Pregenerated sensors for TCEAL7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079428Ensembl transcript IDs: ENSMUST00000113116.3, ENSMUST00000126811.8
Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACGTGCCTTTCTCATACTTCTGTTACTAACAGTTTGCTGCTTCACTaGTTTCCTAACGCGATTGGTAAACCAATTTCATTCATGTCTAAT | + |
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Preference number: 1 (lower is better) Translates to: TCLSHTSVTNSLLLH*FPNAIGKPISFMSN Trigger: ATTAGACATGAATGAAATTGGTTTACCAATCGCGTTAGGAAAGCAGTGAAGCAGCAAACTGTTAGTAACAGAAGTATGAGAAAGGCACGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113116.3 |
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| 3UTR-3UTR TCA 90 bp | ACTAACAGTTTGCTGCTTCACTGCTTTCCTAACGCGATTGGTAAACCAATTTCAGGTGAGATTGAAAGGTaGGATGTGGACAGCATGAGG | + |
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Preference number: 2 (lower is better) Translates to: TNSLLLHCFPNAIGKPISGEIER*DVDSMR Trigger: CCTCATGCTGTCCACATCTCACCTTTCAATCTCACC...TGAAATTGGTTTACCAATCGCGTTAGGAAAGCAGTGAAGCAGCAAACTGTTAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113116.3 |
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| 3UTR-3UTR TCA 90 bp | TTTCTCATACTTCTGTTACTAACAGTTTGCTGCTTCACTGCTTTCCTAACGCGAGAGATGTGGACAGCATaGGGTTTATACATGGCTGTA | + |
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Preference number: 2 (lower is better) Translates to: FLILLLLTVCCFTAFLTREMWTA*GLYMAV Trigger: TACAGCCATGTATAAACCTCATGCTGTCCACATCTC...TCGCGTTAGGAAAGCAGTGAAGCAGCAAACTGTTAGTAACAGAAGTATGAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113116.3 |
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| 3UTR-3UTR TCA 90 bp | CATACTTCTGTTACTAACAGTTTGCTGCTTCACTGCTTTCCTAACGCGATTGGTGGTATCATACATAAGTaGACACATACAGCATACACA | + |
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Preference number: 2 (lower is better) Translates to: HTSVTNSLLLHCFPNAIGGIIHK*THTAYT Trigger: TGTGTATGCTGTATGTGTTCACTTATGTATGATACC...ACCAATCGCGTTAGGAAAGCAGTGAAGCAGCAAACTGTTAGTAACAGAAGTATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113116.3 |
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| 3UTR-3UTR TCA 90 bp | TGCTGCTTCACTGCTTTCCTAACGCGATTGGTAAACCAATTTCATTCATGTCTAGATAGCAAATATTTGTaGAAACAGAAAGCAGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: CCFTAFLTRLVNQFHSCLDSKYL*KQKAVG Trigger: TCCCACTGCTTTCTGTTTTCACAAATATTTGCTATC...TAGACATGAATGAAATTGGTTTACCAATCGCGTTAGGAAAGCAGTGAAGCAGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113116.3 |
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| 3UTR-3UTR CAA 90 bp | CTGTTACTAACAGTTTGCTGCTTCACTGCTTTCCTAACGCGATTGGTAAACCAAGTCAGTGAGGTGAGATaGAAAGGTGAGATGTGGACA | + |
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Preference number: 3 (lower is better) Translates to: LLLTVCCFTAFLTRLVNQVSEVR*KGEMWT Trigger: TGTCCACATCTCACCTTTCAATCTCACCTCACTGAC...TTGGTTTACCAATCGCGTTAGGAAAGCAGTGAAGCAGCAAACTGTTAGTAACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113116.3 |
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| 3UTR TCA 72 bp | AGTGAGGTGAGATTGAAAGGTGAGATGTGGACAGCATaGGGTTTATACATGGCTGTAGCCGAAACTGAGTTA | + |
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Preference number: 3 (lower is better) Translates to: SEVRLKGEMWTA*GLYMAVAETEL Trigger: TAACTCAGTTTCGGCTACAGCCATGTATAAACCTCATGCTGTCCACATCTCACCTTTCAATCTCACCTCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113116.3 |
