Pregenerated sensors for TCEANC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028619Ensembl transcript IDs: ENSMUST00000030362.12, ENSMUST00000057043.10, ENSMUST00000058585.14, ENSMUST00000127720.8, ENSMUST00000141165.2
Found 150 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTGCTGGAAGCTTCCCGGGCCCACTGTGGTCACTTCCCACTCAGTaGTCCCTGACAAGGTCCCCACTCCCTGCGCCCGCCCTCCCCGAC | + |
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Preference number: 1 (lower is better) Translates to: PAGSFPGPLWSLPTQ*SLTRSPLPAPALPD Trigger: GTCGGGGAGGGCGGGCGCAGGGAGTGGGGACCTTGTCAGGGACCACTGAGTGGGAAGTGACCACAGTGGGCCCGGGAAGCTTCCAGCAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
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| 3UTR CCA 90 bp | GTGGCGCGAGGCCCGGTGCTGGGCCCGTCCCCGGGTCACTTTTTGTaGGTCTGTACAAACGTGCCGACCGGCAGCGCTCCGCTCTTCACC | + |
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Preference number: 1 (lower is better) Translates to: VARGPVLGPSPGHFL*VCTNVPTGSAPLFT Trigger: GGTGAAGAGCGGAGCGCTGCCGGTCGGCACGTTTGTACAGACCCACAAAAAGTGACCCGGGGACGGGCCCAGCACCGGGCCTCGCGCCAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127720.8 |
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| 3UTR GCA 90 bp | CCACTCCCTGCGCCCGCCCTCCCCGACCCCATGTGGTTGAGCTTCTaGTCCCTGCATGAGCAACAGTGGCCCTCCCTTCTCGAGCCAGCA | + |
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Preference number: 1 (lower is better) Translates to: PLPAPALPDPMWLSF*SLHEQQWPSLLEPA Trigger: TGCTGGCTCGAGAAGGGAGGGCCACTGTTGCTCATGCAGGGAGCAGAAGCTCAACCACATGGGGTCGGGGAGGGCGGGCGCAGGGAGTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
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| 3UTR CCA 90 bp | GCGGTGGCAAGCAGGGCTGGTCGCAGGCTCCAGTGGGCTCACCCCTaGGGTAGAGCAAAGAGAGCAGACGGGAGTTCTGAGAGGCTTCGG | + |
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Preference number: 1 (lower is better) Translates to: AVASRAGRRLQWAHP*GRAKRADGSSERLR Trigger: CCGAAGCCTCTCAGAACTCCCGTCTGCTCTCTTTGCTCTACCCCAGGGGTGAGCCCACTGGAGCCTGCGACCAGCCCTGCTTGCCACCGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
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| 3UTR TCA 90 bp | TCCAGCACAGCCAACATCCGCATCACCCAAACTCAAAAGAGGCTTTaGATGGTGGCGCGAGGCCCGGTGCTGGGCCCGTCCCCGGGTCAC | + |
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Preference number: 1 (lower is better) Translates to: SSTANIRITQTQKRL*MVARGPVLGPSPGH Trigger: GTGACCCGGGGACGGGCCCAGCACCGGGCCTCGCGCCACCATTCAAAGCCTCTTTTGAGTTTGGGTGATGCGGATGTTGGCTGTGCTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127720.8 |
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| 3UTR CCA 90 bp | GCACAGCCAACATCCGCATCACCCAAACTCAAAAGAGGCTTTGAATaGTGGCGCGAGGCCCGGTGCTGGGCCCGTCCCCGGGTCACTTTT | + |
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Preference number: 1 (lower is better) Translates to: AQPTSASPKLKRGFE*WREARCWARPRVTF Trigger: AAAAGTGACCCGGGGACGGGCCCAGCACCGGGCCTCGCGCCACCATTCAAAGCCTCTTTTGAGTTTGGGTGATGCGGATGTTGGCTGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127720.8 |
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| 3UTR GCA 90 bp | TGGGTCTGTACAAACGTGCCGACCGGCAGCGCTCCGCTCTTCACCTaGTCCCGGATCTCAGCTCGGTGCTTTAATGTGAAGACCAGAGCG | + |
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Preference number: 1 (lower is better) Translates to: WVCTNVPTGSAPLFT*SRISARCFNVKTRA Trigger: CGCTCTGGTCTTCACATTAAAGCACCGAGCTGAGATCCGGGAGCAGGTGAAGAGCGGAGCGCTGCCGGTCGGCACGTTTGTACAGACCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127720.8 |
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| 3UTR CCA 90 bp | GTGAAACCTGTCACCCTTCCATTGTGCTGGGTGATGGTGACTGGATaGCACTTCCCAGTGACAGCCCCGTTCATCCCGTCAGGCAGCGCC | + |
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Preference number: 1 (lower is better) Translates to: VKPVTLPLCWVMVTG*HFPVTAPFIPSGSA Trigger: GGCGCTGCCTGACGGGATGAACGGGGCTGTCACTGGGAAGTGCCATCCAGTCACCATCACCCAGCACAATGGAAGGGTGACAGGTTTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057043.10 ENSMUST00000127720.8 |
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| 3UTR TCA 90 bp | CATGTTTTTGCACACACCTCTCCTCTGTCCCTGCACTATATCCAGTaGTCCACTGCGCAGAGCGGGGCTTCCTCACGCTGCCGAGACCCC | + |
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Preference number: 1 (lower is better) Translates to: HVFAHTSPLSLHYIQ*STAQSGASSRCRDP Trigger: GGGGTCTCGGCAGCGTGAGGAAGCCCCGCTCTGCGCAGTGGATCACTGGATATAGTGCAGGGACAGAGGAGAGGTGTGTGCAAAAACATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
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| 3UTR CCA 90 bp | CACAGTGAAACCTGTCACCCTTCCATTGTGCTGGGTGATGGTGACTaGATGGCACTTCCCAGTGACAGCCCCGTTCATCCCGTCAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: HSETCHPSIVLGDGD*MALPSDSPVHPVRQ Trigger: CTGCCTGACGGGATGAACGGGGCTGTCACTGGGAAGTGCCATCCAGTCACCATCACCCAGCACAATGGAAGGGTGACAGGTTTCACTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057043.10 ENSMUST00000127720.8 |
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| 3UTR TCA 90 bp | CCCTGCACCAGTGGCAGCTCCCCAGCCTTGTTTCCCTGCATAGGCTaGTGCTTTCTGATCGCAGTAATGAGCGGTAACAACTGGACCCTC | + |
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Preference number: 1 (lower is better) Translates to: PCTSGSSPALFPCIG*CFLIAVMSGNNWTL Trigger: GAGGGTCCAGTTGTTACCGCTCATTACTGCGATCAGAAAGCATCAGCCTATGCAGGGAAACAAGGCTGGGGAGCTGCCACTGGTGCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
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| 3UTR CCA 90 bp | ATCGCAGTAATGAGCGGTAACAACTGGACCCTCGTCCCACGTGGGTaGAAACACATTGCCTATCTCAGGGTGAAGCTCGGAGGCCTGAGG | + |
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Preference number: 1 (lower is better) Translates to: IAVMSGNNWTLVPRG*KHIAYLRVKLGGLR Trigger: CCTCAGGCCTCCGAGCTTCACCCTGAGATAGGCAATGTGTTTCCACCCACGTGGGACGAGGGTCCAGTTGTTACCGCTCATTACTGCGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
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| 3UTR CCA 90 bp | GAGAGAGAGGTGGAGGAGGGAGGGGGAGGGAGAGAGGAGACAGTCTaGGAGAGTTTTACAGAGACAGGTTGCAGAAAGAACAAGCTAGAC | + |
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Preference number: 1 (lower is better) Translates to: EREVEEGGGGREETV*ESFTETGCRKNKLD Trigger: GTCTAGCTTGTTCTTTCTGCAACCTGTCTCTGTAAAACTCTCCCAGACTGTCTCCTCTCTCCCTCCCCCTCCCTCCTCCACCTCTCTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
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| 3UTR TCA 90 bp | CTTGTCCCTCTACTTCTGCGGCTTTCCACAGTTTGCCTTCTCTGCTaGGTAAGCACCTCAACCATGCAGGTATCCCTTCCTCCAGGAAGC | + |
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Preference number: 1 (lower is better) Translates to: LVPLLLRLSTVCLLC*VSTSTMQVSLPPGS Trigger: GCTTCCTGGAGGAAGGGATACCTGCATGGTTGAGGTGCTTACTCAGCAGAGAAGGCAAACTGTGGAAAGCCGCAGAAGTAGAGGGACAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
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| 3UTR CCA 90 bp | CTATCTCCCAGGGCTCCCCACGTTCTGTCTGAAGGAATGGCACCATaGGAATATCCAGCACAGCCAACATCCGCATCACCCAAACTCAAA | + |
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Preference number: 1 (lower is better) Translates to: LSPRAPHVLSEGMAP*EYPAQPTSASPKLK Trigger: TTTGAGTTTGGGTGATGCGGATGTTGGCTGTGCTGGATATTCCCATGGTGCCATTCCTTCAGACAGAACGTGGGGAGCCCTGGGAGATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057043.10 ENSMUST00000127720.8 |
