Pregenerated sensors for TCAIM (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046603Ensembl transcript IDs: ENSMUST00000052740.14, ENSMUST00000136274.3
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTTTCACATTCTGAAGTGGCCCCGGATTCTGCTGTGCTAGGCGGCTaGGACTGTGCAGCTGGCTGCAGCGATGGGCAACTCCCCAGCCTC | + |
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Preference number: 1 (lower is better) Translates to: LSHSEVAPDSAVLGG*DCAAGCSDGQLPSL Trigger: GAGGCTGGGGAGTTGCCCATCGCTGCAGCCAGCTGCACAGTCTCAGCCGCCTAGCACAGCAGAATCCGGGGCCACTTCAGAATGTGAAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
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| 3UTR CCA 90 bp | TTCTGCTGTGCTAGGCGGCTGAGACTGTGCAGCTGGCTGCAGCGATaGGCAACTCCCCAGCCTCTCTGCCACCTGATGTCTGAAAGCTGC | + |
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Preference number: 1 (lower is better) Translates to: FCCARRLRLCSWLQR*ATPQPLCHLMSESC Trigger: GCAGCTTTCAGACATCAGGTGGCAGAGAGGCTGGGGAGTTGCCCATCGCTGCAGCCAGCTGCACAGTCTCAGCCGCCTAGCACAGCAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
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| 3UTR TCA 90 bp | GCAGCTGGCTGCAGCGATGGGCAACTCCCCAGCCTCTCTGCCACCTaGTGTCTGAAAGCTGCAGAAGCTCAGACAGCTCATTCTTCAGGC | + |
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Preference number: 1 (lower is better) Translates to: AAGCSDGQLPSLSAT*CLKAAEAQTAHSSG Trigger: GCCTGAAGAATGAGCTGTCTGAGCTTCTGCAGCTTTCAGACATCAGGTGGCAGAGAGGCTGGGGAGTTGCCCATCGCTGCAGCCAGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
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| 3UTR TCA 90 bp | GCTGCAGCGATGGGCAACTCCCCAGCCTCTCTGCCACCTGATGTCTaGAAGCTGCAGAAGCTCAGACAGCTCATTCTTCAGGCGATCCAG | + |
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Preference number: 1 (lower is better) Translates to: AAAMGNSPASLPPDV*KLQKLRQLILQAIQ Trigger: CTGGATCGCCTGAAGAATGAGCTGTCTGAGCTTCTGCAGCTTTCAGACATCAGGTGGCAGAGAGGCTGGGGAGTTGCCCATCGCTGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
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| 3UTR GCA 90 bp | CGATGGGCAACTCCCCAGCCTCTCTGCCACCTGATGTCTGAAAGCTaGAGAAGCTCAGACAGCTCATTCTTCAGGCGATCCAGCTCCTTC | + |
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Preference number: 1 (lower is better) Translates to: RWATPQPLCHLMSES*RSSDSSFFRRSSSF Trigger: GAAGGAGCTGGATCGCCTGAAGAATGAGCTGTCTGAGCTTCTGCAGCTTTCAGACATCAGGTGGCAGAGAGGCTGGGGAGTTGCCCATCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
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| 3UTR CCA 90 bp | AGCCTTGTCCAGTGGTGGTGGACATCCATGGTTCCCAGCATCACATaGCCCAGTGCACTCATACCGGAGCGGTCTGTGAATACAACCGTG | + |
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Preference number: 1 (lower is better) Translates to: SLVQWWWTSMVPSIT*PSALIPERSVNTTV Trigger: CACGGTTGTATTCACAGACCGCTCCGGTATGAGTGCACTGGGCCATGTGATGCTGGGAACCATGGATGTCCACCACCACTGGACAAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
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| 3UTR TCA 90 bp | ATACCGGAGCGGTCTGTGAATACAACCGTGCATCCTTTCACATTCTaGAGTGGCCCCGGATTCTGCTGTGCTAGGCGGCTGAGACTGTGC | + |
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Preference number: 1 (lower is better) Translates to: IPERSVNTTVHPFTF*SGPGFCCARRLRLC Trigger: GCACAGTCTCAGCCGCCTAGCACAGCAGAATCCGGGGCCACTTCAGAATGTGAAAGGATGCACGGTTGTATTCACAGACCGCTCCGGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
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| 3UTR GCA 90 bp | CCAGTGGTGGTGGACATCCATGGTTCCCAGCATCACATGGCCCAGTaGACTCATACCGGAGCGGTCTGTGAATACAACCGTGCATCCTTT | + |
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Preference number: 1 (lower is better) Translates to: PVVVDIHGSQHHMAQ*THTGAVCEYNRASF Trigger: AAAGGATGCACGGTTGTATTCACAGACCGCTCCGGTATGAGTGCACTGGGCCATGTGATGCTGGGAACCATGGATGTCCACCACCACTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
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| 3UTR TCA 90 bp | TTCCCAGCATCACATGGCCCAGTGCACTCATACCGGAGCGGTCTGTaGATACAACCGTGCATCCTTTCACATTCTGAAGTGGCCCCGGAT | + |
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Preference number: 1 (lower is better) Translates to: FPASHGPVHSYRSGL*IQPCILSHSEVAPD Trigger: ATCCGGGGCCACTTCAGAATGTGAAAGGATGCACGGTTGTATTCACAGACCGCTCCGGTATGAGTGCACTGGGCCATGTGATGCTGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
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| 3UTR CCA 90 bp | TTGGCAAGCTTTCAAAAAGCCTTGTCCAGTGGTGGTGGACATCCATaGTTCCCAGCATCACATGGCCCAGTGCACTCATACCGGAGCGGT | + |
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Preference number: 1 (lower is better) Translates to: LASFQKALSSGGGHP*FPASHGPVHSYRSG Trigger: ACCGCTCCGGTATGAGTGCACTGGGCCATGTGATGCTGGGAACCATGGATGTCCACCACCACTGGACAAGGCTTTTTGAAAGCTTGCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
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| 3UTR TCA 90 bp | CTGCTGGGCTTTGGTTCTCATGAAGGACTGCAGGCTTGCTGGATCTaGGAGGGCTGGGATATCAAAATGCCCGAGTTCATGCAAGCTTGG | + |
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Preference number: 1 (lower is better) Translates to: LLGFGSHEGLQACWI*EGWDIKMPEFMQAW Trigger: CCAAGCTTGCATGAACTCGGGCATTTTGATATCCCAGCCCTCTCAGATCCAGCAAGCCTGCAGTCCTTCATGAGAACCAAAGCCCAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
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| 3UTR TCA 90 bp | CACCTGAGAGCGAGCCATAGCACAGGGCTCTGCCTGGGCCAGAGCTaGAGAAGTGAAGAAAGCTTTTTAAGGAGCTTCAGGCTAAGTTAT | + |
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Preference number: 1 (lower is better) Translates to: HLRASHSTGLCLGQS*RSEESFLRSFRLSY Trigger: ATAACTTAGCCTGAAGCTCCTTAAAAAGCTTTCTTCACTTCTTCAGCTCTGGCCCAGGCAGAGCCCTGTGCTATGGCTCGCTCTCAGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052740.14 ENSMUST00000136274.3 |
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| 3UTR GCA 90 bp | GAAGTGGCAGACTGTTCCTCAGCTTCTTCACGGCACCTTTCCCATTaGTACCTAACCAGGACGTTAGGGTTGTTTCCACTCTTGAGACGT | + |
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Preference number: 1 (lower is better) Translates to: EVADCSSASSRHLSH*YLTRTLGLFPLLRR Trigger: ACGTCTCAAGAGTGGAAACAACCCTAACGTCCTGGTTAGGTAGCAATGGGAAAGGTGCCGTGAAGAAGCTGAGGAACAGTCTGCCACTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
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| 3UTR GCA 90 bp | CTTGCTGGATCTGAGAGGGCTGGGATATCAAAATGCCCGAGTTCATaGAAGCTTGGCGCATACCTGTCACTGCTAAGGATCATCTGCAAG | + |