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| 3UTR TCA 72 bp | TTCCTCTGGCTAAGAAATCCAAAGGCAGGTGACAGTTaGCGTGCCTTTCTCATACTTCTGTTACTAACAGTT | + |
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Preference number: 3 (lower is better) Translates to: FLWLRNPKAGDS*RAFLILLLLTV Trigger: AACTGTTAGTAACAGAAGTATGAGAAAGGCACGTCAACTGTCACCTGCCTTTGGATTTCTTAGCCAGAGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113116.3 |
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| 3UTR GCA 72 bp | CGTGCCTTTCTCATACTTCTGTTACTAACAGTTTGCTaGTTCACTGCTTTCCTAACGCGATTGGTAAACCAA | + |
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Preference number: 3 (lower is better) Translates to: RAFLILLLLTVC*FTAFLTRLVNQ Trigger: TTGGTTTACCAATCGCGTTAGGAAAGCAGTGAAGCAGCAAACTGTTAGTAACAGAAGTATGAGAAAGGCACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113116.3 |
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| CDS-3UTR CCA 90 bp | CATACTTCTGTTACTAACAGTTTGCTGCTTCACTGCTTTCCTAACGCGATTGGTGGATGGTCCCGAGAATaGGTACGGTTAGAATGCAGA | + |
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Preference number: 4 (lower is better) Translates to: HTSVTNSLLLHCFPNAIGGWSRE*VRLECR Trigger: TCTGCATTCTAACCGTACCCATTCTCGGGACCATCC...ACCAATCGCGTTAGGAAAGCAGTGAAGCAGCAAACTGTTAGTAACAGAAGTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113116.3 |
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| CDS-3UTR TCA 90 bp | ACTAACAGTTTGCTGCTTCACTGCTTTCCTAACGCGATTGGTAAACCAATTTCAGAAGCAACCTCTGTCTaGAATTGCCTTCCAGTCGCT | + |
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Preference number: 4 (lower is better) Translates to: TNSLLLHCFPNAIGKPISEATSV*NCLPVA Trigger: AGCGACTGGAAGGCAATTTCAGACAGAGGTTGCTTC...TGAAATTGGTTTACCAATCGCGTTAGGAAAGCAGTGAAGCAGCAAACTGTTAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113116.3 |
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| CDS-3UTR CCA 90 bp | CTGTTACTAACAGTTTGCTGCTTCACTGCTTTCCTAACGCGATTGGTAAACCAATTGCCTCACTGCCCTTaGGCTTTCCTTCTTTTTCAT | + |
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Preference number: 4 (lower is better) Translates to: LLLTVCCFTAFLTRLVNQLPHCP*AFLLFH Trigger: ATGAAAAAGAAGGAAAGCCCAAGGGCAGTGAGGCAA...TTGGTTTACCAATCGCGTTAGGAAAGCAGTGAAGCAGCAAACTGTTAGTAACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113116.3 |
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| 3UTR CAA 72 bp | TTGACGTGCCTTTCTCATACTTCTGTTACTAACAGTTaGCTGCTTCACTGCTTTCCTAACGCGATTGGTAAA | + |
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Preference number: 4 (lower is better) Translates to: LTCLSHTSVTNS*LLHCFPNAIGK Trigger: TTTACCAATCGCGTTAGGAAAGCAGTGAAGCAGCAAACTGTTAGTAACAGAAGTATGAGAAAGGCACGTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113116.3 |
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| CDS-3UTR TCA 90 bp | ACTAACAGTTTGCTGCTTCACTGCTTTCCTAACGCGATTGGTAAACCAATTTCAAATTCTTCAAGAGACTaGAGCAACCTCTGTCTGAAA | + |
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Preference number: 4 (lower is better) Translates to: TNSLLLHCFPNAIGKPISNSSRD*SNLCLK Trigger: TTTCAGACAGAGGTTGCTTCAGTCTCTTGAAGAATT...TGAAATTGGTTTACCAATCGCGTTAGGAAAGCAGTGAAGCAGCAAACTGTTAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113116.3 |
