Pregenerated sensors for TCEA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033813Ensembl transcript IDs: ENSMUST00000081551.14, ENSMUST00000165720.3
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CGGCAGACCAATCCTTTTAACATGGACATATTGTTTTCCATGTTATaGCAAACGGTCTACAAAGCAGAGCATAGAAGAGTGCAAAGCTTG | + |
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Preference number: 1 (lower is better) Translates to: RQTNPFNMDILFSML*QTVYKAEHRRVQSL Trigger: CAAGCTTTGCACTCTTCTATGCTCTGCTTTGTAGACCGTTTGTCATAACATGGAAAACAATATGTCCATGTTAAAAGGATTGGTCTGCCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081551.14 ENSMUST00000165720.3 |
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| 3UTR TCA 90 bp | GGCCTTTACTATATGCATTACAACATCTGTGTCAGGAAGACGATGTaGAAACCACTGCTTATTACTAGCAAAACAAGTGGGACACATTTA | + |
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Preference number: 1 (lower is better) Translates to: GLYYMHYNICVRKTM*KPLLITSKTSGTHL Trigger: TAAATGTGTCCCACTTGTTTTGCTAGTAATAAGCAGTGGTTTTCACATCGTCTTCCTGACACAGATGTTGTAATGCATATAGTAAAGGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081551.14 ENSMUST00000165720.3 |
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| 3UTR-3UTR TCA 90 bp | GACCAGGCTGGCCTCAAACTCAGAAATCCGCCTGCCTCTGCCTCCCGAGTTCTGAGACAGACTGTCAGGTaGACAACAAAGACCAACCCA | + |
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Preference number: 2 (lower is better) Translates to: DQAGLKLRNPPASASRVLRQTVR*TTKTNP Trigger: TGGGTTGGTCTTTGTTGTTCACCTGACAGTCTGTCT...CAGAACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTTGAGGCCAGCCTGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081551.14 ENSMUST00000165720.3 |
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| 3UTR-3UTR CCA 90 bp | GACCAGGCTGGCCTCAAACTCAGAAATCCGCCTGCCTCTGCCTCCCGAGTTCTGCTGGCCACATACTATTaGAATACACACTACATTTGG | + |
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Preference number: 2 (lower is better) Translates to: DQAGLKLRNPPASASRVLLATYY*NTHYIW Trigger: CCAAATGTAGTGTGTATTCCAATAGTATGTGGCCAG...CAGAACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTTGAGGCCAGCCTGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081551.14 ENSMUST00000165720.3 |
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| 3UTR-3UTR TCA 90 bp | GACCAGGCTGGCCTCAAACTCAGAAATCCGCCTGCCTCTGCCTCCCGAGTTCTGACAAAGACCAACCCATaGGATGTATGTTGTTTACAA | + |
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Preference number: 2 (lower is better) Translates to: DQAGLKLRNPPASASRVLTKTNP*DVCCLQ Trigger: TTGTAAACAACATACATCTCATGGGTTGGTCTTTGT...CAGAACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTTGAGGCCAGCCTGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081551.14 ENSMUST00000165720.3 |
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| 3UTR-3UTR GCA 90 bp | GTTCTCAGGCTTAATCCTTGGTCAGTAGGTTTCCAAGTGCAAGTACAGTCATGCGTGGTTAGTCACAGATaGAAGAGATCCAAGGATCCG | + |
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Preference number: 2 (lower is better) Translates to: VLRLNPWSVGFQVQVQSCVVSHR*KRSKDP Trigger: CGGATCCTTGGATCTCTTGCATCTGTGACTAACCAC...GCATGACTGTACTTGCACTTGGAAACCTACTGACCAAGGATTAAGCCTGAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081551.14 ENSMUST00000165720.3 |
