Pregenerated sensors for TCAM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020712Ensembl transcript IDs: ENSMUST00000044462.4, ENSMUST00000142472.8
Found 172 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGCCCGTGAAACCCTGCTTTGGGGGACAACGGAATGCAAGGAAGTaGAGCCTCACATTGTCTCCGCCTTCCTCCTTGGCCCGCTCTTGC | + |
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Preference number: 1 (lower is better) Translates to: GPVKPCFGGQRNARK*SLTLSPPSSLARSC Trigger: GCAAGAGCGGGCCAAGGAGGAAGGCGGAGACAATGTGAGGCTTCACTTCCTTGCATTCCGTTGTCCCCCAAAGCAGGGTTTCACGGGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| 3UTR GCA 90 bp | CCAGCCACAGGGGCCCGTGAAACCCTGCTTTGGGGGACAACGGAATaGAAGGAAGTGAAGCCTCACATTGTCTCCGCCTTCCTCCTTGGC | + |
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Preference number: 1 (lower is better) Translates to: PATGARETLLWGTTE*KEVKPHIVSAFLLG Trigger: GCCAAGGAGGAAGGCGGAGACAATGTGAGGCTTCACTTCCTTGCATTCCGTTGTCCCCCAAAGCAGGGTTTCACGGGCCCCTGTGGCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| 3UTR CCA 90 bp | CAGACGGACTGGCTGCCAGCCACAGGGGCCCGTGAAACCCTGCTTTaGGGGACAACGGAATGCAAGGAAGTGAAGCCTCACATTGTCTCC | + |
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Preference number: 1 (lower is better) Translates to: QTDWLPATGARETLL*GTTECKEVKPHIVS Trigger: GGAGACAATGTGAGGCTTCACTTCCTTGCATTCCGTTGTCCCCCAAAGCAGGGTTTCACGGGCCCCTGTGGCTGGCAGCCAGTCCGTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| 3UTR TCA 90 bp | GATCCCATTAAGATGGCTGTGAGCCACCACGTGGTTGTTGAGAACTaGGCTCAGTCAGTGCTCTTTACCTCTGCACCATCTCTCCAGCCC | + |
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Preference number: 1 (lower is better) Translates to: DPIKMAVSHHVVVEN*AQSVLFTSAPSLQP Trigger: GGGCTGGAGAGATGGTGCAGAGGTAAAGAGCACTGACTGAGCTCAGTTCTCAACAACCACGTGGTGGCTCACAGCCATCTTAATGGGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044462.4 |
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| 3UTR CCA 90 bp | CATCCCATTCCAGACACACACCAAAACCGGAGTTGGATTTCCCTCTaGGATGCAGGCAAGCATCTGATGCATCCCTTCTACCCATATCTG | + |
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Preference number: 1 (lower is better) Translates to: HPIPDTHQNRSWISL*DAGKHLMHPFYPYL Trigger: CAGATATGGGTAGAAGGGATGCATCAGATGCTTGCCTGCATCCCAGAGGGAAATCCAACTCCGGTTTTGGTGTGTGTCTGGAATGGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142472.8 |
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| 3UTR TCA 90 bp | GTCAGTGCTCTTTACCTCTGCACCATCTCTCCAGCCCCCAAAGGATaGTTTTTACACCAAATCCTTAACCTCAGATTCAGGATAGTCCAG | + |
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Preference number: 1 (lower is better) Translates to: VSALYLCTISPAPKG*FLHQILNLRFRIVQ Trigger: CTGGACTATCCTGAATCTGAGGTTAAGGATTTGGTGTAAAAATCATCCTTTGGGGGCTGGAGAGATGGTGCAGAGGTAAAGAGCACTGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000044462.4 |
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| 3UTR CCA 90 bp | GGATCCCTCACCAGATGGAACAATCAGACTGAAACGTCTACAAACTaGAATAAACTCAAAAGAGAAATGAGCTCCAGACGGACTGGCTGC | + |
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Preference number: 1 (lower is better) Translates to: GSLTRWNNQTETSTN*NKLKREMSSRRTGC Trigger: GCAGCCAGTCCGTCTGGAGCTCATTTCTCTTTTGAGTTTATTCCAGTTTGTAGACGTTTCAGTCTGATTGTTCCATCTGGTGAGGGATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| 3UTR CCA 90 bp | GACCTAGTTAAATACAGGGTAGGAATGAGAGGATCCCTCACCAGATaGAACAATCAGACTGAAACGTCTACAAACTGGAATAAACTCAAA | + |
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Preference number: 1 (lower is better) Translates to: DLVKYRVGMRGSLTR*NNQTETSTNWNKLK Trigger: TTTGAGTTTATTCCAGTTTGTAGACGTTTCAGTCTGATTGTTCCATCTGGTGAGGGATCCTCTCATTCCTACCCTGTATTTAACTAGGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| 3UTR-3UTR GCA 90 bp | CTGAGCTCAGTCAGTGCTCTTTACCTCTGCACCATCTCTCCAGCCCCCAAAGGATCCAGACGGACTGGCTaGCAGCCACAGGGGCCCGTG | + |
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Preference number: 2 (lower is better) Translates to: LSSVSALYLCTISPAPKGSRRTG*QPQGPV Trigger: CACGGGCCCCTGTGGCTGGCAGCCAGTCCGTCTGGA...TCCTTTGGGGGCTGGAGAGATGGTGCAGAGGTAAAGAGCACTGACTGAGCTCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044462.4 |
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| 3UTR-3UTR CCA 90 bp | GATAATGAAGATGGTGGAGGAGCTGATGCCCTCAGGCAGGCCTTGGACAATGATGAGCTCCAGACGGACTaGCTGCCAGCCACAGGGGCC | + |
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Preference number: 2 (lower is better) Translates to: DNEDGGGADALRQALDNDELQTD*LPATGA Trigger: GGCCCCTGTGGCTGGCAGCCAGTCCGTCTGGAGCTC...ATCATTGTCCAAGGCCTGCCTGAGGGCATCAGCTCCTCCACCATCTTCATTATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142472.8 |
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| 3UTR-3UTR GCA 90 bp | ATGAGAGGCCAGGCCAGAGCCTTCTGTGTGCCTGAGAGTGACCTAGTTAAATACGACTCTCCTCGCCCTTaGTTTGCTCCCGCGGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: MRGQARAFCVPESDLVKYDSPRP*FAPAAC Trigger: ACAGGCCGCGGGAGCAAAGCAAGGGCGAGGAGAGTC...GTATTTAACTAGGTCACTCTCAGGCACACAGAAGGCTCTGGCCTGGCCTCTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142472.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGCATCCTTCGTGATGTCAACGGGCACCGTTTGGGGAGCAGGGGAGTACGGTTTGCTGTTTGAGAGGTaGGCAGTGGAAATGAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: PASFVMSTGTVWGAGEYGLLFER*AVEMRG Trigger: GCCTCTCATTTCCACTGCCCACCTCTCAAACAGCAA...ACCGTACTCCCCTGCTCCCCAAACGGTGCCCGTTGACATCACGAAGGATGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| 3UTR-3UTR TCA 90 bp | CCAGCATCCTTCGTGATGTCAACGGGCACCGTTTGGGGAGCAGGGGAGTACGGTGTAAATGCTGGTAGCTaGAGTCACACTCCAGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: PASFVMSTGTVWGAGEYGVNAGS*SHTPAK Trigger: CTTTGCTGGAGTGTGACTTCAGCTACCAGCATTTAC...ACCGTACTCCCCTGCTCCCCAAACGGTGCCCGTTGACATCACGAAGGATGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| 3UTR-3UTR TCA 90 bp | GTGAGCCAGTCACAGAGAATTCCGGTGACAGAACAGAGTCCCATCTGTGTGTTAGGTGGGCAGTGGAAATaGGAGGCCAGGCCAGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: VSQSQRIPVTEQSPICVLGGQWK*EARPEP Trigger: AGGCTCTGGCCTGGCCTCTCATTTCCACTGCCCACC...TAACACACAGATGGGACTCTGTTCTGTCACCGGAATTCTCTGTGACTGGCTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| 3UTR-3UTR TCA 90 bp | CCAGCATCCTTCGTGATGTCAACGGGCACCGTTTGGGGAGCAGGGGAGTACGGTCCTTCCAAAGGACAGTaGAAGAAGCTGAGCTGTTAC | + |
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Preference number: 2 (lower is better) Translates to: PASFVMSTGTVWGAGEYGPSKGQ*KKLSCY Trigger: GTAACAGCTCAGCTTCTTTCACTGTCCTTTGGAAGG...ACCGTACTCCCCTGCTCCCCAAACGGTGCCCGTTGACATCACGAAGGATGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| 3UTR CAA 90 bp | ACCCTGAGCAACTCATGCCAGGCTATTTCTGGTGACCCTTCTCCATaGCTGTTTGAGAGGTGGGCAGTGGAAATGAGAGGCCAGGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: TLSNSCQAISGDPSP*LFERWAVEMRGQAR Trigger: TCTGGCCTGGCCTCTCATTTCCACTGCCCACCTCTCAAACAGCAATGGAGAAGGGTCACCAGAAATAGCCTGGCATGAGTTGCTCAGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| 3UTR CAA 90 bp | CTTCTACCCATATCTGGTTGCCAGGGCAGCGGGATTCCTGAAACCTaGGCTTGTCTTCCTGAGGGCAAGACAAGCTTGGTGAGAGTTCAC | + |
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Preference number: 2 (lower is better) Translates to: LLPISGCQGSGIPET*ACLPEGKTSLVRVH Trigger: GTGAACTCTCACCAAGCTTGTCTTGCCCTCAGGAAGACAAGCCAAGGTTTCAGGAATCCCGCTGCCCTGGCAACCAGATATGGGTAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142472.8 |
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| 3UTR-3UTR TCA 90 bp | CTGAGCTCAGTCAGTGCTCTTTACCTCTGCACCATCTCTCCAGCCCCCAAAGGAGTAAATGCTGGTAGCTaGAGTCACACTCCAGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: LSSVSALYLCTISPAPKGVNAGS*SHTPAK Trigger: CTTTGCTGGAGTGTGACTTCAGCTACCAGCATTTAC...TCCTTTGGGGGCTGGAGAGATGGTGCAGAGGTAAAGAGCACTGACTGAGCTCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044462.4 |
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| 3UTR-3UTR TCA 90 bp | GACAGAACAGAGTCCCATCTGTGTGTTAAGCACACTGCCGTGGGGTTGAGTACTCTTGGCTTGTCTTCCTaGGGGCAAGACAAGCTTGGT | + |