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Preference number: 1 (lower is better) Translates to: LAGSERAGISKCPSS*KLGAYLSLLRIICK Trigger: CTTGCAGATGATCCTTAGCAGTGACAGGTATGCGCCAAGCTTGCATGAACTCGGGCATTTTGATATCCCAGCCCTCTCAGATCCAGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
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| 3UTR TCA 90 bp | GCTGGTTGTAGAAGGTGTGGAGGAGAGAGTAGTACTGATCAAGTGTaGGTGCTGGCTGCAACTCTTCGATATAAACCACTTGGATTCCCC | + |
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Preference number: 1 (lower is better) Translates to: AGCRRCGGESSTDQV*VLAATLRYKPLGFP Trigger: GGGGAATCCAAGTGGTTTATATCGAAGAGTTGCAGCCAGCACTCACACTTGATCAGTACTACTCTCTCCTCCACACCTTCTACAACCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
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| 3UTR-3UTR CCA 90 bp | GGGGCGGCACCCTGCTTCTCAGCAGCTGGTTGTAGAAGGTGTGGAGGAGAGAGTAGCCTTGTCCAGTGGTaGTGGACATCCATGGTTCCC | + |
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Preference number: 2 (lower is better) Translates to: GAAPCFSAAGCRRCGGESSLVQW*WTSMVP Trigger: GGGAACCATGGATGTCCACCACCACTGGACAAGGCT...ACTCTCTCCTCCACACCTTCTACAACCAGCTGCTGAGAAGCAGGGTGCCGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
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| 3UTR-3UTR TCA 90 bp | GGGGCGGCACCCTGCTTCTCAGCAGCTGGTTGTAGAAGGTGTGGAGGAGAGAGTAGCCTCTCTGCCACCTaGTGTCTGAAAGCTGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: GAAPCFSAAGCRRCGGESSLSAT*CLKAAE Trigger: TTCTGCAGCTTTCAGACATCAGGTGGCAGAGAGGCT...ACTCTCTCCTCCACACCTTCTACAACCAGCTGCTGAGAAGCAGGGTGCCGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
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| 3UTR-3UTR TCA 90 bp | GTTCCCAGCATCACATGGCCCAGTGCACTCATACCGGAGCGGTCTGTGAATACACTGCCACCTGATGTCTaGAAGCTGCAGAAGCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: VPSITWPSALIPERSVNTLPPDV*KLQKLR Trigger: TCTGAGCTTCTGCAGCTTTCAGACATCAGGTGGCAG...TGTATTCACAGACCGCTCCGGTATGAGTGCACTGGGCCATGTGATGCTGGGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
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| 3UTR-3UTR TCA 90 bp | AGAGGGCTGGGATATCAAAATGCCCGAGTTCATGCAAGCTTGGCGCATACCTGTCTCTTGAGACGTGTGTaGGGTCTTCATCAGGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: RGLGYQNARVHASLAHTCLLRRV*GLHQGP Trigger: AGGACCCTGATGAAGACCTCACACACGTCTCAAGAG...ACAGGTATGCGCCAAGCTTGCATGAACTCGGGCATTTTGATATCCCAGCCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
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| 3UTR-3UTR TCA 90 bp | AGTATTTACAGCAACATTTGTCACATTAGCATGGGTCAAAAGCCACAATGGCACGCTGTGCTAGGCGGCTaGGACTGTGCAGCTGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: SIYSNICHISMGQKPQWHAVLGG*DCAAGC Trigger: GCAGCCAGCTGCACAGTCTCAGCCGCCTAGCACAGC...GTGCCATTGTGGCTTTTGACCCATGCTAATGTGACAAATGTTGCTGTAAATACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
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| 3UTR-3UTR TCA 90 bp | AGTATTTACAGCAACATTTGTCACATTAGCATGGGTCAAAAGCCACAATGGCACTGTGCAGGAGACAGCTaGGCACAAAGGAGGCCATGC | + |
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Preference number: 2 (lower is better) Translates to: SIYSNICHISMGQKPQWHCAGDS*AQRRPC Trigger: GCATGGCCTCCTTTGTGCTCAGCTGTCTCCTGCACA...GTGCCATTGTGGCTTTTGACCCATGCTAATGTGACAAATGTTGCTGTAAATACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052740.14 ENSMUST00000136274.3 |
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| 3UTR-3UTR GCA 90 bp | AGAGCAGGCCTCTCACTGTGCAGGAGACAGCTGAGCACAAAGGAGGCCATGCTTTGGTTATTTAACTTTTaGTACTTGCCAGTCATCTGT | + |
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Preference number: 2 (lower is better) Translates to: RAGLSLCRRQLSTKEAMLWLFNF*YLPVIC Trigger: ACAGATGACTGGCAAGTAGCAAAAGTTAAATAACCA...AAGCATGGCCTCCTTTGTGCTCAGCTGTCTCCTGCACAGTGAGAGGCCTGCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052740.14 ENSMUST00000136274.3 |
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| 3UTR-3UTR GCA 90 bp | ACACGGTACAATCCAAGCAATTTTCTAATAAATGTCAGGTTTGACGGCCCCACCTCACAGAGATCCACCTaGCTCTGCTTCCCAAGAGCT | + |
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Preference number: 2 (lower is better) Translates to: TRYNPSNFLINVRFDGPTSQRST*LCFPRA Trigger: AGCTCTTGGGAAGCAGAGGCAGGTGGATCTCTGTGA...GGTGGGGCCGTCAAACCTGACATTTATTAGAAAATTGCTTGGATTGTACCGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052740.14 ENSMUST00000136274.3 |
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| 3UTR-3UTR GCA 90 bp | TTATTTGGGCTTCTAAGGCTGACATTCTCCTCTGAAGGTCAAAATAACTTGGCAACTCCCCAGCCTCTCTaGCACCTGATGTCTGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: LFGLLRLTFSSEGQNNLATPQPL*HLMSES Trigger: GCTTTCAGACATCAGGTGGCAGAGAGGCTGGGGAGT...TGCCAAGTTATTTTGACCTTCAGAGGAGAATGTCAGCCTTAGAAGCCCAAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
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| 3UTR-3UTR GCA 90 bp | ACACGGTACAATCCAAGCAATTTTCTAATAAATGTCAGGTTTGACGGCCCCACCGTTCTCATGAAGGACTaGAGGCTTGCTGGATCTGAG | + |
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Preference number: 2 (lower is better) Translates to: TRYNPSNFLINVRFDGPTVLMKD*RLAGSE Trigger: CTCAGATCCAGCAAGCCTGCAGTCCTTCATGAGAAC...GGTGGGGCCGTCAAACCTGACATTTATTAGAAAATTGCTTGGATTGTACCGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
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| 3UTR-3UTR CCA 90 bp | GTAACAATTAGTTCTGAGACAAATCCAATACAACACACATTACAGCAGATTCCAAGCTGGCTGCAGCGATaGGCAACTCCCCAGCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: VTISSETNPIQHTLQQIPSWLQR*ATPQPL Trigger: GAGAGGCTGGGGAGTTGCCCATCGCTGCAGCCAGCT...TGGAATCTGCTGTAATGTGTGTTGTATTGGATTTGTCTCAGAACTAATTGTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
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| 3UTR-3UTR CCA 90 bp | AGTATTTACAGCAACATTTGTCACATTAGCATGGGTCAAAAGCCACAATGGCACGGTGGTGGACATCCATaGTTCCCAGCATCACATGGC | + |
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Preference number: 2 (lower is better) Translates to: SIYSNICHISMGQKPQWHGGGHP*FPASHG Trigger: GCCATGTGATGCTGGGAACCATGGATGTCCACCACC...GTGCCATTGTGGCTTTTGACCCATGCTAATGTGACAAATGTTGCTGTAAATACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
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| 3UTR-3UTR GCA 90 bp | GTATTTACAGCAACATTTGTCACATTAGCATGGGTCAAAAGCCACAATGGCACAAGATCCACCTGCCTCTaGTTCCCAAGAGCTGGGATT | + |
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Preference number: 2 (lower is better) Translates to: VFTATFVTLAWVKSHNGTRSTCL*FPRAGI Trigger: AATCCCAGCTCTTGGGAAGCAGAGGCAGGTGGATCT...TGTGCCATTGTGGCTTTTGACCCATGCTAATGTGACAAATGTTGCTGTAAATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052740.14 ENSMUST00000136274.3 |
