Pregenerated sensors for TCAF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029851Ensembl transcript IDs: ENSMUST00000031879.5
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAAAGCATAAAAACAAGAGGCGGAGCCAGGGTCTCTCCTCAGGAATaGGAAGACACCATCACAGGGCTCTACATCCTACAGAGAAGTGGT | + |
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Preference number: 1 (lower is better) Translates to: KSIKTRGGARVSPQE*EDTITGLYILQRSG Trigger: ACCACTTCTCTGTAGGATGTAGAGCCCTGTGATGGTGTCTTCTCATTCCTGAGGAGAGACCCTGGCTCCGCCTCTTGTTTTTATGCTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| 3UTR CCA 90 bp | ATGTACAAAGCATCTGCCAGGGGATACTGGTGGTATCTGAGGAAATaGTCCCTGAAATTGGGATGTGCTGATGGGATGTGGAAAGGGACA | + |
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Preference number: 1 (lower is better) Translates to: MYKASARGYWWYLRK*SLKLGCADGMWKGT Trigger: TGTCCCTTTCCACATCCCATCAGCACATCCCAATTTCAGGGACCATTTCCTCAGATACCACCAGTATCCCCTGGCAGATGCTTTGTACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| 3UTR GCA 90 bp | TCATGTAGCAAGTATCTTCTTAATGTTTTTCATGTACAAAGCATCTaGCAGGGGATACTGGTGGTATCTGAGGAAATGGTCCCTGAAATT | + |
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Preference number: 1 (lower is better) Translates to: SCSKYLLNVFHVQSI*QGILVVSEEMVPEI Trigger: AATTTCAGGGACCATTTCCTCAGATACCACCAGTATCCCCTGGCAGATGCTTTGTACATGAAAAACATTAAGAAGATACTTGCTACATGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| 3UTR-3UTR CCA 90 bp | CAGGGTCTCTCCTCAGGAATGAGAAGACACCATCACAGGGCTCTACATCCTACAGCCAGGGGATACTGGTaGTATCTGAGGAAATGGTCC | + |
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Preference number: 2 (lower is better) Translates to: QGLSSGMRRHHHRALHPTARGYW*YLRKWS Trigger: GGACCATTTCCTCAGATACCACCAGTATCCCCTGGC...TGTAGGATGTAGAGCCCTGTGATGGTGTCTTCTCATTCCTGAGGAGAGACCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| 3UTR-3UTR TCA 90 bp | AAGCTGAAGAAAGCCGACTCTCCTCCCAGCAGCCATAGACTGCTAACAGATCTCGACATCTGTGAAATCTaGCACTTTCTCTTCTCAGTC | + |
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Preference number: 2 (lower is better) Translates to: KLKKADSPPSSHRLLTDLDICEI*HFLFSV Trigger: GACTGAGAAGAGAAAGTGTCAGATTTCACAGATGTC...GAGATCTGTTAGCAGTCTATGGCTGCTGGGAGGAGAGTCGGCTTTCTTCAGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| 3UTR-3UTR CCA 90 bp | AAGCTGAAGAAAGCCGACTCTCCTCCCAGCAGCCATAGACTGCTAACAGATCTCGTGGAAGATTATCCATaGAACTCAGAGAAAACGCTG | + |
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Preference number: 2 (lower is better) Translates to: KLKKADSPPSSHRLLTDLVEDYP*NSEKTL Trigger: CAGCGTTTTCTCTGAGTTCCATGGATAATCTTCCAC...GAGATCTGTTAGCAGTCTATGGCTGCTGGGAGGAGAGTCGGCTTTCTTCAGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| 3UTR-3UTR CCA 90 bp | AAGCTGAAGAAAGCCGACTCTCCTCCCAGCAGCCATAGACTGCTAACAGATCTCTGTGCTGATGGGATGTaGAAAGGGACATTCAAAATA | + |
