Pregenerated sensors for TCEA3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001604Ensembl transcript IDs: ENSMUST00000102533.11, ENSMUST00000143942.2
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TATTTATTTATTTTTGCTCTGGGTCACGTGGTCTGTGCTTCCTGCTaGGTCTTCTTCACCTTATCCTCTGCCATCCTTGTGGGTGGTTCC | + |
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Preference number: 1 (lower is better) Translates to: YLFIFALGHVVCASC*VFFTLSSAILVGGS Trigger: GGAACCACCCACAAGGATGGCAGAGGATAAGGTGAAGAAGACCCAGCAGGAAGCACAGACCACGTGACCCAGAGCAAAAATAAATAAATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS-3UTR TCA 90 bp | GGGTCACGTGGTCTGTGCTTCCTGCTGGGTCTTCTTCACCTTATCCTCTGCCATGGACAGAGTCCCCGGTaGGGTAGCAGGGGGCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: GSRGLCFLLGLLHLILCHGQSPR*GSRGPG Trigger: TCCTGGCCCCCTGCTACCTCACCGGGGACTCTGTCC...ATGGCAGAGGATAAGGTGAAGAAGACCCAGCAGGAAGCACAGACCACGTGACCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS-3UTR TCA 90 bp | GGTCTGTGCTTCCTGCTGGGTCTTCTTCACCTTATCCTCTGCCATCCTTGTGGGGGCAAAGGTGGGAGTTaGGGGGCTGCTGGGGGTCGT | + |
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Preference number: 4 (lower is better) Translates to: GLCFLLGLLHLILCHPCGGKGGS*GAAGGR Trigger: ACGACCCCCAGCAGCCCCTCAACTCCCACCTTTGCC...CCCACAAGGATGGCAGAGGATAAGGTGAAGAAGACCCAGCAGGAAGCACAGACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS-3UTR TCA 90 bp | GGTCTGTGCTTCCTGCTGGGTCTTCTTCACCTTATCCTCTGCCATCCTTGTGGGGGTCCTTCAGGTTGCTaGTGCGGCTGCGCACACGGT | + |
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Preference number: 4 (lower is better) Translates to: GLCFLLGLLHLILCHPCGGPSGC*CGCAHG Trigger: ACCGTGTGCGCAGCCGCATCAGCAACCTGAAGGACC...CCCACAAGGATGGCAGAGGATAAGGTGAAGAAGACCCAGCAGGAAGCACAGACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS-3UTR CCA 90 bp | TCTGGGTCACGTGGTCTGTGCTTCCTGCTGGGTCTTCTTCACCTTATCCTCTGCATTCCGCCTCAGGCCTaGGTTCCTGGGGTCCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: SGSRGLCFLLGLLHLILCIPPQA*VPGVLQ Trigger: CTGAAGGACCCCAGGAACCCAGGCCTGAGGCGGAAT...GCAGAGGATAAGGTGAAGAAGACCCAGCAGGAAGCACAGACCACGTGACCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS-3UTR GCA 90 bp | GGGTCACGTGGTCTGTGCTTCCTGCTGGGTCTTCTTCACCTTATCCTCTGCCATAGAGGTCAGTGGTGGTaGCGCCTGTCTTCGCCATCT | + |
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Preference number: 4 (lower is better) Translates to: GSRGLCFLLGLLHLILCHRGQWW*RLSSPS Trigger: AGATGGCGAAGACAGGCGGCACCACCACTGACCTCT...ATGGCAGAGGATAAGGTGAAGAAGACCCAGCAGGAAGCACAGACCACGTGACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS-3UTR CCA 90 bp | TCTGGGTCACGTGGTCTGTGCTTCCTGCTGGGTCTTCTTCACCTTATCCTCTGCCCTGTCTTCGCCATCTaGTGCTCACGGATGGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: SGSRGLCFLLGLLHLILCPVFAI*CSRMAS Trigger: AGAGGCCATCCGTGAGCACCAGATGGCGAAGACAGG...GCAGAGGATAAGGTGAAGAAGACCCAGCAGGAAGCACAGACCACGTGACCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS-3UTR CCA 90 bp | GTCTGTGCTTCCTGCTGGGTCTTCTTCACCTTATCCTCTGCCATCCTTGTGGGTGCAAGAGGTCAGTGGTaGTGCCGCCTGTCTTCGCCA | + |
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Preference number: 4 (lower is better) Translates to: VCASCWVFFTLSSAILVGARGQW*CRLSSP Trigger: TGGCGAAGACAGGCGGCACCACCACTGACCTCTTGC...ACCCACAAGGATGGCAGAGGATAAGGTGAAGAAGACCCAGCAGGAAGCACAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS-3UTR TCA 90 bp | CACGTGGTCTGTGCTTCCTGCTGGGTCTTCTTCACCTTATCCTCTGCCATCCTTCACCACTTCCTTGTCTaGGCAGTGCTTGCGGACTCC | + |