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| 3UTR-3UTR GCA 90 bp | ACACGGTACAATCCAAGCAATTTTCTAATAAATGTCAGGTTTGACGGCCCCACCCTGATGTCTGAAAGCTaGAGAAGCTCAGACAGCTCA | + |
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Preference number: 2 (lower is better) Translates to: TRYNPSNFLINVRFDGPTLMSES*RSSDSS Trigger: TGAGCTGTCTGAGCTTCTGCAGCTTTCAGACATCAG...GGTGGGGCCGTCAAACCTGACATTTATTAGAAAATTGCTTGGATTGTACCGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
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| 3UTR-3UTR GCA 90 bp | ACACGGTACAATCCAAGCAATTTTCTAATAAATGTCAGGTTTGACGGCCCCACCTTCCCCCTAGAAGATTaGTTATTTGGGCTTCTAAGG | + |
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Preference number: 2 (lower is better) Translates to: TRYNPSNFLINVRFDGPTFPLED*LFGLLR Trigger: CCTTAGAAGCCCAAATAAGCAATCTTCTAGGGGGAA...GGTGGGGCCGTCAAACCTGACATTTATTAGAAAATTGCTTGGATTGTACCGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
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| 3UTR-3UTR TCA 90 bp | GTAACAATTAGTTCTGAGACAAATCCAATACAACACACATTACAGCAGATTCCAAGGACCTATGCCATTTaGTGGGTCTGTCAGGCATCC | + |
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Preference number: 2 (lower is better) Translates to: VTISSETNPIQHTLQQIPRTYAI*WVCQAS Trigger: GGATGCCTGACAGACCCATCAAATGGCATAGGTCCT...TGGAATCTGCTGTAATGTGTGTTGTATTGGATTTGTCTCAGAACTAATTGTTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
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| 3UTR-3UTR GCA 90 bp | GTATTTACAGCAACATTTGTCACATTAGCATGGGTCAAAAGCCACAATGGCACAGCTGGGATATCAAAATaGCCGAGTTCATGCAAGCTT | + |
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Preference number: 2 (lower is better) Translates to: VFTATFVTLAWVKSHNGTAGISK*PSSCKL Trigger: AAGCTTGCATGAACTCGGGCATTTTGATATCCCAGC...TGTGCCATTGTGGCTTTTGACCCATGCTAATGTGACAAATGTTGCTGTAAATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
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| 3UTR-3UTR CCA 90 bp | ACACGGTACAATCCAAGCAATTTTCTAATAAATGTCAGGTTTGACGGCCCCACCTGTTCTAATGTACTGTaGGTCTACTCTGAACAGAGA | + |
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Preference number: 2 (lower is better) Translates to: TRYNPSNFLINVRFDGPTCSNVL*VYSEQR Trigger: TCTCTGTTCAGAGTAGACCCACAGTACATTAGAACA...GGTGGGGCCGTCAAACCTGACATTTATTAGAAAATTGCTTGGATTGTACCGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052740.14 ENSMUST00000136274.3 |
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| 3UTR-3UTR TCA 90 bp | GTAACAATTAGTTCTGAGACAAATCCAATACAACACACATTACAGCAGATTCCATGCCTGGGCCAGAGCTaGAGAAGTGAAGAAAGCTTT | + |
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Preference number: 2 (lower is better) Translates to: VTISSETNPIQHTLQQIPCLGQS*RSEESF Trigger: AAAGCTTTCTTCACTTCTTCAGCTCTGGCCCAGGCA...TGGAATCTGCTGTAATGTGTGTTGTATTGGATTTGTCTCAGAACTAATTGTTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052740.14 ENSMUST00000136274.3 |
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| 3UTR-3UTR GCA 90 bp | CACCATCTGTCTGCTAGAAATGCTGGGCTCTTTATACAACTTCTCCAGAGAAAATCTTCTAGTATCTTTTaGCTAGCCATCAGCATCATA | + |
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Preference number: 2 (lower is better) Translates to: HHLSARNAGLFIQLLQRKSSSIF*LAISII Trigger: TATGATGCTGATGGCTAGGCAAAAGATACTAGAAGA...TTTTCTCTGGAGAAGTTGTATAAAGAGCCCAGCATTTCTAGCAGACAGATGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
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| 3UTR-3UTR CCA 90 bp | GTATTTACAGCAACATTTGTCACATTAGCATGGGTCAAAAGCCACAATGGCACAGGTCAAAAGCCACAATaGCACACACAATCCTTTTAT | + |
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Preference number: 2 (lower is better) Translates to: VFTATFVTLAWVKSHNGTGQKPQ*HTQSFY Trigger: ATAAAAGGATTGTGTGTGCCATTGTGGCTTTTGACC...TGTGCCATTGTGGCTTTTGACCCATGCTAATGTGACAAATGTTGCTGTAAATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000052740.14 ENSMUST00000136274.3 |
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| 3UTR-3UTR GCA 90 bp | GTATTTACAGCAACATTTGTCACATTAGCATGGGTCAAAAGCCACAATGGCACATCTTCTAGTATCTTTTaGCTAGCCATCAGCATCATA | + |
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Preference number: 2 (lower is better) Translates to: VFTATFVTLAWVKSHNGTSSSIF*LAISII Trigger: TATGATGCTGATGGCTAGGCAAAAGATACTAGAAGA...TGTGCCATTGTGGCTTTTGACCCATGCTAATGTGACAAATGTTGCTGTAAATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052740.14 ENSMUST00000136274.3 |
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| 3UTR-3UTR GCA 90 bp | GTATTTACAGCAACATTTGTCACATTAGCATGGGTCAAAAGCCACAATGGCACATTAACTTTTGCTACTTaGCAGTCATCTGTCTTGAAT | + |
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Preference number: 2 (lower is better) Translates to: VFTATFVTLAWVKSHNGTLTFAT*QSSVLN Trigger: ATTCAAGACAGATGACTGGCAAGTAGCAAAAGTTAA...TGTGCCATTGTGGCTTTTGACCCATGCTAATGTGACAAATGTTGCTGTAAATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052740.14 ENSMUST00000136274.3 |
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| 3UTR-3UTR GCA 90 bp | GTAACAATTAGTTCTGAGACAAATCCAATACAACACACATTACAGCAGATTCCATGGTTATTTAACTTTTaGTACTTGCCAGTCATCTGT | + |
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Preference number: 2 (lower is better) Translates to: VTISSETNPIQHTLQQIPWLFNF*YLPVIC Trigger: ACAGATGACTGGCAAGTAGCAAAAGTTAAATAACCA...TGGAATCTGCTGTAATGTGTGTTGTATTGGATTTGTCTCAGAACTAATTGTTAC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052740.14 ENSMUST00000136274.3 |
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| 3UTR GCA 72 bp | GGCCCCGGATTCTGCTGTGCTAGGCGGCTGAGACTGTaGAGCTGGCTGCAGCGATGGGCAACTCCCCAGCCT | + |
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Preference number: 3 (lower is better) Translates to: GPGFCCARRLRL*SWLQRWATPQP Trigger: AGGCTGGGGAGTTGCCCATCGCTGCAGCCAGCTGCACAGTCTCAGCCGCCTAGCACAGCAGAATCCGGGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
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| 3UTR CCA 72 bp | GCTAGGCGGCTGAGACTGTGCAGCTGGCTGCAGCGATaGGCAACTCCCCAGCCTCTCTGCCACCTGATGTCT | + |
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Preference number: 3 (lower is better) Translates to: ARRLRLCSWLQR*ATPQPLCHLMS Trigger: AGACATCAGGTGGCAGAGAGGCTGGGGAGTTGCCCATCGCTGCAGCCAGCTGCACAGTCTCAGCCGCCTAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
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| 3UTR-3UTR CAA 90 bp | CTGTGCAGGAGACAGCTGAGCACAAAGGAGGCCATGCTTCACCTGAGAGCGAGCATCCCTGTAGCTTCCTaGAGAGGCTGGGAATGCACA | + |