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| 3UTR CAA 72 bp | CTAACAGTTTGCTGCTTCACTGCTTTCCTAACGCGATaGGTAAACCAATTTCATTCATGTCTAATTGTTTTC | + |
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Preference number: 4 (lower is better) Translates to: LTVCCFTAFLTR*VNQFHSCLIVF Trigger: GAAAACAATTAGACATGAATGAAATTGGTTTACCAATCGCGTTAGGAAAGCAGTGAAGCAGCAAACTGTTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113116.3 |
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| CDS GCA 90 bp | TCGCTGGCCTTCAAGTGCTCCGCAGGGTTGTTCATCCTCCCTCTTTaGCTCACTGCCCTTGGGCTTTCCTTCTTTTTCATTGCAGGACTT | + |
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Preference number: 5 (lower is better) Translates to: SLAFKCSAGLFILPL*LTALGLSFFFIAGL Trigger: AAGTCCTGCAATGAAAAAGAAGGAAAGCCCAAGGGCAGTGAGGCAAAGAGGGAGGATGAACAACCCTGCGGAGCACTTGAAGGCCAGCGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113116.3 ENSMUST00000126811.8 |
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| CDS-3UTR CAA 90 bp | ACTAACAGTTTGCTGCTTCACTGCTTTCCTAACGCGATTGGTAAACCAATTTCAGTTCATCCTCCCTCTTaGCCTCACTGCCCTTGGGCT | + |
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Preference number: 5 (lower is better) Translates to: TNSLLLHCFPNAIGKPISVHPPS*PHCPWA Trigger: AGCCCAAGGGCAGTGAGGCAAAGAGGGAGGATGAAC...TGAAATTGGTTTACCAATCGCGTTAGGAAAGCAGTGAAGCAGCAAACTGTTAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113116.3 |
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| CDS-3UTR CAA 90 bp | GGTATGAATATATTCATTTTGTGGACAGTAAGAAAGAGAATCCAGATCACACAGTTTGCCTCACTGCCCTaGGGCTTTCCTTCTTTTTCA | + |
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Preference number: 5 (lower is better) Translates to: GMNIFILWTVRKRIQITQFASLP*GFPSFS Trigger: TGAAAAAGAAGGAAAGCCCAAGGGCAGTGAGGCAAA...CTGTGTGATCTGGATTCTCTTTCTTACTGTCCACAAAATGAATATATTCATACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113116.3 |
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| CDS CAA 72 bp | GCCTTCCAGTCGCTGGCCTTCAAGTGCTCCGCAGGGTaGTTCATCCTCCCTCTTTGCCTCACTGCCCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: AFQSLAFKCSAG*FILPLCLTALG Trigger: CCCAAGGGCAGTGAGGCAAAGAGGGAGGATGAACAACCCTGCGGAGCACTTGAAGGCCAGCGACTGGAAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113116.3 ENSMUST00000126811.8 |
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| CDS GCA 72 bp | CTGTCTGAAATTGCCTTCCAGTCGCTGGCCTTCAAGTaGTCCGCAGGGTTGTTCATCCTCCCTCTTTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: LSEIAFQSLAFK*SAGLFILPLCL Trigger: GAGGCAAAGAGGGAGGATGAACAACCCTGCGGAGCACTTGAAGGCCAGCGACTGGAAGGCAATTTCAGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113116.3 ENSMUST00000126811.8 |
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| CDS GCA 72 bp | TTCAAGTGCTCCGCAGGGTTGTTCATCCTCCCTCTTTaGCTCACTGCCCTTGGGCTTTCCTTCTTTTTCATT | + |
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Preference number: 6 (lower is better) Translates to: FKCSAGLFILPL*LTALGLSFFFI Trigger: AATGAAAAAGAAGGAAAGCCCAAGGGCAGTGAGGCAAAGAGGGAGGATGAACAACCCTGCGGAGCACTTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113116.3 ENSMUST00000126811.8 |
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