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Preference number: 2 (lower is better) Translates to: DRTESHLCVKHTAVGLSTLGLSS*GQDKLG Trigger: ACCAAGCTTGTCTTGCCCTCAGGAAGACAAGCCAAG...AGTACTCAACCCCACGGCAGTGTGCTTAACACACAGATGGGACTCTGTTCTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142472.8 |
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| 3UTR-3UTR TCA 90 bp | GACAGAACAGAGTCCCATCTGTGTGTTAAGCACACTGCCGTGGGGTTGAGTACTGGTATAATGCTACAGTaGTCACAGCCATGCCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: DRTESHLCVKHTAVGLSTGIMLQ*SQPCPG Trigger: CCCTGGGCATGGCTGTGATCACTGTAGCATTATACC...AGTACTCAACCCCACGGCAGTGTGCTTAACACACAGATGGGACTCTGTTCTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142472.8 |
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| 3UTR-3UTR GCA 90 bp | GACAGAACAGAGTCCCATCTGTGTGTTAAGCACACTGCCGTGGGGTTGAGTACTGTGACCCTTCTCCATTaGTGTTTGAGAGGTGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: DRTESHLCVKHTAVGLSTVTLLH*CLRGGQ Trigger: CTGCCCACCTCTCAAACAGCAATGGAGAAGGGTCAC...AGTACTCAACCCCACGGCAGTGTGCTTAACACACAGATGGGACTCTGTTCTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGCATCCTTCGTGATGTCAACGGGCACCGTTTGGGGAGCAGGGGAGTACGGTTTTGAAGCCATCTTGTaGTACATAGTAAGTCCTTGG | + |
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Preference number: 2 (lower is better) Translates to: PASFVMSTGTVWGAGEYGFEAIL*YIVSPW Trigger: CCAAGGACTTACTATGTAGCACAAGATGGCTTCAAA...ACCGTACTCCCCTGCTCCCCAAACGGTGCCCGTTGACATCACGAAGGATGCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| 3UTR-3UTR TCA 90 bp | GACAGAACAGAGTCCCATCTGTGTGTTAAGCACACTGCCGTGGGGTTGAGTACTCCAGGCTATTTCTGGTaGCCCTTCTCCATTGCTGTT | + |
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Preference number: 2 (lower is better) Translates to: DRTESHLCVKHTAVGLSTPGYFW*PFSIAV Trigger: AACAGCAATGGAGAAGGGTCACCAGAAATAGCCTGG...AGTACTCAACCCCACGGCAGTGTGCTTAACACACAGATGGGACTCTGTTCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| 3UTR-3UTR TCA 90 bp | ATTCAGACACACCAGAAGAGGGCATCGGATCCCATTAAGATGGCTGTGAGCCACAACTCAAAAGAGAAATaGGCTCCAGACGGACTGGCT | + |
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Preference number: 2 (lower is better) Translates to: IQTHQKRASDPIKMAVSHNSKEK*APDGLA Trigger: AGCCAGTCCGTCTGGAGCTCATTTCTCTTTTGAGTT...GTGGCTCACAGCCATCTTAATGGGATCCGATGCCCTCTTCTGGTGTGTCTGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044462.4 |
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| 3UTR-3UTR TCA 90 bp | GATAATGAAGATGGTGGAGGAGCTGATGCCCTCAGGCAGGCCTTGGACAATGATTTCTCCATTGCTGTTTaGGAGGTGGGCAGTGGAAAT | + |
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Preference number: 2 (lower is better) Translates to: DNEDGGGADALRQALDNDFSIAV*EVGSGN Trigger: ATTTCCACTGCCCACCTCTCAAACAGCAATGGAGAA...ATCATTGTCCAAGGCCTGCCTGAGGGCATCAGCTCCTCCACCATCTTCATTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142472.8 |
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| 3UTR-3UTR TCA 90 bp | GTGAGCCAGTCACAGAGAATTCCGGTGACAGAACAGAGTCCCATCTGTGTGTTACCAGGCTATTTCTGGTaGCCCTTCTCCATTGCTGTT | + |
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Preference number: 2 (lower is better) Translates to: VSQSQRIPVTEQSPICVLPGYFW*PFSIAV Trigger: AACAGCAATGGAGAAGGGTCACCAGAAATAGCCTGG...TAACACACAGATGGGACTCTGTTCTGTCACCGGAATTCTCTGTGACTGGCTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| 3UTR-3UTR TCA 90 bp | ATTCAGACACACCAGAAGAGGGCATCGGATCCCATTAAGATGGCTGTGAGCCACTGTGAGCTTTGGTTTTaGGAGCAGGAAAAACAGGCC | + |
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Preference number: 2 (lower is better) Translates to: IQTHQKRASDPIKMAVSHCELWF*EQEKQA Trigger: GGCCTGTTTTTCCTGCTCTCAAAACCAAAGCTCACA...GTGGCTCACAGCCATCTTAATGGGATCCGATGCCCTCTTCTGGTGTGTCTGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044462.4 |
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| 3UTR-3UTR GCA 90 bp | TCACAGAGAATTCCGGTGACAGAACAGAGTCCCATCTGTGTGTTAAGCACACTGTGGGGGACAACGGAATaGAAGGAAGTGAAGCCTCAC | + |
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Preference number: 2 (lower is better) Translates to: SQRIPVTEQSPICVLSTLWGTTE*KEVKPH Trigger: GTGAGGCTTCACTTCCTTGCATTCCGTTGTCCCCCA...CAGTGTGCTTAACACACAGATGGGACTCTGTTCTGTCACCGGAATTCTCTGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| 3UTR-3UTR GCA 90 bp | GTGAGCCAGTCACAGAGAATTCCGGTGACAGAACAGAGTCCCATCTGTGTGTTAACCCTGAGCAACTCATaGCAGGCTATTTCTGGTGAC | + |
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Preference number: 2 (lower is better) Translates to: VSQSQRIPVTEQSPICVLTLSNS*QAISGD Trigger: GTCACCAGAAATAGCCTGGCATGAGTTGCTCAGGGT...TAACACACAGATGGGACTCTGTTCTGTCACCGGAATTCTCTGTGACTGGCTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| 3UTR-3UTR CCA 90 bp | ATGAGAGGCCAGGCCAGAGCCTTCTGTGTGCCTGAGAGTGACCTAGTTAAATACAACAGGCAATTCTTGTaGAGGGGGAGAGTAAACCTG | + |
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Preference number: 2 (lower is better) Translates to: MRGQARAFCVPESDLVKYNRQFL*RGRVNL Trigger: CAGGTTTACTCTCCCCCTCCACAAGAATTGCCTGTT...GTATTTAACTAGGTCACTCTCAGGCACACAGAAGGCTCTGGCCTGGCCTCTCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| 3UTR-3UTR CCA 90 bp | ACATTACCAACTAAAAGCTATCCTCAAAGTTCTGAAACGCAACCATTTATGCTTGAGCTCCAGACGGACTaGCTGCCAGCCACAGGGGCC | + |
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Preference number: 2 (lower is better) Translates to: TLPTKSYPQSSETQPFMLELQTD*LPATGA Trigger: GGCCCCTGTGGCTGGCAGCCAGTCCGTCTGGAGCTC...AAGCATAAATGGTTGCGTTTCAGAACTTTGAGGATAGCTTTTAGTTGGTAATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044462.4 |
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| 3UTR-3UTR CCA 90 bp | GTGAGCCAGTCACAGAGAATTCCGGTGACAGAACAGAGTCCCATCTGTGTGTTAGGATCCCTCACCAGATaGAACAATCAGACTGAAACG | + |
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Preference number: 2 (lower is better) Translates to: VSQSQRIPVTEQSPICVLGSLTR*NNQTET Trigger: CGTTTCAGTCTGATTGTTCCATCTGGTGAGGGATCC...TAACACACAGATGGGACTCTGTTCTGTCACCGGAATTCTCTGTGACTGGCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| 3UTR-3UTR CCA 90 bp | CATCTAGACGGACAGTCCTTCCAAAGGACAGTGAAAGAAGCTGAGCTGTTACTGTTGCTGTTTGAGAGGTaGGCAGTGGAAATGAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: HLDGQSFQRTVKEAELLLLLFER*AVEMRG Trigger: GCCTCTCATTTCCACTGCCCACCTCTCAAACAGCAA...CAGTAACAGCTCAGCTTCTTTCACTGTCCTTTGGAAGGACTGTCCGTCTAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| 3UTR-3UTR CCA 90 bp | CATCTAGACGGACAGTCCTTCCAAAGGACAGTGAAAGAAGCTGAGCTGTTACTGAGTTGGATTTCCCTCTaGGATGCAGGCAAGCATCTG | + |
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Preference number: 2 (lower is better) Translates to: HLDGQSFQRTVKEAELLLSWISL*DAGKHL Trigger: CAGATGCTTGCCTGCATCCCAGAGGGAAATCCAACT...CAGTAACAGCTCAGCTTCTTTCACTGTCCTTTGGAAGGACTGTCCGTCTAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142472.8 |
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| 3UTR-3UTR TCA 90 bp | ACATTACCAACTAAAAGCTATCCTCAAAGTTCTGAAACGCAACCATTTATGCTTAGCCACAGGGGCCCGTaGAACCCTGCTTTGGGGGAC | + |
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Preference number: 2 (lower is better) Translates to: TLPTKSYPQSSETQPFMLSHRGP*NPALGD Trigger: GTCCCCCAAAGCAGGGTTTCACGGGCCCCTGTGGCT...AAGCATAAATGGTTGCGTTTCAGAACTTTGAGGATAGCTTTTAGTTGGTAATGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044462.4 |
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| 3UTR-3UTR TCA 90 bp | ATGAGTGTGAGCTTTGGTTTTGAGAGCAGGAAAAACAGGCCACTGACTGGAACTCCTTCCAAAGGACAGTaGAAGAAGCTGAGCTGTTAC | + |
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Preference number: 2 (lower is better) Translates to: MSVSFGFESRKNRPLTGTPSKGQ*KKLSCY Trigger: GTAACAGCTCAGCTTCTTTCACTGTCCTTTGGAAGG...AGTTCCAGTCAGTGGCCTGTTTTTCCTGCTCTCAAAACCAAAGCTCACACTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044462.4 |
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| 3UTR-3UTR TCA 90 bp | CATCTAGACGGACAGTCCTTCCAAAGGACAGTGAAAGAAGCTGAGCTGTTACTGCTTGTCCCTGAACTATaGAATAAGTTCCTAGCCAGT | + |