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Preference number: 2 (lower is better) Translates to: KLKKADSPPSSHRLLTDLCADGM*KGTFKI Trigger: TATTTTGAATGTCCCTTTCCACATCCCATCAGCACA...GAGATCTGTTAGCAGTCTATGGCTGCTGGGAGGAGAGTCGGCTTTCTTCAGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| 3UTR-3UTR CCA 90 bp | TGTGTTCATTTCAAAGCCCATAGTGCTGCCTATATGTGTGCTGGTGTACGGCATTGGTATCTGAGGAAATaGTCCCTGAAATTGGGATGT | + |
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Preference number: 2 (lower is better) Translates to: CVHFKAHSAAYMCAGVRHWYLRK*SLKLGC Trigger: ACATCCCAATTTCAGGGACCATTTCCTCAGATACCA...ATGCCGTACACCAGCACACATATAGGCAGCACTATGGGCTTTGAAATGAACACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| 3UTR-3UTR TCA 90 bp | GTTTGGGAAATGAACTTCCTTGGTTTAAATATTTTTCCAAGGCTGGTTTCCTCTGAAATTGGGATGTGCTaGTGGGATGTGGAAAGGGAC | + |
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Preference number: 2 (lower is better) Translates to: VWEMNFLGLNIFPRLVSSEIGMC*WDVERD Trigger: GTCCCTTTCCACATCCCATCAGCACATCCCAATTTC...AGAGGAAACCAGCCTTGGAAAAATATTTAAACCAAGGAAGTTCATTTCCCAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| 3UTR-3UTR GCA 90 bp | TTCCTCTCAAGGCAGATGAATCTTGAGGTAAAGGGAAGATTAATTGCGAAAAAGGTGAAGCTAGTACTATaGCTTATCTCACCCATTTCA | + |
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Preference number: 2 (lower is better) Translates to: FLSRQMNLEVKGRLIAKKVKLVL*LISPIS Trigger: TGAAATGGGTGAGATAAGGCATAGTACTAGCTTCAC...CTTTTTCGCAATTAATCTTCCCTTTACCTCAAGATTCATCTGCCTTGAGAGGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| 3UTR TCA 72 bp | AAAACAAGAGGCGGAGCCAGGGTCTCTCCTCAGGAATaGGAAGACACCATCACAGGGCTCTACATCCTACAG | + |
|
Preference number: 3 (lower is better) Translates to: KTRGGARVSPQE*EDTITGLYILQ Trigger: CTGTAGGATGTAGAGCCCTGTGATGGTGTCTTCTCATTCCTGAGGAGAGACCCTGGCTCCGCCTCTTGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| 3UTR CCA 72 bp | GCATCTGCCAGGGGATACTGGTGGTATCTGAGGAAATaGTCCCTGAAATTGGGATGTGCTGATGGGATGTGG | + |
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Preference number: 3 (lower is better) Translates to: ASARGYWWYLRK*SLKLGCADGMW Trigger: CCACATCCCATCAGCACATCCCAATTTCAGGGACCATTTCCTCAGATACCACCAGTATCCCCTGGCAGATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| 3UTR-3UTR CAA 90 bp | TGTGTTCATTTCAAAGCCCATAGTGCTGCCTATATGTGTGCTGGTGTACGGCATAAATGGTCCCTGAAATaGGGATGTGCTGATGGGATG | + |
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Preference number: 3 (lower is better) Translates to: CVHFKAHSAAYMCAGVRHKWSLK*GCADGM Trigger: CATCCCATCAGCACATCCCAATTTCAGGGACCATTT...ATGCCGTACACCAGCACACATATAGGCAGCACTATGGGCTTTGAAATGAACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| 3UTR CCA 72 bp | TTTTTCATGTACAAAGCATCTGCCAGGGGATACTGGTaGTATCTGAGGAAATGGTCCCTGAAATTGGGATGT | + |