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Preference number: 4 (lower is better) Translates to: HVVCASCWVFFTLSSAILHHFLV*AVLADS Trigger: GGAGTCCGCAAGCACTGCTCAGACAAGGAAGTGGTG...AAGGATGGCAGAGGATAAGGTGAAGAAGACCCAGCAGGAAGCACAGACCACGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS-3UTR TCA 90 bp | CTGTGCTTCCTGCTGGGTCTTCTTCACCTTATCCTCTGCCATCCTTGTGGGTGGAGAGGAGGTGGTGGATaGCCTGGAGTCTACAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: LCFLLGLLHLILCHPCGWRGGGG*PGVYRV Trigger: GACTCTGTAGACTCCAGGTCATCCACCACCTCCTCT...CCACCCACAAGGATGGCAGAGGATAAGGTGAAGAAGACCCAGCAGGAAGCACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS-3UTR CCA 90 bp | CTGTGCTTCCTGCTGGGTCTTCTTCACCTTATCCTCTGCCATCCTTGTGGGTGGCTTGGCAATGAGCTCTaGGGAAATGGCCCCACTGAG | + |
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Preference number: 4 (lower is better) Translates to: LCFLLGLLHLILCHPCGWLGNEL*GNGPTE Trigger: CTCAGTGGGGCCATTTCCCCAGAGCTCATTGCCAAG...CCACCCACAAGGATGGCAGAGGATAAGGTGAAGAAGACCCAGCAGGAAGCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS-3UTR TCA 90 bp | GTCTGTGCTTCCTGCTGGGTCTTCTTCACCTTATCCTCTGCCATCCTTGTGGGTCTGTCATCTTGGCAATaGGCTCTGGGGAAATGGCCC | + |
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Preference number: 4 (lower is better) Translates to: VCASCWVFFTLSSAILVGLSSWQ*ALGKWP Trigger: GGGCCATTTCCCCAGAGCTCATTGCCAAGATGACAG...ACCCACAAGGATGGCAGAGGATAAGGTGAAGAAGACCCAGCAGGAAGCACAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS-3UTR GCA 90 bp | GGGTCACGTGGTCTGTGCTTCCTGCTGGGTCTTCTTCACCTTATCCTCTGCCATTCCTTGTCTGAGCAGTaGTTGCGGACTCCGTTGACT | + |
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Preference number: 4 (lower is better) Translates to: GSRGLCFLLGLLHLILCHSLSEQ*LRTPLT Trigger: AGTCAACGGAGTCCGCAAGCACTGCTCAGACAAGGA...ATGGCAGAGGATAAGGTGAAGAAGACCCAGCAGGAAGCACAGACCACGTGACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS-3UTR GCA 90 bp | TATTTTTGCTCTGGGTCACGTGGTCTGTGCTTCCTGCTGGGTCTTCTTCACCTTTGGGAGTTGAGGGGCTaGTGGGGGTCGTGGGAGTTT | + |
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Preference number: 4 (lower is better) Translates to: YFCSGSRGLCFLLGLLHLWELRG*WGSWEF Trigger: AAACTCCCACGACCCCCAGCAGCCCCTCAACTCCCA...AAGGTGAAGAAGACCCAGCAGGAAGCACAGACCACGTGACCCAGAGCAAAAATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS-3UTR CCA 90 bp | TCTGTGCTTCCTGCTGGGTCTTCTTCACCTTATCCTCTGCCATCCTTGTGGGTGCTCTTTCTCCTTTGGTaGTTCTGGGGGAGTCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: SVLPAGSSSPYPLPSLWVLFLLW*FWGSPA Trigger: TGCTGGACTCCCCCAGAACCACCAAAGGAGAAAGAG...CACCCACAAGGATGGCAGAGGATAAGGTGAAGAAGACCCAGCAGGAAGCACAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS-3UTR CCA 90 bp | ATTTATTTTTGCTCTGGGTCACGTGGTCTGTGCTTCCTGCTGGGTCTTCTTCACACCGCAAGAGGTCAGTaGTGGTGCCGCCTGTCTTCG | + |
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Preference number: 4 (lower is better) Translates to: IYFCSGSRGLCFLLGLLHTARGQ*WCRLSS Trigger: CGAAGACAGGCGGCACCACCACTGACCTCTTGCGGT...GTGAAGAAGACCCAGCAGGAAGCACAGACCACGTGACCCAGAGCAAAAATAAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS-3UTR TCA 90 bp | GTCTGTGCTTCCTGCTGGGTCTTCTTCACCTTATCCTCTGCCATCCTTGTGGGTTGCCTTCAGAGCTGCTaGCAGCATCTCCACACATTT | + |
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Preference number: 4 (lower is better) Translates to: VCASCWVFFTLSSAILVGCLQSC*QHLHTF Trigger: AAATGTGTGGAGATGCTGTCAGCAGCTCTGAAGGCA...ACCCACAAGGATGGCAGAGGATAAGGTGAAGAAGACCCAGCAGGAAGCACAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS-3UTR CCA 90 bp | TCTGGGTCACGTGGTCTGTGCTTCCTGCTGGGTCTTCTTCACCTTATCCTCTGCTCTGTAGCAGCTGGATaGACATCTGGCAACTGTTCA | + |