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| 3UTR-3UTR TCA 90 bp | TACAAAGCAGAGCATAGAAGAGTGCAAAGCTTGTGCAACGGTTTTTACACAGGAAGACAGACTGTCAGGTaGACAACAAAGACCAACCCA | + |
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Preference number: 2 (lower is better) Translates to: YKAEHRRVQSLCNGFYTGRQTVR*TTKTNP Trigger: TGGGTTGGTCTTTGTTGTTCACCTGACAGTCTGTCT...TCCTGTGTAAAAACCGTTGCACAAGCTTTGCACTCTTCTATGCTCTGCTTTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081551.14 ENSMUST00000165720.3 |
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| 3UTR-3UTR CCA 90 bp | AAGCAGAGCATAGAAGAGTGCAAAGCTTGTGCAACGGTTTTTACACAGGAGTCTCTCAGGCTTAATCCTTaGTCAGTAGGTTTCCAAGTG | + |
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Preference number: 2 (lower is better) Translates to: KQSIEECKACATVFTQESLRLNP*SVGFQV Trigger: CACTTGGAAACCTACTGACCAAGGATTAAGCCTGAG...AGACTCCTGTGTAAAAACCGTTGCACAAGCTTTGCACTCTTCTATGCTCTGCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081551.14 ENSMUST00000165720.3 |
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| 3UTR-3UTR TCA 90 bp | GTCACAGATGCAAGAGATCCAAGGATCCGAGGCTTTGTGAGCACAGTAATTAAGACAAAGACCAACCCATaGGATGTATGTTGTTTACAA | + |
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Preference number: 2 (lower is better) Translates to: VTDARDPRIRGFVSTVIKTKTNP*DVCCLQ Trigger: TTGTAAACAACATACATCTCATGGGTTGGTCTTTGT...CTTAATTACTGTGCTCACAAAGCCTCGGATCCTTGGATCTCTTGCATCTGTGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081551.14 ENSMUST00000165720.3 |
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| 3UTR-3UTR CCA 90 bp | AAGCAGAGCATAGAAGAGTGCAAAGCTTGTGCAACGGTTTTTACACAGGAGTCTCTGGCCACATACTATTaGAATACACACTACATTTGG | + |
|
Preference number: 2 (lower is better) Translates to: KQSIEECKACATVFTQESLATYY*NTHYIW Trigger: CCAAATGTAGTGTGTATTCCAATAGTATGTGGCCAG...AGACTCCTGTGTAAAAACCGTTGCACAAGCTTTGCACTCTTCTATGCTCTGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081551.14 ENSMUST00000165720.3 |
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| 3UTR-3UTR CCA 90 bp | CAGAGCATAGAAGAGTGCAAAGCTTGTGCAACGGTTTTTACACAGGAGTCTGAAAGCATGTCTTCCTATTaGGGACAATTCATCAGAAGT | + |
|
Preference number: 2 (lower is better) Translates to: QSIEECKACATVFTQESESMSSY*GQFIRS Trigger: ACTTCTGATGAATTGTCCCCAATAGGAAGACATGCT...TTCAGACTCCTGTGTAAAAACCGTTGCACAAGCTTTGCACTCTTCTATGCTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081551.14 ENSMUST00000165720.3 |
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| 3UTR-3UTR CCA 90 bp | AAGCAGAGCATAGAAGAGTGCAAAGCTTGTGCAACGGTTTTTACACAGGAGTCTAGCATGTCTTCCTATTaGGGACAATTCATCAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: KQSIEECKACATVFTQESSMSSY*GQFIRS Trigger: ACTTCTGATGAATTGTCCCCAATAGGAAGACATGCT...AGACTCCTGTGTAAAAACCGTTGCACAAGCTTTGCACTCTTCTATGCTCTGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081551.14 ENSMUST00000165720.3 |
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| 3UTR-3UTR GCA 90 bp | ACAAAGCAGAGCATAGAAGAGTGCAAAGCTTGTGCAACGGTTTTTACACAGGAGTTTACAAATTTCACTTaGAAGGAAACGAGTTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: TKQSIEECKACATVFTQEFTNFT*KETSCL Trigger: CAGGCAACTCGTTTCCTTGCAAGTGAAATTTGTAAA...CTCCTGTGTAAAAACCGTTGCACAAGCTTTGCACTCTTCTATGCTCTGCTTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081551.14 ENSMUST00000165720.3 |