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Preference number: 2 (lower is better) Translates to: HLDGQSFQRTVKEAELLLLVPEL*NKFLAS Trigger: ACTGGCTAGGAACTTATTTCATAGTTCAGGGACAAG...CAGTAACAGCTCAGCTTCTTTCACTGTCCTTTGGAAGGACTGTCCGTCTAGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGGATCCCTCACCAGATGGAACAATCAGACTGAAACGTCTACAAACTGGAATTTCACTGACCCAAAGTaGAATTGCAGAGGGTTACAC | + |
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Preference number: 2 (lower is better) Translates to: RGSLTRWNNQTETSTNWNFTDPK*NCRGLH Trigger: GTGTAACCCTCTGCAATTTCACTTTGGGTCAGTGAA...ATTCCAGTTTGTAGACGTTTCAGTCTGATTGTTCCATCTGGTGAGGGATCCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGGATCCCTCACCAGATGGAACAATCAGACTGAAACGTCTACAAACTGGAATCTTGTCCCTGAACTATaGAATAAGTTCCTAGCCAGT | + |
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Preference number: 2 (lower is better) Translates to: RGSLTRWNNQTETSTNWNLVPEL*NKFLAS Trigger: ACTGGCTAGGAACTTATTTCATAGTTCAGGGACAAG...ATTCCAGTTTGTAGACGTTTCAGTCTGATTGTTCCATCTGGTGAGGGATCCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| 3UTR-3UTR TCA 90 bp | AACACAAGCTTCACTTACGATAACGGGAAAAGAAACTCATATTCACAAAGCCTATGTTACTGCATAGGGTaGGCCAGTCACAGAGAATTC | + |
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Preference number: 2 (lower is better) Translates to: NTSFTYDNGKRNSYSQSLCYCIG*ASHREF Trigger: GAATTCTCTGTGACTGGCTCACCCTATGCAGTAACA...TAGGCTTTGTGAATATGAGTTTCTTTTCCCGTTATCGTAAGTGAAGCTTGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044462.4 |
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| 3UTR-3UTR TCA 90 bp | ACATTACCAACTAAAAGCTATCCTCAAAGTTCTGAAACGCAACCATTTATGCTTAAGTTAGTTCGGGTGTaGTGGTACACACTTGTAGTC | + |
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Preference number: 2 (lower is better) Translates to: TLPTKSYPQSSETQPFMLKLVRV*WYTLVV Trigger: GACTACAAGTGTGTACCATCACACCCGAACTAACTT...AAGCATAAATGGTTGCGTTTCAGAACTTTGAGGATAGCTTTTAGTTGGTAATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044462.4 |
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| 3UTR TCA 72 bp | TGCGCGTGGCATTCCTCCGCCCGAATGTCAGAGAACTaGCTCTCCTCGCCCTTGCTTTGCTCCCGCGGCCTG | + |
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Preference number: 3 (lower is better) Translates to: CAWHSSARMSEN*LSSPLLCSRGL Trigger: CAGGCCGCGGGAGCAAAGCAAGGGCGAGGAGAGTCAGTTCTCTGACATTCGGGCGGAGGAATGCCACGCGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142472.8 |
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| 3UTR GCA 72 bp | CCGCCCGAATGTCAGAGAACTGACTCTCCTCGCCCTTaGTTTGCTCCCGCGGCCTGTGCATCCGTTTCCTAC | + |
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Preference number: 3 (lower is better) Translates to: PPECQRTDSPRP*FAPAACASVSY Trigger: GTAGGAAACGGATGCACAGGCCGCGGGAGCAAAGCAAGGGCGAGGAGAGTCAGTTCTCTGACATTCGGGCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142472.8 |
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| 3UTR-3UTR CAA 90 bp | CTGAGCTCAGTCAGTGCTCTTTACCTCTGCACCATCTCTCCAGCCCCCAAAGGACTCCTTGGCCCGCTCTaGCGTCCCTGTAAATGCTGG | + |
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Preference number: 3 (lower is better) Translates to: LSSVSALYLCTISPAPKGLLGPL*RPCKCW Trigger: CCAGCATTTACAGGGACGCAAGAGCGGGCCAAGGAG...TCCTTTGGGGGCTGGAGAGATGGTGCAGAGGTAAAGAGCACTGACTGAGCTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044462.4 |
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| 3UTR GCA 72 bp | GGGGCCCGTGAAACCCTGCTTTGGGGGACAACGGAATaGAAGGAAGTGAAGCCTCACATTGTCTCCGCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: GARETLLWGTTE*KEVKPHIVSAF Trigger: GAAGGCGGAGACAATGTGAGGCTTCACTTCCTTGCATTCCGTTGTCCCCCAAAGCAGGGTTTCACGGGCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| 3UTR TCA 72 bp | AAACCCTGCTTTGGGGGACAACGGAATGCAAGGAAGTaGAGCCTCACATTGTCTCCGCCTTCCTCCTTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: KPCFGGQRNARK*SLTLSPPSSLA Trigger: GGCCAAGGAGGAAGGCGGAGACAATGTGAGGCTTCACTTCCTTGCATTCCGTTGTCCCCCAAAGCAGGGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| 3UTR CCA 72 bp | GCACACTGCCGTGGGGTTGAGTACTTCCATTCTAGGTaGGACTCTGTGGCACCGACAACGATGAAAACAGGC | + |
|
Preference number: 3 (lower is better) Translates to: AHCRGVEYFHSR*DSVAPTTMKTG Trigger: GCCTGTTTTCATCGTTGTCGGTGCCACAGAGTCCCACCTAGAATGGAAGTACTCAACCCCACGGCAGTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| 3UTR TCA 72 bp | GGAGTTGGATTTCCCTCTGGGATGCAGGCAAGCATCTaGTGCATCCCTTCTACCCATATCTGGTTGCCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: GVGFPSGMQASI*CIPSTHIWLPG Trigger: CCCTGGCAACCAGATATGGGTAGAAGGGATGCATCAGATGCTTGCCTGCATCCCAGAGGGAAATCCAACTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142472.8 |
||
| 3UTR GCA 72 bp | CACTCCAGCAAAGAGTTTGTTTGTGGTCAGCAGAGATaGGCGTGGCATTCCTCCGCCCGAATGTCAGAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: HSSKEFVCGQQR*AWHSSARMSEN Trigger: GTTCTCTGACATTCGGGCGGAGGAATGCCACGCGCATCTCTGCTGACCACAAACAAACTCTTTGCTGGAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142472.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGGTAGGAATGAGAGGATCCCTCACCAGATGGAACAATCAGACTGAAACGTCTCTCCTTGGCCCGCTCTaGCGTCCCTGTAAATGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: RVGMRGSLTRWNNQTETSLLGPL*RPCKCW Trigger: CCAGCATTTACAGGGACGCAAGAGCGGGCCAAGGAG...AGACGTTTCAGTCTGATTGTTCCATCTGGTGAGGGATCCTCTCATTCCTACCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| 3UTR GCA 72 bp | TTCCTAGCCAGTCATCCGGAAACCCTGAGCAACTCATaGCAGGCTATTTCTGGTGACCCTTCTCCATTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: FLASHPETLSNS*QAISGDPSPLL Trigger: CAGCAATGGAGAAGGGTCACCAGAAATAGCCTGGCATGAGTTGCTCAGGGTTTCCGGATGACTGGCTAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCAGGCTATTTCTGGTGACCCTTCTCCATTGCTGTTTGAGAGGTGGGCAGTGGGAGGGCAAGACAAGCTaGGTGAGAGTTCACTTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: ARLFLVTLLHCCLRGGQWEGKTS*VRVHFL Trigger: AAGAAAGTGAACTCTCACCAAGCTTGTCTTGCCCTC...CCACTGCCCACCTCTCAAACAGCAATGGAGAAGGGTCACCAGAAATAGCCTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142472.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAGCATCCTTCGTGATGTCAACGGGCACCGTTTGGGGAGCAGGGGAGTACGGTCCTATGTATGAAGTCTaGTCCCTGAACTATGAAATA | + |
|
Preference number: 3 (lower is better) Translates to: PASFVMSTGTVWGAGEYGPMYEV*SLNYEI Trigger: TATTTCATAGTTCAGGGACAAGACTTCATACATAGG...ACCGTACTCCCCTGCTCCCCAAACGGTGCCCGTTGACATCACGAAGGATGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| 3UTR TCA 72 bp | AAGATGGCTGTGAGCCACCACGTGGTTGTTGAGAACTaGGCTCAGTCAGTGCTCTTTACCTCTGCACCATCT | + |
|
Preference number: 3 (lower is better) Translates to: KMAVSHHVVVEN*AQSVLFTSAPS Trigger: AGATGGTGCAGAGGTAAAGAGCACTGACTGAGCTCAGTTCTCAACAACCACGTGGTGGCTCACAGCCATCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044462.4 |
||
| 3UTR CCA 72 bp | GATCATCCCATTCCAGACACACACCAAAACCGGAGTTaGATTTCCCTCTGGGATGCAGGCAAGCATCTGATG | + |
|
Preference number: 3 (lower is better) Translates to: DHPIPDTHQNRS*ISLWDAGKHLM Trigger: CATCAGATGCTTGCCTGCATCCCAGAGGGAAATCCAACTCCGGTTTTGGTGTGTGTCTGGAATGGGATGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142472.8 |
||
| 3UTR TCA 72 bp | TCCATTCTAGGTGGGACTCTGTGGCACCGACAACGATaGAAACAGGCAATTCTTGTGGAGGGGGAGAGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: SILGGTLWHRQR*KQAILVEGESK Trigger: TTTACTCTCCCCCTCCACAAGAATTGCCTGTTTTCATCGTTGTCGGTGCCACAGAGTCCCACCTAGAATGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| 3UTR CCA 72 bp | TGGGACTCCGCCTCTAACAGAAAGGGATTCGGAGTGTaGCACCCTAAGACCGATTTCATGGAGATAGTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: WDSASNRKGFGV*HPKTDFMEIVY Trigger: ATAGACTATCTCCATGAAATCGGTCTTAGGGTGCCACACTCCGAATCCCTTTCTGTTAGAGGCGGAGTCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| 3UTR-3UTR CAA 90 bp | CATCTAGACGGACAGTCCTTCCAAAGGACAGTGAAAGAAGCTGAGCTGTTACTGCTTCTCCATTGCTGTTaGAGAGGTGGGCAGTGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: HLDGQSFQRTVKEAELLLLLHCC*RGGQWK Trigger: TTTCCACTGCCCACCTCTCAAACAGCAATGGAGAAG...CAGTAACAGCTCAGCTTCTTTCACTGTCCTTTGGAAGGACTGTCCGTCTAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| 3UTR TCA 72 bp | CTTTACCTCTGCACCATCTCTCCAGCCCCCAAAGGATaGTTTTTACACCAAATCCTTAACCTCAGATTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LYLCTISPAPKG*FLHQILNLRFR Trigger: CCTGAATCTGAGGTTAAGGATTTGGTGTAAAAATCATCCTTTGGGGGCTGGAGAGATGGTGCAGAGGTAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000044462.4 |