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| 3UTR CCA 90 bp | AGAACACCCAGCCTTACAGGAGCAACCCTTTCATTTCTAACCATCTaGAGCCTGCAAGTACTTCTCAGCAGGAGGGCAGGCAACCAGACC | + |
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Preference number: 1 (lower is better) Translates to: RTPSLTGATLSFLTI*SLQVLLSRRAGNQT Trigger: GGTCTGGTTGCCTGCCCTCCTGCTGAGAAGTACTTGCAGGCTCCAGATGGTTAGAAATGAAAGGGTTGCTCCTGTAAGGCTGGGTGTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
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| 3UTR CCA 90 bp | ACCTACACAGTAGAAGGAGGGAACCGACTCTTGCAAGTTGTCCTCTaGCCTCCACACGTAAACCACAGCATGCACCACCCACACTCCAAA | + |
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Preference number: 1 (lower is better) Translates to: TYTVEGGNRLLQVVL*PPHVNHSMHHPHSK Trigger: TTTGGAGTGTGGGTGGTGCATGCTGTGGTTTACGTGTGGAGGCCAGAGGACAACTTGCAAGAGTCGGTTCCCTCCTTCTACTGTGTAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
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| 3UTR TCA 90 bp | AACACTCCTGGACAGATCCAGCTAGGCAGGAGAAATGAGCAGGGGTaGAGAACTACAAGCCCCCTATCACTCATCTCAGACCAGGGAACA | + |
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Preference number: 1 (lower is better) Translates to: NTPGQIQLGRRNEQG*RTTSPLSLISDQGT Trigger: TGTTCCCTGGTCTGAGATGAGTGATAGGGGGCTTGTAGTTCTTCACCCCTGCTCATTTCTCCTGCCTAGCTGGATCTGTCCAGGAGTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
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| 3UTR GCA 90 bp | GAGGGCCAATTGGCTAACGCATTCAGGACTCCTGAGACATGTTTTTaGACACACCTCTCCTCTGTCCCTGCACTATATCCAGTGATCCAC | + |
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Preference number: 1 (lower is better) Translates to: EGQLANAFRTPETCF*THLSSVPALYPVIH Trigger: GTGGATCACTGGATATAGTGCAGGGACAGAGGAGAGGTGTGTGCAAAAACATGTCTCAGGAGTCCTGAATGCGTTAGCCAATTGGCCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
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| 3UTR TCA 90 bp | CAAGAGAAATTTCATTATGCATCTTCAACAGAGGCTGTATTCAAATaGACCCCGAGGTGCAGGGAGGCTTCAGGCCAGCTCCTCATTAGA | + |
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Preference number: 1 (lower is better) Translates to: QEKFHYASSTEAVFK*TPRCREASGQLLIR Trigger: TCTAATGAGGAGCTGGCCTGAAGCCTCCCTGCACCTCGGGGTTCATTTGAATACAGCCTCTGTTGAAGATGCATAATGAAATTTCTCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
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| 3UTR CCA 90 bp | ATCGCCAAGACATCTTACCCTCCAGCTGACACCGATGACATCTTTTaGGTAGCAAGCAATTTGTTCTTAACTCACTCTGGACCCCTAAGT | + |
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Preference number: 1 (lower is better) Translates to: IAKTSYPPADTDDIF*VASNLFLTHSGPLS Trigger: ACTTAGGGGTCCAGAGTGAGTTAAGAACAAATTGCTTGCTACCCAAAAGATGTCATCGGTGTCAGCTGGAGGGTAAGATGTCTTGGCGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
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| 3UTR CCA 90 bp | ATTTGTAAGGAAGAGAAACTGTACTTATGGTTATCTGCGGGGCAATaGACCGACCGTGCCAGGAAATTTGATAAGGTTGTGTGGATTCGG | + |
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Preference number: 1 (lower is better) Translates to: ICKEEKLYLWLSAGQ*TDRARKFDKVVWIR Trigger: CCGAATCCACACAACCTTATCAAATTTCCTGGCACGGTCGGTCCATTGCCCCGCAGATAACCATAAGTACAGTTTCTCTTCCTTACAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
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| 3UTR TCA 90 bp | TGTGATGTGGCTCAGCCCTTAGCACACACCATTAATCCCAAACAATaGAGGCTGGAGTTAGTTTGTAGAAGGAAGCATGTATGTTTGAAA | + |
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Preference number: 1 (lower is better) Translates to: CDVAQPLAHTINPKQ*RLELVCRRKHVCLK Trigger: TTTCAAACATACATGCTTCCTTCTACAAACTAACTCCAGCCTTCATTGTTTGGGATTAATGGTGTGTGCTAAGGGCTGAGCCACATCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
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| 3UTR CCA 90 bp | GTTAAAGTGCTACAGAATATTTGTAAGGAAGAGAAACTGTACTTATaGTTATCTGCGGGGCAATGGACCGACCGTGCCAGGAAATTTGAT | + |
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Preference number: 1 (lower is better) Translates to: VKVLQNICKEEKLYL*LSAGQWTDRARKFD Trigger: ATCAAATTTCCTGGCACGGTCGGTCCATTGCCCCGCAGATAACCATAAGTACAGTTTCTCTTCCTTACAAATATTCTGTAGCACTTTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
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| 3UTR GCA 90 bp | GAAAATCTTCACGTATGCATTTTTCTTCTTACAGCAGTAAGTCACTaGAAGAGAAATTTCATTATGCATCTTCAACAGAGGCTGTATTCA | + |
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Preference number: 1 (lower is better) Translates to: ENLHVCIFLLTAVSH*KRNFIMHLQQRLYS Trigger: TGAATACAGCCTCTGTTGAAGATGCATAATGAAATTTCTCTTGCAGTGACTTACTGCTGTAAGAAGAAAAATGCATACGTGAAGATTTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
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| 3UTR CAA 90 bp | ATGGTGGCGCGAGGCCCGGTGCTGGGCCCGTCCCCGGGTCACTTTTaGTGGGTCTGTACAAACGTGCCGACCGGCAGCGCTCCGCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: MVARGPVLGPSPGHF*WVCTNVPTGSAPLF Trigger: GAAGAGCGGAGCGCTGCCGGTCGGCACGTTTGTACAGACCCACAAAAAGTGACCCGGGGACGGGCCCAGCACCGGGCCTCGCGCCACCAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127720.8 |
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| 3UTR-3UTR TCA 90 bp | GTCAGGCAGCGCCAGCGCAAGGCAGCTAATGAAGCCGCCCCCACAGGCCTATCTGGGGCTGGAACCGCGTaGGGAGCAGCGGTAATTGAG | + |
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Preference number: 2 (lower is better) Translates to: VRQRQRKAANEAAPTGLSGAGTA*GAAVIE Trigger: CTCAATTACCGCTGCTCCTCACGCGGTTCCAGCCCC...AGATAGGCCTGTGGGGGCGGCTTCATTAGCTGCCTTGCGCTGGCGCTGCCTGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
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| 3UTR CAA 90 bp | ATCCAGCACAGCCAACATCCGCATCACCCAAACTCAAAAGAGGCTTaGAATGGTGGCGCGAGGCCCGGTGCTGGGCCCGTCCCCGGGTCA | + |
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Preference number: 2 (lower is better) Translates to: IQHSQHPHHPNSKEA*NGGARPGAGPVPGS Trigger: TGACCCGGGGACGGGCCCAGCACCGGGCCTCGCGCCACCATTCAAAGCCTCTTTTGAGTTTGGGTGATGCGGATGTTGGCTGTGCTGGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127720.8 |
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| 3UTR-3UTR TCA 90 bp | TTTTTGTGGGTCTGTACAAACGTGCCGACCGGCAGCGCTCCGCTCTTCACCTGCAGCCGGGAGCAGAGATaGAACGTTTCCCGCTCAATA | + |
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Preference number: 2 (lower is better) Translates to: FLWVCTNVPTGSAPLFTCSREQR*NVSRSI Trigger: TATTGAGCGGGAAACGTTTCATCTCTGCTCCCGGCT...GCAGGTGAAGAGCGGAGCGCTGCCGGTCGGCACGTTTGTACAGACCCACAAAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127720.8 |
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| 3UTR-3UTR GCA 90 bp | TTTTTGTGGGTCTGTACAAACGTGCCGACCGGCAGCGCTCCGCTCTTCACCTGCGTCACCCTTCCATTGTaGTGGGTGATGGTGACTGGA | + |
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Preference number: 2 (lower is better) Translates to: FLWVCTNVPTGSAPLFTCVTLPL*WVMVTG Trigger: TCCAGTCACCATCACCCAGCACAATGGAAGGGTGAC...GCAGGTGAAGAGCGGAGCGCTGCCGGTCGGCACGTTTGTACAGACCCACAAAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127720.8 |
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| 3UTR-3UTR CCA 90 bp | GCCTATCTCCCAGGGCTCCCCACGTTCTGTCTGAAGGAATGGCACCATGGGAATGTGATGGTGACTGGATaGCACTTCCCAGTGACAGCC | + |
