Pregenerated sensors for TCEAL8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051579Ensembl transcript IDs: ENSMUST00000060101.10, ENSMUST00000146583.2, ENSMUST00000163584.8
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCATGAATCCCAGCCTAGCTAGCCTGGGCTACAGAATAAGACATTaGTTCAAACCAAACAAACTGCCAGCTATAGTGGCACCACCTGTA | + |
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Preference number: 1 (lower is better) Translates to: AMNPSLASLGYRIRH*FKPNKLPAIVAPPV Trigger: TACAGGTGGTGCCACTATAGCTGGCAGTTTGTTTGGTTTGAAGCAATGTCTTATTCTGTAGCCCAGGCTAGCTAGGCTGGGATTCATGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163584.8 |
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| 3UTR TCA 90 bp | ATACTATGTTCCACACAGATCCCTGTGAGGCAAGTATTTCCCCCATaGAAAGACCAAGTCTTAACCAAGTGTGTCTATAATGATTGCCAG | + |
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Preference number: 1 (lower is better) Translates to: ILCSTQIPVRQVFPP*KDQVLTKCVYNDCQ Trigger: CTGGCAATCATTATAGACACACTTGGTTAAGACTTGGTCTTTTCATGGGGGAAATACTTGCCTCACAGGGATCTGTGTGGAACATAGTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163584.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCTCTGGTTGCTTTTCCAGAGGTCGGCTGGGGGTTCAACTaGAATTCAAGGAAACCCAGC | + |
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Preference number: 2 (lower is better) Translates to: GAGEMAQWLRALVAFPEVGWGFN*NSRKPS Trigger: GCTGGGTTTCCTTGAATTCCAGTTGAACCCCCAGCC...GACCTCTGGAAAAGCAACCAGAGCTCTTAACCACTGAGCCATCTCTCCAGCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000163584.8 |
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| 3UTR-3UTR CCA 90 bp | TGTCTGTGTAGAGACCAGAAAAGGGCACCAGATCCCCTGTCACTGGAGTTAAAGTCAGCAGAAGAAAAATaGCACGGAAGCCCAGCCCCC | + |
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Preference number: 2 (lower is better) Translates to: CLCRDQKRAPDPLSLELKSAEEK*HGSPAP Trigger: GGGGGCTGGGCTTCCGTGCCATTTTTCTTCTGCTGA...CTTTAACTCCAGTGACAGGGGATCTGGTGCCCTTTTCTGGTCTCTACACAGACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000163584.8 |
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| 3UTR-3UTR TCA 90 bp | GGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCTCTGGTTGCTTTTCCAGAGGTCCAAGTATTTCCCCCATaGAAAGACCAAGTCTTAACC | + |
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Preference number: 2 (lower is better) Translates to: GAGEMAQWLRALVAFPEVQVFPP*KDQVLT Trigger: GGTTAAGACTTGGTCTTTTCATGGGGGAAATACTTG...GACCTCTGGAAAAGCAACCAGAGCTCTTAACCACTGAGCCATCTCTCCAGCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000163584.8 |
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| 3UTR-3UTR TCA 90 bp | AGAATAAGACATTGCTTCAAACCAAACAAACTGCCAGCTATAGTGGCACCACCTAAATCCAAAATCCAATaGGATGCTGGTAACAACGAA | + |
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Preference number: 2 (lower is better) Translates to: RIRHCFKPNKLPAIVAPPKSKIQ*DAGNNE Trigger: TTCGTTGTTACCAGCATCTCATTGGATTTTGGATTT...AGGTGGTGCCACTATAGCTGGCAGTTTGTTTGGTTTGAAGCAATGTCTTATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163584.8 |
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| 3UTR-3UTR GCA 90 bp | AGAATAAGACATTGCTTCAAACCAAACAAACTGCCAGCTATAGTGGCACCACCTTGTGTCTATAATGATTaGCAGTTTTATTCCTCTGGC | + |
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Preference number: 2 (lower is better) Translates to: RIRHCFKPNKLPAIVAPPCVYND*QFYSSG Trigger: GCCAGAGGAATAAAACTGGCAATCATTATAGACACA...AGGTGGTGCCACTATAGCTGGCAGTTTGTTTGGTTTGAAGCAATGTCTTATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163584.8 |