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Preference number: 4 (lower is better) Translates to: SGSRGLCFLLGLLHLILCSVAAG*TSGNCS Trigger: TGAACAGTTGCCAGATGTCCATCCAGCTGCTACAGA...GCAGAGGATAAGGTGAAGAAGACCCAGCAGGAAGCACAGACCACGTGACCCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS-3UTR CCA 90 bp | ATTTATTTTTGCTCTGGGTCACGTGGTCTGTGCTTCCTGCTGGGTCTTCTTCACCTGCCACTCCGATCCTaGTGGTCTGTAGCAGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: IYFCSGSRGLCFLLGLLHLPLRS*WSVAAG Trigger: TCCAGCTGCTACAGACCACCAGGATCGGAGTGGCAG...GTGAAGAAGACCCAGCAGGAAGCACAGACCACGTGACCCAGAGCAAAAATAAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS-3UTR CCA 90 bp | TCTGTGCTTCCTGCTGGGTCTTCTTCACCTTATCCTCTGCCATCCTTGTGGGTGCTTCTCTTTCTCCTTTaGTGGTTCTGGGGGAGTCCA | + |
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Preference number: 4 (lower is better) Translates to: SVLPAGSSSPYPLPSLWVLLFLL*WFWGSP Trigger: TGGACTCCCCCAGAACCACCAAAGGAGAAAGAGAAG...CACCCACAAGGATGGCAGAGGATAAGGTGAAGAAGACCCAGCAGGAAGCACAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS-3UTR CCA 90 bp | TCACGTGGTCTGTGCTTCCTGCTGGGTCTTCTTCACCTTATCCTCTGCCATCCTTCCTTTCTTCCTTGGTaGAGAAAGGCCTGCTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: SRGLCFLLGLLHLILCHPSFLPW*RKACFW Trigger: CCAGAAGCAGGCCTTTCTCCACCAAGGAAGAAAGGA...AGGATGGCAGAGGATAAGGTGAAGAAGACCCAGCAGGAAGCACAGACCACGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS-3UTR TCA 90 bp | GTCTGTGCTTCCTGCTGGGTCTTCTTCACCTTATCCTCTGCCATCCTTGTGGGTTTCTGGTTTCCAGTCTaGACAGCCAAGTCCTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: VCASCWVFFTLSSAILVGFWFPV*TAKSFL Trigger: GAGAAAGGACTTGGCTGTTCAGACTGGAAACCAGAA...ACCCACAAGGATGGCAGAGGATAAGGTGAAGAAGACCCAGCAGGAAGCACAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS-3UTR CCA 90 bp | TCACGTGGTCTGTGCTTCCTGCTGGGTCTTCTTCACCTTATCCTCTGCCATCCTTCTTCTCCAGCTTTTTaGCGATCCTCAACAGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: SRGLCFLLGLLHLILCHPSSPAF*RSSTAP Trigger: AGGAGCTGTTGAGGATCGCCAAAAAGCTGGAGAAGA...AGGATGGCAGAGGATAAGGTGAAGAAGACCCAGCAGGAAGCACAGACCACGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS-3UTR GCA 90 bp | ATTTATTTTTGCTCTGGGTCACGTGGTCTGTGCTTCCTGCTGGGTCTTCTTCACTGGGCTCATCAGCACTaGGTGTCTGCACCTGGTTAT | + |
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Preference number: 4 (lower is better) Translates to: IYFCSGSRGLCFLLGLLHWAHQH*VSAPGY Trigger: ATAACCAGGTGCAGACACGCAGTGCTGATGAGCCCA...GTGAAGAAGACCCAGCAGGAAGCACAGACCACGTGACCCAGAGCAAAAATAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS-3UTR CCA 90 bp | TTTATTTATTTTTGCTCTGGGTCACGTGGTCTGTGCTTCCTGCTGGGTCTTCTTTCTGGTGCTCACGGATaGCCTCTTGAGTCATGGCGT | + |
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Preference number: 4 (lower is better) Translates to: FIYFCSGSRGLCFLLGLLSGAHG*PLESWR Trigger: ACGCCATGACTCAAGAGGCCATCCGTGAGCACCAGA...AAGAAGACCCAGCAGGAAGCACAGACCACGTGACCCAGAGCAAAAATAAATAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS-3UTR TCA 90 bp | TCTGTGCTTCCTGCTGGGTCTTCTTCACCTTATCCTCTGCCATCCTTGTGGGTGTCATGTCTGTGCTCTTaGGTTCTTGATAGATATGGT | + |
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Preference number: 4 (lower is better) Translates to: SVLPAGSSSPYPLPSLWVSCLCS*VLDRYG Trigger: ACCATATCTATCAAGAACTCAAGAGCACAGACATGA...CACCCACAAGGATGGCAGAGGATAAGGTGAAGAAGACCCAGCAGGAAGCACAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS-3UTR CCA 90 bp | TATTTATTTATTTTTGCTCTGGGTCACGTGGTCTGTGCTTCCTGCTGGGTCTTCGTGGTCTGTAGCAGCTaGATGGACATCTGGCAACTG | + |