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Preference number: 3 (lower is better) Translates to: FFMYKASARGYW*YLRKWSLKLGC Trigger: ACATCCCAATTTCAGGGACCATTTCCTCAGATACCACCAGTATCCCCTGGCAGATGCTTTGTACATGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| 3UTR CCA 72 bp | ATGTTTTTCATGTACAAAGCATCTGCCAGGGGATACTaGTGGTATCTGAGGAAATGGTCCCTGAAATTGGGA | + |
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Preference number: 3 (lower is better) Translates to: MFFMYKASARGY*WYLRKWSLKLG Trigger: TCCCAATTTCAGGGACCATTTCCTCAGATACCACCAGTATCCCCTGGCAGATGCTTTGTACATGAAAAACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| 3UTR TCA 72 bp | GTATCTGAGGAAATGGTCCCTGAAATTGGGATGTGCTaGTGGGATGTGGAAAGGGACATTCAAAATATATTT | + |
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Preference number: 3 (lower is better) Translates to: VSEEMVPEIGMC*WDVERDIQNIF Trigger: AAATATATTTTGAATGTCCCTTTCCACATCCCATCAGCACATCCCAATTTCAGGGACCATTTCCTCAGATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| 3UTR TCA 72 bp | TTCCAAGGCTGGTTTCCTCTCAAGGCAGATGAATCTTaGGGTAAAGGGAAGATTAATTGCGAAAAAGATTTA | + |
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Preference number: 3 (lower is better) Translates to: FQGWFPLKADES*GKGKINCEKDL Trigger: TAAATCTTTTTCGCAATTAATCTTCCCTTTACCTCAAGATTCATCTGCCTTGAGAGGAAACCAGCCTTGGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| 3UTR TCA 72 bp | CTACAATCTATCGCTGTTATGGACATCTGTGAAATCTaGCACTTTCTCTTCTCAGTCTTGACTAAAGAAGTT | + |
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Preference number: 3 (lower is better) Translates to: LQSIAVMDICEI*HFLFSVLTKEV Trigger: AACTTCTTTAGTCAAGACTGAGAAGAGAAAGTGTCAGATTTCACAGATGTCCATAACAGCGATAGATTGTAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| 3UTR TCA 72 bp | ACATCTGTGAAATCTGACACTTTCTCTTCTCAGTCTTaGCTAAAGAAGTTGTTTAACATCCATGCCATTTTC | + |
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Preference number: 3 (lower is better) Translates to: TSVKSDTFSSQS*LKKLFNIHAIF Trigger: GAAAATGGCATGGATGTTAAACAACTTCTTTAGTCAAGACTGAGAAGAGAAAGTGTCAGATTTCACAGATGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| 3UTR TCA 72 bp | TTAGTTGAGAATTCTATACATGTATATAAGGTGCTTTaGTCAAAACCATTTCCCATGTCCTCATTCATCCCC | + |
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Preference number: 3 (lower is better) Translates to: LVENSIHVYKVL*SKPFPMSSFIP Trigger: GGGGATGAATGAGGACATGGGAAATGGTTTTGATCAAAGCACCTTATATACATGTATAGAATTCTCAACTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS-3UTR TCA 90 bp | GGGACCACAAAGCTGAAGAAAGCCGACTCTCCTCCCAGCAGCCATAGACTGCTAAGGCCTGACCTCCAATaGGCAAGCCTCCACCACGCT | + |
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Preference number: 4 (lower is better) Translates to: GTTKLKKADSPPSSHRLLRPDLQ*ASLHHA Trigger: AGCGTGGTGGAGGCTTGCTCATTGGAGGTCAGGCCT...TAGCAGTCTATGGCTGCTGGGAGGAGAGTCGGCTTTCTTCAGCTTTGTGGTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS-3UTR GCA 90 bp | GGGACCACAAAGCTGAAGAAAGCCGACTCTCCTCCCAGCAGCCATAGACTGCTAGAGCATGGCCTCATGTaGAGCCAACACCACACGACC | + |