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| 3UTR GCA 72 bp | GATCCCCGGCATCAACTGAAAGCGGCGGCACCCACCTaGAACGCTCGCTCACCCTCGGGAAGAGGGGTCTTG | + |
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Preference number: 3 (lower is better) Translates to: DPRHQLKAAAPT*NARSPSGRGVL Trigger: CAAGACCCCTCTTCCCGAGGGTGAGCGAGCGTTGCAGGTGGGTGCCGCCGCTTTCAGTTGATGCCGGGGATC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163584.8 |
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| 3UTR CCA 72 bp | GCTATAGTGGCACCACCTGTAACTGAACACTGGGGCTaGGGGTTCAACTGGAATTCAAGGAAACCCAGCGGG | + |
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Preference number: 3 (lower is better) Translates to: AIVAPPVTEHWG*GFNWNSRKPSG Trigger: CCCGCTGGGTTTCCTTGAATTCCAGTTGAACCCCCAGCCCCAGTGTTCAGTTACAGGTGGTGCCACTATAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163584.8 |
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| 3UTR CCA 72 bp | ATGTGTATTATGTTGGGGGCTGGAGAGATGGCTCAGTaGTTAAGAGCTCTGGTTGCTTTTCCAGAGGTCCCG | + |
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Preference number: 3 (lower is better) Translates to: MCIMLGAGEMAQ*LRALVAFPEVP Trigger: CGGGACCTCTGGAAAAGCAACCAGAGCTCTTAACCACTGAGCCATCTCTCCAGCCCCCAACATAATACACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163584.8 |
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| 3UTR TCA 72 bp | AAACAAACTGCCAGCTATAGTGGCACCACCTGTAACTaGACACTGGGGCTGGGGGTTCAACTGGAATTCAAG | + |
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Preference number: 3 (lower is better) Translates to: KQTASYSGTTCN*TLGLGVQLEFK Trigger: CTTGAATTCCAGTTGAACCCCCAGCCCCAGTGTTCAGTTACAGGTGGTGCCACTATAGCTGGCAGTTTGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163584.8 |
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| 3UTR CCA 72 bp | CCACCTGTAACTGAACACTGGGGCTGGGGGTTCAACTaGAATTCAAGGAAACCCAGCGGGATCTTTATACTT | + |
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Preference number: 3 (lower is better) Translates to: PPVTEHWGWGFN*NSRKPSGIFIL Trigger: AAGTATAAAGATCCCGCTGGGTTTCCTTGAATTCCAGTTGAACCCCCAGCCCCAGTGTTCAGTTACAGGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163584.8 |
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| 3UTR GCA 72 bp | CCCAGCCTAGCTAGCCTGGGCTACAGAATAAGACATTaGTTCAAACCAAACAAACTGCCAGCTATAGTGGCA | + |
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Preference number: 3 (lower is better) Translates to: PSLASLGYRIRH*FKPNKLPAIVA Trigger: TGCCACTATAGCTGGCAGTTTGTTTGGTTTGAAGCAATGTCTTATTCTGTAGCCCAGGCTAGCTAGGCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163584.8 |
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| CDS-3UTR CCA 90 bp | GGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCTCTGGTTGCTTTTCCAGAGGTCGTCCTCTTTGGGCTCTaGGCTGGGTTCAGCAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: GAGEMAQWLRALVAFPEVVLFGL*AGFSRL Trigger: GAGCCTGCTGAACCCAGCCCAGAGCCCAAAGAGGAC...GACCTCTGGAAAAGCAACCAGAGCTCTTAACCACTGAGCCATCTCTCCAGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163584.8 |
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| 3UTR CAA 72 bp | TTATACTTAAGACCCCACTGGCAGGATCCAGCAGACTaGGCCCTAGTTGGTAGGCAGGACAGGTCCCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: LYLRPHWQDPAD*ALVGRQDRSQG Trigger: TCCCTGGGACCTGTCCTGCCTACCAACTAGGGCCAAGTCTGCTGGATCCTGCCAGTGGGGTCTTAAGTATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163584.8 |