||
| 3UTR GCA 72 bp | GCAGGGGAGTACGGTCAGGGGAAGAGTTCTAATTCCTaGCTATTGATTTGTTATCCTATGTATGAAGTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: AGEYGQGKSSNS*LLICYPMYEVL Trigger: CAAGACTTCATACATAGGATAACAAATCAATAGGCAGGAATTAGAACTCTTCCCCTGACCGTACTCCCCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| 3UTR-3UTR CAA 90 bp | ACATTACCAACTAAAAGCTATCCTCAAAGTTCTGAAACGCAACCATTTATGCTTGGTGACCCTTCTCCATaGCTGTTTGAGAGGTGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: TLPTKSYPQSSETQPFMLGDPSP*LFERWA Trigger: TGCCCACCTCTCAAACAGCAATGGAGAAGGGTCACC...AAGCATAAATGGTTGCGTTTCAGAACTTTGAGGATAGCTTTTAGTTGGTAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044462.4 |
||
| 3UTR CCA 72 bp | AAATACAGGGTAGGAATGAGAGGATCCCTCACCAGATaGAACAATCAGACTGAAACGTCTACAAACTGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: KYRVGMRGSLTR*NNQTETSTNWN Trigger: ATTCCAGTTTGTAGACGTTTCAGTCTGATTGTTCCATCTGGTGAGGGATCCTCTCATTCCTACCCTGTATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| 3UTR CCA 72 bp | ACCAGATGGAACAATCAGACTGAAACGTCTACAAACTaGAATAAACTCAAAAGAGAAATGAGCTCCAGACGG | + |
|
Preference number: 3 (lower is better) Translates to: TRWNNQTETSTN*NKLKREMSSRR Trigger: CCGTCTGGAGCTCATTTCTCTTTTGAGTTTATTCCAGTTTGTAGACGTTTCAGTCTGATTGTTCCATCTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| CDS-3UTR CCA 90 bp | TTGTCTCCGCCTTCCTCCTTGGCCCGCTCTTGCGTCCCTGTAAATGCTGGTAGCGGTCACCAGTCTCCATaGCCTGAATGGTGGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSPPSSLARSCVPVNAGSGHQSP*PEWWHW Trigger: CCAGTGCCACCATTCAGGCCATGGAGACTGGTGACC...GCTACCAGCATTTACAGGGACGCAAGAGCGGGCCAAGGAGGAAGGCGGAGACAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| CDS-3UTR TCA 90 bp | CCAGCATCCTTCGTGATGTCAACGGGCACCGTTTGGGGAGCAGGGGAGTACGGTGGGCAGCGGGATTCCTaGAACCTTGGCTTGTATAAG | + |
|
Preference number: 4 (lower is better) Translates to: PASFVMSTGTVWGAGEYGGQRDS*NLGLYK Trigger: CTTATACAAGCCAAGGTTTCAGGAATCCCGCTGCCC...ACCGTACTCCCCTGCTCCCCAAACGGTGCCCGTTGACATCACGAAGGATGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044462.4 |
||
| CDS-3UTR TCA 90 bp | CCAGCATCCTTCGTGATGTCAACGGGCACCGTTTGGGGAGCAGGGGAGTACGGTAGGTGGTACTGCAGTTaGCAGTTAGGGAGTGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PASFVMSTGTVWGAGEYGRWYCS*QLGSVQ Trigger: TTGGACACTCCCTAACTGTCAACTGCAGTACCACCT...ACCGTACTCCCCTGCTCCCCAAACGGTGCCCGTTGACATCACGAAGGATGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| CDS-3UTR TCA 90 bp | TTGTCTCCGCCTTCCTCCTTGGCCCGCTCTTGCGTCCCTGTAAATGCTGGTAGCGCACCAAGTCCTCTGTaGTGTCCTCCAGGAGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: LSPPSSLARSCVPVNAGSAPSPL*CPPGET Trigger: AGTTTCTCCTGGAGGACATCACAGAGGACTTGGTGC...GCTACCAGCATTTACAGGGACGCAAGAGCGGGCCAAGGAGGAAGGCGGAGACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| 3UTR CAA 72 bp | CCGAATGTCAGAGAACTGACTCTCCTCGCCCTTGCTTaGCTCCCGCGGCCTGTGCATCCGTTTCCTACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PNVRELTLLALA*LPRPVHPFPTV Trigger: AACAGTAGGAAACGGATGCACAGGCCGCGGGAGCAAAGCAAGGGCGAGGAGAGTCAGTTCTCTGACATTCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142472.8 |
||
| CDS-3UTR TCA 90 bp | CCAGCATCCTTCGTGATGTCAACGGGCACCGTTTGGGGAGCAGGGGAGTACGGTGGTGATGTTAACACGTaGCCTGAGCAGGTCACATTA | + |
|
Preference number: 4 (lower is better) Translates to: PASFVMSTGTVWGAGEYGGDVNT*PEQVTL Trigger: TAATGTGACCTGCTCAGGTCACGTGTTAACATCACC...ACCGTACTCCCCTGCTCCCCAAACGGTGCCCGTTGACATCACGAAGGATGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| CDS-3UTR TCA 90 bp | TTGTCTCCGCCTTCCTCCTTGGCCCGCTCTTGCGTCCCTGTAAATGCTGGTAGCGGCTTGTATAAGACATaGAGCTGGCTCTCTGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSPPSSLARSCVPVNAGSGLYKT*SWLSVV Trigger: GACCACAGAGAGCCAGCTTCATGTCTTATACAAGCC...GCTACCAGCATTTACAGGGACGCAAGAGCGGGCCAAGGAGGAAGGCGGAGACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044462.4 |
||
| CDS-3UTR CCA 90 bp | GTGAGCCAGTCACAGAGAATTCCGGTGACAGAACAGAGTCCCATCTGTGTGTTAAGGTCTCGATTCCACTaGGCCCAGGGTCTGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VSQSQRIPVTEQSPICVLRSRFH*AQGLGR Trigger: CCTGCCCAGACCCTGGGCCCAGTGGAATCGAGACCT...TAACACACAGATGGGACTCTGTTCTGTCACCGGAATTCTCTGTGACTGGCTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| CDS-3UTR CCA 90 bp | ATGAGAGGCCAGGCCAGAGCCTTCTGTGTGCCTGAGAGTGACCTAGTTAAATACCCATGGCCTGAATGGTaGCACTGGCCCACGCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: MRGQARAFCVPESDLVKYPWPEW*HWPTLH Trigger: ATGCAGCGTGGGCCAGTGCCACCATTCAGGCCATGG...GTATTTAACTAGGTCACTCTCAGGCACACAGAAGGCTCTGGCCTGGCCTCTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| CDS-3UTR CCA 90 bp | ATGAGAGGCCAGGCCAGAGCCTTCTGTGTGCCTGAGAGTGACCTAGTTAAATACTCTCCATGGCCTGAATaGTGGCACTGGCCCACGCTG | + |
|
Preference number: 4 (lower is better) Translates to: MRGQARAFCVPESDLVKYSPWPE*WHWPTL Trigger: CAGCGTGGGCCAGTGCCACCATTCAGGCCATGGAGA...GTATTTAACTAGGTCACTCTCAGGCACACAGAAGGCTCTGGCCTGGCCTCTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| 3UTR CAA 72 bp | CTCTGTGGCACCGACAACGATGAAAACAGGCAATTCTaGTGGAGGGGGAGAGTAAACCTGGGACTCCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LCGTDNDENRQF*WRGRVNLGLRL Trigger: GAGGCGGAGTCCCAGGTTTACTCTCCCCCTCCACAAGAATTGCCTGTTTTCATCGTTGTCGGTGCCACAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| CDS-3UTR TCA 90 bp | GACAGAACAGAGTCCCATCTGTGTGTTAAGCACACTGCCGTGGGGTTGAGTACTGAGTTGCTTGGTGGCTaGGCTGCCGTGAAACAACCC | + |
|
Preference number: 4 (lower is better) Translates to: DRTESHLCVKHTAVGLSTELLGG*AAVKQP Trigger: GGGTTGTTTCACGGCAGCTCAGCCACCAAGCAACTC...AGTACTCAACCCCACGGCAGTGTGCTTAACACACAGATGGGACTCTGTTCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| CDS-3UTR TCA 90 bp | AGGGTAGGAATGAGAGGATCCCTCACCAGATGGAACAATCAGACTGAAACGTCTCCAGTCTCCATGGCCTaGATGGTGGCACTGGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RVGMRGSLTRWNNQTETSPVSMA*MVALAH Trigger: GTGGGCCAGTGCCACCATTCAGGCCATGGAGACTGG...AGACGTTTCAGTCTGATTGTTCCATCTGGTGAGGGATCCTCTCATTCCTACCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| CDS-3UTR TCA 90 bp | TCACAGAGAATTCCGGTGACAGAACAGAGTCCCATCTGTGTGTTAAGCACACTGCCAGTCTCCATGGCCTaGATGGTGGCACTGGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SQRIPVTEQSPICVLSTLPVSMA*MVALAH Trigger: GTGGGCCAGTGCCACCATTCAGGCCATGGAGACTGG...CAGTGTGCTTAACACACAGATGGGACTCTGTTCTGTCACCGGAATTCTCTGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| CDS-3UTR TCA 90 bp | GCCAGGCTATTTCTGGTGACCCTTCTCCATTGCTGTTTGAGAGGTGGGCAGTGGTGGTTTAGGGATCCCTaGAGCCGAAGAGTAGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: ARLFLVTLLHCCLRGGQWWFRDP*SRRVGL Trigger: TAGCCCTACTCTTCGGCTTCAGGGATCCCTAAACCA...CCACTGCCCACCTCTCAAACAGCAATGGAGAAGGGTCACCAGAAATAGCCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| CDS-3UTR TCA 90 bp | CATCTAGACGGACAGTCCTTCCAAAGGACAGTGAAAGAAGCTGAGCTGTTACTGGGCTCTCTGTGGTCCTaGCCAGTCGCTGGCCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: HLDGQSFQRTVKEAELLLGSLWS*PVAGPV Trigger: TACAGGGCCAGCGACTGGTCAGGACCACAGAGAGCC...CAGTAACAGCTCAGCTTCTTTCACTGTCCTTTGGAAGGACTGTCCGTCTAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| CDS-3UTR TCA 90 bp | TCACAGAGAATTCCGGTGACAGAACAGAGTCCCATCTGTGTGTTAAGCACACTGGGCTCTCTGTGGTCCTaGCCAGTCGCTGGCCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SQRIPVTEQSPICVLSTLGSLWS*PVAGPV Trigger: TACAGGGCCAGCGACTGGTCAGGACCACAGAGAGCC...CAGTGTGCTTAACACACAGATGGGACTCTGTTCTGTCACCGGAATTCTCTGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| CDS-3UTR GCA 90 bp | CATTCTAGGTGGGACTCTGTGGCACCGACAACGATGAAAACAGGCAATTCTTGTGACTCTCCTCGCCCTTaGTTTGCTCCCGCGGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HSRWDSVAPTTMKTGNSCDSPRP*FAPAAC Trigger: ACAGGCCGCGGGAGCAAAGCAAGGGCGAGGAGAGTC...ACAAGAATTGCCTGTTTTCATCGTTGTCGGTGCCACAGAGTCCCACCTAGAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044462.4 |
||