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Preference number: 3 (lower is better) Translates to: LCRRQLSTKEAMLHLRASIPVAS*RGWECT Trigger: TGTGCATTCCCAGCCTCTCAAGGAAGCTACAGGGAT...GCTCGCTCTCAGGTGAAGCATGGCCTCCTTTGTGCTCAGCTGTCTCCTGCACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
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| 3UTR CCA 72 bp | CAGTGGTGGTGGACATCCATGGTTCCCAGCATCACATaGCCCAGTGCACTCATACCGGAGCGGTCTGTGAAT | + |
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Preference number: 3 (lower is better) Translates to: QWWWTSMVPSIT*PSALIPERSVN Trigger: ATTCACAGACCGCTCCGGTATGAGTGCACTGGGCCATGTGATGCTGGGAACCATGGATGTCCACCACCACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
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| 3UTR TCA 72 bp | CGGTCTGTGAATACAACCGTGCATCCTTTCACATTCTaGAGTGGCCCCGGATTCTGCTGTGCTAGGCGGCTG | + |
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Preference number: 3 (lower is better) Translates to: RSVNTTVHPFTF*SGPGFCCARRL Trigger: CAGCCGCCTAGCACAGCAGAATCCGGGGCCACTTCAGAATGTGAAAGGATGCACGGTTGTATTCACAGACCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
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| 3UTR GCA 72 bp | TGGGTCTACTCTGAACAGAGAGCAGGCCTCTCACTGTaGAGGAGACAGCTGAGCACAAAGGAGGCCATGCTT | + |
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Preference number: 3 (lower is better) Translates to: WVYSEQRAGLSL*RRQLSTKEAML Trigger: AAGCATGGCCTCCTTTGTGCTCAGCTGTCTCCTGCACAGTGAGAGGCCTGCTCTCTGTTCAGAGTAGACCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052740.14 ENSMUST00000136274.3 |
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| 3UTR GCA 72 bp | ACTCCCCAGCCTCTCTGCCACCTGATGTCTGAAAGCTaGAGAAGCTCAGACAGCTCATTCTTCAGGCGATCC | + |
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Preference number: 3 (lower is better) Translates to: TPQPLCHLMSES*RSSDSSFFRRS Trigger: GGATCGCCTGAAGAATGAGCTGTCTGAGCTTCTGCAGCTTTCAGACATCAGGTGGCAGAGAGGCTGGGGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
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| 3UTR GCA 72 bp | GTGGACATCCATGGTTCCCAGCATCACATGGCCCAGTaGACTCATACCGGAGCGGTCTGTGAATACAACCGT | + |
|
Preference number: 3 (lower is better) Translates to: VDIHGSQHHMAQ*THTGAVCEYNR Trigger: ACGGTTGTATTCACAGACCGCTCCGGTATGAGTGCACTGGGCCATGTGATGCTGGGAACCATGGATGTCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
||
| 3UTR GCA 72 bp | AGGCTTGCTGGATCTGAGAGGGCTGGGATATCAAAATaGCCGAGTTCATGCAAGCTTGGCGCATACCTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: RLAGSERAGISK*PSSCKLGAYLS Trigger: TGACAGGTATGCGCCAAGCTTGCATGAACTCGGGCATTTTGATATCCCAGCCCTCTCAGATCCAGCAAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
||
| 3UTR CCA 72 bp | CTTGGCAAGCTTTCAAAAAGCCTTGTCCAGTGGTGGTaGACATCCATGGTTCCCAGCATCACATGGCCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: LGKLSKSLVQWW*TSMVPSITWPS Trigger: ACTGGGCCATGTGATGCTGGGAACCATGGATGTCCACCACCACTGGACAAGGCTTTTTGAAAGCTTGCCAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
||
| 3UTR TCA 72 bp | TCACATGGCCCAGTGCACTCATACCGGAGCGGTCTGTaGATACAACCGTGCATCCTTTCACATTCTGAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: SHGPVHSYRSGL*IQPCILSHSEV Trigger: CACTTCAGAATGTGAAAGGATGCACGGTTGTATTCACAGACCGCTCCGGTATGAGTGCACTGGGCCATGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
||
| 3UTR GCA 72 bp | GACTGTTCCTCAGCTTCTTCACGGCACCTTTCCCATTaGTACCTAACCAGGACGTTAGGGTTGTTTCCACTC | + |
|
Preference number: 3 (lower is better) Translates to: DCSSASSRHLSH*YLTRTLGLFPL Trigger: GAGTGGAAACAACCCTAACGTCCTGGTTAGGTAGCAATGGGAAAGGTGCCGTGAAGAAGCTGAGGAACAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
||
| 3UTR GCA 72 bp | TCTGAGAGGGCTGGGATATCAAAATGCCCGAGTTCATaGAAGCTTGGCGCATACCTGTCACTGCTAAGGATC | + |
|
Preference number: 3 (lower is better) Translates to: SERAGISKCPSS*KLGAYLSLLRI Trigger: GATCCTTAGCAGTGACAGGTATGCGCCAAGCTTGCATGAACTCGGGCATTTTGATATCCCAGCCCTCTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
||
| 3UTR CCA 72 bp | TTTCAAAAAGCCTTGTCCAGTGGTGGTGGACATCCATaGTTCCCAGCATCACATGGCCCAGTGCACTCATAC | + |
|
Preference number: 3 (lower is better) Translates to: FQKALSSGGGHP*FPASHGPVHSY Trigger: GTATGAGTGCACTGGGCCATGTGATGCTGGGAACCATGGATGTCCACCACCACTGGACAAGGCTTTTTGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
||
| 3UTR CCA 72 bp | GGCTGGGATATCAAAATGCCCGAGTTCATGCAAGCTTaGCGCATACCTGTCACTGCTAAGGATCATCTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: GWDIKMPEFMQA*RIPVTAKDHLQ Trigger: TTGCAGATGATCCTTAGCAGTGACAGGTATGCGCCAAGCTTGCATGAACTCGGGCATTTTGATATCCCAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGGCTGGGATATCAAAATGCCCGAGTTCATGCAAGCTTGGCGCATACCTGTTGCCAGTCATCTGTCTaGAATAACCGTCTATTACTG | + |
|
Preference number: 3 (lower is better) Translates to: RGLGYQNARVHASLAHTCCQSSV*NNRLLL Trigger: CAGTAATAGACGGTTATTCAAGACAGATGACTGGCA...ACAGGTATGCGCCAAGCTTGCATGAACTCGGGCATTTTGATATCCCAGCCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
||
| 3UTR GCA 72 bp | GGTGTGGAGGAGAGAGTAGTACTGATCAAGTGTGAGTaGTGGCTGCAACTCTTCGATATAAACCACTTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: GVEERVVLIKCE*WLQLFDINHLD Trigger: ATCCAAGTGGTTTATATCGAAGAGTTGCAGCCAGCACTCACACTTGATCAGTACTACTCTCTCCTCCACACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
||
| 3UTR GCA 72 bp | TTTAACTTCTCCCTTCTAGTCATGTTTTCTCTCGCCTaGTGGGCTTTGGTTCTCATGAAGGACTGCAGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: FNFSLLVMFSLA*WALVLMKDCRL Trigger: AAGCCTGCAGTCCTTCATGAGAACCAAAGCCCAGCAGGCGAGAGAAAACATGACTAGAAGGGAGAAGTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
||
| 3UTR CCA 72 bp | GTGGAGGAGAGAGTAGTACTGATCAAGTGTGAGTGCTaGCTGCAACTCTTCGATATAAACCACTTGGATTCC | + |
|
Preference number: 3 (lower is better) Translates to: VEERVVLIKCEC*LQLFDINHLDS Trigger: GGAATCCAAGTGGTTTATATCGAAGAGTTGCAGCCAGCACTCACACTTGATCAGTACTACTCTCTCCTCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
||
| 3UTR TCA 72 bp | AGAAGGTGTGGAGGAGAGAGTAGTACTGATCAAGTGTaGGTGCTGGCTGCAACTCTTCGATATAAACCACTT | + |
|
Preference number: 3 (lower is better) Translates to: RRCGGESSTDQV*VLAATLRYKPL Trigger: AAGTGGTTTATATCGAAGAGTTGCAGCCAGCACTCACACTTGATCAGTACTACTCTCTCCTCCACACCTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
||
| 3UTR-3UTR CAA 90 bp | GTATTTACAGCAACATTTGTCACATTAGCATGGGTCAAAAGCCACAATGGCACATACATCTTACTCATCTaGAGGATGCCTGTGCCCACC | + |
|
Preference number: 3 (lower is better) Translates to: VFTATFVTLAWVKSHNGTYILLI*RMPVPT Trigger: GGTGGGCACAGGCATCCTCAAGATGAGTAAGATGTA...TGTGCCATTGTGGCTTTTGACCCATGCTAATGTGACAAATGTTGCTGTAAATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052740.14 ENSMUST00000136274.3 |