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| CDS-3UTR CCA 90 bp | GGACAGGTCCCAGGGAAGAAAAGGGTGGGAACTCAGCAGAAGAAAAATGGCACGGCAGGCTCTCCTCTATaGCTCCCTTCAGTTTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: GQVPGKKRVGTQQKKNGTAGSPL*LPSVSS Trigger: GGAGGAAACTGAAGGGAGCCATAGAGGAGAGCCTGC...CGTGCCATTTTTCTTCTGCTGAGTTCCCACCCTTTTCTTCCCTGGGACCTGTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163584.8 |
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| CDS-3UTR GCA 90 bp | TGTCTGTGTAGAGACCAGAAAAGGGCACCAGATCCCCTGTCACTGGAGTTAAAGGGGGTTCAGATGCCTTaGGGGAGTGTCCTCTTTGGG | + |
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Preference number: 4 (lower is better) Translates to: CLCRDQKRAPDPLSLELKGVQMP*GSVLFG Trigger: CCCAAAGAGGACACTCCCGCAAGGCATCTGAACCCC...CTTTAACTCCAGTGACAGGGGATCTGGTGCCCTTTTCTGGTCTCTACACAGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000163584.8 |
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| CDS-3UTR GCA 90 bp | GGACAGGTCCCAGGGAAGAAAAGGGTGGGAACTCAGCAGAAGAAAAATGGCACGAGAGTTTCTCCTGCCTaGTGTGGTGGATCTTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: GQVPGKKRVGTQQKKNGTRVSPA*CGGSSE Trigger: TTCAGAAGATCCACCACAGCAGGCAGGAGAAACTCT...CGTGCCATTTTTCTTCTGCTGAGTTCCCACCCTTTTCTTCCCTGGGACCTGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163584.8 |
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| CDS-3UTR CCA 90 bp | GGACAGGTCCCAGGGAAGAAAAGGGTGGGAACTCAGCAGAAGAAAAATGGCACGGGATCTTCTGAAGGATaGCCTTCGTCTGCTTTTGGT | + |
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Preference number: 4 (lower is better) Translates to: GQVPGKKRVGTQQKKNGTGSSEG*PSSAFG Trigger: ACCAAAAGCAGACGAAGGCCATCCTTCAGAAGATCC...CGTGCCATTTTTCTTCTGCTGAGTTCCCACCCTTTTCTTCCCTGGGACCTGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000163584.8 |
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| CDS-3UTR GCA 90 bp | ATGTTCCACACAGATCCCTGTGAGGCAAGTATTTCCCCCATGAAAAGACCAAGTTCTTCGGGGTTCAGATaGCTTGCGGGAGTGTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: MFHTDPCEASISPMKRPSSSGFR*LAGVSS Trigger: AGAGGACACTCCCGCAAGGCATCTGAACCCCGAAGA...ACTTGGTCTTTTCATGGGGGAAATACTTGCCTCACAGGGATCTGTGTGGAACAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000163584.8 |
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| CDS-3UTR TCA 90 bp | AGAATAAGACATTGCTTCAAACCAAACAAACTGCCAGCTATAGTGGCACCACCTTTTTCTCCAGAAGCCTaGAGAGTTTCTCCTGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: RIRHCFKPNKLPAIVAPPFSPEA*RVSPAC Trigger: GCAGGCAGGAGAAACTCTTCAGGCTTCTGGAGAAAA...AGGTGGTGCCACTATAGCTGGCAGTTTGTTTGGTTTGAAGCAATGTCTTATTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163584.8 |
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| CDS-3UTR GCA 90 bp | ATGTTCCACACAGATCCCTGTGAGGCAAGTATTTCCCCCATGAAAAGACCAAGTCTTCGGGAATGTCTTTaGTTCCAATGCATCAACACG | + |
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Preference number: 4 (lower is better) Translates to: MFHTDPCEASISPMKRPSLRECL*FQCINT Trigger: CGTGTTGATGCATTGGAAGCAAAGACATTCCCGAAG...ACTTGGTCTTTTCATGGGGGAAATACTTGCCTCACAGGGATCTGTGTGGAACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163584.8 |
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| CDS-3UTR CCA 90 bp | AGAATAAGACATTGCTTCAAACCAAACAAACTGCCAGCTATAGTGGCACCACCTGCTTTTGGTGTGTTCTaGGGTGTTCCTTCGTTCTCG | + |