| CDS-3UTR CCA 90 bp | GTGAGCCAGTCACAGAGAATTCCGGTGACAGAACAGAGTCCCATCTGTGTGTTAACTGGGCCCAGGGTCTaGGCAGGTGGTACTGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VSQSQRIPVTEQSPICVLTGPRV*AGGTAV Trigger: AACTGCAGTACCACCTGCCCAGACCCTGGGCCCAGT...TAACACACAGATGGGACTCTGTTCTGTCACCGGAATTCTCTGTGACTGGCTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| 3UTR CAA 72 bp | ATATCTGGTTGCCAGGGCAGCGGGATTCCTGAAACCTaGGCTTGTCTTCCTGAGGGCAAGACAAGCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ISGCQGSGIPET*ACLPEGKTSLV Trigger: CACCAAGCTTGTCTTGCCCTCAGGAAGACAAGCCAAGGTTTCAGGAATCCCGCTGCCCTGGCAACCAGATAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142472.8 |
||
| CDS-3UTR GCA 90 bp | TTGTCTCCGCCTTCCTCCTTGGCCCGCTCTTGCGTCCCTGTAAATGCTGGTAGCTCCACTGGGACCCTTTaGTTAGCTGGGTTTTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LSPPSSLARSCVPVNAGSSTGTL*LAGFSL Trigger: TAAAGAAAACCCAGCTAAGCAAAGGGTCCCAGTGGA...GCTACCAGCATTTACAGGGACGCAAGAGCGGGCCAAGGAGGAAGGCGGAGACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| CDS-3UTR CCA 90 bp | CATTCTAGGTGGGACTCTGTGGCACCGACAACGATGAAAACAGGCAATTCTTGTACTGGGCCCAGGGTCTaGGCAGGTGGTACTGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: HSRWDSVAPTTMKTGNSCTGPRV*AGGTAV Trigger: AACTGCAGTACCACCTGCCCAGACCCTGGGCCCAGT...ACAAGAATTGCCTGTTTTCATCGTTGTCGGTGCCACAGAGTCCCACCTAGAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| CDS-3UTR CCA 90 bp | GCCAGGCTATTTCTGGTGACCCTTCTCCATTGCTGTTTGAGAGGTGGGCAGTGGCAGTATCACCTGCTCTaGTGGCTGGTACATGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: ARLFLVTLLHCCLRGGQWQYHLL*WLVHGD Trigger: ATCACCATGTACCAGCCACCAGAGCAGGTGATACTG...CCACTGCCCACCTCTCAAACAGCAATGGAGAAGGGTCACCAGAAATAGCCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| CDS-3UTR CCA 90 bp | GACAGAACAGAGTCCCATCTGTGTGTTAAGCACACTGCCGTGGGGTTGAGTACTAGTTCTTGGTCACCCTaGAGGAGGGTAAGGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: DRTESHLCVKHTAVGLSTSSWSP*RRVRVR Trigger: CCTCACCCTTACCCTCCTCCAGGGTGACCAAGAACT...AGTACTCAACCCCACGGCAGTGTGCTTAACACACAGATGGGACTCTGTTCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| CDS-3UTR CCA 90 bp | CATCTAGACGGACAGTCCTTCCAAAGGACAGTGAAAGAAGCTGAGCTGTTACTGTCTCCATGGCCTGAATaGTGGCACTGGCCCACGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HLDGQSFQRTVKEAELLLSPWPE*WHWPTL Trigger: CAGCGTGGGCCAGTGCCACCATTCAGGCCATGGAGA...CAGTAACAGCTCAGCTTCTTTCACTGTCCTTTGGAAGGACTGTCCGTCTAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| CDS-3UTR TCA 90 bp | CTGGTAGCTGAAGTCACACTCCAGCAAAGAGTTTGTTTGTGGTCAGCAGAGATGGAGTTGCTTGGTGGCTaGGCTGCCGTGAAACAACCC | + |
|
Preference number: 4 (lower is better) Translates to: LVAEVTLQQRVCLWSAEMELLGG*AAVKQP Trigger: GGGTTGTTTCACGGCAGCTCAGCCACCAAGCAACTC...CATCTCTGCTGACCACAAACAAACTCTTTGCTGGAGTGTGACTTCAGCTACCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142472.8 |
||
| CDS-3UTR CCA 90 bp | GACAGAACAGAGTCCCATCTGTGTGTTAAGCACACTGCCGTGGGGTTGAGTACTCGGAAGACAGCTTCCTaGGCTGGAAATACTCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: DRTESHLCVKHTAVGLSTRKTAS*AGNTLV Trigger: GACCAGAGTATTTCCAGCCCAGGAAGCTGTCTTCCG...AGTACTCAACCCCACGGCAGTGTGCTTAACACACAGATGGGACTCTGTTCTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| CDS-3UTR CCA 90 bp | CATCTAGACGGACAGTCCTTCCAAAGGACAGTGAAAGAAGCTGAGCTGTTACTGGGTCACCAGTCTCCATaGCCTGAATGGTGGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: HLDGQSFQRTVKEAELLLGHQSP*PEWWHW Trigger: CCAGTGCCACCATTCAGGCCATGGAGACTGGTGACC...CAGTAACAGCTCAGCTTCTTTCACTGTCCTTTGGAAGGACTGTCCGTCTAGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| CDS-3UTR TCA 90 bp | GTGAGCCAGTCACAGAGAATTCCGGTGACAGAACAGAGTCCCATCTGTGTGTTAGCCACACTAGGTACATaGCACGTGACTGTGAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VSQSQRIPVTEQSPICVLATLGT*HVTVKA Trigger: AGCCTTCACAGTCACGTGTCATGTACCTAGTGTGGC...TAACACACAGATGGGACTCTGTTCTGTCACCGGAATTCTCTGTGACTGGCTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| CDS-3UTR GCA 90 bp | ATGAGAGGCCAGGCCAGAGCCTTCTGTGTGCCTGAGAGTGACCTAGTTAAATACGATTTCCCTCTGGGATaGAGGCAAGCATCTGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: MRGQARAFCVPESDLVKYDFPLG*RQASDA Trigger: TGCATCAGATGCTTGCCTGCATCCCAGAGGGAAATC...GTATTTAACTAGGTCACTCTCAGGCACACAGAAGGCTCTGGCCTGGCCTCTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044462.4 |
||
| CDS-3UTR CCA 90 bp | GACAGAACAGAGTCCCATCTGTGTGTTAAGCACACTGCCGTGGGGTTGAGTACTAGTTGGATTTCCCTCTaGGATGCAGGCAAGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: DRTESHLCVKHTAVGLSTSWISL*DAGKHL Trigger: CAGATGCTTGCCTGCATCCCAGAGGGAAATCCAACT...AGTACTCAACCCCACGGCAGTGTGCTTAACACACAGATGGGACTCTGTTCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044462.4 |
||
| 3UTR CAA 72 bp | AACTCATGCCAGGCTATTTCTGGTGACCCTTCTCCATaGCTGTTTGAGAGGTGGGCAGTGGAAATGAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NSCQAISGDPSP*LFERWAVEMRG Trigger: GCCTCTCATTTCCACTGCCCACCTCTCAAACAGCAATGGAGAAGGGTCACCAGAAATAGCCTGGCATGAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| CDS-3UTR TCA 90 bp | GTGAGCCAGTCACAGAGAATTCCGGTGACAGAACAGAGTCCCATCTGTGTGTTAAGGTGGTACTGCAGTTaGCAGTTAGGGAGTGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VSQSQRIPVTEQSPICVLRWYCS*QLGSVQ Trigger: TTGGACACTCCCTAACTGTCAACTGCAGTACCACCT...TAACACACAGATGGGACTCTGTTCTGTCACCGGAATTCTCTGTGACTGGCTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| CDS-3UTR GCA 90 bp | ATGAGTGTGAGCTTTGGTTTTGAGAGCAGGAAAAACAGGCCACTGACTGGAACTGAGGCTCTGCAGGGGTaGCACACTAGGTACATGACA | + |
|
Preference number: 4 (lower is better) Translates to: MSVSFGFESRKNRPLTGTEALQG*HTRYMT Trigger: TGTCATGTACCTAGTGTGGCACCCCTGCAGAGCCTC...AGTTCCAGTCAGTGGCCTGTTTTTCCTGCTCTCAAAACCAAAGCTCACACTCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044462.4 |
||
| CDS-3UTR GCA 90 bp | GACAGAACAGAGTCCCATCTGTGTGTTAAGCACACTGCCGTGGGGTTGAGTACTTCCTACTGTTTCCTTTaGAGGGCTGGTAGTTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: DRTESHLCVKHTAVGLSTSYCFL*RAGSSG Trigger: ACCTGAACTACCAGCCCTGCAAAGGAAACAGTAGGA...AGTACTCAACCCCACGGCAGTGTGCTTAACACACAGATGGGACTCTGTTCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044462.4 |
||
| CDS-3UTR CCA 90 bp | CATCTAGACGGACAGTCCTTCCAAAGGACAGTGAAAGAAGCTGAGCTGTTACTGGACAGCTTCCTGGGCTaGAAATACTCTGGTCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: HLDGQSFQRTVKEAELLLDSFLG*KYSGHL Trigger: GAGGTGACCAGAGTATTTCCAGCCCAGGAAGCTGTC...CAGTAACAGCTCAGCTTCTTTCACTGTCCTTTGGAAGGACTGTCCGTCTAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| CDS-3UTR CCA 90 bp | CATTCTAGGTGGGACTCTGTGGCACCGACAACGATGAAAACAGGCAATTCTTGTCGGAAGACAGCTTCCTaGGCTGGAAATACTCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: HSRWDSVAPTTMKTGNSCRKTAS*AGNTLV Trigger: GACCAGAGTATTTCCAGCCCAGGAAGCTGTCTTCCG...ACAAGAATTGCCTGTTTTCATCGTTGTCGGTGCCACAGAGTCCCACCTAGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| CDS-3UTR CCA 90 bp | CATCTAGACGGACAGTCCTTCCAAAGGACAGTGAAAGAAGCTGAGCTGTTACTGAAAGGGCTCAGCTCCTaGTCTTCCAGGAACATTCGG | + |
|
Preference number: 4 (lower is better) Translates to: HLDGQSFQRTVKEAELLLKGLSS*SSRNIR Trigger: CCGAATGTTCCTGGAAGACCAGGAGCTGAGCCCTTT...CAGTAACAGCTCAGCTTCTTTCACTGTCCTTTGGAAGGACTGTCCGTCTAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| CDS-3UTR CCA 90 bp | CATTCTAGGTGGGACTCTGTGGCACCGACAACGATGAAAACAGGCAATTCTTGTAAAGGGCTCAGCTCCTaGTCTTCCAGGAACATTCGG | + |
|
Preference number: 4 (lower is better) Translates to: HSRWDSVAPTTMKTGNSCKGLSS*SSRNIR Trigger: CCGAATGTTCCTGGAAGACCAGGAGCTGAGCCCTTT...ACAAGAATTGCCTGTTTTCATCGTTGTCGGTGCCACAGAGTCCCACCTAGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| 3UTR CAA 72 bp | AGATCATCCCATTCCAGACACACACCAAAACCGGAGTaGGATTTCCCTCTGGGATGCAGGCAAGCATCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RSSHSRHTPKPE*DFPLGCRQASD Trigger: ATCAGATGCTTGCCTGCATCCCAGAGGGAAATCCAACTCCGGTTTTGGTGTGTGTCTGGAATGGGATGATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142472.8 |
||
| CDS-3UTR GCA 90 bp | ATGAGAGGCCAGGCCAGAGCCTTCTGTGTGCCTGAGAGTGACCTAGTTAAATACTCCACTGGGACCCTTTaGTTAGCTGGGTTTTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: MRGQARAFCVPESDLVKYSTGTL*LAGFSL Trigger: TAAAGAAAACCCAGCTAAGCAAAGGGTCCCAGTGGA...GTATTTAACTAGGTCACTCTCAGGCACACAGAAGGCTCTGGCCTGGCCTCTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| CDS-3UTR CCA 90 bp | AGGGTAGGAATGAGAGGATCCCTCACCAGATGGAACAATCAGACTGAAACGTCTGGGCTGGAAATACTCTaGTCACCTCACAGCTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: RVGMRGSLTRWNNQTETSGLEIL*SPHSSQ Trigger: TTGTGAGCTGTGAGGTGACCAGAGTATTTCCAGCCC...AGACGTTTCAGTCTGATTGTTCCATCTGGTGAGGGATCCTCTCATTCCTACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| CDS-3UTR TCA 90 bp | CATTCTAGGTGGGACTCTGTGGCACCGACAACGATGAAAACAGGCAATTCTTGTGGTGATGTTAACACGTaGCCTGAGCAGGTCACATTA | + |