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Preference number: 2 (lower is better) Translates to: AYLPGLPTFCLKEWHHGNVMVTG*HFPVTA Trigger: GGCTGTCACTGGGAAGTGCCATCCAGTCACCATCAC...ATTCCCATGGTGCCATTCCTTCAGACAGAACGTGGGGAGCCCTGGGAGATAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057043.10 ENSMUST00000127720.8 |
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| 3UTR-3UTR CCA 90 bp | CGACTCTTGCAAGTTGTCCTCTGGCCTCCACACGTAAACCACAGCATGCACCACGTGATGGTGACTGGATaGCACTTCCCAGTGACAGCC | + |
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Preference number: 2 (lower is better) Translates to: RLLQVVLWPPHVNHSMHHVMVTG*HFPVTA Trigger: GGCTGTCACTGGGAAGTGCCATCCAGTCACCATCAC...GTGGTGCATGCTGTGGTTTACGTGTGGAGGCCAGAGGACAACTTGCAAGAGTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
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| 3UTR-3UTR CCA 90 bp | CCGACTCTTGCAAGTTGTCCTCTGGCCTCCACACGTAAACCACAGCATGCACCATGTGTGCCACCAACCTaGCCTCCCTCCAGTTCTCAT | + |
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Preference number: 2 (lower is better) Translates to: PTLASCPLASTRKPQHAPCVPPT*PPSSSH Trigger: ATGAGAACTGGAGGGAGGCCAGGTTGGTGGCACACA...TGGTGCATGCTGTGGTTTACGTGTGGAGGCCAGAGGACAACTTGCAAGAGTCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
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| 3UTR-3UTR CCA 90 bp | CCGACTCTTGCAAGTTGTCCTCTGGCCTCCACACGTAAACCACAGCATGCACCACTTACCGGTCCTCCCTaGACTAAGAGCCCCTCAAGT | + |
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Preference number: 2 (lower is better) Translates to: PTLASCPLASTRKPQHAPLTGPP*TKSPSS Trigger: ACTTGAGGGGCTCTTAGTCCAGGGAGGACCGGTAAG...TGGTGCATGCTGTGGTTTACGTGTGGAGGCCAGAGGACAACTTGCAAGAGTCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
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| 3UTR-3UTR CCA 90 bp | GGCCTATCTCCCAGGGCTCCCCACGTTCTGTCTGAAGGAATGGCACCATGGGAATTCTGTCTGAAGGAATaGCACCATGGGAATATCCAG | + |
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Preference number: 2 (lower is better) Translates to: GLSPRAPHVLSEGMAPWEFCLKE*HHGNIQ Trigger: CTGGATATTCCCATGGTGCCATTCCTTCAGACAGAA...TTCCCATGGTGCCATTCCTTCAGACAGAACGTGGGGAGCCCTGGGAGATAGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057043.10 ENSMUST00000127720.8 |
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| 3UTR-3UTR CCA 90 bp | TGTAAGAATTACTCCAAGGGTCTTCTGAGAGCTGCTGTCATACAAGAGCTGCTGTTAGAGGCCTCAGCATaGGGGCTCAGGAGCCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: CKNYSKGLLRAAVIQELLLEASA*GLRSPS Trigger: GGAGGGGCTCCTGAGCCCCCATGCTGAGGCCTCTAA...CAGCAGCTCTTGTATGACAGCAGCTCTCAGAAGACCCTTGGAGTAATTCTTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
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| 3UTR-3UTR CCA 90 bp | AGCTCAACGGCCTGTTTAATCACTGGTACCTACACAGTAGAAGGAGGGAACCGACAGACCCCTGAGTGCTaGGATTACAGGCAGGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: SSTACLITGTYTVEGGNRQTPEC*DYRQEP Trigger: TGGCTCCTGCCTGTAATCCCAGCACTCAGGGGTCTG...TCGGTTCCCTCCTTCTACTGTGTAGGTACCAGTGATTAAACAGGCCGTTGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
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| 3UTR-3UTR GCA 90 bp | AGCTCAACGGCCTGTTTAATCACTGGTACCTACACAGTAGAAGGAGGGAACCGATCTCAGACCCCTGAGTaGTGGGATTACAGGCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: SSTACLITGTYTVEGGNRSQTPE*WDYRQE Trigger: CTCCTGCCTGTAATCCCAGCACTCAGGGGTCTGAGA...TCGGTTCCCTCCTTCTACTGTGTAGGTACCAGTGATTAAACAGGCCGTTGAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
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| 3UTR-3UTR CCA 90 bp | AGGAAAACTCAAACACTACTTCCAGGAACTGGAAGCTCTCCAAGTGGGGAGAAACTCCCCGACCCCATGTaGTTGAGCTTCTGCTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: RKTQTLLPGTGSSPSGEKLPDPM*LSFCSL Trigger: CAGGGAGCAGAAGCTCAACCACATGGGGTCGGGGAG...TTTCTCCCCACTTGGAGAGCTTCCAGTTCCTGGAAGTAGTGTTTGAGTTTTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
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| 3UTR-3UTR CCA 90 bp | AGGAAAACTCAAACACTACTTCCAGGAACTGGAAGCTCTCCAAGTGGGGAGAAATTCCCGGGCCCACTGTaGTCACTTCCCACTCAGTGG | + |
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Preference number: 2 (lower is better) Translates to: RKTQTLLPGTGSSPSGEKFPGPL*SLPTQW Trigger: CCACTGAGTGGGAAGTGACCACAGTGGGCCCGGGAA...TTTCTCCCCACTTGGAGAGCTTCCAGTTCCTGGAAGTAGTGTTTGAGTTTTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
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| 3UTR CAA 90 bp | GGAACACTTGCAATGCAGACAGCATCCTCCCTGACCCTTCCATCCTaGCTTTGCAAACAATCCCTTTCCCTTTCCTTCCCACATTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: GTLAMQTASSLTLPS*LCKQSLSLSFPHSL Trigger: GAGAGAATGTGGGAAGGAAAGGGAAAGGGATTGTTTGCAAAGCAAGGATGGAAGGGTCAGGGAGGATGCTGTCTGCATTGCAAGTGTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
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| 3UTR-3UTR TCA 90 bp | AGGAAAACTCAAACACTACTTCCAGGAACTGGAAGCTCTCCAAGTGGGGAGAAATCTGTCTCAGACCCCTaGGTGCTGGGATTACAGGCA | + |
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Preference number: 2 (lower is better) Translates to: RKTQTLLPGTGSSPSGEKSVSDP*VLGLQA Trigger: TGCCTGTAATCCCAGCACTCAGGGGTCTGAGACAGA...TTTCTCCCCACTTGGAGAGCTTCCAGTTCCTGGAAGTAGTGTTTGAGTTTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
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| 3UTR-3UTR GCA 90 bp | CGACTCTTGCAAGTTGTCCTCTGGCCTCCACACGTAAACCACAGCATGCACCACCTCAGTTCTGTAGTATaGTTCATGGGGGAAACTATG | + |
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Preference number: 2 (lower is better) Translates to: RLLQVVLWPPHVNHSMHHLSSVV*FMGETM Trigger: CATAGTTTCCCCCATGAAGCATACTACAGAACTGAG...GTGGTGCATGCTGTGGTTTACGTGTGGAGGCCAGAGGACAACTTGCAAGAGTCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
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| 3UTR-3UTR GCA 90 bp | GCGGCTTTCCACAGTTTGCCTTCTCTGCTGAGTAAGCACCTCAACCATGCAGGTGTCTTCCTCCAGCCTTaGTATCTTTTTCAGGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: AAFHSLPSLLSKHLNHAGVFLQP*YLFQVL Trigger: CAGAACCTGAAAAAGATAGCAAGGCTGGAGGAAGAC...ACCTGCATGGTTGAGGTGCTTACTCAGCAGAGAAGGCAAACTGTGGAAAGCCGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
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| 3UTR-3UTR CCA 90 bp | AGGAAAACTCAAACACTACTTCCAGGAACTGGAAGCTCTCCAAGTGGGGAGAAACTGGGTGATGGTGACTaGATGGCACTTCCCAGTGAC | + |
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Preference number: 2 (lower is better) Translates to: RKTQTLLPGTGSSPSGEKLGDGD*MALPSD Trigger: GTCACTGGGAAGTGCCATCCAGTCACCATCACCCAG...TTTCTCCCCACTTGGAGAGCTTCCAGTTCCTGGAAGTAGTGTTTGAGTTTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
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| 3UTR-3UTR CCA 90 bp | CCTATCACTCATCTCAGACCAGGGAACACTTGCAATGCAGACAGCATCCTCCCTCTATGTAGAACAGGCTaGTCTGCCTCTGCTTCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: PITHLRPGNTCNADSILPLCRTG*SASASK Trigger: TTTGGAAGCAGAGGCAGACCAGCCTGTTCTACATAG...AGGGAGGATGCTGTCTGCATTGCAAGTGTTCCCTGGTCTGAGATGAGTGATAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR-3UTR TCA 90 bp | TGTTCCTGGTACTGGAGACTCAGAAGGGAGGAAAACTCAAACACTACTTCCAGGTCTTCCAGGGAGAGCTaGAAGGCTCAGATAAGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: CSWYWRLRREENSNTTSRSSRES*KAQISE Trigger: CTCACTTATCTGAGCCTTTCAGCTCTCCCTGGAAGA...CCTGGAAGTAGTGTTTGAGTTTTCCTCCCTTCTGAGTCTCCAGTACCAGGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR-3UTR TCA 90 bp | TGTAAGAATTACTCCAAGGGTCTTCTGAGAGCTGCTGTCATACAAGAGCTGCTGAGACAGCATCCTCCCTaGCCCTTCCATCCTTGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: CKNYSKGLLRAAVIQELLRQHPP*PFHPCF Trigger: AAAGCAAGGATGGAAGGGTCAGGGAGGATGCTGTCT...CAGCAGCTCTTGTATGACAGCAGCTCTCAGAAGACCCTTGGAGTAATTCTTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR CAA 90 bp | TCTCTCCTTCCCCTCGTCTCCTCCCTAGAGCCAGGTATCACCAACTaGACCAATCCAAATGCTTTAGAAACTGCCTGTTGCAGGATATTT | + |
