Pregenerated sensors for TCEA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059540Ensembl transcript IDs: ENSMUST00000103042.10, ENSMUST00000129006.2, ENSMUST00000129745.8
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCACCTTCAGGGTATCTCCAGAGAAGCTGTGTCCACCAAGAACATTaGAGGAAGGACAGTGTTAGCCATGGCCAGGGTTACGTCAGAAGG | + |
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Preference number: 1 (lower is better) Translates to: PPSGYLQRSCVHQEH*RKDSVSHGQGYVRR Trigger: CCTTCTGACGTAACCCTGGCCATGGCTAACACTGTCCTTCCTGCAATGTTCTTGGTGGACACAGCTTCTCTGGAGATACCCTGAAGGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
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| 3UTR CCA 90 bp | TTTAATAATGAGGTAAAGAGGGCAAAAAGTGCACACCAGGTGGGCTaGAACAGGGCGTGCCACCTTCAGGGTATCTCCAGAGAAGCTGTG | + |
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Preference number: 1 (lower is better) Translates to: FNNEVKRAKSAHQVG*NRACHLQGISREAV Trigger: CACAGCTTCTCTGGAGATACCCTGAAGGTGGCACGCCCTGTTCCAGCCCACCTGGTGTGCACTTTTTGCCCTCTTTACCTCATTATTAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
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| 3UTR-3UTR GCA 90 bp | AATGAGGTAAAGAGGGCAAAAAGTGCACACCAGGTGGGCTGGAACAGGGCGTGCGTCCACCAAGAACATTaGAGGAAGGACAGTGTTAGC | + |
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Preference number: 2 (lower is better) Translates to: NEVKRAKSAHQVGWNRACVHQEH*RKDSVS Trigger: GCTAACACTGTCCTTCCTGCAATGTTCTTGGTGGAC...GCACGCCCTGTTCCAGCCCACCTGGTGTGCACTTTTTGCCCTCTTTACCTCATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
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| 3UTR GCA 72 bp | GGGTATCTCCAGAGAAGCTGTGTCCACCAAGAACATTaGAGGAAGGACAGTGTTAGCCATGGCCAGGGTTAC | + |
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Preference number: 3 (lower is better) Translates to: GYLQRSCVHQEH*RKDSVSHGQGY Trigger: GTAACCCTGGCCATGGCTAACACTGTCCTTCCTGCAATGTTCTTGGTGGACACAGCTTCTCTGGAGATACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
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| CDS-3UTR CCA 90 bp | GTGGGCTGGAACAGGGCGTGCCACCTTCAGGGTATCTCCAGAGAAGCTGTGTCCACGGCCACGTGGTCGTaGTCAGTTTGCAGGGCCAAA | + |
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Preference number: 4 (lower is better) Translates to: VGWNRACHLQGISREAVSTATWS*SVCRAK Trigger: TTTGGCCCTGCAAACTGACCACGACCACGTGGCCGT...GGACACAGCTTCTCTGGAGATACCCTGAAGGTGGCACGCCCTGTTCCAGCCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
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| CDS-3UTR CCA 90 bp | GAGGTAAAGAGGGCAAAAAGTGCACACCAGGTGGGCTGGAACAGGGCGTGCCACACGGCCACGTGGTCGTaGTCAGTTTGCAGGGCCAAA | + |
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Preference number: 4 (lower is better) Translates to: EVKRAKSAHQVGWNRACHTATWS*SVCRAK Trigger: TTTGGCCCTGCAAACTGACCACGACCACGTGGCCGT...GTGGCACGCCCTGTTCCAGCCCACCTGGTGTGCACTTTTTGCCCTCTTTACCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
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| CDS-3UTR CCA 90 bp | TGGGCTGGAACAGGGCGTGCCACCTTCAGGGTATCTCCAGAGAAGCTGTGTCCAGGATGGGGTCCTAGGTaGATCTGGCTTCTTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WAGTGRATFRVSPEKLCPGWGPR*IWLLAA Trigger: AGCTGCAAGAAGCCAGATCCACCTAGGACCCCATCC...TGGACACAGCTTCTCTGGAGATACCCTGAAGGTGGCACGCCCTGTTCCAGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
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| CDS-3UTR CCA 90 bp | GCTGGAACAGGGCGTGCCACCTTCAGGGTATCTCCAGAGAAGCTGTGTCCACCAGGATGGGGTCCTAGGTaGATCTGGCTTCTTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AGTGRATFRVSPEKLCPPGWGPR*IWLLAA Trigger: AGCTGCAAGAAGCCAGATCCACCTAGGACCCCATCC...TGGTGGACACAGCTTCTCTGGAGATACCCTGAAGGTGGCACGCCCTGTTCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
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| CDS-3UTR TCA 90 bp | CTGGAACAGGGCGTGCCACCTTCAGGGTATCTCCAGAGAAGCTGTGTCCACCAAGGTGTGCCCCTCCCTTaGTTCCTGGATTTGCCATCA | + |
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Preference number: 4 (lower is better) Translates to: LEQGVPPSGYLQRSCVHQGVPLP*FLDLPS Trigger: TGATGGCAAATCCAGGAATCAAGGGAGGGGCACACC...TTGGTGGACACAGCTTCTCTGGAGATACCCTGAAGGTGGCACGCCCTGTTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