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| 3UTR-3UTR GCA 90 bp | CAGAGCATAGAAGAGTGCAAAGCTTGTGCAACGGTTTTTACACAGGAGTCTGAACGATGTGAAAACCACTaGTTATTACTAGCAAAACAA | + |
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Preference number: 2 (lower is better) Translates to: QSIEECKACATVFTQESERCENH*LLLAKQ Trigger: TTGTTTTGCTAGTAATAAGCAGTGGTTTTCACATCG...TTCAGACTCCTGTGTAAAAACCGTTGCACAAGCTTTGCACTCTTCTATGCTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000081551.14 ENSMUST00000165720.3 |
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| 3UTR-3UTR GCA 90 bp | GATCCAAGGATCCGAGGCTTTGTGAGCACAGTAATTAAGAGTAAAGTAATATGCTTTACAAATTTCACTTaGAAGGAAACGAGTTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: DPRIRGFVSTVIKSKVICFTNFT*KETSCL Trigger: CAGGCAACTCGTTTCCTTGCAAGTGAAATTTGTAAA...GCATATTACTTTACTCTTAATTACTGTGCTCACAAAGCCTCGGATCCTTGGATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081551.14 ENSMUST00000165720.3 |
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| 3UTR GCA 72 bp | CCAGGCTGGCCTCAAACTCAGAAATCCGCCTGCCTCTaGCTCCCGAGTTCTGGGATTAAAGGTGTGGGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: PGWPQTQKSACL*LPSSGIKGVGH Trigger: GTGGCCCACACCTTTAATCCCAGAACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTTGAGGCCAGCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081551.14 ENSMUST00000165720.3 |
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| 3UTR GCA 72 bp | TGTAGACCAGGCTGGCCTCAAACTCAGAAATCCGCCTaGCTCTGCCTCCCGAGTTCTGGGATTAAAGGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: CRPGWPQTQKSA*LCLPSSGIKGV Trigger: CACACCTTTAATCCCAGAACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081551.14 ENSMUST00000165720.3 |
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| 3UTR-3UTR CAA 90 bp | GACCAGGCTGGCCTCAAACTCAGAAATCCGCCTGCCTCTGCCTCCCGAGTTCTGGTTTACAAATTTCACTaGCAAGGAAACGAGTTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: DQAGLKLRNPPASASRVLVYKFH*QGNELP Trigger: AGGCAACTCGTTTCCTTGCAAGTGAAATTTGTAAAC...CAGAACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTTGAGGCCAGCCTGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081551.14 ENSMUST00000165720.3 |
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| 3UTR CCA 72 bp | TGGGCCACCACGCCCGGCAGACCAATCCTTTTAACATaGACATATTGTTTTCCATGTTATGACAAACGGTCT | + |
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Preference number: 3 (lower is better) Translates to: WATTPGRPILLT*TYCFPCYDKRS Trigger: AGACCGTTTGTCATAACATGGAAAACAATATGTCCATGTTAAAAGGATTGGTCTGCCGGGCGTGGTGGCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081551.14 ENSMUST00000165720.3 |
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| 3UTR-3UTR CAA 90 bp | AAGCAGAGCATAGAAGAGTGCAAAGCTTGTGCAACGGTTTTTACACAGGAGTCTGCTGGCCACATACTATaGGAATACACACTACATTTG | + |
|
Preference number: 3 (lower is better) Translates to: KQSIEECKACATVFTQESAGHIL*EYTLHL Trigger: CAAATGTAGTGTGTATTCCAATAGTATGTGGCCAGC...AGACTCCTGTGTAAAAACCGTTGCACAAGCTTTGCACTCTTCTATGCTCTGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081551.14 ENSMUST00000165720.3 |