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Preference number: 4 (lower is better) Translates to: YLFIFALGHVVCASCWVFVVCSS*MDIWQL Trigger: CAGTTGCCAGATGTCCATCCAGCTGCTACAGACCAC...GAAGACCCAGCAGGAAGCACAGACCACGTGACCCAGAGCAAAAATAAATAAATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS-3UTR GCA 90 bp | TTATTTATTTTTGCTCTGGGTCACGTGGTCTGTGCTTCCTGCTGGGTCTTCTTCTCTTCTTCTTGCACTTaGTACACCGCAAGAGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: LFIFALGHVVCASCWVFFSSSCT*YTARGQ Trigger: CTGACCTCTTGCGGTGTAGCAAGTGCAAGAAGAAGA...GAAGAAGACCCAGCAGGAAGCACAGACCACGTGACCCAGAGCAAAAATAAATAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS-3UTR TCA 90 bp | TATTTATTTATTTTTGCTCTGGGTCACGTGGTCTGTGCTTCCTGCTGGGTCTTCATGGTCTTCTATTTCTaGGGCCAGCTTGTCACAGTT | + |
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Preference number: 4 (lower is better) Translates to: YLFIFALGHVVCASCWVFMVFYF*GQLVTV Trigger: AACTGTGACAAGCTGGCCTCAGAAATAGAAGACCAT...GAAGACCCAGCAGGAAGCACAGACCACGTGACCCAGAGCAAAAATAAATAAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS TCA 90 bp | CCAAGGACACCACTTCCTTGTCTGAGCAGTGCTTGCGGACTCCGTTaGCTGCCACTCCGATCCTGGTGGTCTGTAGCAGCTGGATGGACA | + |
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Preference number: 5 (lower is better) Translates to: PRTPLPCLSSACGLR*LPLRSWWSVAAGWT Trigger: TGTCCATCCAGCTGCTACAGACCACCAGGATCGGAGTGGCAGTCAACGGAGTCCGCAAGCACTGCTCAGACAAGGAAGTGGTGTCCTTGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102533.11 ENSMUST00000143942.2 |
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| CDS-3UTR CAA 90 bp | TCTGTGCTTCCTGCTGGGTCTTCTTCACCTTATCCTCTGCCATCCTTGTGGGTGCTGGGGTCCTTCAGGTaGCTGATGCGGCTGCGCACA | + |
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Preference number: 5 (lower is better) Translates to: SVLPAGSSSPYPLPSLWVLGSFR*LMRLRT Trigger: TGTGCGCAGCCGCATCAGCAACCTGAAGGACCCCAG...CACCCACAAGGATGGCAGAGGATAAGGTGAAGAAGACCCAGCAGGAAGCACAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS-3UTR CAA 90 bp | CTGTGCTTCCTGCTGGGTCTTCTTCACCTTATCCTCTGCCATCCTTGTGGGTGGCTCACGGATGGCCTCTaGAGTCATGGCGTTCCTCAG | + |
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Preference number: 5 (lower is better) Translates to: LCFLLGLLHLILCHPCGWLTDGL*SHGVPQ Trigger: CTGAGGAACGCCATGACTCAAGAGGCCATCCGTGAG...CCACCCACAAGGATGGCAGAGGATAAGGTGAAGAAGACCCAGCAGGAAGCACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS-3UTR CAA 90 bp | TCTGGGTCACGTGGTCTGTGCTTCCTGCTGGGTCTTCTTCACCTTATCCTCTGCAAGGACACCACTTCCTaGTCTGAGCAGTGCTTGCGG | + |
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Preference number: 5 (lower is better) Translates to: SGSRGLCFLLGLLHLILCKDTTS*SEQCLR Trigger: CCGCAAGCACTGCTCAGACAAGGAAGTGGTGTCCTT...GCAGAGGATAAGGTGAAGAAGACCCAGCAGGAAGCACAGACCACGTGACCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS-3UTR CAA 90 bp | CACGTGGTCTGTGCTTCCTGCTGGGTCTTCTTCACCTTATCCTCTGCCATCCTTCCAGCGAAGGCCTTTTaGGAGAGGAGGTGGTGGATG | + |
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Preference number: 5 (lower is better) Translates to: HVVCASCWVFFTLSSAILPAKAF*ERRWWM Trigger: CATCCACCACCTCCTCTCCAAAAAGGCCTTCGCTGG...AAGGATGGCAGAGGATAAGGTGAAGAAGACCCAGCAGGAAGCACAGACCACGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS TCA 90 bp | GTTGGATCTTTCCAGCGAAGGCCTTTTTGGAGAGGAGGTGGTGGATaGCCTGGAGTCTACAGAGTCTCTCCTAGTTTTGGGCTCTCCCCC | + |
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Preference number: 5 (lower is better) Translates to: VGSFQRRPFWRGGGG*PGVYRVSPSFGLSP Trigger: GGGGGAGAGCCCAAAACTAGGAGAGACTCTGTAGACTCCAGGTCATCCACCACCTCCTCTCCAAAAAGGCCTTCGCTGGAAAGATCCAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102533.11 ENSMUST00000143942.2 |
