Pregenerated sensors for TCEAL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049536Ensembl transcript IDs: ENSMUST00000055104.6
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGACAGTGGAAACAGCAGGATCTAGGAGAAGGGGCAGCTGTACCTaGCAGGTAAGGCAAAGTACAGCAGAAGAGGACCAGCATGTGGTA | + |
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Preference number: 1 (lower is better) Translates to: GTVETAGSRRRGSCT*QVRQSTAEEDQHVV Trigger: TACCACATGCTGGTCCTCTTCTGCTGTACTTTGCCTTACCTGCCAGGTACAGCTGCCCCTTCTCCTAGATCCTGCTGTTTCCACTGTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| 3UTR TCA 90 bp | CACTACAGCTGTGGCTCCTTAGAGATTGCAAATGGCATTGAACCTTaGGCATATTGGCAGCATAGGGGACAGTGGAAACAGCAGGATCTA | + |
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Preference number: 1 (lower is better) Translates to: HYSCGSLEIANGIEP*AYWQHRGQWKQQDL Trigger: TAGATCCTGCTGTTTCCACTGTCCCCTATGCTGCCAATATGCTCAAGGTTCAATGCCATTTGCAATCTCTAAGGAGCCACAGCTGTAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| 3UTR CCA 90 bp | GGACTCCATCTTATGGTAACCCTCCTGCCTCAACTTCCCAAGAGTTaGGATTGCTGGCTTCATTTAGTACCACATAGACATTTCACTTTT | + |
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Preference number: 1 (lower is better) Translates to: GLHLMVTLLPQLPKS*DCWLHLVPHRHFTF Trigger: AAAAGTGAAATGTCTATGTGGTACTAAATGAAGCCAGCAATCCCAACTCTTGGGAAGTTGAGGCAGGAGGGTTACCATAAGATGGAGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| 3UTR CCA 90 bp | ATTTCTTCTAAGAGATTCAGAAGAGGGACTGGAGAGATGGCTCAGTaGTTACAAGCACTTGTTGCTCCTCTAGAGGACTTAGGTTCAATT | + |
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Preference number: 1 (lower is better) Translates to: ISSKRFRRGTGEMAQ*LQALVAPLEDLGSI Trigger: AATTGAACCTAAGTCCTCTAGAGGAGCAACAAGTGCTTGTAACCACTGAGCCATCTCTCCAGTCCCTCTTCTGAATCTCTTAGAAGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| 3UTR CCA 90 bp | CTTATGGTAACCCTCCTGCCTCAACTTCCCAAGAGTTGGGATTGCTaGCTTCATTTAGTACCACATAGACATTTCACTTTTATCTTCCTC | + |
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Preference number: 1 (lower is better) Translates to: LMVTLLPQLPKSWDC*LHLVPHRHFTFIFL Trigger: GAGGAAGATAAAAGTGAAATGTCTATGTGGTACTAAATGAAGCCAGCAATCCCAACTCTTGGGAAGTTGAGGCAGGAGGGTTACCATAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| 3UTR GCA 90 bp | CATCTTATGGTAACCCTCCTGCCTCAACTTCCCAAGAGTTGGGATTaGTGGCTTCATTTAGTACCACATAGACATTTCACTTTTATCTTC | + |
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Preference number: 1 (lower is better) Translates to: HLMVTLLPQLPKSWD*WLHLVPHRHFTFIF Trigger: GAAGATAAAAGTGAAATGTCTATGTGGTACTAAATGAAGCCAGCAATCCCAACTCTTGGGAAGTTGAGGCAGGAGGGTTACCATAAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| 3UTR TCA 90 bp | GCAGGTTTTCATGTATCATTTAATATTGCTTGTAATTCACAATTTTaGGACAGGGTCTCACTATGTAGCTCTGCCCAGAACTCACTGTAT | + |
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Preference number: 1 (lower is better) Translates to: AGFHVSFNIACNSQF*DRVSLCSSAQNSLY Trigger: ATACAGTGAGTTCTGGGCAGAGCTACATAGTGAGACCCTGTCTCAAAATTGTGAATTACAAGCAATATTAAATGATACATGAAAACCTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| 3UTR TCA 90 bp | CTTTTACTATATCAAAGTCTTAACAGCATTGTGCCTACACATACTTaGGTATGTTTAACTGTAAAGCTGGAAGAATCCTATTCTCCGTGT | + |