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| CDS-3UTR GCA 90 bp | TGGGCTGGAACAGGGCGTGCCACCTTCAGGGTATCTCCAGAGAAGCTGTGTCCATGGTCGTGGTCAGTTTaGAGGGCCAAAGTCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: WAGTGRATFRVSPEKLCPWSWSV*RAKVSI Trigger: GATGCTGACTTTGGCCCTGCAAACTGACCACGACCA...TGGACACAGCTTCTCTGGAGATACCCTGAAGGTGGCACGCCCTGTTCCAGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
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| CDS-3UTR GCA 90 bp | GTGGGCTGGAACAGGGCGTGCCACCTTCAGGGTATCTCCAGAGAAGCTGTGTCCGTCATCACAGCTATCTaGTGGGGTGTAATGGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: VGWNRACHLQGISREAVSVITAI*WGVMAP Trigger: TGGTGCCATTACACCCCAGCAGATAGCTGTGATGAC...GGACACAGCTTCTCTGGAGATACCCTGAAGGTGGCACGCCCTGTTCCAGCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
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| CDS-3UTR TCA 90 bp | CACCAGGTGGGCTGGAACAGGGCGTGCCACCTTCAGGGTATCTCCAGAGAAGCTACTTGGCAAGTGCAATaGGCTCCTCATCTGAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: HQVGWNRACHLQGISREATWQVQ*APHLNS Trigger: AGAGTTCAGATGAGGAGCTCATTGCACTTGCCAAGT...AGCTTCTCTGGAGATACCCTGAAGGTGGCACGCCCTGTTCCAGCCCACCTGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
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| CDS-3UTR TCA 90 bp | CTGGAACAGGGCGTGCCACCTTCAGGGTATCTCCAGAGAAGCTGTGTCCACCAAGTACAGCATCACAGGTaGTGGGCACTTGGGGAAATG | + |
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Preference number: 4 (lower is better) Translates to: LEQGVPPSGYLQRSCVHQVQHHR*WALGEM Trigger: CATTTCCCCAAGTGCCCATCACCTGTGATGCTGTAC...TTGGTGGACACAGCTTCTCTGGAGATACCCTGAAGGTGGCACGCCCTGTTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
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| CDS-3UTR TCA 90 bp | TGGAACAGGGCGTGCCACCTTCAGGGTATCTCCAGAGAAGCTGTGTCCACCAAGTGCACTTGTTGCAGGTaGACAGGTCAGTCTGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: WNRACHLQGISREAVSTKCTCCR*TGQSVC Trigger: GCACACAGACTGACCTGTTCACCTGCAACAAGTGCA...CTTGGTGGACACAGCTTCTCTGGAGATACCCTGAAGGTGGCACGCCCTGTTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
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| CDS-3UTR CCA 90 bp | GTCCACCAAGAACATTGCAGGAAGGACAGTGTTAGCCATGGCCAGGGTTACGTCACGGCCACGTGGTCGTaGTCAGTTTGCAGGGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VHQEHCRKDSVSHGQGYVTATWS*SVCRAK Trigger: TTTGGCCCTGCAAACTGACCACGACCACGTGGCCGT...GACGTAACCCTGGCCATGGCTAACACTGTCCTTCCTGCAATGTTCTTGGTGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
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| CDS-3UTR TCA 90 bp | GAACAGGGCGTGCCACCTTCAGGGTATCTCCAGAGAAGCTGTGTCCACCAAGAAGTACAGCATCACAGGTaGTGGGCACTTGGGGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: EQGVPPSGYLQRSCVHQEVQHHR*WALGEM Trigger: CATTTCCCCAAGTGCCCATCACCTGTGATGCTGTAC...TTCTTGGTGGACACAGCTTCTCTGGAGATACCCTGAAGGTGGCACGCCCTGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
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| CDS-3UTR TCA 90 bp | GAACAGGGCGTGCCACCTTCAGGGTATCTCCAGAGAAGCTGTGTCCACCAAGAATGCACTTGTTGCAGGTaGACAGGTCAGTCTGTGTGC | + |
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Preference number: 4 (lower is better) Translates to: EQGVPPSGYLQRSCVHQECTCCR*TGQSVC Trigger: GCACACAGACTGACCTGTTCACCTGCAACAAGTGCA...TTCTTGGTGGACACAGCTTCTCTGGAGATACCCTGAAGGTGGCACGCCCTGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
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| CDS-3UTR GCA 90 bp | AACAGGGCGTGCCACCTTCAGGGTATCTCCAGAGAAGCTGTGTCCACCAAGAACTGGTCGTGGTCAGTTTaGAGGGCCAAAGTCAGCATC | + |
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Preference number: 4 (lower is better) Translates to: NRACHLQGISREAVSTKNWSWSV*RAKVSI Trigger: GATGCTGACTTTGGCCCTGCAAACTGACCACGACCA...GTTCTTGGTGGACACAGCTTCTCTGGAGATACCCTGAAGGTGGCACGCCCTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
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| CDS-3UTR CCA 90 bp | GTCCACCAAGAACATTGCAGGAAGGACAGTGTTAGCCATGGCCAGGGTTACGTCGGATGGGGTCCTAGGTaGATCTGGCTTCTTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VHQEHCRKDSVSHGQGYVGWGPR*IWLLAA Trigger: AGCTGCAAGAAGCCAGATCCACCTAGGACCCCATCC...GACGTAACCCTGGCCATGGCTAACACTGTCCTTCCTGCAATGTTCTTGGTGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