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| 3UTR GCA 72 bp | GAAATAAAAGAAATGATCACTGTGGTTAGTCACAGATaGAAGAGATCCAAGGATCCGAGGCTTTGTGAGCAC | + |
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Preference number: 3 (lower is better) Translates to: EIKEMITVVSHR*KRSKDPRLCEH Trigger: GTGCTCACAAAGCCTCGGATCCTTGGATCTCTTGCATCTGTGACTAACCACAGTGATCATTTCTTTTATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081551.14 ENSMUST00000165720.3 |
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| 3UTR GCA 72 bp | TATGACAAACGGTCTACAAAGCAGAGCATAGAAGAGTaGAAAGCTTGTGCAACGGTTTTTACACAGGAGTCT | + |
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Preference number: 3 (lower is better) Translates to: YDKRSTKQSIEE*KACATVFTQES Trigger: AGACTCCTGTGTAAAAACCGTTGCACAAGCTTTGCACTCTTCTATGCTCTGCTTTGTAGACCGTTTGTCATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081551.14 ENSMUST00000165720.3 |
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| 3UTR-3UTR CAA 90 bp | ACAAAGCAGAGCATAGAAGAGTGCAAAGCTTGTGCAACGGTTTTTACACAGGAGTTGCAAGGAAACGAGTaGCCTGGCTTAATTTTAAAG | + |
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Preference number: 3 (lower is better) Translates to: TKQSIEECKACATVFTQELQGNE*PGLILK Trigger: CTTTAAAATTAAGCCAGGCAACTCGTTTCCTTGCAA...CTCCTGTGTAAAAACCGTTGCACAAGCTTTGCACTCTTCTATGCTCTGCTTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081551.14 ENSMUST00000165720.3 |
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| 3UTR-3UTR CAA 90 bp | AAGCAGAGCATAGAAGAGTGCAAAGCTTGTGCAACGGTTTTTACACAGGAGTCTTTGCAAGGAAACGAGTaGCCTGGCTTAATTTTAAAG | + |
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Preference number: 3 (lower is better) Translates to: KQSIEECKACATVFTQESLQGNE*PGLILK Trigger: CTTTAAAATTAAGCCAGGCAACTCGTTTCCTTGCAA...AGACTCCTGTGTAAAAACCGTTGCACAAGCTTTGCACTCTTCTATGCTCTGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081551.14 ENSMUST00000165720.3 |
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| 3UTR-3UTR CAA 90 bp | TACAAAGCAGAGCATAGAAGAGTGCAAAGCTTGTGCAACGGTTTTTACACAGGAGTTTACAAATTTCACTaGCAAGGAAACGAGTTGCCT | + |
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Preference number: 3 (lower is better) Translates to: YKAEHRRVQSLCNGFYTGVYKFH*QGNELP Trigger: AGGCAACTCGTTTCCTTGCAAGTGAAATTTGTAAAC...TCCTGTGTAAAAACCGTTGCACAAGCTTTGCACTCTTCTATGCTCTGCTTTGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081551.14 ENSMUST00000165720.3 |
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| 3UTR-3UTR CAA 90 bp | CAGAGCATAGAAGAGTGCAAAGCTTGTGCAACGGTTTTTACACAGGAGTCTGAATACATTTCAGCTGGCTaGACATCATCATGTAAGAAA | + |
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Preference number: 3 (lower is better) Translates to: QSIEECKACATVFTQESEYISAG*TSSCKK Trigger: TTTCTTACATGATGATGTCAAGCCAGCTGAAATGTA...TTCAGACTCCTGTGTAAAAACCGTTGCACAAGCTTTGCACTCTTCTATGCTCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081551.14 ENSMUST00000165720.3 |
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| 3UTR TCA 72 bp | TATATGCATTACAACATCTGTGTCAGGAAGACGATGTaGAAACCACTGCTTATTACTAGCAAAACAAGTGGG | + |