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Preference number: 1 (lower is better) Translates to: LLLYQSLNSIVPTHT*VCLTVKLEESYSPC Trigger: ACACGGAGAATAGGATTCTTCCAGCTTTACAGTTAAACATACTCAAGTATGTGTAGGCACAATGCTGTTAAGACTTTGATATAGTAAAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| 3UTR-3UTR CCA 90 bp | CCCAAGAGTTGGGATTGCTGGCTTCATTTAGTACCACATAGACATTTCACTTTTGAGGGACTGGAGAGATaGCTCAGTGGTTACAAGCAC | + |
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Preference number: 2 (lower is better) Translates to: PKSWDCWLHLVPHRHFTFEGLER*LSGYKH Trigger: GTGCTTGTAACCACTGAGCCATCTCTCCAGTCCCTC...AAAAGTGAAATGTCTATGTGGTACTAAATGAAGCCAGCAATCCCAACTCTTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| 3UTR-3UTR CCA 90 bp | GACAATTCTGTGAGAAGCCCCTTCTTCATACGTGGAAAGAGAGTTTCTACACAACAGCATAGGGGACAGTaGAAACAGCAGGATCTAGGA | + |
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Preference number: 2 (lower is better) Translates to: DNSVRSPFFIRGKRVSTQQHRGQ*KQQDLG Trigger: TCCTAGATCCTGCTGTTTCCACTGTCCCCTATGCTG...TTGTGTAGAAACTCTCTTTCCACGTATGAAGAAGGGGCTTCTCACAGAATTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| 3UTR-3UTR GCA 90 bp | AAGGCAAAGTACAGCAGAAGAGGACCAGCATGTGGTACCCACGTGGAATCTCACATGTATATCTTTCCATaGAAATGGATCACACTCAGA | + |
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Preference number: 2 (lower is better) Translates to: KAKYSRRGPACGTHVESHMYIFP*KWITLR Trigger: TCTGAGTGTGATCCATTTGCATGGAAAGATATACAT...GTGAGATTCCACGTGGGTACCACATGCTGGTCCTCTTCTGCTGTACTTTGCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| 3UTR-3UTR CCA 90 bp | CTAAGAGATTCAGAAGAGGGACTGGAGAGATGGCTCAGTGGTTACAAGCACTTGCTGTTACAACTAAGATaGGAAAGGGCATATAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: LRDSEEGLERWLSGYKHLLLQLR*ERAYKK Trigger: CTTCTTATATGCCCTTTCCCATCTTAGTTGTAACAG...CAAGTGCTTGTAACCACTGAGCCATCTCTCCAGTCCCTCTTCTGAATCTCTTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| 3UTR-3UTR CCA 90 bp | CAACTTCCCAAGAGTTGGGATTGCTGGCTTCATTTAGTACCACATAGACATTTCTCCATCTTAGAAATTTaGCTGCCTATCCCAGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: QLPKSWDCWLHLVPHRHFSILEI*LPIPGL Trigger: GAGACCTGGGATAGGCAGCCAAATTTCTAAGATGGA...GAAATGTCTATGTGGTACTAAATGAAGCCAGCAATCCCAACTCTTGGGAAGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| 3UTR-3UTR TCA 90 bp | GACAATTCTGTGAGAAGCCCCTTCTTCATACGTGGAAAGAGAGTTTCTACACAACACAGAAATTGTTGGTaGGCACAAGTGAGACATTCT | + |
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Preference number: 2 (lower is better) Translates to: DNSVRSPFFIRGKRVSTQHRNCW*AQVRHS Trigger: AGAATGTCTCACTTGTGCTCACCAACAATTTCTGTG...TTGTGTAGAAACTCTCTTTCCACGTATGAAGAAGGGGCTTCTCACAGAATTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| 3UTR-3UTR GCA 90 bp | CCCAAGAGTTGGGATTGCTGGCTTCATTTAGTACCACATAGACATTTCACTTTTACCACCATCTGTAACTaGTGTTCCAGAGCATCCAAT | + |