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| CDS-3UTR CCA 90 bp | TGGAACAGGGCGTGCCACCTTCAGGGTATCTCCAGAGAAGCTGTGTCCACCAAGATCACAGCTATCTGCTaGGGTGTAATGGCACCACAC | + |
|
Preference number: 4 (lower is better) Translates to: WNRACHLQGISREAVSTKITAIC*GVMAPH Trigger: GTGTGGTGCCATTACACCCCAGCAGATAGCTGTGAT...CTTGGTGGACACAGCTTCTCTGGAGATACCCTGAAGGTGGCACGCCCTGTTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
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| CDS-3UTR GCA 90 bp | AGCTGTGTCCACCAAGAACATTGCAGGAAGGACAGTGTTAGCCATGGCCAGGGTTGGTCGTGGTCAGTTTaGAGGGCCAAAGTCAGCATC | + |
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Preference number: 4 (lower is better) Translates to: SCVHQEHCRKDSVSHGQGWSWSV*RAKVSI Trigger: GATGCTGACTTTGGCCCTGCAAACTGACCACGACCA...ACCCTGGCCATGGCTAACACTGTCCTTCCTGCAATGTTCTTGGTGGACACAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
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| CDS-3UTR CCA 90 bp | AAGAACATTGCAGGAAGGACAGTGTTAGCCATGGCCAGGGTTACGTCAGAAGGGCCTCCGCGTTCTTCCTaGTCACCATTTTGTCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: KNIAGRTVLAMARVTSEGPPRSS*SPFCPA Trigger: GGCTGGACAAAATGGTGACCAGGAAGAACGCGGAGG...CCCTTCTGACGTAACCCTGGCCATGGCTAACACTGTCCTTCCTGCAATGTTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103042.10 |
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| CDS-3UTR CCA 90 bp | AGCTGTGTCCACCAAGAACATTGCAGGAAGGACAGTGTTAGCCATGGCCAGGGTGGTCCTAGGTGGATCTaGCTTCTTGCAGCTGAGATC | + |
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Preference number: 4 (lower is better) Translates to: SCVHQEHCRKDSVSHGQGGPRWI*LLAAEI Trigger: GATCTCAGCTGCAAGAAGCCAGATCCACCTAGGACC...ACCCTGGCCATGGCTAACACTGTCCTTCCTGCAATGTTCTTGGTGGACACAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
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| CDS-3UTR TCA 90 bp | CAGGGCGTGCCACCTTCAGGGTATCTCCAGAGAAGCTGTGTCCACCAAGAACATACTTGGCAAGTGCAATaGGCTCCTCATCTGAACTCT | + |
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Preference number: 4 (lower is better) Translates to: QGVPPSGYLQRSCVHQEHTWQVQ*APHLNS Trigger: AGAGTTCAGATGAGGAGCTCATTGCACTTGCCAAGT...ATGTTCTTGGTGGACACAGCTTCTCTGGAGATACCCTGAAGGTGGCACGCCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
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| CDS-3UTR TCA 90 bp | TCAGGGTATCTCCAGAGAAGCTGTGTCCACCAAGAACATTGCAGGAAGGACAGTGGTGTGCCCCTCCCTTaGTTCCTGGATTTGCCATCA | + |
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Preference number: 4 (lower is better) Translates to: SGYLQRSCVHQEHCRKDSGVPLP*FLDLPS Trigger: TGATGGCAAATCCAGGAATCAAGGGAGGGGCACACC...ACTGTCCTTCCTGCAATGTTCTTGGTGGACACAGCTTCTCTGGAGATACCCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
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| CDS-3UTR TCA 90 bp | CTTCAGGGTATCTCCAGAGAAGCTGTGTCCACCAAGAACATTGCAGGAAGGACAGGTGTGCCCCTCCCTTaGTTCCTGGATTTGCCATCA | + |
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Preference number: 4 (lower is better) Translates to: LQGISREAVSTKNIAGRTGVPLP*FLDLPS Trigger: TGATGGCAAATCCAGGAATCAAGGGAGGGGCACACC...TGTCCTTCCTGCAATGTTCTTGGTGGACACAGCTTCTCTGGAGATACCCTGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
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| CDS-3UTR GCA 90 bp | GCTGGAACAGGGCGTGCCACCTTCAGGGTATCTCCAGAGAAGCTGTGTCCACCAGTGGACTGGAGCAAGTaGAATGTAATAGGCATATTC | + |
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Preference number: 4 (lower is better) Translates to: AGTGRATFRVSPEKLCPPVDWSK*NVIGIF Trigger: GAATATGCCTATTACATTGCACTTGCTCCAGTCCAC...TGGTGGACACAGCTTCTCTGGAGATACCCTGAAGGTGGCACGCCCTGTTCCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
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| CDS-3UTR GCA 90 bp | GTGGGCTGGAACAGGGCGTGCCACCTTCAGGGTATCTCCAGAGAAGCTGTGTCCCTTGATTCCTGGATTTaGCATCAGAAACATCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: VGWNRACHLQGISREAVSLDSWI*HQKHPR Trigger: TCTTGGATGTTTCTGATGGCAAATCCAGGAATCAAG...GGACACAGCTTCTCTGGAGATACCCTGAAGGTGGCACGCCCTGTTCCAGCCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
