Pregenerated sensors for TCAF3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018656Ensembl transcript IDs: ENSMUST00000069023.4, ENSMUST00000134707.2
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CCGCTATGGGAGCCCCTGGGCAGGGGCAGAGCCATTTCACCACATTaGGAAGAAATGGAACCAAGCCATCGTGCAGCAGGTAGCTCTCAT | + |
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Preference number: 5 (lower is better) Translates to: PLWEPLGRGRAISPH*EEMEPSHRAAGSSH Trigger: ATGAGAGCTACCTGCTGCACGATGGCTTGGTTCCATTTCTTCTCAATGTGGTGAAATGGCTCTGCCCCTGCCCAGGGGCTCCCATAGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069023.4 ENSMUST00000134707.2 |
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| CDS GCA 90 bp | ATCCCAGAATCACCTAGGATGTTAACTAATGATGCTAAGGAAGAATaGACCGCTATGGGAGCCCCTGGGCAGGGGCAGAGCCATTTCACC | + |
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Preference number: 5 (lower is better) Translates to: IPESPRMLTNDAKEE*TAMGAPGQGQSHFT Trigger: GGTGAAATGGCTCTGCCCCTGCCCAGGGGCTCCCATAGCGGTGCATTCTTCCTTAGCATCATTAGTTAACATCCTAGGTGATTCTGGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069023.4 ENSMUST00000134707.2 |
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| CDS GCA 90 bp | CAATTGAGTGAATTGTCTACTCCCAAGGGAAATGCCCGCTGTCCATaGACAAGCAGCTGGGAGGGGATTACACCCGCCTCGATGTATATC | + |
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Preference number: 5 (lower is better) Translates to: QLSELSTPKGNARCP*TSSWEGITPASMYI Trigger: GATATACATCGAGGCGGGTGTAATCCCCTCCCAGCTGCTTGTGCATGGACAGCGGGCATTTCCCTTGGGAGTAGACAATTCACTCAATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069023.4 |
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| CDS TCA 90 bp | ACCTGGTTTCCAGGAAAAATGGATAGCACTTTATCATGGCCATGGTaGGCAGCCCAATTCAAAGCCTGGCCTCCAATTAGCAAACCTCCT | + |
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Preference number: 5 (lower is better) Translates to: TWFPGKMDSTLSWPW*AAQFKAWPPISKPP Trigger: AGGAGGTTTGCTAATTGGAGGCCAGGCTTTGAATTGGGCTGCTCACCATGGCCATGATAAAGTGCTATCCATTTTTCCTGGAAACCAGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069023.4 ENSMUST00000134707.2 |
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| CDS CCA 90 bp | GACTTCAGTACTTTCATATCTGAAGCTAACCCAATTCTGCCTGTCTaGTTCCCCATCAGCCAGTGTAAAGCATTAAGCACAAATGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: DFSTFISEANPILPV*FPISQCKALSTNGS Trigger: GCTGCCATTTGTGCTTAATGCTTTACACTGGCTGATGGGGAACCAGACAGGCAGAATTGGGTTAGCTTCAGATATGAAAGTACTGAAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069023.4 |
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| CDS GCA 72 bp | GACCCTCTCAGCTCTCTGAAAAGGGAAGGGCCGGGCTaGCAGCTTGGCTACAGCCCTTACCATCTTGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: DPLSSLKREGPG*QLGYSPYHLVP Trigger: TGGGACAAGATGGTAAGGGCTGTAGCCAAGCTGGCAGCCCGGCCCTTCCCTTTTCAGAGAGCTGAGAGGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069023.4 |
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| CDS CAA 90 bp | CCGGGCTGCCAGCTTGGCTACAGCCCTTACCATCTTGTCCCAGAGTaGGAGCAGTGGATAGGGGTCCTGAAGCTCCTTGAGGTTTACCGT | + |
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Preference number: 6 (lower is better) Translates to: PGCQLGYSPYHLVPE*EQWIGVLKLLEVYR Trigger: ACGGTAAACCTCAAGGAGCTTCAGGACCCCTATCCACTGCTCCAACTCTGGGACAAGATGGTAAGGGCTGTAGCCAAGCTGGCAGCCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069023.4 |
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| CDS GCA 72 bp | GAATTGTCTACTCCCAAGGGAAATGCCCGCTGTCCATaGACAAGCAGCTGGGAGGGGATTACACCCGCCTCG | + |