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Preference number: 2 (lower is better) Translates to: PKSWDCWLHLVPHRHFTFTTICN*CSRASN Trigger: ATTGGATGCTCTGGAACAGCAGTTACAGATGGTGGT...AAAAGTGAAATGTCTATGTGGTACTAAATGAAGCCAGCAATCCCAACTCTTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| 3UTR-3UTR CCA 90 bp | TGGGATTGCTGGCTTCATTTAGTACCACATAGACATTTCACTTTTATCTTCCTCATTCAGAAGAGGGACTaGAGAGATGGCTCAGTGGTT | + |
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Preference number: 2 (lower is better) Translates to: WDCWLHLVPHRHFTFIFLIQKRD*RDGSVV Trigger: AACCACTGAGCCATCTCTCCAGTCCCTCTTCTGAAT...GAGGAAGATAAAAGTGAAATGTCTATGTGGTACTAAATGAAGCCAGCAATCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| 3UTR-3UTR CCA 90 bp | CCCAAGAGTTGGGATTGCTGGCTTCATTTAGTACCACATAGACATTTCACTTTTCATGTGGTACCCACGTaGAATCTCACAGAAATTGTT | + |
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Preference number: 2 (lower is better) Translates to: PKSWDCWLHLVPHRHFTFHVVPT*NLTEIV Trigger: AACAATTTCTGTGAGATTCCACGTGGGTACCACATG...AAAAGTGAAATGTCTATGTGGTACTAAATGAAGCCAGCAATCCCAACTCTTGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| 3UTR-3UTR CCA 90 bp | AATTCTGTGAGAAGCCCCTTCTTCATACGTGGAAAGAGAGTTTCTACACAATTTCTAGCACTACAGCTGTaGCTCCTTAGAGATTGCAAA | + |
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Preference number: 2 (lower is better) Translates to: NSVRSPFFIRGKRVSTQFLALQL*LLRDCK Trigger: TTTGCAATCTCTAAGGAGCCACAGCTGTAGTGCTAG...AAATTGTGTAGAAACTCTCTTTCCACGTATGAAGAAGGGGCTTCTCACAGAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| 3UTR-3UTR TCA 90 bp | CAACTTCCCAAGAGTTGGGATTGCTGGCTTCATTTAGTACCACATAGACATTTCGTGCCTACACATACTTaGGTATGTTTAACTGTAAAG | + |
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Preference number: 2 (lower is better) Translates to: QLPKSWDCWLHLVPHRHFVPTHT*VCLTVK Trigger: CTTTACAGTTAAACATACTCAAGTATGTGTAGGCAC...GAAATGTCTATGTGGTACTAAATGAAGCCAGCAATCCCAACTCTTGGGAAGTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| 3UTR-3UTR GCA 90 bp | CCCAAGAGTTGGGATTGCTGGCTTCATTTAGTACCACATAGACATTTCACTTTTAAAAACAAAGACCCGTaGCAGTTACATGTCAAACAC | + |
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Preference number: 2 (lower is better) Translates to: PKSWDCWLHLVPHRHFTFKNKDP*QLHVKH Trigger: GTGTTTGACATGTAACTGGCACGGGTCTTTGTTTTT...AAAAGTGAAATGTCTATGTGGTACTAAATGAAGCCAGCAATCCCAACTCTTGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| 3UTR-3UTR GCA 90 bp | GACAATTCTGTGAGAAGCCCCTTCTTCATACGTGGAAAGAGAGTTTCTACACAACAACACTGTAAGGTATaGATGTCTTACTCCTATTTA | + |
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Preference number: 2 (lower is better) Translates to: DNSVRSPFFIRGKRVSTQQHCKV*MSYSYL Trigger: TAAATAGGAGTAAGACATGCATACCTTACAGTGTTG...TTGTGTAGAAACTCTCTTTCCACGTATGAAGAAGGGGCTTCTCACAGAATTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| 3UTR CCA 72 bp | GAAACAGCAGGATCTAGGAGAAGGGGCAGCTGTACCTaGCAGGTAAGGCAAAGTACAGCAGAAGAGGACCAG | + |
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Preference number: 3 (lower is better) Translates to: ETAGSRRRGSCT*QVRQSTAEEDQ Trigger: CTGGTCCTCTTCTGCTGTACTTTGCCTTACCTGCCAGGTACAGCTGCCCCTTCTCCTAGATCCTGCTGTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| 3UTR CCA 72 bp | TGTAGCTCTGCCCAGAACTCACTGTATAGCCCAGTCTaGACTCCATCTTATGGTAACCCTCCTGCCTCAACT | + |