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| CDS-3UTR CCA 90 bp | CTGGAACAGGGCGTGCCACCTTCAGGGTATCTCCAGAGAAGCTGTGTCCACCAACCCTCCCTTGATTCCTaGATTTGCCATCAGAAACAT | + |
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Preference number: 4 (lower is better) Translates to: LEQGVPPSGYLQRSCVHQPSLDS*ICHQKH Trigger: ATGTTTCTGATGGCAAATCCAGGAATCAAGGGAGGG...TTGGTGGACACAGCTTCTCTGGAGATACCCTGAAGGTGGCACGCCCTGTTCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
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| CDS-3UTR CCA 90 bp | TGCCACCTTCAGGGTATCTCCAGAGAAGCTGTGTCCACCAAGAACATTGCAGGAGGTCCTAGGTGGATCTaGCTTCTTGCAGCTGAGATC | + |
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Preference number: 4 (lower is better) Translates to: CHLQGISREAVSTKNIAGGPRWI*LLAAEI Trigger: GATCTCAGCTGCAAGAAGCCAGATCCACCTAGGACC...TCCTGCAATGTTCTTGGTGGACACAGCTTCTCTGGAGATACCCTGAAGGTGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
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| CDS-3UTR CCA 90 bp | GTCCACCAAGAACATTGCAGGAAGGACAGTGTTAGCCATGGCCAGGGTTACGTCATCACAGCTATCTGCTaGGGTGTAATGGCACCACAC | + |
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Preference number: 4 (lower is better) Translates to: VHQEHCRKDSVSHGQGYVITAIC*GVMAPH Trigger: GTGTGGTGCCATTACACCCCAGCAGATAGCTGTGAT...GACGTAACCCTGGCCATGGCTAACACTGTCCTTCCTGCAATGTTCTTGGTGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
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| CDS-3UTR TCA 90 bp | CTTCAGGGTATCTCCAGAGAAGCTGTGTCCACCAAGAACATTGCAGGAAGGACAGTACAGCATCACAGGTaGTGGGCACTTGGGGAAATG | + |
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Preference number: 4 (lower is better) Translates to: LQGISREAVSTKNIAGRTVQHHR*WALGEM Trigger: CATTTCCCCAAGTGCCCATCACCTGTGATGCTGTAC...TGTCCTTCCTGCAATGTTCTTGGTGGACACAGCTTCTCTGGAGATACCCTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
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| CDS-3UTR TCA 90 bp | CTTCAGGGTATCTCCAGAGAAGCTGTGTCCACCAAGAACATTGCAGGAAGGACATGCACTTGTTGCAGGTaGACAGGTCAGTCTGTGTGC | + |
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Preference number: 4 (lower is better) Translates to: LQGISREAVSTKNIAGRTCTCCR*TGQSVC Trigger: GCACACAGACTGACCTGTTCACCTGCAACAAGTGCA...TGTCCTTCCTGCAATGTTCTTGGTGGACACAGCTTCTCTGGAGATACCCTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
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| CDS-3UTR GCA 90 bp | TGCCACCTTCAGGGTATCTCCAGAGAAGCTGTGTCCACCAAGAACATTGCAGGAGTCATCACAGCTATCTaGTGGGGTGTAATGGCACCA | + |
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Preference number: 4 (lower is better) Translates to: CHLQGISREAVSTKNIAGVITAI*WGVMAP Trigger: TGGTGCCATTACACCCCAGCAGATAGCTGTGATGAC...TCCTGCAATGTTCTTGGTGGACACAGCTTCTCTGGAGATACCCTGAAGGTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
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| CDS-3UTR GCA 90 bp | AAGAACATTGCAGGAAGGACAGTGTTAGCCATGGCCAGGGTTACGTCAGAAGGGGTCATCACAGCTATCTaGTGGGGTGTAATGGCACCA | + |
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Preference number: 4 (lower is better) Translates to: KNIAGRTVLAMARVTSEGVITAI*WGVMAP Trigger: TGGTGCCATTACACCCCAGCAGATAGCTGTGATGAC...CCCTTCTGACGTAACCCTGGCCATGGCTAACACTGTCCTTCCTGCAATGTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
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| CDS-3UTR GCA 90 bp | AACAGGGCGTGCCACCTTCAGGGTATCTCCAGAGAAGCTGTGTCCACCAAGAACGTGGACTGGAGCAAGTaGAATGTAATAGGCATATTC | + |
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Preference number: 4 (lower is better) Translates to: NRACHLQGISREAVSTKNVDWSK*NVIGIF Trigger: GAATATGCCTATTACATTGCACTTGCTCCAGTCCAC...GTTCTTGGTGGACACAGCTTCTCTGGAGATACCCTGAAGGTGGCACGCCCTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
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| CDS-3UTR CCA 90 bp | AGCTGTGTCCACCAAGAACATTGCAGGAAGGACAGTGTTAGCCATGGCCAGGGTCCCTCCCTTGATTCCTaGATTTGCCATCAGAAACAT | + |
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Preference number: 4 (lower is better) Translates to: SCVHQEHCRKDSVSHGQGPSLDS*ICHQKH Trigger: ATGTTTCTGATGGCAAATCCAGGAATCAAGGGAGGG...ACCCTGGCCATGGCTAACACTGTCCTTCCTGCAATGTTCTTGGTGGACACAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