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| CDS GCA 90 bp | TTAATGAGGACTTTGGCCAAGGACACCACTTCCTTGTCTGAGCAGTaGTTGCGGACTCCGTTGACTGCCACTCCGATCCTGGTGGTCTGT | + |
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Preference number: 5 (lower is better) Translates to: LMRTLAKDTTSLSEQ*LRTPLTATPILVVC Trigger: ACAGACCACCAGGATCGGAGTGGCAGTCAACGGAGTCCGCAAGCACTGCTCAGACAAGGAAGTGGTGTCCTTGGCCAAAGTCCTCATTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102533.11 ENSMUST00000143942.2 |
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| CDS-3UTR CAA 90 bp | TGCTCTGGGTCACGTGGTCTGTGCTTCCTGCTGGGTCTTCTTCACCTTATCCTCTCTTCTCTTTCTCCTTaGGTGGTTCTGGGGGAGTCC | + |
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Preference number: 5 (lower is better) Translates to: CSGSRGLCFLLGLLHLILSSLSP*VVLGES Trigger: GGACTCCCCCAGAACCACCAAAGGAGAAAGAGAAGA...GAGGATAAGGTGAAGAAGACCCAGCAGGAAGCACAGACCACGTGACCCAGAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS TCA 90 bp | CCAGTTTTTAATGAGGACTTTGGCCAAGGACACCACTTCCTTGTCTaGGCAGTGCTTGCGGACTCCGTTGACTGCCACTCCGATCCTGGT | + |
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Preference number: 5 (lower is better) Translates to: PVFNEDFGQGHHFLV*AVLADSVDCHSDPG Trigger: ACCAGGATCGGAGTGGCAGTCAACGGAGTCCGCAAGCACTGCTCAGACAAGGAAGTGGTGTCCTTGGCCAAAGTCCTCATTAAAAACTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102533.11 ENSMUST00000143942.2 |
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| CDS GCA 90 bp | TGCGTGTCTGCACCTGGTTATAGGTACAATTCTTCTTCTTGCACTTaGTACACCGCAAGAGGTCAGTGGTGGTGCCGCCTGTCTTCGCCA | + |
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Preference number: 5 (lower is better) Translates to: CVSAPGYRYNSSSCT*YTARGQWWCRLSSP Trigger: TGGCGAAGACAGGCGGCACCACCACTGACCTCTTGCGGTGTAGCAAGTGCAAGAAGAAGAATTGTACCTATAACCAGGTGCAGACACGCA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS-3UTR CAA 90 bp | TATTTTTGCTCTGGGTCACGTGGTCTGTGCTTCCTGCTGGGTCTTCTTCACCTTAGCATCTCCACACATTaGTCCCGGACAGAGTCCCCG | + |
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Preference number: 5 (lower is better) Translates to: YFCSGSRGLCFLLGLLHLSISTH*SRTESP Trigger: CGGGGACTCTGTCCGGGACAAATGTGTGGAGATGCT...AAGGTGAAGAAGACCCAGCAGGAAGCACAGACCACGTGACCCAGAGCAAAAATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS-3UTR CAA 90 bp | GGGTCACGTGGTCTGTGCTTCCTGCTGGGTCTTCTTCACCTTATCCTCTGCCATTTCTTCTTCTTGCACTaGCTACACCGCAAGAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: GSRGLCFLLGLLHLILCHFFFLH*LHRKRS Trigger: TGACCTCTTGCGGTGTAGCAAGTGCAAGAAGAAGAA...ATGGCAGAGGATAAGGTGAAGAAGACCCAGCAGGAAGCACAGACCACGTGACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS-3UTR CAA 90 bp | GGGTCACGTGGTCTGTGCTTCCTGCTGGGTCTTCTTCACCTTATCCTCTGCCATTTTTTAATGAGGACTTaGGCCAAGGACACCACTTCC | + |
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Preference number: 5 (lower is better) Translates to: GSRGLCFLLGLLHLILCHFLMRT*AKDTTS Trigger: GGAAGTGGTGTCCTTGGCCAAAGTCCTCATTAAAAA...ATGGCAGAGGATAAGGTGAAGAAGACCCAGCAGGAAGCACAGACCACGTGACCC 51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS-3UTR CAA 90 bp | TTTATTTATTTTTGCTCTGGGTCACGTGGTCTGTGCTTCCTGCTGGGTCTTCTTTTGTCTGAGCAGTGCTaGCGGACTCCGTTGACTGCC | + |
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Preference number: 5 (lower is better) Translates to: FIYFCSGSRGLCFLLGLLLSEQC*RTPLTA Trigger: GGCAGTCAACGGAGTCCGCAAGCACTGCTCAGACAA...AAGAAGACCCAGCAGGAAGCACAGACCACGTGACCCAGAGCAAAAATAAATAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS-3UTR CAA 90 bp | TCTGGGTCACGTGGTCTGTGCTTCCTGCTGGGTCTTCTTCACCTTATCCTCTGCCGATTCCCACATTCATaGCATAAGACAAAAGTGGTC | + |