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Preference number: 3 (lower is better) Translates to: CSSAQNSLYSPV*TPSYGNPPAST Trigger: AGTTGAGGCAGGAGGGTTACCATAAGATGGAGTCCAGACTGGGCTATACAGTGAGTTCTGGGCAGAGCTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| 3UTR TCA 72 bp | TGTGGCTCCTTAGAGATTGCAAATGGCATTGAACCTTaGGCATATTGGCAGCATAGGGGACAGTGGAAACAG | + |
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Preference number: 3 (lower is better) Translates to: CGSLEIANGIEP*AYWQHRGQWKQ Trigger: CTGTTTCCACTGTCCCCTATGCTGCCAATATGCTCAAGGTTCAATGCCATTTGCAATCTCTAAGGAGCCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| 3UTR GCA 72 bp | GACTGGAGAGATGGCTCAGTGGTTACAAGCACTTGTTaGTCCTCTAGAGGACTTAGGTTCAATTTTCACCAC | + |
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Preference number: 3 (lower is better) Translates to: DWRDGSVVTSTC*SSRGLRFNFHH Trigger: GTGGTGAAAATTGAACCTAAGTCCTCTAGAGGAGCAACAAGTGCTTGTAACCACTGAGCCATCTCTCCAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| 3UTR GCA 72 bp | GTAACCCTCCTGCCTCAACTTCCCAAGAGTTGGGATTaGTGGCTTCATTTAGTACCACATAGACATTTCACT | + |
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Preference number: 3 (lower is better) Translates to: VTLLPQLPKSWD*WLHLVPHRHFT Trigger: AGTGAAATGTCTATGTGGTACTAAATGAAGCCAGCAATCCCAACTCTTGGGAAGTTGAGGCAGGAGGGTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| 3UTR CCA 72 bp | CTTATGGTAACCCTCCTGCCTCAACTTCCCAAGAGTTaGGATTGCTGGCTTCATTTAGTACCACATAGACAT | + |
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Preference number: 3 (lower is better) Translates to: LMVTLLPQLPKS*DCWLHLVPHRH Trigger: ATGTCTATGTGGTACTAAATGAAGCCAGCAATCCCAACTCTTGGGAAGTTGAGGCAGGAGGGTTACCATAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| 3UTR CCA 72 bp | ACCCTCCTGCCTCAACTTCCCAAGAGTTGGGATTGCTaGCTTCATTTAGTACCACATAGACATTTCACTTTT | + |
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Preference number: 3 (lower is better) Translates to: TLLPQLPKSWDC*LHLVPHRHFTF Trigger: AAAAGTGAAATGTCTATGTGGTACTAAATGAAGCCAGCAATCCCAACTCTTGGGAAGTTGAGGCAGGAGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| 3UTR-3UTR CAA 90 bp | CCCAAGAGTTGGGATTGCTGGCTTCATTTAGTACCACATAGACATTTCACTTTTTTCCATCTTAGAAATTaGGCTGCCTATCCCAGGTCT | + |
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Preference number: 3 (lower is better) Translates to: PKSWDCWLHLVPHRHFTFFHLRN*AAYPRS Trigger: AGACCTGGGATAGGCAGCCAAATTTCTAAGATGGAA...AAAAGTGAAATGTCTATGTGGTACTAAATGAAGCCAGCAATCCCAACTCTTGGG 42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| 3UTR-3UTR CAA 90 bp | GACAATTCTGTGAGAAGCCCCTTCTTCATACGTGGAAAGAGAGTTTCTACACAAAAAGTCTTAACAGCATaGTGCCTACACATACTTGAG | + |
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Preference number: 3 (lower is better) Translates to: DNSVRSPFFIRGKRVSTQKVLTA*CLHILE Trigger: CTCAAGTATGTGTAGGCACAATGCTGTTAAGACTTT...TTGTGTAGAAACTCTCTTTCCACGTATGAAGAAGGGGCTTCTCACAGAATTGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| 3UTR CCA 72 bp | ATAAGACAATTCTGTGAGAAGCCCCTTCTTCATACGTaGAAAGAGAGTTTCTACACAATTTGTAAGATGGAC | + |