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Preference number: 4 (lower is better) Translates to: GTTKLKKADSPPSSHRLLEHGLM*SQHHTT Trigger: GGTCGTGTGGTGTTGGCTGCACATGAGGCCATGCTC...TAGCAGTCTATGGCTGCTGGGAGGAGAGTCGGCTTTCTTCAGCTTTGTGGTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS-3UTR GCA 90 bp | GGGACCACAAAGCTGAAGAAAGCCGACTCTCCTCCCAGCAGCCATAGACTGCTAATGGGGTATCCTGAATaGATCCAGCCGGCTGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: GTTKLKKADSPPSSHRLLMGYPE*IQPAES Trigger: GCTCTCAGCCGGCTGGATGCATTCAGGATACCCCAT...TAGCAGTCTATGGCTGCTGGGAGGAGAGTCGGCTTTCTTCAGCTTTGTGGTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS-3UTR CCA 90 bp | AAGCTGAAGAAAGCCGACTCTCCTCCCAGCAGCCATAGACTGCTAACAGATCTCCCCTGTGCAGGAATCTaGAGAAAGCCTGCTCCATCT | + |
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Preference number: 4 (lower is better) Translates to: KLKKADSPPSSHRLLTDLPCAGI*RKPAPS Trigger: AGATGGAGCAGGCTTTCTCCAGATTCCTGCACAGGG...GAGATCTGTTAGCAGTCTATGGCTGCTGGGAGGAGAGTCGGCTTTCTTCAGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS-3UTR TCA 90 bp | TCAAAGCCCATAGTGCTGCCTATATGTGTGCTGGTGTACGGCATAGGTAGCCTCCTCATGAACATAGACTaGCCAGAGATTGCAGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: SKPIVLPICVLVYGIGSLLMNID*PEIAGG Trigger: GCCACCTGCAATCTCTGGTCAGTCTATGTTCATGAG...GAGGCTACCTATGCCGTACACCAGCACACATATAGGCAGCACTATGGGCTTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS-3UTR GCA 90 bp | CAGGGTCTCTCCTCAGGAATGAGAAGACACCATCACAGGGCTCTACATCCTACAATAGCACCTTGTCACTaGCATGCTGACTGGCCCAAT | + |
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Preference number: 4 (lower is better) Translates to: QGLSSGMRRHHHRALHPTIAPCH*HADWPN Trigger: ATTGGGCCAGTCAGCATGGCAGTGACAAGGTGCTAT...TGTAGGATGTAGAGCCCTGTGATGGTGTCTTCTCATTCCTGAGGAGAGACCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS-3UTR GCA 90 bp | GGGACCACAAAGCTGAAGAAAGCCGACTCTCCTCCCAGCAGCCATAGACTGCTAAATGGGACTCCAGACTaGATTTCAAGCCATGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: GTTKLKKADSPPSSHRLLNGTPD*ISSHAS Trigger: TGAAGCATGGCTTGAAATGCAGTCTGGAGTCCCATT...TAGCAGTCTATGGCTGCTGGGAGGAGAGTCGGCTTTCTTCAGCTTTGTGGTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS-3UTR GCA 90 bp | GGGACCACAAAGCTGAAGAAAGCCGACTCTCCTCCCAGCAGCCATAGACTGCTACAACCCTCCACCCTCTaGTACAAACTCCTGTATTTT | + |
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Preference number: 4 (lower is better) Translates to: GTTKLKKADSPPSSHRLLQPSTL*YKLLYF Trigger: AAAATACAGGAGTTTGTAGCAGAGGGTGGAGGGTTG...TAGCAGTCTATGGCTGCTGGGAGGAGAGTCGGCTTTCTTCAGCTTTGTGGTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS-3UTR CCA 90 bp | TCAAAGCCCATAGTGCTGCCTATATGTGTGCTGGTGTACGGCATAGGTAGCCTCTTGGAGCAGAGGCTCTaGATTCTCCAGAGTCTTGAG | + |