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| CDS-3UTR GCA 90 bp | GTCCACCAAGAACATTGCAGGAAGGACAGTGTTAGCCATGGCCAGGGTTACGTCGTGGACTGGAGCAAGTaGAATGTAATAGGCATATTC | + |
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Preference number: 4 (lower is better) Translates to: VHQEHCRKDSVSHGQGYVVDWSK*NVIGIF Trigger: GAATATGCCTATTACATTGCACTTGCTCCAGTCCAC...GACGTAACCCTGGCCATGGCTAACACTGTCCTTCCTGCAATGTTCTTGGTGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
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| CDS-3UTR GCA 90 bp | GGCGTGCCACCTTCAGGGTATCTCCAGAGAAGCTGTGTCCACCAAGAACATTGCCTTGATTCCTGGATTTaGCATCAGAAACATCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: GVPPSGYLQRSCVHQEHCLDSWI*HQKHPR Trigger: TCTTGGATGTTTCTGATGGCAAATCCAGGAATCAAG...GCAATGTTCTTGGTGGACACAGCTTCTCTGGAGATACCCTGAAGGTGGCACGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
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| CDS-3UTR CAA 90 bp | CACCAGGTGGGCTGGAACAGGGCGTGCCACCTTCAGGGTATCTCCAGAGAAGCTTTCCTGGTCACCATTTaGTCCAGCCTCCGGGCGATA | + |
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Preference number: 5 (lower is better) Translates to: HQVGWNRACHLQGISREAFLVTI*SSLRAI Trigger: TATCGCCCGGAGGCTGGACAAAATGGTGACCAGGAA...AGCTTCTCTGGAGATACCCTGAAGGTGGCACGCCCTGTTCCAGCCCACCTGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103042.10 |
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| CDS-3UTR CAA 90 bp | CACCAGGTGGGCTGGAACAGGGCGTGCCACCTTCAGGGTATCTCCAGAGAAGCTGACTTGATGAGGGACTaGGCAAGTGCAATGAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: HQVGWNRACHLQGISREADLMRD*ASAMSS Trigger: GGAGCTCATTGCACTTGCCAAGTCCCTCATCAAGTC...AGCTTCTCTGGAGATACCCTGAAGGTGGCACGCCCTGTTCCAGCCCACCTGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
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| CDS-3UTR CAA 90 bp | GTGGGCTGGAACAGGGCGTGCCACCTTCAGGGTATCTCCAGAGAAGCTGTGTCCGACTTGATGAGGGACTaGGCAAGTGCAATGAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VGWNRACHLQGISREAVSDLMRD*ASAMSS Trigger: GGAGCTCATTGCACTTGCCAAGTCCCTCATCAAGTC...GGACACAGCTTCTCTGGAGATACCCTGAAGGTGGCACGCCCTGTTCCAGCCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
||
| CDS-3UTR CAA 90 bp | CACCAGGTGGGCTGGAACAGGGCGTGCCACCTTCAGGGTATCTCCAGAGAAGCTTCCTTAGTCATGGCCTaGCGAATCTCCTTCAGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: HQVGWNRACHLQGISREASLVMA*RISFSS Trigger: CGAGCTGAAGGAGATTCGCAAGGCCATGACTAAGGA...AGCTTCTCTGGAGATACCCTGAAGGTGGCACGCCCTGTTCCAGCCCACCTGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
||
| CDS CCA 90 bp | AGCTCGTCACTGGCCATCTCCTCTGATGTCATCACAGCTATCTGCTaGGGTGTAATGGCACCACACAACACATTCCGCCGTAGACCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SSSLAISSDVITAIC*GVMAPHNTFRRRPG Trigger: CCCTGGTCTACGGCGGAATGTGTTGTGTGGTGCCATTACACCCCAGCAGATAGCTGTGATGACATCAGAGGAGATGGCCAGTGACGAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
||
| CDS-3UTR CAA 90 bp | TGGGCTGGAACAGGGCGTGCCACCTTCAGGGTATCTCCAGAGAAGCTGTGTCCAACAGGTGATGGGCACTaGGGGAAATGTAGTGATCCT | + |
|
Preference number: 5 (lower is better) Translates to: WAGTGRATFRVSPEKLCPTGDGH*GKCSDP Trigger: AGGATCACTACATTTCCCCAAGTGCCCATCACCTGT...TGGACACAGCTTCTCTGGAGATACCCTGAAGGTGGCACGCCCTGTTCCAGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
||
| CDS-3UTR CAA 90 bp | ACAGGGCGTGCCACCTTCAGGGTATCTCCAGAGAAGCTGTGTCCACCAAGAACAGTGGTCGTGGTCAGTTaGCAGGGCCAAAGTCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: TGRATFRVSPEKLCPPRTVVVVS*QGQSQH Trigger: ATGCTGACTTTGGCCCTGCAAACTGACCACGACCAC...TGTTCTTGGTGGACACAGCTTCTCTGGAGATACCCTGAAGGTGGCACGCCCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
||
| CDS-3UTR CAA 90 bp | CACCAGGTGGGCTGGAACAGGGCGTGCCACCTTCAGGGTATCTCCAGAGAAGCTTTCTTCTTCCTGCACTaGTTGCAGGTGAACAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: HQVGWNRACHLQGISREAFFFLH*LQVNRS Trigger: TGACCTGTTCACCTGCAACAAGTGCAGGAAGAAGAA...AGCTTCTCTGGAGATACCCTGAAGGTGGCACGCCCTGTTCCAGCCCACCTGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
||