|
Preference number: 2 (lower is better) Translates to: SLLPLVSSLEPGITN*TNPNALETACCRIF Trigger: AAATATCCTGCAACAGGCAGTTTCTAAAGCATTTGGATTGGTCAAGTTGGTGATACCTGGCTCTAGGGAGGAGACGAGGGGAAGGAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR-3UTR GCA 90 bp | CCTATCACTCATCTCAGACCAGGGAACACTTGCAATGCAGACAGCATCCTCCCTCTTCCATCCTTGCTTTaGAAACAATCCCTTTCCCTT | + |
|
Preference number: 2 (lower is better) Translates to: PITHLRPGNTCNADSILPLPSLL*KQSLSL Trigger: AAGGGAAAGGGATTGTTTGCAAAGCAAGGATGGAAG...AGGGAGGATGCTGTCTGCATTGCAAGTGTTCCCTGGTCTGAGATGAGTGATAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR-3UTR GCA 90 bp | CCGACTCTTGCAAGTTGTCCTCTGGCCTCCACACGTAAACCACAGCATGCACCATTAGAAACTGCCTGTTaGAGGATATTTGATCACACT | + |
|
Preference number: 2 (lower is better) Translates to: PTLASCPLASTRKPQHAPLETAC*RIFDHT Trigger: AGTGTGATCAAATATCCTGCAACAGGCAGTTTCTAA...TGGTGCATGCTGTGGTTTACGTGTGGAGGCCAGAGGACAACTTGCAAGAGTCGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR-3UTR CCA 90 bp | AATCTTCACGTATGCATTTTTCTTCTTACAGCAGTAAGTCACTGCAAGAGAAATCTTCATCTGCTGACATaGGGGAGTTTAGAGGTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: NLHVCIFLLTAVSHCKRNLHLLT*GSLEVS Trigger: GGACACCTCTAAACTCCCCCATGTCAGCAGATGAAG...ATTTCTCTTGCAGTGACTTACTGCTGTAAGAAGAAAAATGCATACGTGAAGATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR CCA 72 bp | GGCCCGGTGCTGGGCCCGTCCCCGGGTCACTTTTTGTaGGTCTGTACAAACGTGCCGACCGGCAGCGCTCCG | + |
|
Preference number: 3 (lower is better) Translates to: GPVLGPSPGHFL*VCTNVPTGSAP Trigger: CGGAGCGCTGCCGGTCGGCACGTTTGTACAGACCCACAAAAAGTGACCCGGGGACGGGCCCAGCACCGGGCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127720.8 |
||
| 3UTR TCA 72 bp | CACTCCCTGCGCCCGCCCTCCCCGACCCCATGTGGTTaGGCTTCTGCTCCCTGCATGAGCAACAGTGGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: HSLRPPSPTPCG*ASAPCMSNSGP Trigger: AGGGCCACTGTTGCTCATGCAGGGAGCAGAAGCTCAACCACATGGGGTCGGGGAGGGCGGGCGCAGGGAGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR GCA 72 bp | GCGCCCGCCCTCCCCGACCCCATGTGGTTGAGCTTCTaGTCCCTGCATGAGCAACAGTGGCCCTCCCTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: APALPDPMWLSF*SLHEQQWPSLL Trigger: GAGAAGGGAGGGCCACTGTTGCTCATGCAGGGAGCAGAAGCTCAACCACATGGGGTCGGGGAGGGCGGGCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR CCA 72 bp | TCCGCATCACCCAAACTCAAAAGAGGCTTTGAATGGTaGCGCGAGGCCCGGTGCTGGGCCCGTCCCCGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: SASPKLKRGFEW*REARCWARPRV Trigger: GACCCGGGGACGGGCCCAGCACCGGGCCTCGCGCCACCATTCAAAGCCTCTTTTGAGTTTGGGTGATGCGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127720.8 |
||
| 3UTR GCA 72 bp | AGCGGGGCTTCCTCACGCTGCCGAGACCCCTGGCCATaGTTCCAGCCTTGCTGTGGAGATGAACCTTCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: SGASSRCRDPWP*FQPCCGDEPSG Trigger: CCCAGAAGGTTCATCTCCACAGCAAGGCTGGAAGCATGGCCAGGGGTCTCGGCAGCGTGAGGAAGCCCCGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR CCA 72 bp | ACATCCGCATCACCCAAACTCAAAAGAGGCTTTGAATaGTGGCGCGAGGCCCGGTGCTGGGCCCGTCCCCGG | + |
|
Preference number: 3 (lower is better) Translates to: TSASPKLKRGFE*WREARCWARPR Trigger: CCGGGGACGGGCCCAGCACCGGGCCTCGCGCCACCATTCAAAGCCTCTTTTGAGTTTGGGTGATGCGGATGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030362.12 ENSMUST00000057043.10 ENSMUST00000127720.8 |
||
| 3UTR CCA 72 bp | AGCAGGGCTGGTCGCAGGCTCCAGTGGGCTCACCCCTaGGGTAGAGCAAAGAGAGCAGACGGGAGTTCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SRAGRRLQWAHP*GRAKRADGSSE Trigger: CTCAGAACTCCCGTCTGCTCTCTTTGCTCTACCCCAGGGGTGAGCCCACTGGAGCCTGCGACCAGCCCTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR TCA 72 bp | GCCAACATCCGCATCACCCAAACTCAAAAGAGGCTTTaGATGGTGGCGCGAGGCCCGGTGCTGGGCCCGTCC | + |
|
Preference number: 3 (lower is better) Translates to: ANIRITQTQKRL*MVARGPVLGPS Trigger: GGACGGGCCCAGCACCGGGCCTCGCGCCACCATTCAAAGCCTCTTTTGAGTTTGGGTGATGCGGATGTTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030362.12 ENSMUST00000057043.10 ENSMUST00000127720.8 |
||
| 3UTR TCA 72 bp | CCCCGACCCCATGTGGTTGAGCTTCTGCTCCCTGCATaGGCAACAGTGGCCCTCCCTTCTCGAGCCAGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: PRPHVVELLLPA*ATVALPSRASN Trigger: GTTGCTGGCTCGAGAAGGGAGGGCCACTGTTGCTCATGCAGGGAGCAGAAGCTCAACCACATGGGGTCGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR GCA 72 bp | CTCTCCTCTGTCCCTGCACTATATCCAGTGATCCACTaGGCAGAGCGGGGCTTCCTCACGCTGCCGAGACCC | + |
|
Preference number: 3 (lower is better) Translates to: LSSVPALYPVIH*AERGFLTLPRP Trigger: GGGTCTCGGCAGCGTGAGGAAGCCCCGCTCTGCGCAGTGGATCACTGGATATAGTGCAGGGACAGAGGAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR TCA 72 bp | TCAGGAGCCCCTCCCCGAAGGTCTTCCAGGGAGAGCTaGAAGGCTCAGATAAGTGAGCGGTGGCAAGCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: SGAPPRRSSRES*KAQISERWQAG Trigger: CCCTGCTTGCCACCGCTCACTTATCTGAGCCTTTCAGCTCTCCCTGGAAGACCTTCGGGGAGGGGCTCCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR TCA 72 bp | GCACACACCTCTCCTCTGTCCCTGCACTATATCCAGTaGTCCACTGCGCAGAGCGGGGCTTCCTCACGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: AHTSPLSLHYIQ*STAQSGASSRC Trigger: GCAGCGTGAGGAAGCCCCGCTCTGCGCAGTGGATCACTGGATATAGTGCAGGGACAGAGGAGAGGTGTGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR TCA 72 bp | TCACCTGCTCCCGGATCTCAGCTCGGTGCTTTAATGTaGAGACCAGAGCGCGTACCGTCCTCCGGTAGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: SPAPGSQLGALM*RPERVPSSGRA Trigger: GGCCCTACCGGAGGACGGTACGCGCTCTGGTCTTCACATTAAAGCACCGAGCTGAGATCCGGGAGCAGGTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127720.8 |
||
| 3UTR TCA 72 bp | AAGGTCTTCCAGGGAGAGCTGAAAGGCTCAGATAAGTaGGCGGTGGCAAGCAGGGCTGGTCGCAGGCTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: KVFQGELKGSDK*AVASRAGRRLQ Trigger: CTGGAGCCTGCGACCAGCCCTGCTTGCCACCGCTCACTTATCTGAGCCTTTCAGCTCTCCCTGGAAGACCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR GCA 72 bp | GCTCCGCTCTTCACCTGCTCCCGGATCTCAGCTCGGTaGTTTAATGTGAAGACCAGAGCGCGTACCGTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: APLFTCSRISAR*FNVKTRARTVL Trigger: GAGGACGGTACGCGCTCTGGTCTTCACATTAAAGCACCGAGCTGAGATCCGGGAGCAGGTGAAGAGCGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127720.8 |
||
| 3UTR GCA 72 bp | ACAAACGTGCCGACCGGCAGCGCTCCGCTCTTCACCTaGTCCCGGATCTCAGCTCGGTGCTTTAATGTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: TNVPTGSAPLFT*SRISARCFNVK Trigger: CTTCACATTAAAGCACCGAGCTGAGATCCGGGAGCAGGTGAAGAGCGGAGCGCTGCCGGTCGGCACGTTTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127720.8 |
||
| 3UTR CCA 72 bp | GTAACACTTCCTGCTGGAAGCTTCCCGGGCCCACTGTaGTCACTTCCCACTCAGTGGTCCCTGACAAGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: VTLPAGSFPGPL*SLPTQWSLTRS Trigger: GGACCTTGTCAGGGACCACTGAGTGGGAAGTGACCACAGTGGGCCCGGGAAGCTTCCAGCAGGAAGTGTTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR-3UTR CAA 90 bp | CAACAGTGGCCCTCCCTTCTCGAGCCAGCAACCTGCCCCCTCTCCCCCTCCCCCTTTGGAGACAGAGTCTaGTTATATAGCTCCAACTGG | + |
|