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Preference number: 6 (lower is better) Translates to: ELSTPKGNARCP*TSSWEGITPAS Trigger: CGAGGCGGGTGTAATCCCCTCCCAGCTGCTTGTGCATGGACAGCGGGCATTTCCCTTGGGAGTAGACAATTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069023.4 |
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| CDS CCA 72 bp | GTCCCTTCAGGATTGGGGAATGGGAAACTGCCTCGCTaGGCCACATGGCTAGTGATACCAAGGCCAAAGCGC | + |
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Preference number: 6 (lower is better) Translates to: VPSGLGNGKLPR*ATWLVIPRPKR Trigger: GCGCTTTGGCCTTGGTATCACTAGCCATGTGGCCCAGCGAGGCAGTTTCCCATTCCCCAATCCTGAAGGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069023.4 |
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| CDS CAA 72 bp | GGAGCCCCTGGGCAGGGGCAGAGCCATTTCACCACATaGAGAAGAAATGGAACCAAGCCATCGTGCAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: GAPGQGQSHFTT*RRNGTKPSCSR Trigger: CCTGCTGCACGATGGCTTGGTTCCATTTCTTCTCAATGTGGTGAAATGGCTCTGCCCCTGCCCAGGGGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069023.4 ENSMUST00000134707.2 |
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| CDS TCA 72 bp | GAGCCCCTGGGCAGGGGCAGAGCCATTTCACCACATTaGGAAGAAATGGAACCAAGCCATCGTGCAGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: EPLGRGRAISPH*EEMEPSHRAAG Trigger: ACCTGCTGCACGATGGCTTGGTTCCATTTCTTCTCAATGTGGTGAAATGGCTCTGCCCCTGCCCAGGGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069023.4 ENSMUST00000134707.2 |
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| CDS CCA 72 bp | GGATTGGGGAATGGGAAACTGCCTCGCTGGGCCACATaGCTAGTGATACCAAGGCCAAAGCGCTTAAGGACG | + |
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Preference number: 6 (lower is better) Translates to: GLGNGKLPRWAT*LVIPRPKRLRT Trigger: CGTCCTTAAGCGCTTTGGCCTTGGTATCACTAGCCATGTGGCCCAGCGAGGCAGTTTCCCATTCCCCAATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069023.4 |
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| CDS GCA 72 bp | GCCTCGATGTATATCTCAGACATCCCTTTCAGGAGCTaGTGCTGGTCGTCCTCGAGCTCATCCTCACACTGG | + |
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Preference number: 6 (lower is better) Translates to: ASMYISDIPFRS*CWSSSSSSSHW Trigger: CCAGTGTGAGGATGAGCTCGAGGACGACCAGCAGCAGCTCCTGAAAGGGATGTCTGAGATATACATCGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069023.4 |
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| CDS CAA 72 bp | CAGCTTGGCTACAGCCCTTACCATCTTGTCCCAGAGTaGGAGCAGTGGATAGGGGTCCTGAAGCTCCTTGAG | + |
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Preference number: 6 (lower is better) Translates to: QLGYSPYHLVPE*EQWIGVLKLLE Trigger: CTCAAGGAGCTTCAGGACCCCTATCCACTGCTCCAACTCTGGGACAAGATGGTAAGGGCTGTAGCCAAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069023.4 |
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| CDS TCA 72 bp | ACGGCCATAGCGGGCAGCTGCAAGAAAGCAATTGAGTaGATTGTCTACTCCCAAGGGAAATGCCCGCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: TAIAGSCKKAIE*IVYSQGKCPLS Trigger: GGACAGCGGGCATTTCCCTTGGGAGTAGACAATTCACTCAATTGCTTTCTTGCAGCTGCCCGCTATGGCCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069023.4 |
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| CDS TCA 72 bp | GACCACGGCCATAGCGGGCAGCTGCAAGAAAGCAATTaGGTGAATTGTCTACTCCCAAGGGAAATGCCCGCT | + |