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Preference number: 4 (lower is better) Translates to: SKPIVLPICVLVYGIGSLLEQRL*ILQSLE Trigger: CTCAAGACTCTGGAGAATCCAGAGCCTCTGCTCCAA...GAGGCTACCTATGCCGTACACCAGCACACATATAGGCAGCACTATGGGCTTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS-3UTR TCA 90 bp | AAGCTGAAGAAAGCCGACTCTCCTCCCAGCAGCCATAGACTGCTAACAGATCTCCCAATATTATCTTCCTaGCCTCTGGACAACCAGCGT | + |
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Preference number: 4 (lower is better) Translates to: KLKKADSPPSSHRLLTDLPILSS*PLDNQR Trigger: ACGCTGGTTGTCCAGAGGTCAGGAAGATAATATTGG...GAGATCTGTTAGCAGTCTATGGCTGCTGGGAGGAGAGTCGGCTTTCTTCAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS-3UTR GCA 90 bp | TGTGTTCATTTCAAAGCCCATAGTGCTGCCTATATGTGTGCTGGTGTACGGCATTACCTAAAGCAGAGCTaGCTGGGTTCTGGGAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: CVHFKAHSAAYMCAGVRHYLKQS*LGSGKP Trigger: GGGCTTCCCAGAACCCAGGCAGCTCTGCTTTAGGTA...ATGCCGTACACCAGCACACATATAGGCAGCACTATGGGCTTTGAAATGAACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS-3UTR GCA 90 bp | TGTGTTCATTTCAAAGCCCATAGTGCTGCCTATATGTGTGCTGGTGTACGGCATCTGCACCTTCAGACCTaGAGAGGCAGCAGGTTCAGA | + |
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Preference number: 4 (lower is better) Translates to: CVHFKAHSAAYMCAGVRHLHLQT*RGSRFR Trigger: TCTGAACCTGCTGCCTCTGCAGGTCTGAAGGTGCAG...ATGCCGTACACCAGCACACATATAGGCAGCACTATGGGCTTTGAAATGAACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS-3UTR GCA 90 bp | TCAAAGCCCATAGTGCTGCCTATATGTGTGCTGGTGTACGGCATAGGTAGCCTCAAGACCTCTTGGAGCTaGAGATATGTCTCCAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: SKPIVLPICVLVYGIGSLKTSWS*RYVSSA Trigger: AGCACTGGAGACATATCTGCAGCTCCAAGAGGTCTT...GAGGCTACCTATGCCGTACACCAGCACACATATAGGCAGCACTATGGGCTTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS-3UTR CCA 90 bp | TCAAAGCCCATAGTGCTGCCTATATGTGTGCTGGTGTACGGCATAGGTAGCCTCATTCTCTCAGGTCTTTaGAAAGGGAAGGGCTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: SKPIVLPICVLVYGIGSLILSGL*KGKGWL Trigger: AAGCCAGCCCTTCCCTTTCCAAAGACCTGAGAGAAT...GAGGCTACCTATGCCGTACACCAGCACACATATAGGCAGCACTATGGGCTTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS-3UTR GCA 90 bp | CAGGGTCTCTCCTCAGGAATGAGAAGACACCATCACAGGGCTCTACATCCTACAGATGCTAAGGAAGAATaGACTTCAATGGGAGTCCCT | + |
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Preference number: 4 (lower is better) Translates to: QGLSSGMRRHHHRALHPTDAKEE*TSMGVP Trigger: AGGGACTCCCATTGAAGTGCATTCTTCCTTAGCATC...TGTAGGATGTAGAGCCCTGTGATGGTGTCTTCTCATTCCTGAGGAGAGACCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS-3UTR GCA 90 bp | AAGCTGAAGAAAGCCGACTCTCCTCCCAGCAGCCATAGACTGCTAACAGATCTCCGTTGTAGGCATCAATaGAATAAACTCCCAGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: KLKKADSPPSSHRLLTDLRCRHQ*NKLPEP Trigger: AGGCTCTGGGAGTTTATTGCATTGATGCCTACAACG...GAGATCTGTTAGCAGTCTATGGCTGCTGGGAGGAGAGTCGGCTTTCTTCAGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS-3UTR CCA 90 bp | TGTGTTCATTTCAAAGCCCATAGTGCTGCCTATATGTGTGCTGGTGTACGGCATGATAGGAAAACAGCCTaGGCTGACTGTCCGAGGCAA | + |