Preference number: 3 (lower is better) Translates to: QQWPSLLEPATCPLSPSPFGDRV*LYSSNW Trigger: CCAGTTGGAGCTATATAACAAGACTCTGTCTCCAAA...GGGGGAGGGGGAGAGGGGGCAGGTTGCTGGCTCGAGAAGGGAGGGCCACTGTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR GCA 72 bp | AGGCAGGGGCAGCTCAAGTTTCAGGCCTGTGTGGGCTaGGTGGCAAGACCACCTCACAACAGTCATGCGAAA | + |
|
Preference number: 3 (lower is better) Translates to: RQGQLKFQACVG*VARPPHNSHAK Trigger: TTTCGCATGACTGTTGTGAGGTGGTCTTGCCACGCAGCCCACACAGGCCTGAAACTTGAGCTGCCCCTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
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| 3UTR CCA 72 bp | GTCACCCTTCCATTGTGCTGGGTGATGGTGACTGGATaGCACTTCCCAGTGACAGCCCCGTTCATCCCGTCA | + |
|
Preference number: 3 (lower is better) Translates to: VTLPLCWVMVTG*HFPVTAPFIPS Trigger: TGACGGGATGAACGGGGCTGTCACTGGGAAGTGCCATCCAGTCACCATCACCCAGCACAATGGAAGGGTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057043.10 ENSMUST00000127720.8 |
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| 3UTR CCA 72 bp | ACCTGTCACCCTTCCATTGTGCTGGGTGATGGTGACTaGATGGCACTTCCCAGTGACAGCCCCGTTCATCCC | + |
|
Preference number: 3 (lower is better) Translates to: TCHPSIVLGDGD*MALPSDSPVHP Trigger: GGGATGAACGGGGCTGTCACTGGGAAGTGCCATCCAGTCACCATCACCCAGCACAATGGAAGGGTGACAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057043.10 ENSMUST00000127720.8 |
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| 3UTR CCA 72 bp | CTGCTGTCATACAAGAGCTGCTGTAACACTTCCTGCTaGAAGCTTCCCGGGCCCACTGTGGTCACTTCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: LLSYKSCCNTSC*KLPGPTVVTSH Trigger: GTGGGAAGTGACCACAGTGGGCCCGGGAAGCTTCCAGCAGGAAGTGTTACAGCAGCTCTTGTATGACAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
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| 3UTR CCA 72 bp | CCCTGTCATGTGACCACGACACCCCATGGAGAGGATTaGTCATGTAGGTGCAGCATCCCAAGTCCTTCCACG | + |
|
Preference number: 3 (lower is better) Translates to: PCHVTTTPHGED*SCRCSIPSPST Trigger: CGTGGAAGGACTTGGGATGCTGCACCTACATGACCAATCCTCTCCATGGGGTGTCGTGGTCACATGACAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
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| 3UTR GCA 72 bp | GGCAAGCTCACAGTGAAACCTGTCACCCTTCCATTGTaGTGGGTGATGGTGACTGGATGGCACTTCCCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: GKLTVKPVTLPL*WVMVTGWHFPV Trigger: CACTGGGAAGTGCCATCCAGTCACCATCACCCAGCACAATGGAAGGGTGACAGGTTTCACTGTGAGCTTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057043.10 ENSMUST00000127720.8 |
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| 3UTR CCA 72 bp | TATCTCCCAGGGCTCCCCACGTTCTGTCTGAAGGAATaGCACCATGGGAATATCCAGCACAGCCAACATCCG | + |
|
Preference number: 3 (lower is better) Translates to: YLPGLPTFCLKE*HHGNIQHSQHP Trigger: CGGATGTTGGCTGTGCTGGATATTCCCATGGTGCCATTCCTTCAGACAGAACGTGGGGAGCCCTGGGAGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057043.10 ENSMUST00000127720.8 |
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| 3UTR CCA 72 bp | GTAGAAGGAGGGAACCGACTCTTGCAAGTTGTCCTCTaGCCTCCACACGTAAACCACAGCATGCACCACCCA | + |
|
Preference number: 3 (lower is better) Translates to: VEGGNRLLQVVL*PPHVNHSMHHP Trigger: TGGGTGGTGCATGCTGTGGTTTACGTGTGGAGGCCAGAGGACAACTTGCAAGAGTCGGTTCCCTCCTTCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR GCA 72 bp | TGCCTCTGCTTCCAAAGTGCTAGGATAAAAGGTGTGTaGCACCAACCTGGCCTCCCTCCAGTTCTCATCCCA | + |
|
Preference number: 3 (lower is better) Translates to: CLCFQSARIKGV*HQPGLPPVLIP Trigger: TGGGATGAGAACTGGAGGGAGGCCAGGTTGGTGGCACACACCTTTTATCCTAGCACTTTGGAAGCAGAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR GCA 72 bp | AAGCCCCCTATCACTCATCTCAGACCAGGGAACACTTaGAATGCAGACAGCATCCTCCCTGACCCTTCCATC | + |
|
Preference number: 3 (lower is better) Translates to: KPPITHLRPGNT*NADSILPDPSI Trigger: GATGGAAGGGTCAGGGAGGATGCTGTCTGCATTGCAAGTGTTCCCTGGTCTGAGATGAGTGATAGGGGGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR TCA 72 bp | CACCAACCTGGCCTCCCTCCAGTTCTCATCCCACCATaGACTTTACCAGCTGCCTCCTTTCTACCCCATTTA | + |
|
Preference number: 3 (lower is better) Translates to: HQPGLPPVLIPP*TLPAASFLPHL Trigger: TAAATGGGGTAGAAAGGAGGCAGCTGGTAAAGTTCATGGTGGGATGAGAACTGGAGGGAGGCCAGGTTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR TCA 72 bp | GGACAGATCCAGCTAGGCAGGAGAAATGAGCAGGGGTaGAGAACTACAAGCCCCCTATCACTCATCTCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: GQIQLGRRNEQG*RTTSPLSLISD Trigger: GTCTGAGATGAGTGATAGGGGGCTTGTAGTTCTTCACCCCTGCTCATTTCTCCTGCCTAGCTGGATCTGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR TCA 72 bp | GAGGACAGTAAGTGCTTCACCTGTTCCCCTGTCATGTaGCCACGACACCCCATGGAGAGGATTGGTCATGTA | + |
|
Preference number: 3 (lower is better) Translates to: EDSKCFTCSPVM*PRHPMERIGHV Trigger: TACATGACCAATCCTCTCCATGGGGTGTCGTGGTCACATGACAGGGGAACAGGTGAAGCACTTACTGTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR TCA 72 bp | AGTGGCAGCTCCCCAGCCTTGTTTCCCTGCATAGGCTaGTGCTTTCTGATCGCAGTAATGAGCGGTAACAAC | + |
|
Preference number: 3 (lower is better) Translates to: SGSSPALFPCIG*CFLIAVMSGNN Trigger: GTTGTTACCGCTCATTACTGCGATCAGAAAGCATCAGCCTATGCAGGGAAACAAGGCTGGGGAGCTGCCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR CCA 72 bp | GGACACCTAACTGGCACCGGGCTCTGTTCCTGGTACTaGAGACTCAGAAGGGAGGAAAACTCAAACACTACT | + |
|
Preference number: 3 (lower is better) Translates to: GHLTGTGLCSWY*RLRREENSNTT Trigger: AGTAGTGTTTGAGTTTTCCTCCCTTCTGAGTCTCCAGTACCAGGAACAGAGCCCGGTGCCAGTTAGGTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR CCA 72 bp | AGCTATGGACACCTAACTGGCACCGGGCTCTGTTCCTaGTACTGGAGACTCAGAAGGGAGGAAAACTCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: SYGHLTGTGLCS*YWRLRREENSN Trigger: GTTTGAGTTTTCCTCCCTTCTGAGTCTCCAGTACCAGGAACAGAGCCCGGTGCCAGTTAGGTGTCCATAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR CCA 72 bp | AGCCTTACAGGAGCAACCCTTTCATTTCTAACCATCTaGAGCCTGCAAGTACTTCTCAGCAGGAGGGCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: SLTGATLSFLTI*SLQVLLSRRAG Trigger: GCCTGCCCTCCTGCTGAGAAGTACTTGCAGGCTCCAGATGGTTAGAAATGAAAGGGTTGCTCCTGTAAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR CCA 72 bp | AGGGAAATAAGGCAAAGGCTCTTTGTTCTGCGGCACTaGGGATCTAACAAACTCAGGGCCTCGTGTAAGCGA | + |
|
Preference number: 3 (lower is better) Translates to: REIRQRLFVLRH*GSNKLRASCKR Trigger: TCGCTTACACGAGGCCCTGAGTTTGTTAGATCCCCAGTGCCGCAGAACAAAGAGCCTTTGCCTTATTTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR CCA 72 bp | GCTCAATTATACAGTCAACAGCTATGGACACCTAACTaGCACCGGGCTCTGTTCCTGGTACTGGAGACTCAG | + |
|
Preference number: 3 (lower is better) Translates to: AQLYSQQLWTPN*HRALFLVLETQ Trigger: CTGAGTCTCCAGTACCAGGAACAGAGCCCGGTGCCAGTTAGGTGTCCATAGCTGTTGACTGTATAATTGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR TCA 72 bp | TTTCATTATGCATCTTCAACAGAGGCTGTATTCAAATaGACCCCGAGGTGCAGGGAGGCTTCAGGCCAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: FHYASSTEAVFK*TPRCREASGQL Trigger: GAGCTGGCCTGAAGCCTCCCTGCACCTCGGGGTTCATTTGAATACAGCCTCTGTTGAAGATGCATAATGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR TCA 72 bp | ACCAGGGAACACTTGCAATGCAGACAGCATCCTCCCTaGCCCTTCCATCCTTGCTTTGCAAACAATCCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: TREHLQCRQHPP*PFHPCFANNPF Trigger: AAAGGGATTGTTTGCAAAGCAAGGATGGAAGGGTCAGGGAGGATGCTGTCTGCATTGCAAGTGTTCCCTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR TCA 72 bp | GGAGCCAGAAGATTAGAACAGATGCTAAAGTTAGTATaGGGCCAAGCAGAGCAATTCAGGAGAGGCCGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: GARRLEQMLKLV*GQAEQFRRGRE Trigger: CTCACGGCCTCTCCTGAATTGCTCTGCTTGGCCTCATACTAACTTTAGCATCTGTTCTAATCTTCTGGCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR GCA 72 bp | TTGGCTAACGCATTCAGGACTCCTGAGACATGTTTTTaGACACACCTCTCCTCTGTCCCTGCACTATATCCA | + |