|
Preference number: 4 (lower is better) Translates to: HSRWDSVAPTTMKTGNSCGDVNT*PEQVTL Trigger: TAATGTGACCTGCTCAGGTCACGTGTTAACATCACC...ACAAGAATTGCCTGTTTTCATCGTTGTCGGTGCCACAGAGTCCCACCTAGAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| CDS-3UTR TCA 90 bp | GGTCAAAGATCATCCCATTCCAGACACACACCAAAACCGGAGTTGGATTTCCCTTACTCACATAAGACATaGAGCTGGCTCTCTGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GQRSSHSRHTPKPELDFPYSHKT*SWLSVV Trigger: GACCACAGAGAGCCAGCTTCATGTCTTATGTGAGTA...AGGGAAATCCAACTCCGGTTTTGGTGTGTGTCTGGAATGGGATGATCTTTGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142472.8 |
||
| CDS-3UTR GCA 90 bp | GATCCCTCACCAGATGGAACAATCAGACTGAAACGTCTACAAACTGGAATAAACGAGGCTCTGCAGGGGTaGCACACTAGGTACATGACA | + |
|
Preference number: 4 (lower is better) Translates to: DPSPDGTIRLKRLQTGINEALQG*HTRYMT Trigger: TGTCATGTACCTAGTGTGGCACCCCTGCAGAGCCTC...GTTTATTCCAGTTTGTAGACGTTTCAGTCTGATTGTTCCATCTGGTGAGGGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| CDS-3UTR CCA 90 bp | GACAGAACAGAGTCCCATCTGTGTGTTAAGCACACTGCCGTGGGGTTGAGTACTTATCTCCAGGATTGGTaGAGGGAAACTGTAGACATA | + |
|
Preference number: 4 (lower is better) Translates to: DRTESHLCVKHTAVGLSTYLQDW*RETVDI Trigger: TATGTCTACAGTTTCCCTCCACCAATCCTGGAGATA...AGTACTCAACCCCACGGCAGTGTGCTTAACACACAGATGGGACTCTGTTCTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| CDS-3UTR CCA 90 bp | GATAATGAAGATGGTGGAGGAGCTGATGCCCTCAGGCAGGCCTTGGACAATGATTATCTCCAGGATTGGTaGAGGGAAACTGTAGACATA | + |
|
Preference number: 4 (lower is better) Translates to: DNEDGGGADALRQALDNDYLQDW*RETVDI Trigger: TATGTCTACAGTTTCCCTCCACCAATCCTGGAGATA...ATCATTGTCCAAGGCCTGCCTGAGGGCATCAGCTCCTCCACCATCTTCATTATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142472.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGATCCCTCACCAGATGGAACAATCAGACTGAAACGTCTACAAACTGGAATCCGTGTGGTTCTGGGTaGCCTTCTGAGGTACATCAA | + |
|
Preference number: 4 (lower is better) Translates to: RGSLTRWNNQTETSTNWNPCGSG*PSEVHQ Trigger: TTGATGTACCTCAGAAGGCCACCCAGAACCACACGG...ATTCCAGTTTGTAGACGTTTCAGTCTGATTGTTCCATCTGGTGAGGGATCCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044462.4 |
||
| CDS-3UTR TCA 90 bp | GATCCCTCACCAGATGGAACAATCAGACTGAAACGTCTACAAACTGGAATAAACGGTATAATGCTACAGTaGTCACAGCCATGCCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: DPSPDGTIRLKRLQTGINGIMLQ*SQPCPG Trigger: CCCTGGGCATGGCTGTGATCACTGTAGCATTATACC...GTTTATTCCAGTTTGTAGACGTTTCAGTCTGATTGTTCCATCTGGTGAGGGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044462.4 |
||
| CDS-3UTR CCA 90 bp | ACATTACCAACTAAAAGCTATCCTCAAAGTTCTGAAACGCAACCATTTATGCTTAGGTCTCGATTCCACTaGGCCCAGGGTCTGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TLPTKSYPQSSETQPFMLRSRFH*AQGLGR Trigger: CCTGCCCAGACCCTGGGCCCAGTGGAATCGAGACCT...AAGCATAAATGGTTGCGTTTCAGAACTTTGAGGATAGCTTTTAGTTGGTAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044462.4 |
||
| CDS-3UTR CCA 90 bp | GATCCCTCACCAGATGGAACAATCAGACTGAAACGTCTACAAACTGGAATAAACGACAGCTTCCTGGGCTaGAAATACTCTGGTCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: DPSPDGTIRLKRLQTGINDSFLG*KYSGHL Trigger: GAGGTGACCAGAGTATTTCCAGCCCAGGAAGCTGTC...GTTTATTCCAGTTTGTAGACGTTTCAGTCTGATTGTTCCATCTGGTGAGGGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| CDS-3UTR CCA 90 bp | AACACAAGCTTCACTTACGATAACGGGAAAAGAAACTCATATTCACAAAGCCTACCATGGCCTGAATGGTaGCACTGGCCCACGCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: NTSFTYDNGKRNSYSQSLPWPEW*HWPTLH Trigger: ATGCAGCGTGGGCCAGTGCCACCATTCAGGCCATGG...TAGGCTTTGTGAATATGAGTTTCTTTTCCCGTTATCGTAAGTGAAGCTTGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044462.4 |
||
| CDS-3UTR CCA 90 bp | CATTCTAGGTGGGACTCTGTGGCACCGACAACGATGAAAACAGGCAATTCTTGTGTGACCTCGGCTCTTTaGGATACCAAAGATAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: HSRWDSVAPTTMKTGNSCVTSAL*DTKDKL Trigger: AAGTTTATCTTTGGTATCCCAAAGAGCCGAGGTCAC...ACAAGAATTGCCTGTTTTCATCGTTGTCGGTGCCACAGAGTCCCACCTAGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| CDS-3UTR CCA 90 bp | GATCCCTCACCAGATGGAACAATCAGACTGAAACGTCTACAAACTGGAATAAACGGGCTGGAAATACTCTaGTCACCTCACAGCTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: DPSPDGTIRLKRLQTGINGLEIL*SPHSSQ Trigger: TTGTGAGCTGTGAGGTGACCAGAGTATTTCCAGCCC...GTTTATTCCAGTTTGTAGACGTTTCAGTCTGATTGTTCCATCTGGTGAGGGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| 3UTR CAA 72 bp | GAAACCTTGGCTTGTCTTCCTGAGGGCAAGACAAGCTaGGTGAGAGTTCACTTTCTTTTCTTCTCTGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ETLACLPEGKTS*VRVHFLFFSGF Trigger: AAACCCAGAGAAGAAAAGAAAGTGAACTCTCACCAAGCTTGTCTTGCCCTCAGGAAGACAAGCCAAGGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142472.8 |
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| CDS-3UTR CCA 90 bp | ATGAGTGTGAGCTTTGGTTTTGAGAGCAGGAAAAACAGGCCACTGACTGGAACTGACCCTTTGCTTAGCTaGGTTTTCTTTAAGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: MSVSFGFESRKNRPLTGTDPLLS*VFFKKV Trigger: GACCTTCTTAAAGAAAACCCAGCTAAGCAAAGGGTC...AGTTCCAGTCAGTGGCCTGTTTTTCCTGCTCTCAAAACCAAAGCTCACACTCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044462.4 |
||
| CDS-3UTR CCA 90 bp | AACACAAGCTTCACTTACGATAACGGGAAAAGAAACTCATATTCACAAAGCCTAAGTTCTTGGTCACCCTaGAGGAGGGTAAGGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NTSFTYDNGKRNSYSQSLSSWSP*RRVRVR Trigger: CCTCACCCTTACCCTCCTCCAGGGTGACCAAGAACT...TAGGCTTTGTGAATATGAGTTTCTTTTCCCGTTATCGTAAGTGAAGCTTGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044462.4 |
||
| CDS-3UTR CCA 90 bp | GTGAGCCAGTCACAGAGAATTCCGGTGACAGAACAGAGTCCCATCTGTGTGTTAACTGTAGACATAAACTaGTTTCCTTGTTTTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VSQSQRIPVTEQSPICVLTVDIN*FPCFLL Trigger: GAGCAGAAAACAAGGAAACCAGTTTATGTCTACAGT...TAACACACAGATGGGACTCTGTTCTGTCACCGGAATTCTCTGTGACTGGCTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGATCCCTCACCAGATGGAACAATCAGACTGAAACGTCTACAAACTGGAATGTGACCTCGGCTCTTTaGGATACCAAAGATAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: RGSLTRWNNQTETSTNWNVTSAL*DTKDKL Trigger: AAGTTTATCTTTGGTATCCCAAAGAGCCGAGGTCAC...ATTCCAGTTTGTAGACGTTTCAGTCTGATTGTTCCATCTGGTGAGGGATCCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| CDS-3UTR CCA 90 bp | TCACAGAGAATTCCGGTGACAGAACAGAGTCCCATCTGTGTGTTAAGCACACTGACTGTAGACATAAACTaGTTTCCTTGTTTTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SQRIPVTEQSPICVLSTLTVDIN*FPCFLL Trigger: GAGCAGAAAACAAGGAAACCAGTTTATGTCTACAGT...CAGTGTGCTTAACACACAGATGGGACTCTGTTCTGTCACCGGAATTCTCTGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| 3UTR CAA 72 bp | GAGTACGGTCAGGGGAAGAGTTCTAATTCCTGCCTATaGATTTGTTATCCTATGTATGAAGTCTTGTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: EYGQGKSSNSCL*ICYPMYEVLSL Trigger: CAGGGACAAGACTTCATACATAGGATAACAAATCAATAGGCAGGAATTAGAACTCTTCCCCTGACCGTACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| CDS-3UTR TCA 90 bp | ACATTACCAACTAAAAGCTATCCTCAAAGTTCTGAAACGCAACCATTTATGCTTGCACCAAGTCCTCTGTaGTGTCCTCCAGGAGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: TLPTKSYPQSSETQPFMLAPSPL*CPPGET Trigger: AGTTTCTCCTGGAGGACATCACAGAGGACTTGGTGC...AAGCATAAATGGTTGCGTTTCAGAACTTTGAGGATAGCTTTTAGTTGGTAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044462.4 |
||
| CDS-3UTR TCA 90 bp | ACATTACCAACTAAAAGCTATCCTCAAAGTTCTGAAACGCAACCATTTATGCTTTGGTTTAGGGATCCCTaGAGCCGAAGAGTAGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: TLPTKSYPQSSETQPFMLWFRDP*SRRVGL Trigger: TAGCCCTACTCTTCGGCTTCAGGGATCCCTAAACCA...AAGCATAAATGGTTGCGTTTCAGAACTTTGAGGATAGCTTTTAGTTGGTAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044462.4 |
||
| CDS-3UTR GCA 90 bp | AACACAAGCTTCACTTACGATAACGGGAAAAGAAACTCATATTCACAAAGCCTAAGGAAGTCTTTTCTGTaGAGTTCTTGGTCACCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NTSFTYDNGKRNSYSQSLRKSFL*SSWSPW Trigger: CCAGGGTGACCAAGAACTGCACAGAAAAGACTTCCT...TAGGCTTTGTGAATATGAGTTTCTTTTCCCGTTATCGTAAGTGAAGCTTGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044462.4 |