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Preference number: 3 (lower is better) Translates to: IRQFCEKPLLHT*KESFYTICKMD Trigger: GTCCATCTTACAAATTGTGTAGAAACTCTCTTTCCACGTATGAAGAAGGGGCTTCTCACAGAATTGTCTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| 3UTR-3UTR CAA 90 bp | TGGGATTGCTGGCTTCATTTAGTACCACATAGACATTTCACTTTTATCTTCCTCTCAGTGACCTCATGTTaGAATTCAGGAAGAATTGAA | + |
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Preference number: 3 (lower is better) Translates to: WDCWLHLVPHRHFTFIFLSVTSC*NSGRIE Trigger: TTCAATTCTTCCTGAATTCAAACATGAGGTCACTGA...GAGGAAGATAAAAGTGAAATGTCTATGTGGTACTAAATGAAGCCAGCAATCCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| CDS-3UTR CCA 90 bp | AAGGCAAAGTACAGCAGAAGAGGACCAGCATGTGGTACCCACGTGGAATCTCACATACGGTCTTCGAACTaGTTCTTCTGTGAGAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: KAKYSRRGPACGTHVESHIRSSN*FFCERH Trigger: GTGCCTCTCACAGAAGAACCAGTTCGAAGACCGTAT...GTGAGATTCCACGTGGGTACCACATGCTGGTCCTCTTCTGCTGTACTTTGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| CDS-3UTR GCA 90 bp | GACAATTCTGTGAGAAGCCCCTTCTTCATACGTGGAAAGAGAGTTTCTACACAACCTCTAGCTTGTGTTTaGCCACCCCGCAGGGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: DNSVRSPFFIRGKRVSTQPLACV*PPRREV Trigger: AACCTCCCTGCGGGGTGGGCAAACACAAGCTAGAGG...TTGTGTAGAAACTCTCTTTCCACGTATGAAGAAGGGGCTTCTCACAGAATTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| CDS-3UTR CCA 90 bp | CCCGCTTCTATTTCTTCTAAGAGATTCAGAAGAGGGACTGGAGAGATGGCTCAGAGGGAGGTTGCTCCATaGGAATACGGTCTTCGAACT | + |
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Preference number: 4 (lower is better) Translates to: PASISSKRFRRGTGEMAQREVAP*EYGLRT Trigger: AGTTCGAAGACCGTATTCCCATGGAGCAACCTCCCT...CTGAGCCATCTCTCCAGTCCCTCTTCTGAATCTCTTAGAAGAAATAGAAGCGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| CDS-3UTR TCA 90 bp | CAACTTCCCAAGAGTTGGGATTGCTGGCTTCATTTAGTACCACATAGACATTTCGGGCCAGTCTTTCTTTaGAGCTTCCCTCCTCTAGCT | + |
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Preference number: 4 (lower is better) Translates to: QLPKSWDCWLHLVPHRHFGPVFL*SFPPLA Trigger: AGCTAGAGGAGGGAAGCTTCAAAGAAAGACTGGCCC...GAAATGTCTATGTGGTACTAAATGAAGCCAGCAATCCCAACTCTTGGGAAGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| CDS-3UTR GCA 90 bp | GAGCTCAAAGCACCCTTTTCTCGTTTACTTTCACAGCAACACTGTAAGGTATGCAGAGTGCTCTCTGGTTaGTCTTCATTTTCACTGCGC | + |
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Preference number: 4 (lower is better) Translates to: ELKAPFSRLLSQQHCKVCRVLSG*SSFSLR Trigger: GCGCAGTGAAAATGAAGAGCAACCAGAGAGCACTCT...GCATACCTTACAGTGTTGCTGTGAAAGTAAACGAGAAAAGGGTGCTTTGAGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| CDS-3UTR GCA 90 bp | AATTCTGTGAGAAGCCCCTTCTTCATACGTGGAAAGAGAGTTTCTACACAATTTAGGAGACTGCTCCACTaGAGGCTGCTCTTCATCGAT | + |