|
Preference number: 3 (lower is better) Translates to: LANAFRTPETCF*THLSSVPALYP Trigger: TGGATATAGTGCAGGGACAGAGGAGAGGTGTGTGCAAAAACATGTCTCAGGAGTCCTGAATGCGTTAGCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR CCA 72 bp | GGAGCAGCGGTAATTGAGTTTCAGTTACCTGCAGGGTaGCGAAATAAAGTGGTAACTTCATCTGCTGACATG | + |
|
Preference number: 3 (lower is better) Translates to: GAAVIEFQLPAG*RNKVVTSSADM Trigger: CATGTCAGCAGATGAAGTTACCACTTTATTTCGCCACCCTGCAGGTAACTGAAACTCAATTACCGCTGCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR CCA 72 bp | CTACAGAATATTTGTAAGGAAGAGAAACTGTACTTATaGTTATCTGCGGGGCAATGGACCGACCGTGCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LQNICKEEKLYL*LSAGQWTDRAR Trigger: CCTGGCACGGTCGGTCCATTGCCCCGCAGATAACCATAAGTACAGTTTCTCTTCCTTACAAATATTCTGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR CCA 72 bp | AGAAGGGAGGAAAACTCAAACACTACTTCCAGGAACTaGAAGCTCTCCAAGTGGGGAGAAAGAGTAGAGACA | + |
|
Preference number: 3 (lower is better) Translates to: RREENSNTTSRN*KLSKWGERVET Trigger: TGTCTCTACTCTTTCTCCCCACTTGGAGAGCTTCCAGTTCCTGGAAGTAGTGTTTGAGTTTTCCTCCCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR GCA 72 bp | GCTTCCACACACCAGTTTACAGTCTTCCTCCAGCCTTaGTATCTTTTTCAGGTTCTGTGTATGTGTTTGCGT | + |
|
Preference number: 3 (lower is better) Translates to: ASTHQFTVFLQP*YLFQVLCMCLR Trigger: ACGCAAACACATACACAGAACCTGAAAAAGATAGCAAGGCTGGAGGAAGACTGTAAACTGGTGTGTGGAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR CCA 72 bp | CCTTTTGGAGACAGAGTCTTGTTATATAGCTCCAACTaGTTTGGTACTTGCTACATAGCCCAAAGTGGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: PFGDRVLLYSSN*FGTCYIAQSGL Trigger: GAGGCCACTTTGGGCTATGTAGCAAGTACCAAACCAGTTGGAGCTATATAACAAGACTCTGTCTCCAAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR CCA 72 bp | CTTTTGGGTAGCAAGCAATTTGTTCTTAACTCACTCTaGACCCCTAAGTTAGGAGAACTCCTGGGTCGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: LLGSKQFVLNSL*TPKLGELLGRL Trigger: TAAGCGACCCAGGAGTTCTCCTAACTTAGGGGTCCAGAGTGAGTTAAGAACAAATTGCTTGCTACCCAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR TCA 72 bp | TTGAATCAGCCAGCCAAGTCTCAGAACAAGAAAGGGTaGGCTTATTCAGCAGTAAGTCTCAGAAGCGAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: LNQPAKSQNKKG*AYSAVSLRSEN Trigger: GTTTTCGCTTCTGAGACTTACTGCTGAATAAGCTCACCCTTTCTTGTTCTGAGACTTGGCTGGCTGATTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR TCA 72 bp | GCTCAGCCCTTAGCACACACCATTAATCCCAAACAATaGAGGCTGGAGTTAGTTTGTAGAAGGAAGCATGTA | + |
|
Preference number: 3 (lower is better) Translates to: AQPLAHTINPKQ*RLELVCRRKHV Trigger: TACATGCTTCCTTCTACAAACTAACTCCAGCCTTCATTGTTTGGGATTAATGGTGTGTGCTAAGGGCTGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR TCA 72 bp | GTGAACTTGAGGCTAGAGTCGGTTGTATTTATCCCATaGCCTCTGTACCTAGCACATAAGAATTCAGCACCA | + |
|
Preference number: 3 (lower is better) Translates to: VNLRLESVVFIP*PLYLAHKNSAP Trigger: TGGTGCTGAATTCTTATGTGCTAGGTACAGAGGTCATGGGATAAATACAACCGACTCTAGCCTCAAGTTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR GCA 72 bp | TTACAGGCAGGAGCCATCATGCTCAGTTCTGTAGTATaGTTCATGGGGGAAACTATGCCTCTTGTTTTAGTA | + |
|
Preference number: 3 (lower is better) Translates to: LQAGAIMLSSVV*FMGETMPLVLV Trigger: TACTAAAACAAGAGGCATAGTTTCCCCCATGAAGCATACTACAGAACTGAGCATGATGGCTCCTGCCTGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR CCA 72 bp | ACATCTTACCCTCCAGCTGACACCGATGACATCTTTTaGGTAGCAAGCAATTTGTTCTTAACTCACTCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: TSYPPADTDDIF*VASNLFLTHSG Trigger: TCCAGAGTGAGTTAAGAACAAATTGCTTGCTACCCAAAAGATGTCATCGGTGTCAGCTGGAGGGTAAGATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR GCA 72 bp | CACGTATGCATTTTTCTTCTTACAGCAGTAAGTCACTaGAAGAGAAATTTCATTATGCATCTTCAACAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: HVCIFLLTAVSH*KRNFIMHLQQR Trigger: CCTCTGTTGAAGATGCATAATGAAATTTCTCTTGCAGTGACTTACTGCTGTAAGAAGAAAAATGCATACGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR GCA 72 bp | AACTTGACCAATCCAAATGCTTTAGAAACTGCCTGTTaGAGGATATTTGATCACACTGTGAGATTGCTATTT | + |
|
Preference number: 3 (lower is better) Translates to: NLTNPNALETAC*RIFDHTVRLLF Trigger: AAATAGCAATCTCACAGTGTGATCAAATATCCTGCAACAGGCAGTTTCTAAAGCATTTGGATTGGTCAAGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR CAA 72 bp | CCACTCCCTGCGCCCGCCCTCCCCGACCCCATGTGGTaGAGCTTCTGCTCCCTGCATGAGCAACAGTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PLPAPALPDPMW*SFCSLHEQQWP Trigger: GGGCCACTGTTGCTCATGCAGGGAGCAGAAGCTCAACCACATGGGGTCGGGGAGGGCGGGCGCAGGGAGTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR CAA 72 bp | CGAGGCCCGGTGCTGGGCCCGTCCCCGGGTCACTTTTaGTGGGTCTGTACAAACGTGCCGACCGGCAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: RGPVLGPSPGHF*WVCTNVPTGSA Trigger: AGCGCTGCCGGTCGGCACGTTTGTACAGACCCACAAAAAGTGACCCGGGGACGGGCCCAGCACCGGGCCTCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127720.8 |
||
| CDS-3UTR GCA 90 bp | ACATCCGCATCACCCAAACTCAAAAGAGGCTTTGAATGGTGGCGCGAGGCCCGGGGGTCTGTACAAACGTaGCGACCGGCAGCGCTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: TSASPKLKRGFEWWREARGSVQT*RPAALR Trigger: GCGGAGCGCTGCCGGTCGGCACGTTTGTACAGACCC...CCGGGCCTCGCGCCACCATTCAAAGCCTCTTTTGAGTTTGGGTGATGCGGATGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030362.12 ENSMUST00000057043.10 |
||
| 3UTR CAA 72 bp | AGCCAACATCCGCATCACCCAAACTCAAAAGAGGCTTaGAATGGTGGCGCGAGGCCCGGTGCTGGGCCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: SQHPHHPNSKEA*NGGARPGAGPV Trigger: GACGGGCCCAGCACCGGGCCTCGCGCCACCATTCAAAGCCTCTTTTGAGTTTGGGTGATGCGGATGTTGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030362.12 ENSMUST00000057043.10 ENSMUST00000127720.8 |
||
| CDS-3UTR GCA 90 bp | CAGCGCAAGGCAGCTAATGAAGCCGCCCCCACAGGCCTATCTCCCAGGGCTCCCCGGATCTCAGCTCGGTaGTTTAATGTGAAGACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QRKAANEAAPTGLSPRAPRISAR*FNVKTR Trigger: TCTGGTCTTCACATTAAAGCACCGAGCTGAGATCCG...GGGAGCCCTGGGAGATAGGCCTGTGGGGGCGGCTTCATTAGCTGCCTTGCGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| CDS-3UTR GCA 90 bp | CAACATCCGCATCACCCAAACTCAAAAGAGGCTTTGAATGGTGGCGCGAGGCCCGCTCCGCTCTTCACCTaGTCCCGGATCTCAGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: QHPHHPNSKEALNGGARPAPLFT*SRISAR Trigger: CCGAGCTGAGATCCGGGAGCAGGTGAAGAGCGGAGC...GGGCCTCGCGCCACCATTCAAAGCCTCTTTTGAGTTTGGGTGATGCGGATGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030362.12 ENSMUST00000057043.10 |
||
| CDS-3UTR GCA 90 bp | CCAACATCCGCATCACCCAAACTCAAAAGAGGCTTTGAATGGTGGCGCGAGGCCGCTCCGCTCTTCACCTaGTCCCGGATCTCAGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: PTSASPKLKRGFEWWREAAPLFT*SRISAR Trigger: CCGAGCTGAGATCCGGGAGCAGGTGAAGAGCGGAGC...GGCCTCGCGCCACCATTCAAAGCCTCTTTTGAGTTTGGGTGATGCGGATGTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030362.12 ENSMUST00000057043.10 |
||
| CDS-3UTR TCA 90 bp | TCACCCAAACTCAAAAGAGGCTTTGAATGGTGGCGCGAGGCCCGGTGCTGGGCCAGCCGGGAGCAGAGATaGAACGTTTCCCGCTCAATA | + |
|
Preference number: 4 (lower is better) Translates to: SPKLKRGFEWWREARCWASREQR*NVSRSI Trigger: TATTGAGCGGGAAACGTTTCATCTCTGCTCCCGGCT...GGCCCAGCACCGGGCCTCGCGCCACCATTCAAAGCCTCTTTTGAGTTTGGGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030362.12 ENSMUST00000057043.10 |