| CDS TCA 90 bp | GTCAGTATTTCCCACGTCCAGGAAGATGCACTCCTCGATCTGAGATaGCAGATGCTCACAGTTCACACCAACGGCCACGTGGTCGTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VSISHVQEDALLDLR*QMLTVHTNGHVVVV Trigger: GACCACGACCACGTGGCCGTTGGTGTGAACTGTGAGCATCTGTCATCTCAGATCGAGGAGTGCATCTTCCTGGACGTGGGAAATACTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
||
| CDS-3UTR CAA 90 bp | AGCTGTGTCCACCAAGAACATTGCAGGAAGGACAGTGTTAGCCATGGCCAGGGTAGGTGTGCCCCTCCCTaGATTCCTGGATTTGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: SCVHQEHCRKDSVSHGQGRCAPP*IPGFAI Trigger: GATGGCAAATCCAGGAATCAAGGGAGGGGCACACCT...ACCCTGGCCATGGCTAACACTGTCCTTCCTGCAATGTTCTTGGTGGACACAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
||
| CDS GCA 90 bp | TTGATGAGGGACTTGGCAAGTGCAATGAGCTCCTCATCTGAACTCTaGTTGCGCAGAGCATTGACAGACATCCCAACACGGGTGGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: LMRDLASAMSSSSEL*LRRALTDIPTRVDW Trigger: CCAGTCCACCCGTGTTGGGATGTCTGTCAATGCTCTGCGCAAGCAGAGTTCAGATGAGGAGCTCATTGCACTTGCCAAGTCCCTCATCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
||
| CDS GCA 90 bp | TTCAGCTCGTCACTGGCCATCTCCTCTGATGTCATCACAGCTATCTaGTGGGGTGTAATGGCACCACACAACACATTCCGCCGTAGACCA | + |
|
Preference number: 5 (lower is better) Translates to: FSSSLAISSDVITAI*WGVMAPHNTFRRRP Trigger: TGGTCTACGGCGGAATGTGTTGTGTGGTGCCATTACACCCCAGCAGATAGCTGTGATGACATCAGAGGAGATGGCCAGTGACGAGCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
||
| CDS CCA 90 bp | TACAGCATCACAGGTGATGGGCACTTGGGGAAATGTAGTGATCCTTaGAGTGGATGGGGTCCTAGGTGGATCTGGCTTCTTGCAGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: YSITGDGHLGKCSDP*SGWGPRWIWLLAAE Trigger: CTCAGCTGCAAGAAGCCAGATCCACCTAGGACCCCATCCACTCCAAGGATCACTACATTTCCCCAAGTGCCCATCACCTGTGATGCTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
||
| CDS-3UTR CAA 90 bp | ACAGGGCGTGCCACCTTCAGGGTATCTCCAGAGAAGCTGTGTCCACCAAGAACAAGCTTCTTCCAGGACTaGATGAGGGACTTGGCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: TGRATFRVSPEKLCPPRTSFFQD*MRDLAS Trigger: ACTTGCCAAGTCCCTCATCAAGTCCTGGAAGAAGCT...TGTTCTTGGTGGACACAGCTTCTCTGGAGATACCCTGAAGGTGGCACGCCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
||
| CDS-3UTR CAA 90 bp | TGCCACCTTCAGGGTATCTCCAGAGAAGCTGTGTCCACCAAGAACATTGCAGGAAGGTGTGCCCCTCCCTaGATTCCTGGATTTGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: CHLQGISREAVSTKNIAGRCAPP*IPGFAI Trigger: GATGGCAAATCCAGGAATCAAGGGAGGGGCACACCT...TCCTGCAATGTTCTTGGTGGACACAGCTTCTCTGGAGATACCCTGAAGGTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
||
| CDS-3UTR CAA 90 bp | GAACAGGGCGTGCCACCTTCAGGGTATCTCCAGAGAAGCTGTGTCCACCAAGAAACAGGTGATGGGCACTaGGGGAAATGTAGTGATCCT | + |
|
Preference number: 5 (lower is better) Translates to: EQGVPPSGYLQRSCVHQETGDGH*GKCSDP Trigger: AGGATCACTACATTTCCCCAAGTGCCCATCACCTGT...TTCTTGGTGGACACAGCTTCTCTGGAGATACCCTGAAGGTGGCACGCCCTGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
||
| CDS-3UTR CAA 90 bp | AGAAGCTGTGTCCACCAAGAACATTGCAGGAAGGACAGTGTTAGCCATGGCCAGGTGGTCGTGGTCAGTTaGCAGGGCCAAAGTCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: RSCVHQEHCRKDSVSHGQVVVVS*QGQSQH Trigger: ATGCTGACTTTGGCCCTGCAAACTGACCACGACCAC...CTGGCCATGGCTAACACTGTCCTTCCTGCAATGTTCTTGGTGGACACAGCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
||
| CDS-3UTR CAA 90 bp | TGGAACAGGGCGTGCCACCTTCAGGGTATCTCCAGAGAAGCTGTGTCCACCAAGTTCTTCTTCCTGCACTaGTTGCAGGTGAACAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: WNRACHLQGISREAVSTKFFFLH*LQVNRS Trigger: TGACCTGTTCACCTGCAACAAGTGCAGGAAGAAGAA...CTTGGTGGACACAGCTTCTCTGGAGATACCCTGAAGGTGGCACGCCCTGTTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
||
| CDS TCA 90 bp | TTCATGTCAGTATTTCCCACGTCCAGGAAGATGCACTCCTCGATCTaGGATGACAGATGCTCACAGTTCACACCAACGGCCACGTGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: FMSVFPTSRKMHSSI*DDRCSQFTPTATWS Trigger: CGACCACGTGGCCGTTGGTGTGAACTGTGAGCATCTGTCATCTCAGATCGAGGAGTGCATCTTCCTGGACGTGGGAAATACTGACATGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
||
| CDS-3UTR CAA 90 bp | ACCAAGAACATTGCAGGAAGGACAGTGTTAGCCATGGCCAGGGTTACGTCAGAAGTGGTCGTGGTCAGTTaGCAGGGCCAAAGTCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: TKNIAGRTVLAMARVTSEVVVVS*QGQSQH Trigger: ATGCTGACTTTGGCCCTGCAAACTGACCACGACCAC...TTCTGACGTAACCCTGGCCATGGCTAACACTGTCCTTCCTGCAATGTTCTTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGAAGCTGTGTCCACCAAGAACATTGCAGGAAGGACAGTGTTAGCCATGGCTCCTTAGTCATGGCCTaGCGAATCTCCTTCAGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: QRSCVHQEHCRKDSVSHGSLVMA*RISFSS Trigger: CGAGCTGAAGGAGATTCGCAAGGCCATGACTAAGGA...GCCATGGCTAACACTGTCCTTCCTGCAATGTTCTTGGTGGACACAGCTTCTCTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