||
| 3UTR-3UTR CAA 90 bp | ACACGGTACAATCCAAGCAATTTTCTAATAAATGTCAGGTTTGACGGCCCCACCTGCCAGTCATCTGTCTaGAATAACCGTCTATTACTG | + |
|
Preference number: 3 (lower is better) Translates to: TRYNPSNFLINVRFDGPTCQSSV*NNRLLL Trigger: CAGTAATAGACGGTTATTCAAGACAGATGACTGGCA...GGTGGGGCCGTCAAACCTGACATTTATTAGAAAATTGCTTGGATTGTACCGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052740.14 ENSMUST00000136274.3 |
||
| 3UTR GCA 72 bp | CTTCGATATAAACCACTTGGATTCCCCCTAGAAGATTaGTTATTTGGGCTTCTAAGGCTGACATTCTCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LRYKPLGFPLED*LFGLLRLTFSS Trigger: AGAGGAGAATGTCAGCCTTAGAAGCCCAAATAAGCAATCTTCTAGGGGGAATCCAAGTGGTTTATATCGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
||
| 3UTR-3UTR CAA 90 bp | CACCATCTGTCTGCTAGAAATGCTGGGCTCTTTATACAACTTCTCCAGAGAAAATTTAACTTTTGCTACTaGCCAGTCATCTGTCTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: HHLSARNAGLFIQLLQRKFNFCY*PVICLE Trigger: TTCAAGACAGATGACTGGCAAGTAGCAAAAGTTAAA...TTTTCTCTGGAGAAGTTGTATAAAGAGCCCAGCATTTCTAGCAGACAGATGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
||
| 3UTR-3UTR CAA 90 bp | AGTATTTACAGCAACATTTGTCACATTAGCATGGGTCAAAAGCCACAATGGCACTTTAACTTTTGCTACTaGCCAGTCATCTGTCTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: SIYSNICHISMGQKPQWHFNFCY*PVICLE Trigger: TTCAAGACAGATGACTGGCAAGTAGCAAAAGTTAAA...GTGCCATTGTGGCTTTTGACCCATGCTAATGTGACAAATGTTGCTGTAAATACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052740.14 ENSMUST00000136274.3 |
||
| CDS-3UTR TCA 90 bp | TGGACATCCATGGTTCCCAGCATCACATGGCCCAGTGCACTCATACCGGAGCGGAAGGCCTCAAGGCGTTaGTGGCTTCTGCCCCTGATA | + |
|
Preference number: 4 (lower is better) Translates to: WTSMVPSITWPSALIPERKASRR*WLLPLI Trigger: TATCAGGGGCAGAAGCCATCAACGCCTTGAGGCCTT...CCGCTCCGGTATGAGTGCACTGGGCCATGTGATGCTGGGAACCATGGATGTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
||
| CDS-3UTR TCA 90 bp | AGAGCAGGCCTCTCACTGTGCAGGAGACAGCTGAGCACAAAGGAGGCCATGCTTAGGACCTATGCCATTTaGTGGGTCTGTCAGGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: RAGLSLCRRQLSTKEAMLRTYAI*WVCQAS Trigger: GGATGCCTGACAGACCCATCAAATGGCATAGGTCCT...AAGCATGGCCTCCTTTGTGCTCAGCTGTCTCCTGCACAGTGAGAGGCCTGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
||
| CDS-3UTR GCA 90 bp | CTGTGCAGGAGACAGCTGAGCACAAAGGAGGCCATGCTTCACCTGAGAGCGAGCTCCCTTTCCCTGGGGTaGTGTCCAAAGAAATCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LCRRQLSTKEAMLHLRASSLSLG*CPKKSG Trigger: TCCTGATTTCTTTGGACAGCACCCCAGGGAAAGGGA...GCTCGCTCTCAGGTGAAGCATGGCCTCCTTTGTGCTCAGCTGTCTCCTGCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052740.14 ENSMUST00000136274.3 |
||
| CDS-3UTR GCA 90 bp | AGAGCAGGCCTCTCACTGTGCAGGAGACAGCTGAGCACAAAGGAGGCCATGCTTAAATGCCCGAGTTCATaGAAGCTTGGCGCATACCTG | + |
|
Preference number: 4 (lower is better) Translates to: RAGLSLCRRQLSTKEAMLKCPSS*KLGAYL Trigger: CAGGTATGCGCCAAGCTTGCATGAACTCGGGCATTT...AAGCATGGCCTCCTTTGTGCTCAGCTGTCTCCTGCACAGTGAGAGGCCTGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
||
| CDS-3UTR CCA 90 bp | AGAGCAGGCCTCTCACTGTGCAGGAGACAGCTGAGCACAAAGGAGGCCATGCTTGAGTTCATGCAAGCTTaGCGCATACCTGTCACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RAGLSLCRRQLSTKEAMLEFMQA*RIPVTA Trigger: AGCAGTGACAGGTATGCGCCAAGCTTGCATGAACTC...AAGCATGGCCTCCTTTGTGCTCAGCTGTCTCCTGCACAGTGAGAGGCCTGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
||
| CDS-3UTR TCA 90 bp | GGGGCGGCACCCTGCTTCTCAGCAGCTGGTTGTAGAAGGTGTGGAGGAGAGAGTTTGGTTTCAGAGATTTaGAGCCTGGTTTCTGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GAAPCFSAAGCRRCGGESLVSEI*SLVSGD Trigger: ATCTCCAGAAACCAGGCTTCAAATCTCTGAAACCAA...ACTCTCTCCTCCACACCTTCTACAACCAGCTGCTGAGAAGCAGGGTGCCGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
||
| CDS-3UTR GCA 90 bp | CAGAAGCTCAGACAGCTCATTCTTCAGGCGATCCAGCTCCTTCCGAAGTGGCAGTCCCTTTCCCTGGGGTaGTGTCCAAAGAAATCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QKLRQLILQAIQLLPKWQSLSLG*CPKKSG Trigger: TCCTGATTTCTTTGGACAGCACCCCAGGGAAAGGGA...CTGCCACTTCGGAAGGAGCTGGATCGCCTGAAGAATGAGCTGTCTGAGCTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
||
| CDS-3UTR TCA 90 bp | AGAGCAGGCCTCTCACTGTGCAGGAGACAGCTGAGCACAAAGGAGGCCATGCTTTTGGTTTCAGAGATTTaGAGCCTGGTTTCTGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RAGLSLCRRQLSTKEAMLLVSEI*SLVSGD Trigger: ATCTCCAGAAACCAGGCTTCAAATCTCTGAAACCAA...AAGCATGGCCTCCTTTGTGCTCAGCTGTCTCCTGCACAGTGAGAGGCCTGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052740.14 ENSMUST00000136274.3 |
||
| CDS-3UTR GCA 90 bp | GTATTTACAGCAACATTTGTCACATTAGCATGGGTCAAAAGCCACAATGGCACAGGTGGGGCGGCACCCTaGTTCTCAGCAGCTGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VFTATFVTLAWVKSHNGTGGAAP*FSAAGC Trigger: ACAACCAGCTGCTGAGAAGCAGGGTGCCGCCCCACC...TGTGCCATTGTGGCTTTTGACCCATGCTAATGTGACAAATGTTGCTGTAAATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
||
| CDS-3UTR CCA 90 bp | CTGTGCAGGAGACAGCTGAGCACAAAGGAGGCCATGCTTCACCTGAGAGCGAGCAGAAGATTGCTTATTTaGGCTTCTAAGGCTGACATT | + |
|
Preference number: 4 (lower is better) Translates to: LCRRQLSTKEAMLHLRASRRLLI*ASKADI Trigger: AATGTCAGCCTTAGAAGCCCAAATAAGCAATCTTCT...GCTCGCTCTCAGGTGAAGCATGGCCTCCTTTGTGCTCAGCTGTCTCCTGCACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
||
| CDS-3UTR CCA 90 bp | AGAGCAGGCCTCTCACTGTGCAGGAGACAGCTGAGCACAAAGGAGGCCATGCTTAAATGTAAGCTGAGTTaGTTTCAGAGATTTGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RAGLSLCRRQLSTKEAMLKCKLS*FQRFEA Trigger: GGCTTCAAATCTCTGAAACCAACTCAGCTTACATTT...AAGCATGGCCTCCTTTGTGCTCAGCTGTCTCCTGCACAGTGAGAGGCCTGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052740.14 ENSMUST00000136274.3 |
||
| CDS-3UTR CCA 90 bp | ACACGGTACAATCCAAGCAATTTTCTAATAAATGTCAGGTTTGACGGCCCCACCAGCCTTGTCCAGTGGTaGTGGACATCCATGGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TRYNPSNFLINVRFDGPTSLVQW*WTSMVP Trigger: GGGAACCATGGATGTCCACCACCACTGGACAAGGCT...GGTGGGGCCGTCAAACCTGACATTTATTAGAAAATTGCTTGGATTGTACCGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
||
| CDS-3UTR TCA 90 bp | ACACGGTACAATCCAAGCAATTTTCTAATAAATGTCAGGTTTGACGGCCCCACCAGCCTCTCTGCCACCTaGTGTCTGAAAGCTGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TRYNPSNFLINVRFDGPTSLSAT*CLKAAE Trigger: TTCTGCAGCTTTCAGACATCAGGTGGCAGAGAGGCT...GGTGGGGCCGTCAAACCTGACATTTATTAGAAAATTGCTTGGATTGTACCGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
||
| CDS-3UTR TCA 90 bp | GTAACAATTAGTTCTGAGACAAATCCAATACAACACACATTACAGCAGATTCCAGCTGTGCTAGGCGGCTaGGACTGTGCAGCTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VTISSETNPIQHTLQQIPAVLGG*DCAAGC Trigger: GCAGCCAGCTGCACAGTCTCAGCCGCCTAGCACAGC...TGGAATCTGCTGTAATGTGTGTTGTATTGGATTTGTCTCAGAACTAATTGTTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