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Preference number: 3 (lower is better) Translates to: YMHYNICVRKTM*KPLLITSKTSG Trigger: CCCACTTGTTTTGCTAGTAATAAGCAGTGGTTTTCACATCGTCTTCCTGACACAGATGTTGTAATGCATATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081551.14 ENSMUST00000165720.3 |
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| 3UTR TCA 72 bp | AATCCTTTTAACATGGACATATTGTTTTCCATGTTATaGCAAACGGTCTACAAAGCAGAGCATAGAAGAGTG | + |
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Preference number: 3 (lower is better) Translates to: NPFNMDILFSML*QTVYKAEHRRV Trigger: CACTCTTCTATGCTCTGCTTTGTAGACCGTTTGTCATAACATGGAAAACAATATGTCCATGTTAAAAGGATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081551.14 ENSMUST00000165720.3 |
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| CDS-3UTR GCA 90 bp | GTTCTCAGGCTTAATCCTTGGTCAGTAGGTTTCCAAGTGCAAGTACAGTCATGCAATGCGCCAGCCTGCTaGGTCTGGAAGAAGAGATTC | + |
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Preference number: 4 (lower is better) Translates to: VLRLNPWSVGFQVQVQSCNAPAC*VWKKRF Trigger: GAATCTCTTCTTCCAGACGCAGCAGGCTGGCGCATT...GCATGACTGTACTTGCACTTGGAAACCTACTGACCAAGGATTAAGCCTGAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165720.3 |
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| CDS-3UTR GCA 90 bp | GTTCTCAGGCTTAATCCTTGGTCAGTAGGTTTCCAAGTGCAAGTACAGTCATGCTTTCAGCAAATCCAATaGGCCAGCCTGCTGCGTCTG | + |
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Preference number: 4 (lower is better) Translates to: VLRLNPWSVGFQVQVQSCFQQIQ*ASLLRL Trigger: CAGACGCAGCAGGCTGGCGCATTGGATTTGCTGAAA...GCATGACTGTACTTGCACTTGGAAACCTACTGACCAAGGATTAAGCCTGAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165720.3 |
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| CDS-3UTR TCA 90 bp | GTCACAGATGCAAGAGATCCAAGGATCCGAGGCTTTGTGAGCACAGTAATTAAGAAGAAGAGATTCAAGTaGAGCTGGCTGGAGAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: VTDARDPRIRGFVSTVIKKKRFK*SWLERS Trigger: TGACCTCTCCAGCCAGCTTCACTTGAATCTCTTCTT...CTTAATTACTGTGCTCACAAAGCCTCGGATCCTTGGATCTCTTGCATCTGTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165720.3 |
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| CDS-3UTR TCA 90 bp | AAGCAGAGCATAGAAGAGTGCAAAGCTTGTGCAACGGTTTTTACACAGGAGTCTGCTTGCGAAGGGCATTaGCAGACATTCCAATTCTTG | + |
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Preference number: 4 (lower is better) Translates to: KQSIEECKACATVFTQESACEGH*QTFQFL Trigger: CAAGAATTGGAATGTCTGTCAATGCCCTTCGCAAGC...AGACTCCTGTGTAAAAACCGTTGCACAAGCTTTGCACTCTTCTATGCTCTGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081551.14 ENSMUST00000165720.3 |
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| CDS-3UTR CCA 90 bp | AAGCAGAGCATAGAAGAGTGCAAAGCTTGTGCAACGGTTTTTACACAGGAGTCTTGGAGAGGTCAAGTGTaGAAGCAAAGGGATGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: KQSIEECKACATVFTQESWRGQV*KQRDGK Trigger: CTTTCCATCCCTTTGCTTCCACACTTGACCTCTCCA...AGACTCCTGTGTAAAAACCGTTGCACAAGCTTTGCACTCTTCTATGCTCTGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165720.3 |