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Preference number: 5 (lower is better) Translates to: SGSRGLCFLLGLLHLILCRFPHS*HKTKVV Trigger: GACCACTTTTGTCTTATGCAATGAATGTGGGAATCG...GCAGAGGATAAGGTGAAGAAGACCCAGCAGGAAGCACAGACCACGTGACCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS-3UTR CAA 90 bp | TATTTTTGCTCTGGGTCACGTGGTCTGTGCTTCCTGCTGGGTCTTCTTCACCTTGTACAATTCTTCTTCTaGCACTTGCTACACCGCAAG | + |
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Preference number: 5 (lower is better) Translates to: YFCSGSRGLCFLLGLLHLVQFFF*HLLHRK Trigger: CTTGCGGTGTAGCAAGTGCAAGAAGAAGAATTGTAC...AAGGTGAAGAAGACCCAGCAGGAAGCACAGACCACGTGACCCAGAGCAAAAATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS-3UTR CAA 90 bp | TTATTTATTTTTGCTCTGGGTCACGTGGTCTGTGCTTCCTGCTGGGTCTTCTTCTTAGATTTGCTGCTGTaGGATCTTTCCAGCGAAGGC | + |
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Preference number: 5 (lower is better) Translates to: LFIFALGHVVCASCWVFFLDLLL*DLSSEG Trigger: GCCTTCGCTGGAAAGATCCAACAGCAGCAAATCTAA...GAAGAAGACCCAGCAGGAAGCACAGACCACGTGACCCAGAGCAAAAATAAATAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS-3UTR CAA 90 bp | TATTTATTTTTGCTCTGGGTCACGTGGTCTGTGCTTCCTGCTGGGTCTTCTTCAGTTTCCACTTTAGATTaGCTGCTGTTGGATCTTTCC | + |
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Preference number: 5 (lower is better) Translates to: YLFLLWVTWSVLPAGSSSVSTLD*LLLDLS Trigger: GGAAAGATCCAACAGCAGCAAATCTAAAGTGGAAAC...TGAAGAAGACCCAGCAGGAAGCACAGACCACGTGACCCAGAGCAAAAATAAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS-3UTR CAA 90 bp | TTTATTTATTTTTGCTCTGGGTCACGTGGTCTGTGCTTCCTGCTGGGTCTTCTTTGTGCTCTTGAGTTCTaGATAGATATGGTCTTCTAT | + |
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Preference number: 5 (lower is better) Translates to: FIYFCSGSRGLCFLLGLLCALEF*IDMVFY Trigger: ATAGAAGACCATATCTATCAAGAACTCAAGAGCACA...AAGAAGACCCAGCAGGAAGCACAGACCACGTGACCCAGAGCAAAAATAAATAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS CCA 72 bp | TCCTTTGGTGGTTCTGGGGGAGTCACTAGCCAGGCATaGCCTCTCCCACATGCTGGCAGGAAGCCCCATCTC | + |
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Preference number: 6 (lower is better) Translates to: SFGGSGGVTSQA*PLPHAGRKPHL Trigger: GAGATGGGGCTTCCTGCCAGCATGTGGGAGAGGCCATGCCTGGCTAGTGACTCCCCCAGAACCACCAAAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143942.2 |
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| CDS GCA 72 bp | TCTTGCACTTGCTACACCGCAAGAGGTCAGTGGTGGTaGCGCCTGTCTTCGCCATCTGGTGCTCACGGATGG | + |
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Preference number: 6 (lower is better) Translates to: SCTCYTARGQWW*RLSSPSGAHGW Trigger: CCATCCGTGAGCACCAGATGGCGAAGACAGGCGGCACCACCACTGACCTCTTGCGGTGTAGCAAGTGCAAGA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS CAA 90 bp | GCCAAGGACACCACTTCCTTGTCTGAGCAGTGCTTGCGGACTCCGTaGACTGCCACTCCGATCCTGGTGGTCTGTAGCAGCTGGATGGAC | + |
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Preference number: 6 (lower is better) Translates to: AKDTTSLSEQCLRTP*TATPILVVCSSWMD Trigger: GTCCATCCAGCTGCTACAGACCACCAGGATCGGAGTGGCAGTCAACGGAGTCCGCAAGCACTGCTCAGACAAGGAAGTGGTGTCCTTGGC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102533.11 ENSMUST00000143942.2 |