||
| CDS CCA 90 bp | GCCACCCATTCAGGCTGCAGGTCCAGTATCACCTGCTCTGGTGGCTaGTACATGGTGATAGCGAGCACGGTGTCCTTCTGCTCCCCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: ATHSGCRSSITCSGG*YMVIASTVSFCSPA Trigger: TGCAGGGGAGCAGAAGGACACCGTGCTCGCTATCACCATGTACCAGCCACCAGAGCAGGTGATACTGGACCTGCAGCCTGAATGGGTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| CDS CCA 90 bp | CAAGGCAAGTCAGTTCCTGGTCACCAGTCTCCATGGCCTGAATGGTaGCACTGGCCCACGCTGCATCTTCCCTCCAGGACGAGAAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: QGKSVPGHQSPWPEW*HWPTLHLPSRTRKG Trigger: GCCCTTTCTCGTCCTGGAGGGAAGATGCAGCGTGGGCCAGTGCCACCATTCAGGCCATGGAGACTGGTGACCAGGAACTGACTTGCCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| CDS CCA 90 bp | GACCCAGAGACACAAGGCAAGTCAGTTCCTGGTCACCAGTCTCCATaGCCTGAATGGTGGCACTGGCCCACGCTGCATCTTCCCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: DPETQGKSVPGHQSP*PEWWHWPTLHLPSR Trigger: CCTGGAGGGAAGATGCAGCGTGGGCCAGTGCCACCATTCAGGCCATGGAGACTGGTGACCAGGAACTGACTTGCCTTGTGTCTCTGGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| CDS TCA 90 bp | AGGAGGGTAAGGGTGAGGCTCTGCAGGGGTGCCACACTAGGTACATaGCACGTGACTGTGAAGGCTTCATCCACGGCCACCCATTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RRVRVRLCRGATLGT*HVTVKASSTATHSG Trigger: GCCTGAATGGGTGGCCGTGGATGAAGCCTTCACAGTCACGTGTCATGTACCTAGTGTGGCACCCCTGCAGAGCCTCACCCTTACCCTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| CDS TCA 90 bp | AGAGACACAAGGCAAGTCAGTTCCTGGTCACCAGTCTCCATGGCCTaGATGGTGGCACTGGCCCACGCTGCATCTTCCCTCCAGGACGAG | + |
|
Preference number: 5 (lower is better) Translates to: RDTRQVSSWSPVSMA*MVALAHAASSLQDE Trigger: CTCGTCCTGGAGGGAAGATGCAGCGTGGGCCAGTGCCACCATTCAGGCCATGGAGACTGGTGACCAGGAACTGACTTGCCTTGTGTCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| CDS CCA 90 bp | ATCCACGGCCACCCATTCAGGCTGCAGGTCCAGTATCACCTGCTCTaGTGGCTGGTACATGGTGATAGCGAGCACGGTGTCCTTCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: IHGHPFRLQVQYHLL*WLVHGDSEHGVLLL Trigger: GAGCAGAAGGACACCGTGCTCGCTATCACCATGTACCAGCCACCAGAGCAGGTGATACTGGACCTGCAGCCTGAATGGGTGGCCGTGGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| CDS CCA 90 bp | GCCCACGCTGCATCTTCCCTCCAGGACGAGAAAGGGCTCAGCTCCTaGTCTTCCAGGAACATTCGGAAGACAGCTTCCTGGGCTGGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: AHAASSLQDEKGLSS*SSRNIRKTASWAGN Trigger: ATTTCCAGCCCAGGAAGCTGTCTTCCGAATGTTCCTGGAAGACCAGGAGCTGAGCCCTTTCTCGTCCTGGAGGGAAGATGCAGCGTGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
||
| CDS CCA 90 bp | TCCAGTTCTGCTCGGCAGGAGAAATTACGCCTGTCATTGTCCCGGTaGGCTCTGACAGTGGCGGTGACCTCGGCTCTTTGGGATACCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SSSARQEKLRLSLSR*ALTVAVTSALWDTK Trigger: TTTGGTATCCCAAAGAGCCGAGGTCACCGCCACTGTCAGAGCCCACCGGGACAATGACAGGCGTAATTTCTCCTGCCGAGCAGAACTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| CDS TCA 90 bp | TCTCGATTCCACTGGGCCCAGGGTCTGGGCAGGTGGTACTGCAGTTaGCAGTTAGGGAGTGTCCAAACTCTACCAGGGCCTCATTTGGAT | + |
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Preference number: 5 (lower is better) Translates to: SRFHWAQGLGRWYCS*QLGSVQTLPGPHLD Trigger: ATCCAAATGAGGCCCTGGTAGAGTTTGGACACTCCCTAACTGTCAACTGCAGTACCACCTGCCCAGACCCTGGGCCCAGTGGAATCGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| CDS GCA 90 bp | TGGCTGGTACATGGTGATAGCGAGCACGGTGTCCTTCTGCTCCCCTaGACAAGAGAAGAAGCACTGCAGCACCAAGTCCTCTGTGATGTC | + |
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Preference number: 5 (lower is better) Translates to: WLVHGDSEHGVLLLP*TREEALQHQVLCDV Trigger: GACATCACAGAGGACTTGGTGCTGCAGTGCTTCTTCTCTTGTGCAGGGGAGCAGAAGGACACCGTGCTCGCTATCACCATGTACCAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| CDS CCA 90 bp | GGGCTCAGCTCCTGGTCTTCCAGGAACATTCGGAAGACAGCTTCCTaGGCTGGAAATACTCTGGTCACCTCACAGCTCACAATCTCTGCC | + |
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Preference number: 5 (lower is better) Translates to: GLSSWSSRNIRKTAS*AGNTLVTSQLTISA Trigger: GGCAGAGATTGTGAGCTGTGAGGTGACCAGAGTATTTCCAGCCCAGGAAGCTGTCTTCCGAATGTTCCTGGAAGACCAGGAGCTGAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| CDS-3UTR CAA 90 bp | TTGTCTCCGCCTTCCTCCTTGGCCCGCTCTTGCGTCCCTGTAAATGCTGGTAGCCTTCTATCTCCAGGATaGGTGGAGGGAAACTGTAGA | + |
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Preference number: 5 (lower is better) Translates to: LSPPSSLARSCVPVNAGSLLSPG*VEGNCR Trigger: TCTACAGTTTCCCTCCACCAATCCTGGAGATAGAAG...GCTACCAGCATTTACAGGGACGCAAGAGCGGGCCAAGGAGGAAGGCGGAGACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| CDS-3UTR CAA 90 bp | CCGGAGTTGGATTTCCCTCTGGGATGCAGGCAAGCATCTGATGCATCCCTTCTATTTTCTGTGCAGTTCTaGGTCACCCTGGAGGAGGGT | + |
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Preference number: 5 (lower is better) Translates to: PELDFPLGCRQASDASLLFSVQF*VTLEEG Trigger: ACCCTCCTCCAGGGTGACCAAGAACTGCACAGAAAA...TAGAAGGGATGCATCAGATGCTTGCCTGCATCCCAGAGGGAAATCCAACTCCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142472.8 |
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| CDS CCA 90 bp | ATGTCCTCCAGGAGAAACTCCTTCCACTGGGACCCTTTGCTTAGCTaGGTTTTCTTTAAGAAGGTCTCGATTCCACTGGGCCCAGGGTCT | + |
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Preference number: 5 (lower is better) Translates to: MSSRRNSFHWDPLLS*VFFKKVSIPLGPGS Trigger: AGACCCTGGGCCCAGTGGAATCGAGACCTTCTTAAAGAAAACCCAGCTAAGCAAAGGGTCCCAGTGGAAGGAGTTTCTCCTGGAGGACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| CDS-3UTR CAA 90 bp | GACAGAACAGAGTCCCATCTGTGTGTTAAGCACACTGCCGTGGGGTTGAGTACTTTTTCTGTGCAGTTCTaGGTCACCCTGGAGGAGGGT | + |
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Preference number: 5 (lower is better) Translates to: DRTESHLCVKHTAVGLSTFSVQF*VTLEEG Trigger: ACCCTCCTCCAGGGTGACCAAGAACTGCACAGAAAA...AGTACTCAACCCCACGGCAGTGTGCTTAACACACAGATGGGACTCTGTTCTGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| CDS GCA 90 bp | GGATGCAGGCAAGCATCTGATGCATCCCTTCTACCCATATCTGGTTaGCAGGGCAGCGGGATTCCTGAAACCTTGGCTTGTATAAGACAT | + |
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Preference number: 5 (lower is better) Translates to: GCRQASDASLLPISG*QGSGIPETLACIRH Trigger: ATGTCTTATACAAGCCAAGGTTTCAGGAATCCCGCTGCCCTGGCAACCAGATATGGGTAGAAGGGATGCATCAGATGCTTGCCTGCATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044462.4 |
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| CDS CCA 90 bp | AAAGATAAACTTAGGAAGTCTTTTCTGTGCAGTTCTTGGTCACCCTaGAGGAGGGTAAGGGTGAGGCTCTGCAGGGGTGCCACACTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: KDKLRKSFLCSSWSP*RRVRVRLCRGATLG Trigger: ACCTAGTGTGGCACCCCTGCAGAGCCTCACCCTTACCCTCCTCCAGGGTGACCAAGAACTGCACAGAAAAGACTTCCTAAGTTTATCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| CDS GCA 90 bp | TCGGCTCTTTGGGATACCAAAGATAAACTTAGGAAGTCTTTTCTGTaGAGTTCTTGGTCACCCTGGAGGAGGGTAAGGGTGAGGCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SALWDTKDKLRKSFL*SSWSPWRRVRVRLC Trigger: GCAGAGCCTCACCCTTACCCTCCTCCAGGGTGACCAAGAACTGCACAGAAAAGACTTCCTAAGTTTATCTTTGGTATCCCAAAGAGCCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| CDS-3UTR CAA 90 bp | ATGAGAGGCCAGGCCAGAGCCTTCTGTGTGCCTGAGAGTGACCTAGTTAAATACTTCCACTGGGACCCTTaGCTTAGCTGGGTTTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: MRGQARAFCVPESDLVKYFHWDP*LSWVFF Trigger: AAAGAAAACCCAGCTAAGCAAAGGGTCCCAGTGGAA...GTATTTAACTAGGTCACTCTCAGGCACACAGAAGGCTCTGGCCTGGCCTCTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| CDS CCA 90 bp | AGCACCAAGTCCTCTGTGATGTCCTCCAGGAGAAACTCCTTCCACTaGGACCCTTTGCTTAGCTGGGTTTTCTTTAAGAAGGTCTCGATT | + |
|