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| CDS-3UTR CCA 90 bp | TACAAAGCAGAGCATAGAAGAGTGCAAAGCTTGTGCAACGGTTTTTACACAGGATCAAGTGAAGCTGGCTaGAGAGGTCAAGTGTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: YKAEHRRVQSLCNGFYTGSSEAG*RGQVWK Trigger: CTTCCACACTTGACCTCTCCAGCCAGCTTCACTTGA...TCCTGTGTAAAAACCGTTGCACAAGCTTTGCACTCTTCTATGCTCTGCTTTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165720.3 |
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| CDS-3UTR CCA 90 bp | GATCCAAGGATCCGAGGCTTTGTGAGCACAGTAATTAAGAGTAAAGTAATATGCGTGGAAGCAAAGGGATaGAAAGTGGTACACACCGAG | + |
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Preference number: 4 (lower is better) Translates to: DPRIRGFVSTVIKSKVICVEAKG*KVVHTE Trigger: CTCGGTGTGTACCACTTTCCATCCCTTTGCTTCCAC...GCATATTACTTTACTCTTAATTACTGTGCTCACAAAGCCTCGGATCCTTGGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165720.3 |
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| CDS-3UTR TCA 90 bp | CAGAGCATAGAAGAGTGCAAAGCTTGTGCAACGGTTTTTACACAGGAGTCTGAAATAGCTTCCTCAATCTaGGATCCCAGTTCTTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: QSIEECKACATVFTQESEIASSI*DPSSSS Trigger: TGAAGAAGAACTGGGATCTCAGATTGAGGAAGCTAT...TTCAGACTCCTGTGTAAAAACCGTTGCACAAGCTTTGCACTCTTCTATGCTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081551.14 ENSMUST00000165720.3 |
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| CDS-3UTR GCA 90 bp | ACAAAGCAGAGCATAGAAGAGTGCAAAGCTTGTGCAACGGTTTTTACACAGGAGTTTCAGCAAATCCAATaGGCCAGCCGCATTCTTTTT | + |
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Preference number: 4 (lower is better) Translates to: TKQSIEECKACATVFTQEFQQIQ*ASRILF Trigger: AAAAAGAATGCGGCTGGCGCATTGGATTTGCTGAAA...CTCCTGTGTAAAAACCGTTGCACAAGCTTTGCACTCTTCTATGCTCTGCTTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081551.14 |
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| CDS-3UTR GCA 90 bp | GTCACAGATGCAAGAGATCCAAGGATCCGAGGCTTTGTGAGCACAGTAATTAAGTTCTGCTGCTTACATTaGTGCTGGAACTACTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: VTDARDPRIRGFVSTVIKFCCLH*CWNYFL Trigger: AAGAAAGTAGTTCCAGCAGCAATGTAAGCAGCAGAA...CTTAATTACTGTGCTCACAAAGCCTCGGATCCTTGGATCTCTTGCATCTGTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081551.14 ENSMUST00000165720.3 |
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| CDS-3UTR TCA 90 bp | TACAAAGCAGAGCATAGAAGAGTGCAAAGCTTGTGCAACGGTTTTTACACAGGAATAGCTTCCTCAATCTaGGATCCCAGTTCTTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: YKAEHRRVQSLCNGFYTGIASSI*DPSSSS Trigger: TGAAGAAGAACTGGGATCTCAGATTGAGGAAGCTAT...TCCTGTGTAAAAACCGTTGCACAAGCTTTGCACTCTTCTATGCTCTGCTTTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081551.14 ENSMUST00000165720.3 |
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| CDS-3UTR GCA 90 bp | CAGAGCATAGAAGAGTGCAAAGCTTGTGCAACGGTTTTTACACAGGAGTCTGAATTCTGCTGCTTACATTaGTGCTGGAACTACTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: QSIEECKACATVFTQESEFCCLH*CWNYFL Trigger: AAGAAAGTAGTTCCAGCAGCAATGTAAGCAGCAGAA...TTCAGACTCCTGTGTAAAAACCGTTGCACAAGCTTTGCACTCTTCTATGCTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081551.14 ENSMUST00000165720.3 |
