTCCTCTGCTGTGGAGTTGGTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS CCA 72 bp | CTGCTTTCAGTTGCTGAGGCCTCCAGCTTGCGTTTGTaGGGTGGGTCCTCGATGATTCTCTTGAGGTCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LLSVAEASSLRL*GGSSMILLRSP Trigger: TGGGGACCTCAAGAGAATCATCGAGGACCCACCCCACAAACGCAAGCTGGAGGCCTCAGCAACTGAAAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS CCA 72 bp | GCTGACACCCCTCTCTCTAGCAGCATGTCTCGGAAATaGGTCACACGCTCTTCCAGGGGCAGGAGAATCTGT | + |
|
Preference number: 6 (lower is better) Translates to: ADTPLSSSMSRK*VTRSSRGRRIC Trigger: ACAGATTCTCCTGCCCCTGGAAGAGCGTGTGACCCATTTCCGAGACATGCTGCTAGAGAGAGGGGTGTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS CAA 72 bp | ACTGGCTTCTCCCAGACTGACAGCTGCATGGTCGGGTaGAAGAAGAAAACCCGGTCATCACCCGTCCAGACC | + |
|
Preference number: 6 (lower is better) Translates to: TGFSQTDSCMVG*KKKTRSSPVQT Trigger: GGTCTGGACGGGTGATGACCGGGTTTTCTTCTTCAACCCGACCATGCAGCTGTCAGTCTGGGAGAAGCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS CAA 72 bp | AGCTTGCGTTTGTGGGGTGGGTCCTCGATGATTCTCTaGAGGTCCCCACGGTTCTGTAGGTCCACTGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SLRLWGGSSMIL*RSPRFCRSTGF Trigger: GAAGCCAGTGGACCTACAGAACCGTGGGGACCTCAAGAGAATCATCGAGGACCCACCCCACAAACGCAAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS CAA 90 bp | TCTGAGCTGGAACCATCACTGCTTTCAGTTGCTGAGGCCTCCAGCTaGCGTTTGTGGGGTGGGTCCTCGATGATTCTCTTGAGGTCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SELEPSLLSVAEASS*RLWGGSSMILLRSP Trigger: TGGGGACCTCAAGAGAATCATCGAGGACCCACCCCACAAACGCAAGCTGGAGGCCTCAGCAACTGAAAGCAGTGATGGTTCCAGCTCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS GCA 72 bp | CACAGGCGTGGAGGCCACTGGTTTATTGCCTTTCGCTaGAGTTTCCTCCCCTCTTACCAATATGGGTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: HRRGGHWFIAFR*SFLPSYQYGWR Trigger: CCTCCACCCATATTGGTAAGAGGGGAGGAAACTGCAGCGAAAGGCAATAAACCAGTGGCCTCCACGCCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS CCA 72 bp | GGCAGCAGTGATGGTGATGGTGGGACCCCTGCTGATTaGCTTAAGACTGTCATGACAACCACCTGGTATGGG | + |
|
Preference number: 6 (lower is better) Translates to: GSSDGDGGTPAD*LKTVMTTTWYG Trigger: CCCATACCAGGTGGTTGTCATGACAGTCTTAAGCCAATCAGCAGGGGTCCCACCATCACCATCACTGCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
||
| CDS CAA 72 bp | TCACTGCTTTCAGTTGCTGAGGCCTCCAGCTTGCGTTaGTGGGGTGGGTCCTCGATGATTCTCTTGAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: SLLSVAEASSLR*WGGSSMILLRS Trigger: GGACCTCAAGAGAATCATCGAGGACCCACCCCACAAACGCAAGCTGGAGGCCTCAGCAACTGAAAGCAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| CDS GCA 72 bp | GGTCCTCACTGCCATCATCTGAGCTGGAACCATCACTaGTTTCAGTTGCTGAGGCCTCCAGCTTGCGTTTGT | + |
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Preference number: 6 (lower is better) Translates to: GPHCHHLSWNHH*FQLLRPPACVC Trigger: ACAAACGCAAGCTGGAGGCCTCAGCAACTGAAAGCAGTGATGGTTCCAGCTCAGATGATGGCAGTGAGGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| CDS CCA 72 bp | TGCCTTTCGCTGCAGTTTCCTCCCCTCTTACCAATATaGGTGGAGGCTCCTTATCCTCCTTGTCTCCCACCA | + |
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Preference number: 6 (lower is better) Translates to: CLSLQFPPLLPI*VEAPYPPCLPP Trigger: TGGTGGGAGACAAGGAGGATAAGGAGCCTCCACCCATATTGGTAAGAGGGGAGGAAACTGCAGCGAAAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| CDS CCA 72 bp | GTCCAGGGCCCTCGCAGCTTTCAGTCCTGTTCCTCTTaGTTTTCACACTTTGGTCCTCACTGCCATCATCTG | + |
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Preference number: 6 (lower is better) Translates to: VQGPRSFQSCSS*FSHFGPHCHHL Trigger: CAGATGATGGCAGTGAGGACCAAAGTGTGAAAACCAAGAGGAACAGGACTGAAAGCTGCGAGGGCCCTGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| CDS CAA 72 bp | GAACCATCACTGCTTTCAGTTGCTGAGGCCTCCAGCTaGCGTTTGTGGGGTGGGTCCTCGATGATTCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: EPSLLSVAEASS*RLWGGSSMILL Trigger: CAAGAGAATCATCGAGGACCCACCCCACAAACGCAAGCTGGAGGCCTCAGCAACTGAAAGCAGTGATGGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| CDS CAA 72 bp | GGTCCAGGGCCCTCGCAGCTTTCAGTCCTGTTCCTCTaGGTTTTCACACTTTGGTCCTCACTGCCATCATCT | + |
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Preference number: 6 (lower is better) Translates to: GPGPSQLSVLFL*VFTLWSSLPSS Trigger: AGATGATGGCAGTGAGGACCAAAGTGTGAAAACCAAGAGGAACAGGACTGAAAGCTGCGAGGGCCCTGGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| CDS CCA 72 bp | TTTCGCTGCAGTTTCCTCCCCTCTTACCAATATGGGTaGAGGCTCCTTATCCTCCTTGTCTCCCACCAAGCT | + |
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Preference number: 6 (lower is better) Translates to: FRCSFLPSYQYG*RLLILLVSHQA Trigger: AGCTTGGTGGGAGACAAGGAGGATAAGGAGCCTCCACCCATATTGGTAAGAGGGGAGGAAACTGCAGCGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| CDS CCA 72 bp | TTTTCACACTTTGGTCCTCACTGCCATCATCTGAGCTaGAACCATCACTGCTTTCAGTTGCTGAGGCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: FSHFGPHCHHLS*NHHCFQLLRPP Trigger: TGGAGGCCTCAGCAACTGAAAGCAGTGATGGTTCCAGCTCAGATGATGGCAGTGAGGACCAAAGTGTGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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| CDS TCA 72 bp | CATCCTCTTATCTATCCAGTTTTTCCCAACAGGAGGTaGCAGAGTAGAAGGACAGACATGTGGGAAAAGGGG | + |
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Preference number: 6 (lower is better) Translates to: HPLIYPVFPNRR*QSRRTDMWEKG Trigger: CCCCTTTTCCCACATGTCTGTCCTTCTACTCTGTCACCTCCTGTTGGGAAAAACTGGATAGATAAGAGGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160436.2 |
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