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Preference number: 6 (lower is better) Translates to: DHGHSGQLQESN*VNCLLPREMPA Trigger: AGCGGGCATTTCCCTTGGGAGTAGACAATTCACTCAATTGCTTTCTTGCAGCTGCCCGCTATGGCCGTGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069023.4 |
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| CDS CCA 72 bp | GATGTTATCTGGGTATTGAGTCATACAGCTAGAGTATaGATTCCTGCGGCCCCACGACCAGGCCTCTGCACC | + |
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Preference number: 6 (lower is better) Translates to: DVIWVLSHTARV*IPAAPRPGLCT Trigger: GGTGCAGAGGCCTGGTCGTGGGGCCGCAGGAATCCATACTCTAGCTGTATGACTCAATACCCAGATAACATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069023.4 |
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| CDS GCA 72 bp | TCGATGTATATCTCAGACATCCCTTTCAGGAGCTGCTaGTGGTCGTCCTCGAGCTCATCCTCACACTGGACA | + |
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Preference number: 6 (lower is better) Translates to: SMYISDIPFRSC*WSSSSSSSHWT Trigger: TGTCCAGTGTGAGGATGAGCTCGAGGACGACCAGCAGCAGCTCCTGAAAGGGATGTCTGAGATATACATCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069023.4 |
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| CDS CCA 72 bp | GCAGGGGCAGAGCCATTTCACCACATTGAGAAGAAATaGAACCAAGCCATCGTGCAGCAGGTAGCTCTCATG | + |
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Preference number: 6 (lower is better) Translates to: AGAEPFHHIEKK*NQAIVQQVALM Trigger: CATGAGAGCTACCTGCTGCACGATGGCTTGGTTCCATTTCTTCTCAATGTGGTGAAATGGCTCTGCCCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069023.4 ENSMUST00000134707.2 |
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| CDS GCA 72 bp | AGAGGTGCTCCCTTGTTCAGGTGGTATTTGATCCTCTaGCTCCTAAGCTCAGGATTCAGAGAAGGATGGGCT | + |
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Preference number: 6 (lower is better) Translates to: RGAPLFRWYLIL*LLSSGFREGWA Trigger: AGCCCATCCTTCTCTGAATCCTGAGCTTAGGAGGCAGAGGATCAAATACCACCTGAACAAGGGAGCACCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069023.4 |
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| CDS CCA 72 bp | AGTCCAGAGATTGCACAAAGCTTCGGTGGTGTGAGGTaGAAAAGTCCATCCAGACTTCTGATGGTTGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: SPEIAQSFGGVR*KSPSRLLMVVA Trigger: GGCCACAACCATCAGAAGTCTGGATGGACTTTTCCACCTCACACCACCGAAGCTTTGTGCAATCTCTGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069023.4 |
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| CDS GCA 72 bp | TGCCTCCTAAGCTCAGGATTCAGAGAAGGATGGGCTTaGTCCCTGGGGATGTTTAAAACTGTCTCATGCACA | + |
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Preference number: 6 (lower is better) Translates to: CLLSSGFREGWA*SLGMFKTVSCT Trigger: TGTGCATGAGACAGTTTTAAACATCCCCAGGGAGCAAGCCCATCCTTCTCTGAATCCTGAGCTTAGGAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069023.4 |
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| CDS CCA 72 bp | ATCCTCTGCCTCCTAAGCTCAGGATTCAGAGAAGGATaGGCTTGCTCCCTGGGGATGTTTAAAACTGTCTCA | + |
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Preference number: 6 (lower is better) Translates to: ILCLLSSGFREG*ACSLGMFKTVS Trigger: TGAGACAGTTTTAAACATCCCCAGGGAGCAAGCCCATCCTTCTCTGAATCCTGAGCTTAGGAGGCAGAGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069023.4 |
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| CDS TCA 72 bp | CCAGGAAAAATGGATAGCACTTTATCATGGCCATGGTaGGCAGCCCAATTCAAAGCCTGGCCTCCAATTAGC | + |
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Preference number: 6 (lower is better) Translates to: PGKMDSTLSWPW*AAQFKAWPPIS Trigger: GCTAATTGGAGGCCAGGCTTTGAATTGGGCTGCTCACCATGGCCATGATAAAGTGCTATCCATTTTTCCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069023.4 ENSMUST00000134707.2 |