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| CDS TCA 72 bp | CCACTTCCTTGTCTGAGCAGTGCTTGCGGACTCCGTTaGCTGCCACTCCGATCCTGGTGGTCTGTAGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: PLPCLSSACGLR*LPLRSWWSVAA Trigger: AGCTGCTACAGACCACCAGGATCGGAGTGGCAGTCAACGGAGTCCGCAAGCACTGCTCAGACAAGGAAGTGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102533.11 ENSMUST00000143942.2 |
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| CDS CAA 72 bp | ACCACTTCCTTGTCTGAGCAGTGCTTGCGGACTCCGTaGACTGCCACTCCGATCCTGGTGGTCTGTAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: TTSLSEQCLRTP*TATPILVVCSS Trigger: GCTGCTACAGACCACCAGGATCGGAGTGGCAGTCAACGGAGTCCGCAAGCACTGCTCAGACAAGGAAGTGGT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102533.11 ENSMUST00000143942.2 |
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| CDS CAA 72 bp | TTGGCCAAGGACACCACTTCCTTGTCTGAGCAGTGCTaGCGGACTCCGTTGACTGCCACTCCGATCCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: LAKDTTSLSEQC*RTPLTATPILV Trigger: CACCAGGATCGGAGTGGCAGTCAACGGAGTCCGCAAGCACTGCTCAGACAAGGAAGTGGTGTCCTTGGCCAA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102533.11 ENSMUST00000143942.2 |
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| CDS CAA 90 bp | ATGAGGACTTTGGCCAAGGACACCACTTCCTTGTCTGAGCAGTGCTaGCGGACTCCGTTGACTGCCACTCCGATCCTGGTGGTCTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: MRTLAKDTTSLSEQC*RTPLTATPILVVCS Trigger: GCTACAGACCACCAGGATCGGAGTGGCAGTCAACGGAGTCCGCAAGCACTGCTCAGACAAGGAAGTGGTGTCCTTGGCCAAAGTCCTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102533.11 ENSMUST00000143942.2 |
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| CDS GCA 72 bp | ACTTTGGCCAAGGACACCACTTCCTTGTCTGAGCAGTaGTTGCGGACTCCGTTGACTGCCACTCCGATCCTG | + |
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Preference number: 6 (lower is better) Translates to: TLAKDTTSLSEQ*LRTPLTATPIL Trigger: CAGGATCGGAGTGGCAGTCAACGGAGTCCGCAAGCACTGCTCAGACAAGGAAGTGGTGTCCTTGGCCAAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102533.11 ENSMUST00000143942.2 |
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| CDS CCA 72 bp | CCGATCCTGGTGGTCTGTAGCAGCTGGATGGACATCTaGCAACTGTTCAGCTTCTTCAGAAGGTCCAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: PILVVCSSWMDI*QLFSFFRRSRA Trigger: GGCCCTGGACCTTCTGAAGAAGCTGAACAGTTGCCAGATGTCCATCCAGCTGCTACAGACCACCAGGATCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102533.11 ENSMUST00000143942.2 |
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| CDS TCA 72 bp | AATGAGGACTTTGGCCAAGGACACCACTTCCTTGTCTaGGCAGTGCTTGCGGACTCCGTTGACTGCCACTCC | + |
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Preference number: 6 (lower is better) Translates to: NEDFGQGHHFLV*AVLADSVDCHS Trigger: GGAGTGGCAGTCAACGGAGTCCGCAAGCACTGCTCAGACAAGGAAGTGGTGTCCTTGGCCAAAGTCCTCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102533.11 ENSMUST00000143942.2 |
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| CDS CAA 90 bp | GTTCTGGGGGAGTCCAGCAGCCGCTTCCAGTTTTTAATGAGGACTTaGGCCAAGGACACCACTTCCTTGTCTGAGCAGTGCTTGCGGACT | + |
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Preference number: 6 (lower is better) Translates to: VLGESSSRFQFLMRT*AKDTTSLSEQCLRT Trigger: AGTCCGCAAGCACTGCTCAGACAAGGAAGTGGTGTCCTTGGCCAAAGTCCTCATTAAAAACTGGAAGCGGCTGCTGGACTCCCCCAGAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS GCA 72 bp | GCACCTGGTTATAGGTACAATTCTTCTTCTTGCACTTaGTACACCGCAAGAGGTCAGTGGTGGTGCCGCCTG | + |
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Preference number: 6 (lower is better) Translates to: APGYRYNSSSCT*YTARGQWWCRL Trigger: CAGGCGGCACCACCACTGACCTCTTGCGGTGTAGCAAGTGCAAGAAGAAGAATTGTACCTATAACCAGGTGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS CAA 72 bp | GAGTCCAGCAGCCGCTTCCAGTTTTTAATGAGGACTTaGGCCAAGGACACCACTTCCTTGTCTGAGCAGTGC | + |