||
| CDS-3UTR CAA 90 bp | TGTGTCCACCAAGAACATTGCAGGAAGGACAGTGTTAGCCATGGCCAGGGTTACTCCTTAGTCATGGCCTaGCGAATCTCCTTCAGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: CVHQEHCRKDSVSHGQGYSLVMA*RISFSS Trigger: CGAGCTGAAGGAGATTCGCAAGGCCATGACTAAGGA...GTAACCCTGGCCATGGCTAACACTGTCCTTCCTGCAATGTTCTTGGTGGACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
||
| CDS-3UTR CAA 90 bp | GAACAGGGCGTGCCACCTTCAGGGTATCTCCAGAGAAGCTGTGTCCACCAAGAATTCTTCTTCCTGCACTaGTTGCAGGTGAACAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: EQGVPPSGYLQRSCVHQEFFFLH*LQVNRS Trigger: TGACCTGTTCACCTGCAACAAGTGCAGGAAGAAGAA...TTCTTGGTGGACACAGCTTCTCTGGAGATACCCTGAAGGTGGCACGCCCTGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
||
| CDS CCA 90 bp | ATCTCTCGGCATTTGTTTCGTACAGCATCACAGGTGATGGGCACTTaGGGAAATGTAGTGATCCTTGGAGTGGATGGGGTCCTAGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: ISRHLFRTASQVMGT*GNVVILGVDGVLGG Trigger: TCCACCTAGGACCCCATCCACTCCAAGGATCACTACATTTCCCCAAGTGCCCATCACCTGTGATGCTGTACGAAACAAATGCCGAGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
||
| CDS-3UTR CAA 90 bp | AAGAACATTGCAGGAAGGACAGTGTTAGCCATGGCCAGGGTTACGTCAGAAGGGAGCTTCTTCCAGGACTaGATGAGGGACTTGGCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: KNIAGRTVLAMARVTSEGSFFQD*MRDLAS Trigger: ACTTGCCAAGTCCCTCATCAAGTCCTGGAAGAAGCT...CCCTTCTGACGTAACCCTGGCCATGGCTAACACTGTCCTTCCTGCAATGTTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
||
| CDS-3UTR CAA 90 bp | TGCCACCTTCAGGGTATCTCCAGAGAAGCTGTGTCCACCAAGAACATTGCAGGAACAGGTGATGGGCACTaGGGGAAATGTAGTGATCCT | + |
|
Preference number: 5 (lower is better) Translates to: CHLQGISREAVSTKNIAGTGDGH*GKCSDP Trigger: AGGATCACTACATTTCCCCAAGTGCCCATCACCTGT...TCCTGCAATGTTCTTGGTGGACACAGCTTCTCTGGAGATACCCTGAAGGTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
||
| CDS TCA 72 bp | TCCCACGTCCAGGAAGATGCACTCCTCGATCTGAGATaGCAGATGCTCACAGTTCACACCAACGGCCACGTG | + |
|
Preference number: 6 (lower is better) Translates to: SHVQEDALLDLR*QMLTVHTNGHV Trigger: CACGTGGCCGTTGGTGTGAACTGTGAGCATCTGTCATCTCAGATCGAGGAGTGCATCTTCCTGGACGTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
||
| CDS CCA 72 bp | GGGCACTTGGGGAAATGTAGTGATCCTTGGAGTGGATaGGGTCCTAGGTGGATCTGGCTTCTTGCAGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: GHLGKCSDPWSG*GPRWIWLLAAE Trigger: CTCAGCTGCAAGAAGCCAGATCCACCTAGGACCCCATCCACTCCAAGGATCACTACATTTCCCCAAGTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
||
| CDS CCA 72 bp | GATGACAGATGCTCACAGTTCACACCAACGGCCACGTaGTCGTGGTCAGTTTGCAGGGCCAAAGTCAGCATC | + |
|
Preference number: 6 (lower is better) Translates to: DDRCSQFTPTAT*SWSVCRAKVSI Trigger: GATGCTGACTTTGGCCCTGCAAACTGACCACGACCACGTGGCCGTTGGTGTGAACTGTGAGCATCTGTCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
||
| CDS CAA 72 bp | GCACCACACAACACATTCCGCCGTAGACCAGGGTTCTaGGCATCTTTCAGGTTAGAGATTCGGCTCCGCACC | + |
|
Preference number: 6 (lower is better) Translates to: APHNTFRRRPGF*ASFRLEIRLRT Trigger: GGTGCGGAGCCGAATCTCTAACCTGAAAGATGCCAAGAACCCTGGTCTACGGCGGAATGTGTTGTGTGGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
||
| CDS CAA 90 bp | ATGAGGGACTTGGCAAGTGCAATGAGCTCCTCATCTGAACTCTGCTaGCGCAGAGCATTGACAGACATCCCAACACGGGTGGACTGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: MRDLASAMSSSSELC*RRALTDIPTRVDWS Trigger: GCTCCAGTCCACCCGTGTTGGGATGTCTGTCAATGCTCTGCGCAAGCAGAGTTCAGATGAGGAGCTCATTGCACTTGCCAAGTCCCTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
||
| CDS CAA 90 bp | CAGATGCTCACAGTTCACACCAACGGCCACGTGGTCGTGGTCAGTTaGCAGGGCCAAAGTCAGCATCTCTCGGCATTTGTTTCGTACAGC | + |
|
Preference number: 6 (lower is better) Translates to: QMLTVHTNGHVVVVS*QGQSQHLSAFVSYS Trigger: GCTGTACGAAACAAATGCCGAGAGATGCTGACTTTGGCCCTGCAAACTGACCACGACCACGTGGCCGTTGGTGTGAACTGTGAGCATCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
||
| CDS CAA 72 bp | ACAGTTCACACCAACGGCCACGTGGTCGTGGTCAGTTaGCAGGGCCAAAGTCAGCATCTCTCGGCATTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: TVHTNGHVVVVS*QGQSQHLSAFV Trigger: AACAAATGCCGAGAGATGCTGACTTTGGCCCTGCAAACTGACCACGACCACGTGGCCGTTGGTGTGAACTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