Preference number: 5 (lower is better) Translates to: STKSSVMSSRRNSFH*DPLLSWVFFKKVSI Trigger: AATCGAGACCTTCTTAAAGAAAACCCAGCTAAGCAAAGGGTCCCAGTGGAAGGAGTTTCTCCTGGAGGACATCACAGAGGACTTGGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| CDS CCA 90 bp | GTCCGTCCCTGCCAGAGGGTAAGCATCTTCTATCTCCAGGATTGGTaGAGGGAAACTGTAGACATAAACTGGTTTCCTTGTTTTCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VRPCQRVSIFYLQDW*RETVDINWFPCFLL Trigger: GAGCAGAAAACAAGGAAACCAGTTTATGTCTACAGTTTCCCTCCACCAATCCTGGAGATAGAAGATGCTTACCCTCTGGCAGGGACGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| CDS CCA 90 bp | ATCTTCTATCTCCAGGATTGGTGGAGGGAAACTGTAGACATAAACTaGTTTCCTTGTTTTCTGCTCCACGGGACCCAGAGACACAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: IFYLQDWWRETVDIN*FPCFLLHGTQRHKA Trigger: TGCCTTGTGTCTCTGGGTCCCGTGGAGCAGAAAACAAGGAAACCAGTTTATGTCTACAGTTTCCCTCCACCAATCCTGGAGATAGAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| CDS-3UTR CAA 90 bp | TCACAGAGAATTCCGGTGACAGAACAGAGTCCCATCTGTGTGTTAAGCACACTGTTCCACTGGGACCCTTaGCTTAGCTGGGTTTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SQRIPVTEQSPICVLSTLFHWDP*LSWVFF Trigger: AAAGAAAACCCAGCTAAGCAAAGGGTCCCAGTGGAA...CAGTGTGCTTAACACACAGATGGGACTCTGTTCTGTCACCGGAATTCTCTGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| CDS-3UTR CAA 90 bp | GACAGAACAGAGTCCCATCTGTGTGTTAAGCACACTGCCGTGGGGTTGAGTACTGGGATTCCTGAAACCTaGGCTTGTATAAGACATGAA | + |
|
Preference number: 5 (lower is better) Translates to: DRTESHLCVKHTAVGLSTGIPET*ACIRHE Trigger: TTCATGTCTTATACAAGCCAAGGTTTCAGGAATCCC...AGTACTCAACCCCACGGCAGTGTGCTTAACACACAGATGGGACTCTGTTCTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044462.4 |
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| CDS CCA 72 bp | CCTGGTCACCAGTCTCCATGGCCTGAATGGTGGCACTaGCCCACGCTGCATCTTCCCTCCAGGACGAGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: PGHQSPWPEWWH*PTLHLPSRTRK Trigger: CTTTCTCGTCCTGGAGGGAAGATGCAGCGTGGGCCAGTGCCACCATTCAGGCCATGGAGACTGGTGACCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| CDS CCA 72 bp | TCAGTTCCTGGTCACCAGTCTCCATGGCCTGAATGGTaGCACTGGCCCACGCTGCATCTTCCCTCCAGGACG | + |
|
Preference number: 6 (lower is better) Translates to: SVPGHQSPWPEW*HWPTLHLPSRT Trigger: CGTCCTGGAGGGAAGATGCAGCGTGGGCCAGTGCCACCATTCAGGCCATGGAGACTGGTGACCAGGAACTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| CDS TCA 72 bp | CACTGGGCCCAGGGTCTGGGCAGGTGGTACTGCAGTTaGCAGTTAGGGAGTGTCCAAACTCTACCAGGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: HWAQGLGRWYCS*QLGSVQTLPGP Trigger: AGGCCCTGGTAGAGTTTGGACACTCCCTAACTGTCAACTGCAGTACCACCTGCCCAGACCCTGGGCCCAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| CDS TCA 72 bp | AGGGTGAGGCTCTGCAGGGGTGCCACACTAGGTACATaGCACGTGACTGTGAAGGCTTCATCCACGGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: RVRLCRGATLGT*HVTVKASSTAT Trigger: GGTGGCCGTGGATGAAGCCTTCACAGTCACGTGTCATGTACCTAGTGTGGCACCCCTGCAGAGCCTCACCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| CDS CCA 72 bp | AAGTCAGTTCCTGGTCACCAGTCTCCATGGCCTGAATaGTGGCACTGGCCCACGCTGCATCTTCCCTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: KSVPGHQSPWPE*WHWPTLHLPSR Trigger: CCTGGAGGGAAGATGCAGCGTGGGCCAGTGCCACCATTCAGGCCATGGAGACTGGTGACCAGGAACTGACTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| CDS GCA 72 bp | ACTGTGAAGGCTTCATCCACGGCCACCCATTCAGGCTaGAGGTCCAGTATCACCTGCTCTGGTGGCTGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: TVKASSTATHSG*RSSITCSGGWY Trigger: GTACCAGCCACCAGAGCAGGTGATACTGGACCTGCAGCCTGAATGGGTGGCCGTGGATGAAGCCTTCACAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| CDS CCA 72 bp | CACCCATTCAGGCTGCAGGTCCAGTATCACCTGCTCTaGTGGCTGGTACATGGTGATAGCGAGCACGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: HPFRLQVQYHLL*WLVHGDSEHGV Trigger: GACACCGTGCTCGCTATCACCATGTACCAGCCACCAGAGCAGGTGATACTGGACCTGCAGCCTGAATGGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| CDS CAA 90 bp | GTCTCGATTCCACTGGGCCCAGGGTCTGGGCAGGTGGTACTGCAGTaGACAGTTAGGGAGTGTCCAAACTCTACCAGGGCCTCATTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: VSIPLGPGSGQVVLQ*TVRECPNSTRASFG Trigger: TCCAAATGAGGCCCTGGTAGAGTTTGGACACTCCCTAACTGTCAACTGCAGTACCACCTGCCCAGACCCTGGGCCCAGTGGAATCGAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| CDS TCA 72 bp | AACTCTACCAGGGCCTCATTTGGATGGACAGATACCTaGAACAGCTCCTCGGCGGCCCCTGGACAAGGGATC | + |
|
Preference number: 6 (lower is better) Translates to: NSTRASFGWTDT*NSSSAAPGQGI Trigger: GATCCCTTGTCCAGGGGCCGCCGAGGAGCTGTTTCAGGTATCTGTCCATCCAAATGAGGCCCTGGTAGAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| CDS CCA 72 bp | CCATTCAGGCTGCAGGTCCAGTATCACCTGCTCTGGTaGCTGGTACATGGTGATAGCGAGCACGGTGTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: PFRLQVQYHLLW*LVHGDSEHGVL Trigger: AAGGACACCGTGCTCGCTATCACCATGTACCAGCCACCAGAGCAGGTGATACTGGACCTGCAGCCTGAATGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| CDS CCA 72 bp | GCATCTTCCCTCCAGGACGAGAAAGGGCTCAGCTCCTaGTCTTCCAGGAACATTCGGAAGACAGCTTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: ASSLQDEKGLSS*SSRNIRKTASW Trigger: CCAGGAAGCTGTCTTCCGAATGTTCCTGGAAGACCAGGAGCTGAGCCCTTTCTCGTCCTGGAGGGAAGATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| CDS CCA 72 bp | ACACAAGGCAAGTCAGTTCCTGGTCACCAGTCTCCATaGCCTGAATGGTGGCACTGGCCCACGCTGCATCTT | + |
|
Preference number: 6 (lower is better) Translates to: TQGKSVPGHQSP*PEWWHWPTLHL Trigger: AAGATGCAGCGTGGGCCAGTGCCACCATTCAGGCCATGGAGACTGGTGACCAGGAACTGACTTGCCTTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| CDS TCA 72 bp | CACAAGAGAAGAAGCACTGCAGCACCAAGTCCTCTGTaGTGTCCTCCAGGAGAAACTCCTTCCACTGGGACC | + |
|
Preference number: 6 (lower is better) Translates to: HKRRSTAAPSPL*CPPGETPSTGT Trigger: GGTCCCAGTGGAAGGAGTTTCTCCTGGAGGACATCACAGAGGACTTGGTGCTGCAGTGCTTCTTCTCTTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| CDS CAA 90 bp | TCCTCTGTGATGTCCTCCAGGAGAAACTCCTTCCACTGGGACCCTTaGCTTAGCTGGGTTTTCTTTAAGAAGGTCTCGATTCCACTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SSVMSSRRNSFHWDP*LSWVFFKKVSIPLG Trigger: GCCCAGTGGAATCGAGACCTTCTTAAAGAAAACCCAGCTAAGCAAAGGGTCCCAGTGGAAGGAGTTTCTCCTGGAGGACATCACAGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| CDS CAA 72 bp | ATATCTGGTTGCCAGGGCAGCGGGATTCCTGAAACCTaGGCTTGTATAAGACATGAAGCTGGCTCTCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: ISGCQGSGIPET*ACIRHEAGSLW Trigger: CCACAGAGAGCCAGCTTCATGTCTTATACAAGCCAAGGTTTCAGGAATCCCGCTGCCCTGGCAACCAGATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044462.4 |
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| CDS CCA 72 bp | CTCCAGGATTGGTGGAGGGAAACTGTAGACATAAACTaGTTTCCTTGTTTTCTGCTCCACGGGACCCAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: LQDWWRETVDIN*FPCFLLHGTQR Trigger: TCTCTGGGTCCCGTGGAGCAGAAAACAAGGAAACCAGTTTATGTCTACAGTTTCCCTCCACCAATCCTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| CDS CAA 90 bp | TCTCCAGGATTGGTGGAGGGAAACTGTAGACATAAACTGGTTTCCTaGTTTTCTGCTCCACGGGACCCAGAGACACAAGGCAAGTCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: SPGLVEGNCRHKLVS*FSAPRDPETQGKSV Trigger: AACTGACTTGCCTTGTGTCTCTGGGTCCCGTGGAGCAGAAAACAAGGAAACCAGTTTATGTCTACAGTTTCCCTCCACCAATCCTGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| CDS GCA 72 bp | TGTCCTCCAGGAGAAACTCCTTCCACTGGGACCCTTTaGTTAGCTGGGTTTTCTTTAAGAAGGTCTCGATTC | + |
|
Preference number: 6 (lower is better) Translates to: CPPGETPSTGTL*LAGFSLRRSRF Trigger: GAATCGAGACCTTCTTAAAGAAAACCCAGCTAAGCAAAGGGTCCCAGTGGAAGGAGTTTCTCCTGGAGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| CDS CCA 72 bp | TCCTCTGTGATGTCCTCCAGGAGAAACTCCTTCCACTaGGACCCTTTGCTTAGCTGGGTTTTCTTTAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SSVMSSRRNSFH*DPLLSWVFFKK Trigger: CTTCTTAAAGAAAACCCAGCTAAGCAAAGGGTCCCAGTGGAAGGAGTTTCTCCTGGAGGACATCACAGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| CDS CCA 72 bp | CCCTGCCAGAGGGTAAGCATCTTCTATCTCCAGGATTaGTGGAGGGAAACTGTAGACATAAACTGGTTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PCQRVSIFYLQD*WRETVDINWFP Trigger: AGGAAACCAGTTTATGTCTACAGTTTCCCTCCACCAATCCTGGAGATAGAAGATGCTTACCCTCTGGCAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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| CDS CCA 72 bp | TGCCAGAGGGTAAGCATCTTCTATCTCCAGGATTGGTaGAGGGAAACTGTAGACATAAACTGGTTTCCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: CQRVSIFYLQDW*RETVDINWFPC Trigger: ACAAGGAAACCAGTTTATGTCTACAGTTTCCCTCCACCAATCCTGGAGATAGAAGATGCTTACCCTCTGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044462.4 ENSMUST00000142472.8 |
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