||
| CDS-3UTR TCA 90 bp | CCGCATCACCCAAACTCAAAAGAGGCTTTGAATGGTGGCGCGAGGCCCGGTGCTCTCGGTGCTTTAATGTaGAGACCAGAGCGCGTACCG | + |
|
Preference number: 4 (lower is better) Translates to: PHHPNSKEALNGGARPGALGALM*RPERVP Trigger: CGGTACGCGCTCTGGTCTTCACATTAAAGCACCGAG...AGCACCGGGCCTCGCGCCACCATTCAAAGCCTCTTTTGAGTTTGGGTGATGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030362.12 ENSMUST00000057043.10 |
||
| CDS-3UTR CCA 90 bp | CAACAGTGGCCCTCCCTTCTCGAGCCAGCAACCTGCCCCCTCTCCCCCTCCCCCTCAACGACTCAATCGTaGCTTGCTTGTAAACCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QQWPSLLEPATCPLSPSPSTTQS*LACKPF Trigger: AAAAGGTTTACAAGCAAGCCACGATTGAGTCGTTGA...GGGGGAGGGGGAGAGGGGGCAGGTTGCTGGCTCGAGAAGGGAGGGCCACTGTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| CDS-3UTR GCA 90 bp | CCCAAACTCAAAAGAGGCTTTGAATGGTGGCGCGAGGCCCGGTGCTGGGCCCGTCGGATCTCAGCTCGGTaGTTTAATGTGAAGACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PKLKRGFEWWREARCWARRISAR*FNVKTR Trigger: TCTGGTCTTCACATTAAAGCACCGAGCTGAGATCCG...ACGGGCCCAGCACCGGGCCTCGCGCCACCATTCAAAGCCTCTTTTGAGTTTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030362.12 ENSMUST00000057043.10 |
||
| CDS-3UTR CCA 90 bp | CCCAAACTCAAAAGAGGCTTTGAATGGTGGCGCGAGGCCCGGTGCTGGGCCCGTTTCTTCGGGCTATTCTaGATCCTAGGCGTTCGAATG | + |
|
Preference number: 4 (lower is better) Translates to: PKLKRGFEWWREARCWARFFGLF*ILGVRM Trigger: CATTCGAACGCCTAGGATCCAGAATAGCCCGAAGAA...ACGGGCCCAGCACCGGGCCTCGCGCCACCATTCAAAGCCTCTTTTGAGTTTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030362.12 ENSMUST00000057043.10 ENSMUST00000127720.8 |
||
| CDS-3UTR CCA 90 bp | CATCACCCAAACTCAAAAGAGGCTTTGAATGGTGGCGCGAGGCCCGGTGCTGGGCATGACCTATCCTTGTaGATCTCAACACCTCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: HHPNSKEALNGGARPGAGHDLSL*ISTPPS Trigger: CGAGGGAGGTGTTGAGATCCACAAGGATAGGTCATG...CCCAGCACCGGGCCTCGCGCCACCATTCAAAGCCTCTTTTGAGTTTGGGTGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030362.12 ENSMUST00000057043.10 |
||
| CDS-3UTR TCA 90 bp | CCGACTCTTGCAAGTTGTCCTCTGGCCTCCACACGTAAACCACAGCATGCACCAAGCCGGGAGCAGAGATaGAACGTTTCCCGCTCAATA | + |
|
Preference number: 4 (lower is better) Translates to: PTLASCPLASTRKPQHAPSREQR*NVSRSI Trigger: TATTGAGCGGGAAACGTTTCATCTCTGCTCCCGGCT...TGGTGCATGCTGTGGTTTACGTGTGGAGGCCAGAGGACAACTTGCAAGAGTCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR CAA 72 bp | CTTGGCAAGCTCACAGTGAAACCTGTCACCCTTCCATaGTGCTGGGTGATGGTGACTGGATGGCACTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGKLTVKPVTLP*CWVMVTGWHFP Trigger: TGGGAAGTGCCATCCAGTCACCATCACCCAGCACAATGGAAGGGTGACAGGTTTCACTGTGAGCTTGCCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057043.10 ENSMUST00000127720.8 |
||
| 3UTR CAA 72 bp | GGCAATGGACCGACCGTGCCAGGAAATTTGATAAGGTaGTGTGGATTCGGAAGCCCGGCACCTCATACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GNGPTVPGNLIR*CGFGSPAPHTR Trigger: TCTGGTATGAGGTGCCGGGCTTCCGAATCCACACAACCTTATCAAATTTCCTGGCACGGTCGGTCCATTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| CDS-3UTR TCA 90 bp | CACCCAAACTCAAAAGAGGCTTTGAATGGTGGCGCGAGGCCCGGTGCTGGGCCCAGGTTTTCTTTGGTTTaGTCAGGAAGCTCCAACATA | + |
|
Preference number: 4 (lower is better) Translates to: HPNSKEALNGGARPGAGPRFSLV*SGSSNI Trigger: TATGTTGGAGCTTCCTGATCAAACCAAAGAAAACCT...GGGCCCAGCACCGGGCCTCGCGCCACCATTCAAAGCCTCTTTTGAGTTTGGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030362.12 ENSMUST00000057043.10 |
||
| CDS-3UTR TCA 90 bp | TCCGCATCACCCAAACTCAAAAGAGGCTTTGAATGGTGGCGCGAGGCCCGGTGCATCTTGTTCACAGCATaGCCTATCCTTGTGGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: SASPKLKRGFEWWREARCILFTA*PILVDL Trigger: GAGATCCACAAGGATAGGTCATGCTGTGAACAAGAT...GCACCGGGCCTCGCGCCACCATTCAAAGCCTCTTTTGAGTTTGGGTGATGCGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030362.12 ENSMUST00000057043.10 |
||
| CDS-3UTR TCA 90 bp | CATCACCCAAACTCAAAAGAGGCTTTGAATGGTGGCGCGAGGCCCGGTGCTGGGATCTTGTTCACAGCATaGCCTATCCTTGTGGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: HHPNSKEALNGGARPGAGILFTA*PILVDL Trigger: GAGATCCACAAGGATAGGTCATGCTGTGAACAAGAT...CCCAGCACCGGGCCTCGCGCCACCATTCAAAGCCTCTTTTGAGTTTGGGTGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030362.12 ENSMUST00000057043.10 |
||
| CDS-3UTR TCA 90 bp | CCCAAACTCAAAAGAGGCTTTGAATGGTGGCGCGAGGCCCGGTGCTGGGCCCGTTTTTCAACCAGTAGGTaGTCCATCTTCAATTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PKLKRGFEWWREARCWARFSTSR*SIFNSK Trigger: CTTGGAATTGAAGATGGATCACCTACTGGTTGAAAA...ACGGGCCCAGCACCGGGCCTCGCGCCACCATTCAAAGCCTCTTTTGAGTTTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030362.12 ENSMUST00000057043.10 |
||
| CDS-3UTR CCA 90 bp | CACCCAAACTCAAAAGAGGCTTTGAATGGTGGCGCGAGGCCCGGTGCTGGGCCCCAACTAGGTTTTCTTTaGTTTGATCAGGAAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HPNSKEALNGGARPGAGPQLGFL*FDQEAP Trigger: TGGAGCTTCCTGATCAAACCAAAGAAAACCTAGTTG...GGGCCCAGCACCGGGCCTCGCGCCACCATTCAAAGCCTCTTTTGAGTTTGGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030362.12 ENSMUST00000057043.10 |
||
| CDS-3UTR CCA 90 bp | CAACATCCGCATCACCCAAACTCAAAAGAGGCTTTGAATGGTGGCGCGAGGCCCTTCTTCGGGCTATTCTaGATCCTAGGCGTTCGAATG | + |
|
Preference number: 4 (lower is better) Translates to: QHPHHPNSKEALNGGARPFFGLF*ILGVRM Trigger: CATTCGAACGCCTAGGATCCAGAATAGCCCGAAGAA...GGGCCTCGCGCCACCATTCAAAGCCTCTTTTGAGTTTGGGTGATGCGGATGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030362.12 ENSMUST00000057043.10 ENSMUST00000127720.8 |
||
| CDS-3UTR CCA 90 bp | CCAACATCCGCATCACCCAAACTCAAAAGAGGCTTTGAATGGTGGCGCGAGGCCCAGTGTAAACTTCTTTaGCAAGACCAGCCACCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PTSASPKLKRGFEWWREAQCKLL*QDQPPL Trigger: CAGAGGTGGCTGGTCTTGCCAAAGAAGTTTACACTG...GGCCTCGCGCCACCATTCAAAGCCTCTTTTGAGTTTGGGTGATGCGGATGTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030362.12 ENSMUST00000057043.10 |
||
| CDS-3UTR TCA 90 bp | TATCCAGCACAGCCAACATCCGCATCACCCAAACTCAAAAGAGGCTTTGAATGGCTCGGTGCTTTAATGTaGAGACCAGAGCGCGTACCG | + |
|
Preference number: 4 (lower is better) Translates to: YPAQPTSASPKLKRGFEWLGALM*RPERVP Trigger: CGGTACGCGCTCTGGTCTTCACATTAAAGCACCGAG...CCATTCAAAGCCTCTTTTGAGTTTGGGTGATGCGGATGTTGGCTGTGCTGGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| CDS-3UTR CCA 90 bp | CTTCCACTCAGTGTAAACTTCTTTGGCAAGACCAGCCACCTCTGGGTCCGAGTGTTCTTCGGGCTATTCTaGATCCTAGGCGTTCGAATG | + |
|
Preference number: 4 (lower is better) Translates to: LPLSVNFFGKTSHLWVRVFFGLF*ILGVRM Trigger: CATTCGAACGCCTAGGATCCAGAATAGCCCGAAGAA...CACTCGGACCCAGAGGTGGCTGGTCTTGCCAAAGAAGTTTACACTGAGTGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127720.8 |
||
| CDS-3UTR CCA 90 bp | CATCACCCAAACTCAAAAGAGGCTTTGAATGGTGGCGCGAGGCCCGGTGCTGGGTCAACGACTCAATCGTaGCTTGCTTGTAAACCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: HHPNSKEALNGGARPGAGSTTQS*LACKPF Trigger: AAAAGGTTTACAAGCAAGCCACGATTGAGTCGTTGA...CCCAGCACCGGGCCTCGCGCCACCATTCAAAGCCTCTTTTGAGTTTGGGTGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030362.12 ENSMUST00000057043.10 ENSMUST00000127720.8 |
||
| CDS-3UTR CCA 90 bp | CATCACCCAAACTCAAAAGAGGCTTTGAATGGTGGCGCGAGGCCCGGTGCTGGGCAACTAGGTTTTCTTTaGTTTGATCAGGAAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HHPNSKEALNGGARPGAGQLGFL*FDQEAP Trigger: TGGAGCTTCCTGATCAAACCAAAGAAAACCTAGTTG...CCCAGCACCGGGCCTCGCGCCACCATTCAAAGCCTCTTTTGAGTTTGGGTGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030362.12 ENSMUST00000057043.10 |