||
| CDS CAA 90 bp | GGTGTAATGGCACCACACAACACATTCCGCCGTAGACCAGGGTTCTaGGCATCTTTCAGGTTAGAGATTCGGCTCCGCACCCGATTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: GVMAPHNTFRRRPGF*ASFRLEIRLRTRFL Trigger: CAAGAATCGGGTGCGGAGCCGAATCTCTAACCTGAAAGATGCCAAGAACCCTGGTCTACGGCGGAATGTGTTGTGTGGTGCCATTACACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
||
| CDS GCA 72 bp | TCACTGGCCATCTCCTCTGATGTCATCACAGCTATCTaGTGGGGTGTAATGGCACCACACAACACATTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: SLAISSDVITAI*WGVMAPHNTFR Trigger: GCGGAATGTGTTGTGTGGTGCCATTACACCCCAGCAGATAGCTGTGATGACATCAGAGGAGATGGCCAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
||
| CDS CAA 72 bp | TTGGCAAGTGCAATGAGCTCCTCATCTGAACTCTGCTaGCGCAGAGCATTGACAGACATCCCAACACGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LASAMSSSSELC*RRALTDIPTRV Trigger: CACCCGTGTTGGGATGTCTGTCAATGCTCTGCGCAAGCAGAGTTCAGATGAGGAGCTCATTGCACTTGCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
||
| CDS CAA 90 bp | CATCTCTCGGCATTTGTTTCGTACAGCATCACAGGTGATGGGCACTaGGGGAAATGTAGTGATCCTTGGAGTGGATGGGGTCCTAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: HLSAFVSYSITGDGH*GKCSDPWSGWGPRW Trigger: CCACCTAGGACCCCATCCACTCCAAGGATCACTACATTTCCCCAAGTGCCCATCACCTGTGATGCTGTACGAAACAAATGCCGAGAGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
||
| CDS CAA 90 bp | TGGTCGTGGTCAGTTTGCAGGGCCAAAGTCAGCATCTCTCGGCATTaGTTTCGTACAGCATCACAGGTGATGGGCACTTGGGGAAATGTA | + |
|
Preference number: 6 (lower is better) Translates to: WSWSVCRAKVSISRH*FRTASQVMGTWGNV Trigger: TACATTTCCCCAAGTGCCCATCACCTGTGATGCTGTACGAAACAAATGCCGAGAGATGCTGACTTTGGCCCTGCAAACTGACCACGACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
||
| CDS CCA 72 bp | AAATGTAGTGATCCTTGGAGTGGATGGGGTCCTAGGTaGATCTGGCTTCTTGCAGCTGAGATCCGTAGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: KCSDPWSGWGPR*IWLLAAEIRSP Trigger: AGGACTACGGATCTCAGCTGCAAGAAGCCAGATCCACCTAGGACCCCATCCACTCCAAGGATCACTACATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
||
| CDS CAA 72 bp | TCAGTTTGCAGGGCCAAAGTCAGCATCTCTCGGCATTaGTTTCGTACAGCATCACAGGTGATGGGCACTTGG | + |
|
Preference number: 6 (lower is better) Translates to: SVCRAKVSISRH*FRTASQVMGTW Trigger: CCAAGTGCCCATCACCTGTGATGCTGTACGAAACAAATGCCGAGAGATGCTGACTTTGGCCCTGCAAACTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
||
| CDS CCA 72 bp | CGCAGAGCATTGACAGACATCCCAACACGGGTGGACTaGAGCAAGTGCAATGTAATAGGCATATTCTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RRALTDIPTRVD*SKCNVIGIFFS Trigger: GCTGAAGAATATGCCTATTACATTGCACTTGCTCCAGTCCACCCGTGTTGGGATGTCTGTCAATGCTCTGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
||
| CDS CCA 72 bp | CATTTGTTTCGTACAGCATCACAGGTGATGGGCACTTaGGGAAATGTAGTGATCCTTGGAGTGGATGGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: HLFRTASQVMGT*GNVVILGVDGV Trigger: GACCCCATCCACTCCAAGGATCACTACATTTCCCCAAGTGCCCATCACCTGTGATGCTGTACGAAACAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
||
| CDS CAA 72 bp | ACATCCAAGAGCTTCTTCCAGGACTTGATGAGGGACTaGGCAAGTGCAATGAGCTCCTCATCTGAACTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: TSKSFFQDLMRD*ASAMSSSSELC Trigger: GCAGAGTTCAGATGAGGAGCTCATTGCACTTGCCAAGTCCCTCATCAAGTCCTGGAAGAAGCTCTTGGATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
||
| CDS CAA 72 bp | GCATTTGTTTCGTACAGCATCACAGGTGATGGGCACTaGGGGAAATGTAGTGATCCTTGGAGTGGATGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: AFVSYSITGDGH*GKCSDPWSGWG Trigger: ACCCCATCCACTCCAAGGATCACTACATTTCCCCAAGTGCCCATCACCTGTGATGCTGTACGAAACAAATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
||
| CDS CAA 90 bp | TTCCTGGATTTGCCATCAGAAACATCCAAGAGCTTCTTCCAGGACTaGATGAGGGACTTGGCAAGTGCAATGAGCTCCTCATCTGAACTC | + |
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Preference number: 6 (lower is better) Translates to: FLDLPSETSKSFFQD*MRDLASAMSSSSEL Trigger: GAGTTCAGATGAGGAGCTCATTGCACTTGCCAAGTCCCTCATCAAGTCCTGGAAGAAGCTCTTGGATGTTTCTGATGGCAAATCCAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103042.10 ENSMUST00000129006.2 ENSMUST00000129745.8 |
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