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Preference number: 4 (lower is better) Translates to: RIRHCFKPNKLPAIVAPPAFGVF*GVPSFS Trigger: CGAGAACGAAGGAACACCCCAGAACACACCAAAAGC...AGGTGGTGCCACTATAGCTGGCAGTTTGTTTGGTTTGAAGCAATGTCTTATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163584.8 |
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| CDS-3UTR GCA 90 bp | AGAATAAGACATTGCTTCAAACCAAACAAACTGCCAGCTATAGTGGCACCACCTTGTCTTTGCTTCCAATaGATCAACACGAACTTGTTT | + |
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Preference number: 4 (lower is better) Translates to: RIRHCFKPNKLPAIVAPPCLCFQ*INTNLF Trigger: AAACAAGTTCGTGTTGATGCATTGGAAGCAAAGACA...AGGTGGTGCCACTATAGCTGGCAGTTTGTTTGGTTTGAAGCAATGTCTTATTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163584.8 |
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| CDS CCA 90 bp | CGGGGTTCAGATGCCTTGCGGGAGTGTCCTCTTTGGGCTCTGGGCTaGGTTCAGCAGGCTCTCCTCTATGGCTCCCTTCAGTTTCCTCCC | + |
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Preference number: 5 (lower is better) Translates to: RGSDALRECPLWALG*VQQALLYGSLQFPP Trigger: GGGAGGAAACTGAAGGGAGCCATAGAGGAGAGCCTGCTGAACCCAGCCCAGAGCCCAAAGAGGACACTCCCGCAAGGCATCTGAACCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060101.10 ENSMUST00000163584.8 |
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| CDS-3UTR CAA 90 bp | GGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCTCTGGTTGCTTTTCCAGAGGTCGCGGGAGTGTCCTCTTaGGGCTCTGGGCTGGGTTCA | + |
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Preference number: 5 (lower is better) Translates to: GAGEMAQWLRALVAFPEVAGVSS*GSGLGS Trigger: TGAACCCAGCCCAGAGCCCAAAGAGGACACTCCCGC...GACCTCTGGAAAAGCAACCAGAGCTCTTAACCACTGAGCCATCTCTCCAGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163584.8 |
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| CDS CCA 90 bp | TTCTTCGGGGTTCAGATGCCTTGCGGGAGTGTCCTCTTTGGGCTCTaGGCTGGGTTCAGCAGGCTCTCCTCTATGGCTCCCTTCAGTTTC | + |
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Preference number: 5 (lower is better) Translates to: FFGVQMPCGSVLFGL*AGFSRLSSMAPFSF Trigger: GAAACTGAAGGGAGCCATAGAGGAGAGCCTGCTGAACCCAGCCCAGAGCCCAAAGAGGACACTCCCGCAAGGCATCTGAACCCCGAAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060101.10 ENSMUST00000163584.8 |
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| CDS-3UTR CAA 90 bp | GGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCTCTGGTTGCTTTTCCAGAGGTCCGGGGTTCAGATGCCTaGCGGGAGTGTCCTCTTTGG | + |
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Preference number: 5 (lower is better) Translates to: GAGEMAQWLRALVAFPEVRGSDA*RECPLW Trigger: CCAAAGAGGACACTCCCGCAAGGCATCTGAACCCCG...GACCTCTGGAAAAGCAACCAGAGCTCTTAACCACTGAGCCATCTCTCCAGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000163584.8 |
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| CDS GCA 90 bp | CAACTCATCTACGCCTCTTATCACTTCTTCGGGGTTCAGATGCCTTaGGGGAGTGTCCTCTTTGGGCTCTGGGCTGGGTTCAGCAGGCTC | + |
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Preference number: 5 (lower is better) Translates to: QLIYASYHFFGVQMP*GSVLFGLWAGFSRL Trigger: GAGCCTGCTGAACCCAGCCCAGAGCCCAAAGAGGACACTCCCGCAAGGCATCTGAACCCCGAAGAAGTGATAAGAGGCGTAGATGAGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060101.10 ENSMUST00000163584.8 |
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| CDS CCA 90 bp | TTATCACTTCTTCGGGGTTCAGATGCCTTGCGGGAGTGTCCTCTTTaGGCTCTGGGCTGGGTTCAGCAGGCTCTCCTCTATGGCTCCCTT | + |