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| CDS-3UTR GCA 90 bp | AAGCAGAGCATAGAAGAGTGCAAAGCTTGTGCAACGGTTTTTACACAGGAGTCTTTCATCAGCTCCAATTaGAACATAATCATCTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: KQSIEECKACATVFTQESFISSN*NIIISC Trigger: ACAGGAGATGATTATGTTGCAATTGGAGCTGATGAA...AGACTCCTGTGTAAAAACCGTTGCACAAGCTTTGCACTCTTCTATGCTCTGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081551.14 ENSMUST00000165720.3 |
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| CDS-3UTR CCA 90 bp | TACAAAGCAGAGCATAGAAGAGTGCAAAGCTTGTGCAACGGTTTTTACACAGGAACATTCCAATTCTTGTaGACTGTAGCAATTCTAGGG | + |
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Preference number: 4 (lower is better) Translates to: YKAEHRRVQSLCNGFYTGTFQFL*TVAILG Trigger: CCCTAGAATTGCTACAGTCCACAAGAATTGGAATGT...TCCTGTGTAAAAACCGTTGCACAAGCTTTGCACTCTTCTATGCTCTGCTTTGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081551.14 ENSMUST00000165720.3 |
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| CDS-3UTR GCA 90 bp | TACAAAGCAGAGCATAGAAGAGTGCAAAGCTTGTGCAACGGTTTTTACACAGGATTCATCAGCTCCAATTaGAACATAATCATCTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: YKAEHRRVQSLCNGFYTGFISSN*NIIISC Trigger: ACAGGAGATGATTATGTTGCAATTGGAGCTGATGAA...TCCTGTGTAAAAACCGTTGCACAAGCTTTGCACTCTTCTATGCTCTGCTTTGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081551.14 ENSMUST00000165720.3 |
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| 3UTR CAA 72 bp | CCAACCCATGAGATGTATGTTGTTTACAAATTTCACTaGCAAGGAAACGAGTTGCCTGGCTTAATTTTAAAG | + |
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Preference number: 4 (lower is better) Translates to: PTHEMYVVYKFH*QGNELPGLILK Trigger: CTTTAAAATTAAGCCAGGCAACTCGTTTCCTTGCAAGTGAAATTTGTAAACAACATACATCTCATGGGTTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081551.14 ENSMUST00000165720.3 |
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| CDS-3UTR CAA 90 bp | GACCAGGCTGGCCTCAAACTCAGAAATCCGCCTGCCTCTGCCTCCCGAGTTCTGTGCTTGCGAAGGGCATaGACAGACATTCCAATTCTT | + |
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Preference number: 5 (lower is better) Translates to: DQAGLKLRNPPASASRVLCLRRA*TDIPIL Trigger: AAGAATTGGAATGTCTGTCAATGCCCTTCGCAAGCA...CAGAACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTTGAGGCCAGCCTGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081551.14 ENSMUST00000165720.3 |
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| CDS CCA 90 bp | CGCCAGCCTGCTGCGTCTGGAAGAAGAGATTCAAGTGAAGCTGGCTaGAGAGGTCAAGTGTGGAAGCAAAGGGATGGAAAGTGGTACACA | + |
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Preference number: 5 (lower is better) Translates to: RQPAASGRRDSSEAG*RGQVWKQRDGKWYT Trigger: TGTGTACCACTTTCCATCCCTTTGCTTCCACACTTGACCTCTCCAGCCAGCTTCACTTGAATCTCTTCTTCCAGACGCAGCAGGCTGGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165720.3 |
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| CDS TCA 90 bp | AAATCCAATGCGCCAGCCTGCTGCGTCTGGAAGAAGAGATTCAAGTaGAGCTGGCTGGAGAGGTCAAGTGTGGAAGCAAAGGGATGGAAA | + |
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Preference number: 5 (lower is better) Translates to: KSNAPACCVWKKRFK*SWLERSSVEAKGWK Trigger: TTTCCATCCCTTTGCTTCCACACTTGACCTCTCCAGCCAGCTTCACTTGAATCTCTTCTTCCAGACGCAGCAGGCTGGCGCATTGGATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165720.3 |