||
| CDS-3UTR TCA 90 bp | GTATTTACAGCAACATTTGTCACATTAGCATGGGTCAAAAGCCACAATGGCACAGGGCTTTGGTTCTCATaGAGGACTGCAGGCTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VFTATFVTLAWVKSHNGTGLWFS*RTAGLL Trigger: CAGCAAGCCTGCAGTCCTTCATGAGAACCAAAGCCC...TGTGCCATTGTGGCTTTTGACCCATGCTAATGTGACAAATGTTGCTGTAAATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
||
| CDS-3UTR GCA 90 bp | TTAAACTGTGTTGCATGTAAAAATGGAGTCCCAGTCCTAAAGAGCTATACTGAGCATCACATGGCCCAGTaGACTCATACCGGAGCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LNCVACKNGVPVLKSYTEHHMAQ*THTGAV Trigger: GACCGCTCCGGTATGAGTGCACTGGGCCATGTGATG...CTCAGTATAGCTCTTTAGGACTGGGACTCCATTTTTACATGCAACACAGTTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
||
| CDS-3UTR CCA 90 bp | GTATTTACAGCAACATTTGTCACATTAGCATGGGTCAAAAGCCACAATGGCACAGGTGGTGGACATCCATaGTTCCCAGCATCACATGGC | + |
|
Preference number: 4 (lower is better) Translates to: VFTATFVTLAWVKSHNGTGGGHP*FPASHG Trigger: GCCATGTGATGCTGGGAACCATGGATGTCCACCACC...TGTGCCATTGTGGCTTTTGACCCATGCTAATGTGACAAATGTTGCTGTAAATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
||
| CDS-3UTR CCA 90 bp | AGTATTTACAGCAACATTTGTCACATTAGCATGGGTCAAAAGCCACAATGGCACCTTGTCCAGTGGTGGTaGACATCCATGGTTCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SIYSNICHISMGQKPQWHLVQWW*TSMVPS Trigger: GCTGGGAACCATGGATGTCCACCACCACTGGACAAG...GTGCCATTGTGGCTTTTGACCCATGCTAATGTGACAAATGTTGCTGTAAATACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
||
| CDS-3UTR TCA 90 bp | GTATTTACAGCAACATTTGTCACATTAGCATGGGTCAAAAGCCACAATGGCACACTCTTGAGACGTGTGTaGGGTCTTCATCAGGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VFTATFVTLAWVKSHNGTLLRRV*GLHQGP Trigger: AGGACCCTGATGAAGACCTCACACACGTCTCAAGAG...TGTGCCATTGTGGCTTTTGACCCATGCTAATGTGACAAATGTTGCTGTAAATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
||
| CDS-3UTR GCA 90 bp | TTAAACTGTGTTGCATGTAAAAATGGAGTCCCAGTCCTAAAGAGCTATACTGAGACTCCCCAGCCTCTCTaGCACCTGATGTCTGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LNCVACKNGVPVLKSYTETPQPL*HLMSES Trigger: GCTTTCAGACATCAGGTGGCAGAGAGGCTGGGGAGT...CTCAGTATAGCTCTTTAGGACTGGGACTCCATTTTTACATGCAACACAGTTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
||
| CDS-3UTR GCA 90 bp | GTATTTACAGCAACATTTGTCACATTAGCATGGGTCAAAAGCCACAATGGCACATCCAGTTCCACGGGATaGACAGGTCTCCATCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VFTATFVTLAWVKSHNGTSSSTG*TGLHLA Trigger: TGCAAGATGGAGACCTGTGCATCCCGTGGAACTGGA...TGTGCCATTGTGGCTTTTGACCCATGCTAATGTGACAAATGTTGCTGTAAATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
||
| CDS-3UTR CCA 90 bp | ACACGGTACAATCCAAGCAATTTTCTAATAAATGTCAGGTTTGACGGCCCCACCGCTTCCTTGAGAGGCTaGGAATGCACATTAGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TRYNPSNFLINVRFDGPTASLRG*ECTLVF Trigger: GAACACTAATGTGCATTCCCAGCCTCTCAAGGAAGC...GGTGGGGCCGTCAAACCTGACATTTATTAGAAAATTGCTTGGATTGTACCGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
||
| CDS-3UTR TCA 90 bp | TTAAACTGTGTTGCATGTAAAAATGGAGTCCCAGTCCTAAAGAGCTATACTGAGCTGCCACCTGATGTCTaGAAGCTGCAGAAGCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LNCVACKNGVPVLKSYTELPPDV*KLQKLR Trigger: TCTGAGCTTCTGCAGCTTTCAGACATCAGGTGGCAG...CTCAGTATAGCTCTTTAGGACTGGGACTCCATTTTTACATGCAACACAGTTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
||
| CDS-3UTR GCA 90 bp | TTAAACTGTGTTGCATGTAAAAATGGAGTCCCAGTCCTAAAGAGCTATACTGAGCAGAGGTGCATCCCATaGAGATATGGCAGCGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: LNCVACKNGVPVLKSYTEQRCIP*RYGSDC Trigger: ACAGTCGCTGCCATATCTGCATGGGATGCACCTCTG...CTCAGTATAGCTCTTTAGGACTGGGACTCCATTTTTACATGCAACACAGTTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
||
| CDS-3UTR GCA 90 bp | TTAAACTGTGTTGCATGTAAAAATGGAGTCCCAGTCCTAAAGAGCTATACTGAGTGTGAGACGCAGAGGTaGATCCCATGCAGATATGGC | + |
|
Preference number: 4 (lower is better) Translates to: LNCVACKNGVPVLKSYTECETQR*IPCRYG Trigger: GCCATATCTGCATGGGATGCACCTCTGCGTCTCACA...CTCAGTATAGCTCTTTAGGACTGGGACTCCATTTTTACATGCAACACAGTTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
||
| CDS-3UTR CCA 90 bp | AGTATTTACAGCAACATTTGTCACATTAGCATGGGTCAAAAGCCACAATGGCACGTACTGATAGGCTCCTaGCCTTCAGAGGAATTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SIYSNICHISMGQKPQWHVLIGS*PSEEFW Trigger: CCAGAATTCCTCTGAAGGCCAGGAGCCTATCAGTAC...GTGCCATTGTGGCTTTTGACCCATGCTAATGTGACAAATGTTGCTGTAAATACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052740.14 ENSMUST00000136274.3 |
||
| CDS-3UTR TCA 90 bp | GTAACAATTAGTTCTGAGACAAATCCAATACAACACACATTACAGCAGATTCCAAAGGCCTCAAGGCGTTaGTGGCTTCTGCCCCTGATA | + |
|
Preference number: 4 (lower is better) Translates to: VTISSETNPIQHTLQQIPKASRR*WLLPLI Trigger: TATCAGGGGCAGAAGCCATCAACGCCTTGAGGCCTT...TGGAATCTGCTGTAATGTGTGTTGTATTGGATTTGTCTCAGAACTAATTGTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052740.14 ENSMUST00000136274.3 |
||
| CDS-3UTR GCA 90 bp | AGTATTTACAGCAACATTTGTCACATTAGCATGGGTCAAAAGCCACAATGGCACCTGATGTCTGAAAGCTaGAGAAGCTCAGACAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SIYSNICHISMGQKPQWHLMSES*RSSDSS Trigger: TGAGCTGTCTGAGCTTCTGCAGCTTTCAGACATCAG...GTGCCATTGTGGCTTTTGACCCATGCTAATGTGACAAATGTTGCTGTAAATACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
||
| CDS-3UTR CCA 90 bp | TTAAACTGTGTTGCATGTAAAAATGGAGTCCCAGTCCTAAAGAGCTATACTGAGGTACTGATAGGCTCCTaGCCTTCAGAGGAATTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LNCVACKNGVPVLKSYTEVLIGS*PSEEFW Trigger: CCAGAATTCCTCTGAAGGCCAGGAGCCTATCAGTAC...CTCAGTATAGCTCTTTAGGACTGGGACTCCATTTTTACATGCAACACAGTTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052740.14 ENSMUST00000136274.3 |
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| CDS-3UTR GCA 90 bp | CACCATCTGTCTGCTAGAAATGCTGGGCTCTTTATACAACTTCTCCAGAGAAAAGAAATCAGGATGCACTaGAAAGTAGAAAGGCCTCAA | + |
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Preference number: 4 (lower is better) Translates to: HHLSARNAGLFIQLLQRKEIRMH*KVERPQ Trigger: TTGAGGCCTTTCTACTTTGCAGTGCATCCTGATTTC...TTTTCTCTGGAGAAGTTGTATAAAGAGCCCAGCATTTCTAGCAGACAGATGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
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| CDS-3UTR GCA 90 bp | ACACGGTACAATCCAAGCAATTTTCTAATAAATGTCAGGTTTGACGGCCCCACCTTCTCCAGAGAAAACTaGTTTGTTGAAGCCTGTATC | + |
|
Preference number: 4 (lower is better) Translates to: TRYNPSNFLINVRFDGPTFSREN*FVEACI Trigger: GATACAGGCTTCAACAAAGCAGTTTTCTCTGGAGAA...GGTGGGGCCGTCAAACCTGACATTTATTAGAAAATTGCTTGGATTGTACCGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