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Preference number: 5 (lower is better) Translates to: LSLLRGSDALRECPL*ALGWVQQALLYGSL Trigger: AAGGGAGCCATAGAGGAGAGCCTGCTGAACCCAGCCCAGAGCCCAAAGAGGACACTCCCGCAAGGCATCTGAACCCCGAAGAAGTGATAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060101.10 ENSMUST00000163584.8 |
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| CDS TCA 90 bp | TCCAGAAGCCTGAAGAGTTTCTCCTGCCTGCTGTGGTGGATCTTCTaGAGGATGGCCTTCGTCTGCTTTTGGTGTGTTCTGGGGTGTTCC | + |
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Preference number: 5 (lower is better) Translates to: SRSLKSFSCLLWWIF*RMAFVCFWCVLGCS Trigger: GGAACACCCCAGAACACACCAAAAGCAGACGAAGGCCATCCTTCAGAAGATCCACCACAGCAGGCAGGAGAAACTCTTCAGGCTTCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060101.10 ENSMUST00000146583.2 ENSMUST00000163584.8 |
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| CDS-3UTR CAA 90 bp | TGTCTGTGTAGAGACCAGAAAAGGGCACCAGATCCCCTGTCACTGGAGTTAAAGTGCATCAACACGAACTaGTTTCTTACTCTTCTTATC | + |
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Preference number: 5 (lower is better) Translates to: CLCRDQKRAPDPLSLELKCINTN*FLTLLI Trigger: GATAAGAAGAGTAAGAAACAAGTTCGTGTTGATGCA...CTTTAACTCCAGTGACAGGGGATCTGGTGCCCTTTTCTGGTCTCTACACAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163584.8 |
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| CDS-3UTR CAA 90 bp | AGAATAAGACATTGCTTCAAACCAAACAAACTGCCAGCTATAGTGGCACCACCTGCTTCGGGAATGTCTTaGCTTCCAATGCATCAACAC | + |
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Preference number: 5 (lower is better) Translates to: RIRHCFKPNKLPAIVAPPASGMS*LPMHQH Trigger: GTGTTGATGCATTGGAAGCAAAGACATTCCCGAAGC...AGGTGGTGCCACTATAGCTGGCAGTTTGTTTGGTTTGAAGCAATGTCTTATTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163584.8 |
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| CDS CCA 72 bp | GATGCCTTGCGGGAGTGTCCTCTTTGGGCTCTGGGCTaGGTTCAGCAGGCTCTCCTCTATGGCTCCCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: DALRECPLWALG*VQQALLYGSLQ Trigger: CTGAAGGGAGCCATAGAGGAGAGCCTGCTGAACCCAGCCCAGAGCCCAAAGAGGACACTCCCGCAAGGCATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060101.10 ENSMUST00000163584.8 |
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| CDS CCA 72 bp | GTTCAGATGCCTTGCGGGAGTGTCCTCTTTGGGCTCTaGGCTGGGTTCAGCAGGCTCTCCTCTATGGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: VQMPCGSVLFGL*AGFSRLSSMAP Trigger: GGGAGCCATAGAGGAGAGCCTGCTGAACCCAGCCCAGAGCCCAAAGAGGACACTCCCGCAAGGCATCTGAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060101.10 ENSMUST00000163584.8 |
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| CDS CAA 72 bp | TCTTCGGGGTTCAGATGCCTTGCGGGAGTGTCCTCTTaGGGCTCTGGGCTGGGTTCAGCAGGCTCTCCTCTA | + |
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Preference number: 6 (lower is better) Translates to: SSGFRCLAGVSS*GSGLGSAGSPL Trigger: TAGAGGAGAGCCTGCTGAACCCAGCCCAGAGCCCAAAGAGGACACTCCCGCAAGGCATCTGAACCCCGAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060101.10 ENSMUST00000163584.8 |
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| CDS CAA 90 bp | CTTATCACTTCTTCGGGGTTCAGATGCCTTGCGGGAGTGTCCTCTTaGGGCTCTGGGCTGGGTTCAGCAGGCTCTCCTCTATGGCTCCCT | + |
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Preference number: 6 (lower is better) Translates to: LITSSGFRCLAGVSS*GSGLGSAGSPLWLP Trigger: AGGGAGCCATAGAGGAGAGCCTGCTGAACCCAGCCCAGAGCCCAAAGAGGACACTCCCGCAAGGCATCTGAACCCCGAAGAAGTGATAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060101.10 ENSMUST00000163584.8 |