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Preference number: 4 (lower is better) Translates to: NSVRSPFFIRGKRVSTQFRRLLH*RLLFID Trigger: ATCGATGAAGAGCAGCCTGCAGTGGAGCAGTCTCCT...AAATTGTGTAGAAACTCTCTTTCCACGTATGAAGAAGGGGCTTCTCACAGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| CDS-3UTR GCA 90 bp | CCCAAGAGTTGGGATTGCTGGCTTCATTTAGTACCACATAGACATTTCACTTTTAGGGCGGCTCCGTTTTaGCTTCCAATGCATTATCAT | + |
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Preference number: 4 (lower is better) Translates to: PKSWDCWLHLVPHRHFTFRAAPF*LPMHYH Trigger: ATGATAATGCATTGGAAGGCAAAACGGAGCCGCCCT...AAAAGTGAAATGTCTATGTGGTACTAAATGAAGCCAGCAATCCCAACTCTTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| CDS-3UTR CCA 90 bp | AATTCTGTGAGAAGCCCCTTCTTCATACGTGGAAAGAGAGTTTCTACACAATTTCTTCAGAGTGCTCTCTaGTTGCTCTTCATTTTCACT | + |
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Preference number: 4 (lower is better) Translates to: NSVRSPFFIRGKRVSTQFLQSAL*LLFIFT Trigger: AGTGAAAATGAAGAGCAACCAGAGAGCACTCTGAAG...AAATTGTGTAGAAACTCTCTTTCCACGTATGAAGAAGGGGCTTCTCACAGAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| CDS-3UTR GCA 90 bp | GATAATAAACGTCCCGCTTCTATTTCTTCTAAGAGATTCAGAAGAGGGACTGGACGTTTTGCCTTCCAATaGATTATCATCAGTTTGTTT | + |
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Preference number: 4 (lower is better) Translates to: DNKRPASISSKRFRRGTGRFAFQ*IIISLF Trigger: AAACAAACTGATGATAATGCATTGGAAGGCAAAACG...TCCAGTCCCTCTTCTGAATCTCTTAGAAGAAATAGAAGCGGGACGTTTATTATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| CDS CCA 90 bp | CCCACCCCGCAGGGAGGTTGCTCCATGGGAATACGGTCTTCGAACTaGTTCTTCTGTGAGAGGCACTCCTGCGGAGGACGATCTTCAGAC | + |
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Preference number: 5 (lower is better) Translates to: PTPQGGCSMGIRSSN*FFCERHSCGGRSSD Trigger: GTCTGAAGATCGTCCTCCGCAGGAGTGCCTCTCACAGAAGAACCAGTTCGAAGACCGTATTCCCATGGAGCAACCTCCCTGCGGGGTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| CDS TCA 90 bp | GGGAGGTTGCTCCATGGGAATACGGTCTTCGAACTGGTTCTTCTGTaGGAGGCACTCCTGCGGAGGACGATCTTCAGACAGCAGCATCTC | + |
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Preference number: 5 (lower is better) Translates to: GRLLHGNTVFELVLL*EALLRRTIFRQQHL Trigger: GAGATGCTGCTGTCTGAAGATCGTCCTCCGCAGGAGTGCCTCTCACAGAAGAACCAGTTCGAAGACCGTATTCCCATGGAGCAACCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| CDS GCA 90 bp | ATGGGAATACGGTCTTCGAACTGGTTCTTCTGTGAGAGGCACTCCTaGGGAGGACGATCTTCAGACAGCAGCATCTCTGGGAGCAGCTCG | + |
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Preference number: 5 (lower is better) Translates to: MGIRSSNWFFCERHS*GGRSSDSSISGSSS Trigger: CGAGCTGCTCCCAGAGATGCTGCTGTCTGAAGATCGTCCTCCGCAGGAGTGCCTCTCACAGAAGAACCAGTTCGAAGACCGTATTCCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| CDS-3UTR CAA 90 bp | CCCAAGAGTTGGGATTGCTGGCTTCATTTAGTACCACATAGACATTTCACTTTTCTTCCCTCCTCTAGCTaGTGTTTGCCCACCCCGCAG | + |
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Preference number: 5 (lower is better) Translates to: PKSWDCWLHLVPHRHFTFLPSSS*CLPTPQ Trigger: CTGCGGGGTGGGCAAACACAAGCTAGAGGAGGGAAG...AAAAGTGAAATGTCTATGTGGTACTAAATGAAGCCAGCAATCCCAACTCTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| CDS-3UTR CAA 90 bp | GACAATTCTGTGAGAAGCCCCTTCTTCATACGTGGAAAGAGAGTTTCTACACAACGGGCCAGTCTTTCTTaGAAGCTTCCCTCCTCTAGC | + |