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| CDS-3UTR CAA 90 bp | GACCAGGCTGGCCTCAAACTCAGAAATCCGCCTGCCTCTGCCTCCCGAGTTCTGCAGGGTCTTTATCAGTaGATGGTCCATCTAATAATT | + |
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Preference number: 5 (lower is better) Translates to: DQAGLKLRNPPASASRVLQGLYQ*MVHLII Trigger: AATTATTAGATGGACCATCAACTGATAAAGACCCTG...CAGAACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTTGAGGCCAGCCTGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081551.14 ENSMUST00000165720.3 |
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| CDS-3UTR CAA 90 bp | TACAAAGCAGAGCATAGAAGAGTGCAAAGCTTGTGCAACGGTTTTTACACAGGAATCAGCACTACGAGTTaGCACCTGTGTATAAGTGCA | + |
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Preference number: 5 (lower is better) Translates to: YKAEHRRVQSLCNGFYTGISTTS*HLCISA Trigger: TGCACTTATACACAGGTGCAAACTCGTAGTGCTGAT...TCCTGTGTAAAAACCGTTGCACAAGCTTTGCACTCTTCTATGCTCTGCTTTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081551.14 ENSMUST00000165720.3 |
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| CDS-3UTR CAA 90 bp | GATCCAAGGATCCGAGGCTTTGTGAGCACAGTAATTAAGAGTAAAGTAATATGCTGCTTGCGAAGGGCATaGACAGACATTCCAATTCTT | + |
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Preference number: 5 (lower is better) Translates to: DPRIRGFVSTVIKSKVICCLRRA*TDIPIL Trigger: AAGAATTGGAATGTCTGTCAATGCCCTTCGCAAGCA...GCATATTACTTTACTCTTAATTACTGTGCTCACAAAGCCTCGGATCCTTGGATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081551.14 ENSMUST00000165720.3 |
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| CDS-3UTR CAA 90 bp | GATCCAAGGATCCGAGGCTTTGTGAGCACAGTAATTAAGAGTAAAGTAATATGCCAGGGTCTTTATCAGTaGATGGTCCATCTAATAATT | + |
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Preference number: 5 (lower is better) Translates to: DPRIRGFVSTVIKSKVICQGLYQ*MVHLII Trigger: AATTATTAGATGGACCATCAACTGATAAAGACCCTG...GCATATTACTTTACTCTTAATTACTGTGCTCACAAAGCCTCGGATCCTTGGATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081551.14 ENSMUST00000165720.3 |
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| CDS TCA 72 bp | GCGCCAGCCTGCTGCGTCTGGAAGAAGAGATTCAAGTaGAGCTGGCTGGAGAGGTCAAGTGTGGAAGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: APACCVWKKRFK*SWLERSSVEAK Trigger: CTTTGCTTCCACACTTGACCTCTCCAGCCAGCTTCACTTGAATCTCTTCTTCCAGACGCAGCAGGCTGGCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165720.3 |
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| CDS CCA 72 bp | AGAGATTCAAGTGAAGCTGGCTGGAGAGGTCAAGTGTaGAAGCAAAGGGATGGAAAGTGGTACACACCGAGG | + |
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Preference number: 6 (lower is better) Translates to: RDSSEAGWRGQV*KQRDGKWYTPR Trigger: CCTCGGTGTGTACCACTTTCCATCCCTTTGCTTCCACACTTGACCTCTCCAGCCAGCTTCACTTGAATCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165720.3 |
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| CDS CCA 72 bp | GCTGCGTCTGGAAGAAGAGATTCAAGTGAAGCTGGCTaGAGAGGTCAAGTGTGGAAGCAAAGGGATGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: AASGRRDSSEAG*RGQVWKQRDGK Trigger: CTTTCCATCCCTTTGCTTCCACACTTGACCTCTCCAGCCAGCTTCACTTGAATCTCTTCTTCCAGACGCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165720.3 |
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