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| CDS-3UTR CCA 90 bp | TTAAACTGTGTTGCATGTAAAAATGGAGTCCCAGTCCTAAAGAGCTATACTGAGAAAAGCCTTGTCCAGTaGTGGTGGACATCCATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LNCVACKNGVPVLKSYTEKSLVQ*WWTSMV Trigger: AACCATGGATGTCCACCACCACTGGACAAGGCTTTT...CTCAGTATAGCTCTTTAGGACTGGGACTCCATTTTTACATGCAACACAGTTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
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| CDS-3UTR GCA 90 bp | AGTATTTACAGCAACATTTGTCACATTAGCATGGGTCAAAAGCCACAATGGCACGAAATCAGGATGCACTaGAAAGTAGAAAGGCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SIYSNICHISMGQKPQWHEIRMH*KVERPQ Trigger: TTGAGGCCTTTCTACTTTGCAGTGCATCCTGATTTC...GTGCCATTGTGGCTTTTGACCCATGCTAATGTGACAAATGTTGCTGTAAATACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052740.14 ENSMUST00000136274.3 |
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| CDS-3UTR GCA 90 bp | GTAACAATTAGTTCTGAGACAAATCCAATACAACACACATTACAGCAGATTCCAGTTCTCATGAAGGACTaGAGGCTTGCTGGATCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VTISSETNPIQHTLQQIPVLMKD*RLAGSE Trigger: CTCAGATCCAGCAAGCCTGCAGTCCTTCATGAGAAC...TGGAATCTGCTGTAATGTGTGTTGTATTGGATTTGTCTCAGAACTAATTGTTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
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| CDS-3UTR TCA 90 bp | TTAAACTGTGTTGCATGTAAAAATGGAGTCCCAGTCCTAAAGAGCTATACTGAGGCAAACTGCAGGAGTTaGGAATATACAATACTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LNCVACKNGVPVLKSYTEANCRS*EYTILC Trigger: GCACAGTATTGTATATTCTCAACTCCTGCAGTTTGC...CTCAGTATAGCTCTTTAGGACTGGGACTCCATTTTTACATGCAACACAGTTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
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| CDS-3UTR GCA 90 bp | TTAAACTGTGTTGCATGTAAAAATGGAGTCCCAGTCCTAAAGAGCTATACTGAGTTGAGAGGCTGGGAATaGACATTAGTGTTCAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LNCVACKNGVPVLKSYTELRGWE*TLVFKL Trigger: AAGCTTGAACACTAATGTGCATTCCCAGCCTCTCAA...CTCAGTATAGCTCTTTAGGACTGGGACTCCATTTTTACATGCAACACAGTTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
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| CDS-3UTR GCA 90 bp | TTAAACTGTGTTGCATGTAAAAATGGAGTCCCAGTCCTAAAGAGCTATACTGAGTTCCCCCTAGAAGATTaGTTATTTGGGCTTCTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LNCVACKNGVPVLKSYTEFPLED*LFGLLR Trigger: CCTTAGAAGCCCAAATAAGCAATCTTCTAGGGGGAA...CTCAGTATAGCTCTTTAGGACTGGGACTCCATTTTTACATGCAACACAGTTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
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| 3UTR CAA 72 bp | GGTTATTTAACTTTTGCTACTTGCCAGTCATCTGTCTaGAATAACCGTCTATTACTGGCTACAAAGTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GYLTFATCQSSV*NNRLLLATKCV Trigger: CACACACTTTGTAGCCAGTAATAGACGGTTATTCAAGACAGATGACTGGCAAGTAGCAAAAGTTAAATAACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052740.14 ENSMUST00000136274.3 |
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| CDS-3UTR CCA 90 bp | GTAACAATTAGTTCTGAGACAAATCCAATACAACACACATTACAGCAGATTCCAAAATGTAAGCTGAGTTaGTTTCAGAGATTTGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VTISSETNPIQHTLQQIPKCKLS*FQRFEA Trigger: GGCTTCAAATCTCTGAAACCAACTCAGCTTACATTT...TGGAATCTGCTGTAATGTGTGTTGTATTGGATTTGTCTCAGAACTAATTGTTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052740.14 ENSMUST00000136274.3 |
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| CDS-3UTR CAA 90 bp | CTGTGCAGGAGACAGCTGAGCACAAAGGAGGCCATGCTTCACCTGAGAGCGAGCAGCTTTCAAAAAGCCTaGTCCAGTGGTGGTGGACAT | + |
|
Preference number: 5 (lower is better) Translates to: LCRRQLSTKEAMLHLRASSFQKA*SSGGGH Trigger: ATGTCCACCACCACTGGACAAGGCTTTTTGAAAGCT...GCTCGCTCTCAGGTGAAGCATGGCCTCCTTTGTGCTCAGCTGTCTCCTGCACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
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| CDS GCA 90 bp | ATGGGTCTGTCAGGCATCCCTGTAGCTTCCTTGAGAGGCTGGGAATaGACATTAGTGTTCAAGCTTTGGACGTGTTCAACAGGCAAACTG | + |
|
Preference number: 5 (lower is better) Translates to: MGLSGIPVASLRGWE*TLVFKLWTCSTGKL Trigger: CAGTTTGCCTGTTGAACACGTCCAAAGCTTGAACACTAATGTGCATTCCCAGCCTCTCAAGGAAGCTACAGGGATGCCTGACAGACCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
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| CDS-3UTR CAA 90 bp | ACACGGTACAATCCAAGCAATTTTCTAATAAATGTCAGGTTTGACGGCCCCACCCGAGTTCATGCAAGCTaGGCGCATACCTGTCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: TRYNPSNFLINVRFDGPTRVHAS*AHTCHC Trigger: GCAGTGACAGGTATGCGCCAAGCTTGCATGAACTCG...GGTGGGGCCGTCAAACCTGACATTTATTAGAAAATTGCTTGGATTGTACCGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
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| CDS TCA 90 bp | CAAAGAAATCAGGATGCACTGCAAAGTAGAAAGGCCTCAAGGCGTTaGTGGCTTCTGCCCCTGATAAAGCTCGAGAGTAGTGAAGCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: QRNQDALQSRKASRR*WLLPLIKLESSEAN Trigger: ATTGGCTTCACTACTCTCGAGCTTTATCAGGGGCAGAAGCCATCAACGCCTTGAGGCCTTTCTACTTTGCAGTGCATCCTGATTTCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052740.14 ENSMUST00000136274.3 |
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| CDS-3UTR CAA 90 bp | ACACGGTACAATCCAAGCAATTTTCTAATAAATGTCAGGTTTGACGGCCCCACCATCCCTGTAGCTTCCTaGAGAGGCTGGGAATGCACA | + |
|
Preference number: 5 (lower is better) Translates to: TRYNPSNFLINVRFDGPTIPVAS*RGWECT Trigger: TGTGCATTCCCAGCCTCTCAAGGAAGCTACAGGGAT...GGTGGGGCCGTCAAACCTGACATTTATTAGAAAATTGCTTGGATTGTACCGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
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| CDS-3UTR CAA 90 bp | TCCCTTCTAGTCATGTTTTCTCTCGCCTGCTGGGCTTTGGTTCTCATGAAGGACTTAAGAGAATTTTCATaGACTTCCCTTTCCCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SLLVMFSLACWALVLMKDLREFS*TSLSLG Trigger: CCCCAGGGAAAGGGAAGTCAATGAAAATTCTCTTAA...GTCCTTCATGAGAACCAAAGCCCAGCAGGCGAGAGAAAACATGACTAGAAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136274.3 |
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| CDS GCA 90 bp | CAGGAGTTGAGAATATACAATACTGTGCTTAGCAGATCGCTGCTGTaGAAAGTAAATCTGACTGCTCGGAATCCGGTAGTACTGATAGGC | + |
|
Preference number: 5 (lower is better) Translates to: QELRIYNTVLSRSLL*KVNLTARNPVVLIG Trigger: GCCTATCAGTACTACCGGATTCCGAGCAGTCAGATTTACTTTGCACAGCAGCGATCTGCTAAGCACAGTATTGTATATTCTCAACTCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
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| CDS CCA 90 bp | GTAGCTTCCTTGAGAGGCTGGGAATGCACATTAGTGTTCAAGCTTTaGACGTGTTCAACAGGCAAACTGCAGGAGTTGAGAATATACAAT | + |
|