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Preference number: 5 (lower is better) Translates to: DNSVRSPFFIRGKRVSTQRASLS*KLPSSS Trigger: GCTAGAGGAGGGAAGCTTCAAAGAAAGACTGGCCCG...TTGTGTAGAAACTCTCTTTCCACGTATGAAGAAGGGGCTTCTCACAGAATTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| CDS-3UTR CAA 90 bp | GACAATTCTGTGAGAAGCCCCTTCTTCATACGTGGAAAGAGAGTTTCTACACAACAGAGTGCTCTCTGGTaGCTCTTCATTTTCACTGCG | + |
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Preference number: 5 (lower is better) Translates to: DNSVRSPFFIRGKRVSTQQSALW*LFIFTA Trigger: CGCAGTGAAAATGAAGAGCAACCAGAGAGCACTCTG...TTGTGTAGAAACTCTCTTTCCACGTATGAAGAAGGGGCTTCTCACAGAATTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| CDS-3UTR CAA 90 bp | CCCAAGAGTTGGGATTGCTGGCTTCATTTAGTACCACATAGACATTTCACTTTTAATGTCTCCTATGAATaGAGGGCGGATACGGGCCAG | + |
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Preference number: 5 (lower is better) Translates to: PKSWDCWLHLVPHRHFTFNVSYE*RADTGQ Trigger: CTGGCCCGTATCCGCCCTCAATTCATAGGAGACATT...AAAAGTGAAATGTCTATGTGGTACTAAATGAAGCCAGCAATCCCAACTCTTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| CDS-3UTR CAA 90 bp | CATATAAGAAGATGCAAACACAAGGGCCAGGTAGCAAATGCTATTAACAAGCAATGCATTATCATCAGTTaGTTTCGTACTCTCTTCATC | + |
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Preference number: 5 (lower is better) Translates to: HIRRCKHKGQVANAINKQCIIIS*FRTLFI Trigger: GATGAAGAGAGTACGAAACAAACTGATGATAATGCA...TTGCTTGTTAATAGCATTTGCTACCTGGCCCTTGTGTTTGCATCTTCTTATATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| CDS CAA 90 bp | GGGCGGATACGGGCCAGTCTTTCTTTGAAGCTTCCCTCCTCTAGCTaGTGTTTGCCCACCCCGCAGGGAGGTTGCTCCATGGGAATACGG | + |
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Preference number: 6 (lower is better) Translates to: GRIRASLSLKLPSSS*CLPTPQGGCSMGIR Trigger: CCGTATTCCCATGGAGCAACCTCCCTGCGGGGTGGGCAAACACAAGCTAGAGGAGGGAAGCTTCAAAGAAAGACTGGCCCGTATCCGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| CDS CCA 72 bp | CTCCTGCGGAGGACGATCTTCAGACAGCAGCATCTCTaGGAGCAGCTCGGGCAGGAGCTCTTCAGGAAAGAA | + |
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Preference number: 6 (lower is better) Translates to: LLRRTIFRQQHL*EQLGQELFRKE Trigger: TTCTTTCCTGAAGAGCTCCTGCCCGAGCTGCTCCCAGAGATGCTGCTGTCTGAAGATCGTCCTCCGCAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| CDS CAA 72 bp | CGGGCCAGTCTTTCTTTGAAGCTTCCCTCCTCTAGCTaGTGTTTGCCCACCCCGCAGGGAGGTTGCTCCATG | + |
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Preference number: 6 (lower is better) Translates to: RASLSLKLPSSS*CLPTPQGGCSM Trigger: CATGGAGCAACCTCCCTGCGGGGTGGGCAAACACAAGCTAGAGGAGGGAAGCTTCAAAGAAAGACTGGCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| CDS GCA 72 bp | CGGTCTTCGAACTGGTTCTTCTGTGAGAGGCACTCCTaGGGAGGACGATCTTCAGACAGCAGCATCTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: RSSNWFFCERHS*GGRSSDSSISG Trigger: CCCAGAGATGCTGCTGTCTGAAGATCGTCCTCCGCAGGAGTGCCTCTCACAGAAGAACCAGTTCGAAGACCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| CDS CCA 72 bp | CAGGGAGGTTGCTCCATGGGAATACGGTCTTCGAACTaGTTCTTCTGTGAGAGGCACTCCTGCGGAGGACGA | + |