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| CDS TCA 72 bp | GCCCATGATGGGGTATCCAGAATGAAGGAAACCGAATaGAATCTGCTTGTCAAGTACGACCCTCTCAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: AHDGVSRMKETE*NLLVKYDPLSS Trigger: AGAGCTGAGAGGGTCGTACTTGACAAGCAGATTTCATTCGGTTTCCTTCATTCTGGATACCCCATCATGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069023.4 |
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| CDS GCA 72 bp | CTTGTGCAACCTGCCCTTCAGGTAAGTACAGTCCAGTaGTCACCCAGGAGTTGTCATTGTCTGTGCTTATTT | + |
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Preference number: 6 (lower is better) Translates to: LVQPALQVSTVQ*SPRSCHCLCLF Trigger: AAATAAGCACAGACAATGACAACTCCTGGGTGAGCACTGGACTGTACTTACCTGAAGGGCAGGTTGCACAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069023.4 |
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| CDS CCA 72 bp | GCTTTGCTGTGTGTGATAAGATTCTTCCATTCCTCCTaGGTCGTCTTACCCAGCCTGAAGTATGGAGCAGAT | + |
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Preference number: 6 (lower is better) Translates to: ALLCVIRFFHSS*VVLPSLKYGAD Trigger: ATCTGCTCCATACTTCAGGCTGGGTAAGACGACCCAGGAGGAATGGAAGAATCTTATCACACACAGCAAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069023.4 |
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| CDS CCA 72 bp | ATAATCCAGTTGCTCAGAGGTGCTCCCTTGTTCAGGTaGTATTTGATCCTCTGCCTCCTAAGCTCAGGATTC | + |
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Preference number: 6 (lower is better) Translates to: IIQLLRGAPLFR*YLILCLLSSGF Trigger: GAATCCTGAGCTTAGGAGGCAGAGGATCAAATACCACCTGAACAAGGGAGCACCTCTGAGCAACTGGATTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069023.4 |
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| CDS CAA 72 bp | ACTCAAATTGAGACAGGGCTCTCCGAAAGTGATAGTTaGTCCCTTCAGGATTGGGGAATGGGAAACTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: TQIETGLSESDS*SLQDWGMGNCL Trigger: GAGGCAGTTTCCCATTCCCCAATCCTGAAGGGACAAACTATCACTTTCGGAGAGCCCTGTCTCAATTTGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069023.4 |
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| CDS CAA 72 bp | ATGATATTGTCTGTGGCTAGTTCTCCCCACGGAGCTTaGCTGTGTGTGATAAGATTCTTCCATTCCTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: MILSVASSPHGA*LCVIRFFHSSW Trigger: CCAGGAGGAATGGAAGAATCTTATCACACACAGCAAAGCTCCGTGGGGAGAACTAGCCACAGACAATATCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069023.4 |
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| CDS CAA 90 bp | TGCCCTTCAGGTAAGTACAGTCCAGTGCTCACCCAGGAGTTGTCATaGTCTGTGCTTATTTTAATGGTTATTGGAGATTCTGTAGGAGGT | + |
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Preference number: 6 (lower is better) Translates to: CPSGKYSPVLTQELS*SVLILMVIGDSVGG Trigger: ACCTCCTACAGAATCTCCAATAACCATTAAAATAAGCACAGACAATGACAACTCCTGGGTGAGCACTGGACTGTACTTACCTGAAGGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069023.4 |
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| CDS CAA 90 bp | GCAACCTGCCCTTCAGGTAAGTACAGTCCAGTGCTCACCCAGGAGTaGTCATTGTCTGTGCTTATTTTAATGGTTATTGGAGATTCTGTA | + |
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Preference number: 6 (lower is better) Translates to: ATCPSGKYSPVLTQE*SLSVLILMVIGDSV Trigger: TACAGAATCTCCAATAACCATTAAAATAAGCACAGACAATGACAACTCCTGGGTGAGCACTGGACTGTACTTACCTGAAGGGCAGGTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069023.4 |