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Preference number: 6 (lower is better) Translates to: ESSSRFQFLMRT*AKDTTSLSEQC Trigger: GCACTGCTCAGACAAGGAAGTGGTGTCCTTGGCCAAAGTCCTCATTAAAAACTGGAAGCGGCTGCTGGACTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS CAA 72 bp | GGGCTGCTGGGGGTCGTGGGAGTTTCCACTTTAGATTaGCTGCTGTTGGATCTTTCCAGCGAAGGCCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: GLLGVVGVSTLD*LLLDLSSEGLF Trigger: AAAAAGGCCTTCGCTGGAAAGATCCAACAGCAGCAAATCTAAAGTGGAAACTCCCACGACCCCCAGCAGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS CAA 72 bp | TCACCCAGCAGCCGCTTCCAGTTTTTAATGAGGACTTaGGCCAAGGACACCACTTCCTTGTCTGAGCAGTGC | + |
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Preference number: 6 (lower is better) Translates to: SPSSRFQFLMRT*AKDTTSLSEQC Trigger: GCACTGCTCAGACAAGGAAGTGGTGTCCTTGGCCAAAGTCCTCATTAAAAACTGGAAGCGGCTGCTGGGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143942.2 |
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| CDS CAA 90 bp | AGTCCTTTCTCCTTCTTCGCTTTTTCTCTTTCTTCTCTTTCTCCTTaGGTGGTTCTGGGGGAGTCACTAGCCAGGCATGGCCTCTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: SPFSFFAFSLSSLSP*VVLGESLARHGLSH Trigger: GTGGGAGAGGCCATGCCTGGCTAGTGACTCCCCCAGAACCACCAAAGGAGAAAGAGAAGAAAGAGAAAAAGCGAAGAAGGAGAAAGGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000143942.2 |
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| CDS CAA 72 bp | TTTTTAATGAGGACTTTGGCCAAGGACACCACTTCCTaGTCTGAGCAGTGCTTGCGGACTCCGTTGACTGCC | + |
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Preference number: 6 (lower is better) Translates to: FLMRTLAKDTTS*SEQCLRTPLTA Trigger: GGCAGTCAACGGAGTCCGCAAGCACTGCTCAGACAAGGAAGTGGTGTCCTTGGCCAAAGTCCTCATTAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102533.11 ENSMUST00000143942.2 |
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| CDS CAA 72 bp | ATTTGCTGCTGTTGGATCTTTCCAGCGAAGGCCTTTTaGGAGAGGAGGTGGTGGATGACCTGGAGTCTACAG | + |
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Preference number: 6 (lower is better) Translates to: ICCCWIFPAKAF*ERRWWMTWSLQ Trigger: CTGTAGACTCCAGGTCATCCACCACCTCCTCTCCAAAAAGGCCTTCGCTGGAAAGATCCAACAGCAGCAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102533.11 ENSMUST00000143942.2 |
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| CDS GCA 72 bp | GTGTCTGCACCTGGTTATAGGTACAATTCTTCTTCTTaGACTTGCTACACCGCAAGAGGTCAGTGGTGGTGC | + |
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Preference number: 6 (lower is better) Translates to: VSAPGYRYNSSS*TCYTARGQWWC Trigger: GCACCACCACTGACCTCTTGCGGTGTAGCAAGTGCAAGAAGAAGAATTGTACCTATAACCAGGTGCAGACAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS CCA 72 bp | TCTTCGCTTTTTCTCTTTCTTCTCTTTCTCCTTTGGTaGTTCTGGGGGAGTCCAGCAGCCGCTTCCAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: SSLFLFLLFLLW*FWGSPAAASSF Trigger: AAAACTGGAAGCGGCTGCTGGACTCCCCCAGAACCACCAAAGGAGAAAGAGAAGAAAGAGAAAAAGCGAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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| CDS TCA 72 bp | GCTCTTGAGTTCTTGATAGATATGGTCTTCTATTTCTaGGGCCAGCTTGTCACAGTTGACTCCATAGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: ALEFLIDMVFYF*GQLVTVDSIVL Trigger: AAGGACTATGGAGTCAACTGTGACAAGCTGGCCTCAGAAATAGAAGACCATATCTATCAAGAACTCAAGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102533.11 |
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