||
| CDS-3UTR CCA 90 bp | CCTATCACTCATCTCAGACCAGGGAACACTTGCAATGCAGACAGCATCCTCCCTCATGACCTATCCTTGTaGATCTCAACACCTCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PITHLRPGNTCNADSILPHDLSL*ISTPPS Trigger: CGAGGGAGGTGTTGAGATCCACAAGGATAGGTCATG...AGGGAGGATGCTGTCTGCATTGCAAGTGTTCCCTGGTCTGAGATGAGTGATAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| 3UTR CAA 72 bp | GCAATGCAGACAGCATCCTCCCTGACCCTTCCATCCTaGCTTTGCAAACAATCCCTTTCCCTTTCCTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: AMQTASSLTLPS*LCKQSLSLSFP Trigger: TGGGAAGGAAAGGGAAAGGGATTGTTTGCAAAGCAAGGATGGAAGGGTCAGGGAGGATGCTGTCTGCATTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| CDS-3UTR CCA 90 bp | GTTCTGTCTGAAGGAATGGCACCATGGGAATATCCAGCACAGCCAACATCCGCACAGTGTAAACTTCTTTaGCAAGACCAGCCACCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VLSEGMAPWEYPAQPTSAQCKLL*QDQPPL Trigger: CAGAGGTGGCTGGTCTTGCCAAAGAAGTTTACACTG...TGCGGATGTTGGCTGTGCTGGATATTCCCATGGTGCCATTCCTTCAGACAGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| CDS-3UTR TCA 90 bp | GAAATGGTCTGTTTAGGACCAGAGAGACGGCTGAGTATGGTAAAGGCAGTTGCCAGGTTTTCTTTGGTTTaGTCAGGAAGCTCCAACATA | + |
|
Preference number: 4 (lower is better) Translates to: EMVCLGPERRLSMVKAVARFSLV*SGSSNI Trigger: TATGTTGGAGCTTCCTGATCAAACCAAAGAAAACCT...GGCAACTGCCTTTACCATACTCAGCCGTCTCTCTGGTCCTAAACAGACCATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| CDS-3UTR CAA 90 bp | TCACCCAAACTCAAAAGAGGCTTTGAATGGTGGCGCGAGGCCCGGTGCTGGGCCCAGCATGACCTATCCTaGTGGATCTCAACACCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SPKLKRGFEWWREARCWAQHDLS*WISTPP Trigger: GGGAGGTGTTGAGATCCACAAGGATAGGTCATGCTG...GGCCCAGCACCGGGCCTCGCGCCACCATTCAAAGCCTCTTTTGAGTTTGGGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030362.12 ENSMUST00000057043.10 |
||
| CDS-3UTR CAA 90 bp | ACATCCGCATCACCCAAACTCAAAAGAGGCTTTGAATGGTGGCGCGAGGCCCGGCAGCATGACCTATCCTaGTGGATCTCAACACCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: TSASPKLKRGFEWWREARQHDLS*WISTPP Trigger: GGGAGGTGTTGAGATCCACAAGGATAGGTCATGCTG...CCGGGCCTCGCGCCACCATTCAAAGCCTCTTTTGAGTTTGGGTGATGCGGATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030362.12 ENSMUST00000057043.10 |
||
| CDS CCA 90 bp | AGTCTTCCACTCAGTGTAAACTTCTTTGGCAAGACCAGCCACCTCTaGGTCCGAGTGCCTGCGCATCTTGTTCACAGCATGACCTATCCT | + |
|
Preference number: 5 (lower is better) Translates to: SLPLSVNFFGKTSHL*VRVPAHLVHSMTYP Trigger: AGGATAGGTCATGCTGTGAACAAGATGCGCAGGCACTCGGACCCAGAGGTGGCTGGTCTTGCCAAAGAAGTTTACACTGAGTGGAAGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030362.12 ENSMUST00000057043.10 ENSMUST00000058585.14 ENSMUST00000141165.2 |
||
| CDS-3UTR CAA 90 bp | CAACATCCGCATCACCCAAACTCAAAAGAGGCTTTGAATGGTGGCGCGAGGCCCCGACTCAATCGTGGCTaGCTTGTAAACCTTTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QHPHHPNSKEALNGGARPRLNRG*LVNLFS Trigger: GGAGAAAAGGTTTACAAGCAAGCCACGATTGAGTCG...GGGCCTCGCGCCACCATTCAAAGCCTCTTTTGAGTTTGGGTGATGCGGATGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030362.12 ENSMUST00000057043.10 ENSMUST00000127720.8 |
||
| CDS-3UTR CAA 90 bp | GCTAGGATAAAAGGTGTGTGCCACCAACCTGGCCTCCCTCCAGTTCTCATCCCACGACTCAATCGTGGCTaGCTTGTAAACCTTTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ARIKGVCHQPGLPPVLIPRLNRG*LVNLFS Trigger: GGAGAAAAGGTTTACAAGCAAGCCACGATTGAGTCG...TGGGATGAGAACTGGAGGGAGGCCAGGTTGGTGGCACACACCTTTTATCCTAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057043.10 |
||
| CDS GCA 90 bp | TGTAAACTTCTTTGGCAAGACCAGCCACCTCTGGGTCCGAGTGCCTaGGCATCTTGTTCACAGCATGACCTATCCTTGTGGATCTCAACA | + |
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Preference number: 5 (lower is better) Translates to: CKLLWQDQPPLGPSA*ASCSQHDLSLWIST Trigger: TGTTGAGATCCACAAGGATAGGTCATGCTGTGAACAAGATGCGCAGGCACTCGGACCCAGAGGTGGCTGGTCTTGCCAAAGAAGTTTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030362.12 ENSMUST00000057043.10 ENSMUST00000058585.14 ENSMUST00000141165.2 |
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| CDS-3UTR CAA 90 bp | TTTTGGATCGCTCCGGACTTCAATAGAAGGTCTGTCCAAATGTTTTTCAATGAACGACTCAATCGTGGCTaGCTTGTAAACCTTTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: FWIAPDFNRRSVQMFFNERLNRG*LVNLFS Trigger: GGAGAAAAGGTTTACAAGCAAGCCACGATTGAGTCG...TTCATTGAAAAACATTTGGACAGACCTTCTATTGAAGTCCGGAGCGATCCAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000127720.8 |
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| CDS GCA 72 bp | CTTTGGCAAGACCAGCCACCTCTGGGTCCGAGTGCCTaGGCATCTTGTTCACAGCATGACCTATCCTTGTGG | + |
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Preference number: 6 (lower is better) Translates to: LWQDQPPLGPSA*ASCSQHDLSLW Trigger: CCACAAGGATAGGTCATGCTGTGAACAAGATGCGCAGGCACTCGGACCCAGAGGTGGCTGGTCTTGCCAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030362.12 ENSMUST00000057043.10 ENSMUST00000058585.14 ENSMUST00000141165.2 |
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| CDS TCA 72 bp | TCTGGGTCCGAGTGCCTGCGCATCTTGTTCACAGCATaGCCTATCCTTGTGGATCTCAACACCTCCCTCGAG | + |
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Preference number: 6 (lower is better) Translates to: SGSECLRILFTA*PILVDLNTSLE Trigger: CTCGAGGGAGGTGTTGAGATCCACAAGGATAGGTCATGCTGTGAACAAGATGCGCAGGCACTCGGACCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030362.12 ENSMUST00000057043.10 ENSMUST00000058585.14 ENSMUST00000141165.2 |
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| CDS CCA 72 bp | GCCTGCGCATCTTGTTCACAGCATGACCTATCCTTGTaGATCTCAACACCTCCCTCGAGGGCATTTTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: ACASCSQHDLSL*ISTPPSRAFSS Trigger: AGAAGAAAATGCCCTCGAGGGAGGTGTTGAGATCCACAAGGATAGGTCATGCTGTGAACAAGATGCGCAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030362.12 ENSMUST00000057043.10 ENSMUST00000058585.14 ENSMUST00000141165.2 |
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| CDS CAA 72 bp | AGTGCCTGCGCATCTTGTTCACAGCATGACCTATCCTaGTGGATCTCAACACCTCCCTCGAGGGCATTTTCT | + |
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Preference number: 6 (lower is better) Translates to: SACASCSQHDLS*WISTPPSRAFS Trigger: AGAAAATGCCCTCGAGGGAGGTGTTGAGATCCACAAGGATAGGTCATGCTGTGAACAAGATGCGCAGGCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030362.12 ENSMUST00000057043.10 ENSMUST00000058585.14 ENSMUST00000141165.2 |
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| CDS CAA 72 bp | TATAACCACAACTCTCTTCAACGACTCAATCGTGGCTaGCTTGTAAACCTTTTCTCCGAGTTTCTTCTTCGG | + |
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Preference number: 6 (lower is better) Translates to: YNHNSLQRLNRG*LVNLFSEFLLR Trigger: CCGAAGAAGAAACTCGGAGAAAAGGTTTACAAGCAAGCCACGATTGAGTCGTTGAAGAGAGTTGTGGTTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030362.12 ENSMUST00000057043.10 ENSMUST00000058585.14 ENSMUST00000141165.2 |
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| CDS TCA 72 bp | AATTCTTGTAAGGCAGCAACTAGGTTTTCTTTGGTTTaGTCAGGAAGCTCCAACATAGTTTTCCATCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: NSCKAATRFSLV*SGSSNIVFHLF Trigger: AAAAAGATGGAAAACTATGTTGGAGCTTCCTGATCAAACCAAAGAAAACCTAGTTGCTGCCTTACAAGAATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030362.12 ENSMUST00000057043.10 ENSMUST00000058585.14 ENSMUST00000141165.2 |
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