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| CDS TCA 72 bp | GAGGGGGAAGTAGCTGAGATCTGTCAACTCCGGATTTaGATAATTCATAAGCCAGGGATAGAAGAAAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: EGEVAEICQLRI*IIHKPGIEEKP Trigger: AGGCTTTTCTTCTATCCCTGGCTTATGAATTATTCAAATCCGGAGTTGACAGATCTCAGCTACTTCCCCCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069023.4 |
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| CDS CAA 90 bp | TGGCCCAGTTCATGTATCACACCCCAAATGCCATGTGATCTTATTTaGAACTCGCTGATGATGCCTTCTACTATACTAATTAGGCCCATG | + |
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Preference number: 6 (lower is better) Translates to: WPSSCITPQMPCDLI*NSLMMPSTILIRPM Trigger: CATGGGCCTAATTAGTATAGTAGAAGGCATCATCAGCGAGTTCAAAATAAGATCACATGGCATTTGGGGTGTGATACATGAACTGGGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069023.4 |
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| CDS GCA 72 bp | CGATCGGGTATTGTTCAGTCACACTTGGAAAGTCCTTaGTTTGGATCATTTTCAGAGCATGTTTCTTCACAG | + |
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Preference number: 6 (lower is better) Translates to: RSGIVQSHLESP*FGSFSEHVSSQ Trigger: CTGTGAAGAAACATGCTCTGAAAATGATCCAAAGCAAGGACTTTCCAAGTGTGACTGAACAATACCCGATCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069023.4 |
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| CDS CAA 72 bp | CGGGTATTGTTCAGTCACACTTGGAAAGTCCTTGCTTaGGATCATTTTCAGAGCATGTTTCTTCACAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: RVLFSHTWKVLA*DHFQSMFLHRV Trigger: GACTCTGTGAAGAAACATGCTCTGAAAATGATCCAAAGCAAGGACTTTCCAAGTGTGACTGAACAATACCCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069023.4 |
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| CDS CAA 72 bp | GCGATCGGGTATTGTTCAGTCACACTTGGAAAGTCCTaGCTTTGGATCATTTTCAGAGCATGTTTCTTCACA | + |
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Preference number: 6 (lower is better) Translates to: AIGYCSVTLGKS*LWIIFRACFFT Trigger: TGTGAAGAAACATGCTCTGAAAATGATCCAAAGCAAGGACTTTCCAAGTGTGACTGAACAATACCCGATCGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069023.4 |
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| CDS CAA 72 bp | CCTTCAGGTAAGTACAGTCCAGTGCTCACCCAGGAGTaGTCATTGTCTGTGCTTATTTTAATGGTTATTGGA | + |
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Preference number: 6 (lower is better) Translates to: PSGKYSPVLTQE*SLSVLILMVIG Trigger: TCCAATAACCATTAAAATAAGCACAGACAATGACAACTCCTGGGTGAGCACTGGACTGTACTTACCTGAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069023.4 |
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| CDS CAA 72 bp | GGTAAGTACAGTCCAGTGCTCACCCAGGAGTTGTCATaGTCTGTGCTTATTTTAATGGTTATTGGAGATTCT | + |
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Preference number: 6 (lower is better) Translates to: GKYSPVLTQELS*SVLILMVIGDS Trigger: AGAATCTCCAATAACCATTAAAATAAGCACAGACAATGACAACTCCTGGGTGAGCACTGGACTGTACTTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069023.4 |
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| CDS CAA 72 bp | TCATGTATCACACCCCAAATGCCATGTGATCTTATTTaGAACTCGCTGATGATGCCTTCTACTATACTAATT | + |
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Preference number: 6 (lower is better) Translates to: SCITPQMPCDLI*NSLMMPSTILI Trigger: AATTAGTATAGTAGAAGGCATCATCAGCGAGTTCAAAATAAGATCACATGGCATTTGGGGTGTGATACATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069023.4 |
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