Preference number: 5 (lower is better) Translates to: VASLRGWECTLVFKL*TCSTGKLQELRIYN Trigger: ATTGTATATTCTCAACTCCTGCAGTTTGCCTGTTGAACACGTCCAAAGCTTGAACACTAATGTGCATTCCCAGCCTCTCAAGGAAGCTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
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| CDS-3UTR CAA 90 bp | ACACGGTACAATCCAAGCAATTTTCTAATAAATGTCAGGTTTGACGGCCCCACCTTAAGAGAATTTTCATaGACTTCCCTTTCCCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: TRYNPSNFLINVRFDGPTLREFS*TSLSLG Trigger: CCCCAGGGAAAGGGAAGTCAATGAAAATTCTCTTAA...GGTGGGGCCGTCAAACCTGACATTTATTAGAAAATTGCTTGGATTGTACCGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000052740.14 ENSMUST00000136274.3 |
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| CDS-3UTR CAA 90 bp | ACACGGTACAATCCAAGCAATTTTCTAATAAATGTCAGGTTTGACGGCCCCACCCCAGAGAAAACTGCTTaGTTGAAGCCTGTATCAATT | + |
|
Preference number: 5 (lower is better) Translates to: TRYNPSNFLINVRFDGPTPEKTA*LKPVSI Trigger: AATTGATACAGGCTTCAACAAAGCAGTTTTCTCTGG...GGTGGGGCCGTCAAACCTGACATTTATTAGAAAATTGCTTGGATTGTACCGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
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| CDS-3UTR CAA 90 bp | GTATTTACAGCAACATTTGTCACATTAGCATGGGTCAAAAGCCACAATGGCACAATTCCCCCTAGAAGATaGCTTATTTGGGCTTCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: VFTATFVTLAWVKSHNGTIPPRR*LIWASK Trigger: CTTAGAAGCCCAAATAAGCAATCTTCTAGGGGGAAT...TGTGCCATTGTGGCTTTTGACCCATGCTAATGTGACAAATGTTGCTGTAAATAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
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| CDS-3UTR CAA 90 bp | TTAAACTGTGTTGCATGTAAAAATGGAGTCCCAGTCCTAAAGAGCTATACTGAGGGCAAACTGCAGGAGTaGAGAATATACAATACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LNCVACKNGVPVLKSYTEGKLQE*RIYNTV Trigger: CACAGTATTGTATATTCTCAACTCCTGCAGTTTGCC...CTCAGTATAGCTCTTTAGGACTGGGACTCCATTTTTACATGCAACACAGTTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
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| CDS-3UTR CAA 90 bp | TTAAACTGTGTTGCATGTAAAAATGGAGTCCCAGTCCTAAAGAGCTATACTGAGGAGAAAACTGCTTTGTaGAAGCCTGTATCAATTCAT | + |
|
Preference number: 5 (lower is better) Translates to: LNCVACKNGVPVLKSYTEEKTAL*KPVSIH Trigger: ATGAATTGATACAGGCTTCAACAAAGCAGTTTTCTC...CTCAGTATAGCTCTTTAGGACTGGGACTCCATTTTTACATGCAACACAGTTTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
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| CDS-3UTR CAA 90 bp | GTAACAATTAGTTCTGAGACAAATCCAATACAACACACATTACAGCAGATTCCAGCACAGGTCTCCATCTaGCATAACAGAATAGAAATG | + |
|
Preference number: 5 (lower is better) Translates to: VTISSETNPIQHTLQQIPAQVSI*HNRIEM Trigger: CATTTCTATTCTGTTATGCAAGATGGAGACCTGTGC...TGGAATCTGCTGTAATGTGTGTTGTATTGGATTTGTCTCAGAACTAATTGTTAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
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| CDS TCA 72 bp | CAGGATGCACTGCAAAGTAGAAAGGCCTCAAGGCGTTaGTGGCTTCTGCCCCTGATAAAGCTCGAGAGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: QDALQSRKASRR*WLLPLIKLESS Trigger: ACTACTCTCGAGCTTTATCAGGGGCAGAAGCCATCAACGCCTTGAGGCCTTTCTACTTTGCAGTGCATCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052740.14 ENSMUST00000136274.3 |
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| CDS CAA 90 bp | GACCTATGCCATTTGATGGGTCTGTCAGGCATCCCTGTAGCTTCCTaGAGAGGCTGGGAATGCACATTAGTGTTCAAGCTTTGGACGTGT | + |
|
Preference number: 6 (lower is better) Translates to: DLCHLMGLSGIPVAS*RGWECTLVFKLWTC Trigger: ACACGTCCAAAGCTTGAACACTAATGTGCATTCCCAGCCTCTCAAGGAAGCTACAGGGATGCCTGACAGACCCATCAAATGGCATAGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
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| CDS CAA 72 bp | CTTGAGAGGCTGGGAATGCACATTAGTGTTCAAGCTTaGGACGTGTTCAACAGGCAAACTGCAGGAGTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: LERLGMHISVQA*DVFNRQTAGVE Trigger: CTCAACTCCTGCAGTTTGCCTGTTGAACACGTCCAAAGCTTGAACACTAATGTGCATTCCCAGCCTCTCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
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| CDS CAA 72 bp | CATTTGATGGGTCTGTCAGGCATCCCTGTAGCTTCCTaGAGAGGCTGGGAATGCACATTAGTGTTCAAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: HLMGLSGIPVAS*RGWECTLVFKL Trigger: AAGCTTGAACACTAATGTGCATTCCCAGCCTCTCAAGGAAGCTACAGGGATGCCTGACAGACCCATCAAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
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| CDS CCA 72 bp | TTGAGAGGCTGGGAATGCACATTAGTGTTCAAGCTTTaGACGTGTTCAACAGGCAAACTGCAGGAGTTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: LRGWECTLVFKL*TCSTGKLQELR Trigger: TCTCAACTCCTGCAGTTTGCCTGTTGAACACGTCCAAAGCTTGAACACTAATGTGCATTCCCAGCCTCTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
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| CDS TCA 72 bp | AGCTTTGGACGTGTTCAACAGGCAAACTGCAGGAGTTaGGAATATACAATACTGTGCTTAGCAGATCGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SFGRVQQANCRS*EYTILCLADRC Trigger: GCAGCGATCTGCTAAGCACAGTATTGTATATTCTCAACTCCTGCAGTTTGCCTGTTGAACACGTCCAAAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
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| CDS CAA 90 bp | TGTAGCTTCCTTGAGAGGCTGGGAATGCACATTAGTGTTCAAGCTTaGGACGTGTTCAACAGGCAAACTGCAGGAGTTGAGAATATACAA | + |
|
Preference number: 6 (lower is better) Translates to: CSFLERLGMHISVQA*DVFNRQTAGVENIQ Trigger: TTGTATATTCTCAACTCCTGCAGTTTGCCTGTTGAACACGTCCAAAGCTTGAACACTAATGTGCATTCCCAGCCTCTCAAGGAAGCTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
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| CDS CAA 72 bp | AAGCTTTGGACGTGTTCAACAGGCAAACTGCAGGAGTaGAGAATATACAATACTGTGCTTAGCAGATCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: KLWTCSTGKLQE*RIYNTVLSRSL Trigger: CAGCGATCTGCTAAGCACAGTATTGTATATTCTCAACTCCTGCAGTTTGCCTGTTGAACACGTCCAAAGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
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| CDS CAA 90 bp | TTAGTGTTCAAGCTTTGGACGTGTTCAACAGGCAAACTGCAGGAGTaGAGAATATACAATACTGTGCTTAGCAGATCGCTGCTGTGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: LVFKLWTCSTGKLQE*RIYNTVLSRSLLCK Trigger: TTTGCACAGCAGCGATCTGCTAAGCACAGTATTGTATATTCTCAACTCCTGCAGTTTGCCTGTTGAACACGTCCAAAGCTTGAACACTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
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| CDS GCA 72 bp | AGAATATACAATACTGTGCTTAGCAGATCGCTGCTGTaGAAAGTAAATCTGACTGCTCGGAATCCGGTAGTA | + |
|
Preference number: 6 (lower is better) Translates to: RIYNTVLSRSLL*KVNLTARNPVV Trigger: TACTACCGGATTCCGAGCAGTCAGATTTACTTTGCACAGCAGCGATCTGCTAAGCACAGTATTGTATATTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052740.14 |
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