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| CDS CAA 90 bp | CCAACTCATCTACGCCTCTTATCACTTCTTCGGGGTTCAGATGCCTaGCGGGAGTGTCCTCTTTGGGCTCTGGGCTGGGTTCAGCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: PTHLRLLSLLRGSDA*RECPLWALGWVQQA Trigger: AGCCTGCTGAACCCAGCCCAGAGCCCAAAGAGGACACTCCCGCAAGGCATCTGAACCCCGAAGAAGTGATAAGAGGCGTAGATGAGTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060101.10 ENSMUST00000163584.8 |
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| CDS GCA 72 bp | TACGCCTCTTATCACTTCTTCGGGGTTCAGATGCCTTaGGGGAGTGTCCTCTTTGGGCTCTGGGCTGGGTTC | + |
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Preference number: 6 (lower is better) Translates to: YASYHFFGVQMP*GSVLFGLWAGF Trigger: GAACCCAGCCCAGAGCCCAAAGAGGACACTCCCGCAAGGCATCTGAACCCCGAAGAAGTGATAAGAGGCGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060101.10 ENSMUST00000163584.8 |
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| CDS CAA 72 bp | CTACGCCTCTTATCACTTCTTCGGGGTTCAGATGCCTaGCGGGAGTGTCCTCTTTGGGCTCTGGGCTGGGTT | + |
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Preference number: 6 (lower is better) Translates to: LRLLSLLRGSDA*RECPLWALGWV Trigger: AACCCAGCCCAGAGCCCAAAGAGGACACTCCCGCAAGGCATCTGAACCCCGAAGAAGTGATAAGAGGCGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060101.10 ENSMUST00000163584.8 |
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| CDS CCA 72 bp | GTTTCTCCTGCCTGCTGTGGTGGATCTTCTGAAGGATaGCCTTCGTCTGCTTTTGGTGTGTTCTGGGGTGTT | + |
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Preference number: 6 (lower is better) Translates to: VSPACCGGSSEG*PSSAFGVFWGV Trigger: AACACCCCAGAACACACCAAAAGCAGACGAAGGCCATCCTTCAGAAGATCCACCACAGCAGGCAGGAGAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060101.10 ENSMUST00000146583.2 ENSMUST00000163584.8 |
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| CDS CAA 90 bp | CTGCCTGCTGTGGTGGATCTTCTGAAGGATGGCCTTCGTCTGCTTTaGGTGTGTTCTGGGGTGTTCCTTCGTTCTCGTCACAAGACTTTT | + |
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Preference number: 6 (lower is better) Translates to: LPAVVDLLKDGLRLL*VCSGVFLRSRHKTF Trigger: AAAAGTCTTGTGACGAGAACGAAGGAACACCCCAGAACACACCAAAAGCAGACGAAGGCCATCCTTCAGAAGATCCACCACAGCAGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060101.10 ENSMUST00000146583.2 ENSMUST00000163584.8 |
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| CDS TCA 72 bp | CTGAAGAGTTTCTCCTGCCTGCTGTGGTGGATCTTCTaGAGGATGGCCTTCGTCTGCTTTTGGTGTGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: LKSFSCLLWWIF*RMAFVCFWCVL Trigger: CAGAACACACCAAAAGCAGACGAAGGCCATCCTTCAGAAGATCCACCACAGCAGGCAGGAGAAACTCTTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060101.10 ENSMUST00000146583.2 ENSMUST00000163584.8 |
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| CDS CCA 72 bp | TCTGAAGGATGGCCTTCGTCTGCTTTTGGTGTGTTCTaGGGTGTTCCTTCGTTCTCGTCACAAGACTTTTGC | + |
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Preference number: 6 (lower is better) Translates to: SEGWPSSAFGVF*GVPSFSSQDFC Trigger: GCAAAAGTCTTGTGACGAGAACGAAGGAACACCCCAGAACACACCAAAAGCAGACGAAGGCCATCCTTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060101.10 ENSMUST00000146583.2 ENSMUST00000163584.8 |
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