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Preference number: 6 (lower is better) Translates to: QGGCSMGIRSSN*FFCERHSCGGR Trigger: TCGTCCTCCGCAGGAGTGCCTCTCACAGAAGAACCAGTTCGAAGACCGTATTCCCATGGAGCAACCTCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| CDS CAA 90 bp | ATACGGGCCAGTCTTTCTTTGAAGCTTCCCTCCTCTAGCTTGTGTTaGCCCACCCCGCAGGGAGGTTGCTCCATGGGAATACGGTCTTCG | + |
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Preference number: 6 (lower is better) Translates to: IRASLSLKLPSSSLC*PTPQGGCSMGIRSS Trigger: CGAAGACCGTATTCCCATGGAGCAACCTCCCTGCGGGGTGGGCAAACACAAGCTAGAGGAGGGAAGCTTCAAAGAAAGACTGGCCCGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| CDS GCA 72 bp | TCCTCTAGCTTGTGTTTGCCCACCCCGCAGGGAGGTTaGTCCATGGGAATACGGTCTTCGAACTGGTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SSSLCLPTPQGG*SMGIRSSNWFF Trigger: GAAGAACCAGTTCGAAGACCGTATTCCCATGGAGCAACCTCCCTGCGGGGTGGGCAAACACAAGCTAGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| CDS CCA 72 bp | GCTTGTGTTTGCCCACCCCGCAGGGAGGTTGCTCCATaGGAATACGGTCTTCGAACTGGTTCTTCTGTGAGA | + |
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Preference number: 6 (lower is better) Translates to: ACVCPPRREVAP*EYGLRTGSSVR Trigger: TCTCACAGAAGAACCAGTTCGAAGACCGTATTCCCATGGAGCAACCTCCCTGCGGGGTGGGCAAACACAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| CDS GCA 72 bp | GCTCCACTGCAGGCTGCTCTTCATCGATCTTCAGAGTaGTCTCTGGTTGCTCTTCATTTTCACTGCGCGTGT | + |
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Preference number: 6 (lower is better) Translates to: APLQAALHRSSE*SLVALHFHCAC Trigger: ACACGCGCAGTGAAAATGAAGAGCAACCAGAGAGCACTCTGAAGATCGATGAAGAGCAGCCTGCAGTGGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| CDS GCA 72 bp | CTCCTCAGAGCACTGATTTTCAGGAGACTGCTCCACTaGAGGCTGCTCTTCATCGATCTTCAGAGTGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: LLRALIFRRLLH*RLLFIDLQSAL Trigger: GAGAGCACTCTGAAGATCGATGAAGAGCAGCCTGCAGTGGAGCAGTCTCCTGAAAATCAGTGCTCTGAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| CDS CAA 72 bp | AGTCTTTCTTTGAAGCTTCCCTCCTCTAGCTTGTGTTaGCCCACCCCGCAGGGAGGTTGCTCCATGGGAATA | + |
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Preference number: 6 (lower is better) Translates to: SLSLKLPSSSLC*PTPQGGCSMGI Trigger: TATTCCCATGGAGCAACCTCCCTGCGGGGTGGGCAAACACAAGCTAGAGGAGGGAAGCTTCAAAGAAAGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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| CDS CCA 72 bp | TGCAGGCTGCTCTTCATCGATCTTCAGAGTGCTCTCTaGTTGCTCTTCATTTTCACTGCGCGTGTTTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: CRLLFIDLQSAL*LLFIFTARVFH Trigger: ATGGAAAACACGCGCAGTGAAAATGAAGAGCAACCAGAGAGCACTCTGAAGATCGATGAAGAGCAGCCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055104.6 |
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