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Preference number: 4 (lower is better) Translates to: CVHFKAHSAAYMCAGVRHDRKTA*ADCPRQ Trigger: TTGCCTCGGACAGTCAGCCCAGGCTGTTTTCCTATC...ATGCCGTACACCAGCACACATATAGGCAGCACTATGGGCTTTGAAATGAACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| 3UTR CAA 72 bp | GGATACTGGTGGTATCTGAGGAAATGGTCCCTGAAATaGGGATGTGCTGATGGGATGTGGAAAGGGACATTC | + |
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Preference number: 4 (lower is better) Translates to: GYWWYLRKWSLK*GCADGMWKGTF Trigger: GAATGTCCCTTTCCACATCCCATCAGCACATCCCAATTTCAGGGACCATTTCCTCAGATACCACCAGTATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS-3UTR GCA 90 bp | TATCCCCTCCTAAATTCATGTGTTCATTTCAAAGCCCATAGTGCTGCCTATATGCACAGCTGGGAGGCCTaGCTGTCGCAGTATCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: YPLLNSCVHFKAHSAAYMHSWEA*LSQYLP Trigger: AGGAAGATACTGCGACAGGCAGGCCTCCCAGCTGTG...CATATAGGCAGCACTATGGGCTTTGAAATGAACACATGAATTTAGGAGGGGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS-3UTR GCA 90 bp | TCAAAGCCCATAGTGCTGCCTATATGTGTGCTGGTGTACGGCATAGGTAGCCTCACTGCTAAGGTTATGTaGTATCTGGGAGCAATCACT | + |
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Preference number: 4 (lower is better) Translates to: SKPIVLPICVLVYGIGSLTAKVM*YLGAIT Trigger: AGTGATTGCTCCCAGATAGCACATAACCTTAGCAGT...GAGGCTACCTATGCCGTACACCAGCACACATATAGGCAGCACTATGGGCTTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS-3UTR GCA 90 bp | TCAAAGCCCATAGTGCTGCCTATATGTGTGCTGGTGTACGGCATAGGTAGCCTCGCCATATGTTCATCTTaGACTCATTGTCTTCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: SKPIVLPICVLVYGIGSLAICSS*THCLQG Trigger: TCCCTGAAGACAATGAGTGCAAGATGAACATATGGC...GAGGCTACCTATGCCGTACACCAGCACACATATAGGCAGCACTATGGGCTTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS-3UTR CCA 90 bp | TTCCTCTCAAGGCAGATGAATCTTGAGGTAAAGGGAAGATTAATTGCGAAAAAGTTCAATGGGAGTCCCTaGGGAGGGGCAGAGCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: FLSRQMNLEVKGRLIAKKFNGSP*GGAEPA Trigger: AGCTGGCTCTGCCCCTCCCCAGGGACTCCCATTGAA...CTTTTTCGCAATTAATCTTCCCTTTACCTCAAGATTCATCTGCCTTGAGAGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS-3UTR CCA 90 bp | TGTGTTCATTTCAAAGCCCATAGTGCTGCCTATATGTGTGCTGGTGTACGGCATGACATCACGGTCACCTaGATTGGTTCCATTGATCTC | + |
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Preference number: 4 (lower is better) Translates to: CVHFKAHSAAYMCAGVRHDITVT*IGSIDL Trigger: GAGATCAATGGAACCAATCCAGGTGACCGTGATGTC...ATGCCGTACACCAGCACACATATAGGCAGCACTATGGGCTTTGAAATGAACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS-3UTR TCA 90 bp | GTTTGGGAAATGAACTTCCTTGGTTTAAATATTTTTCCAAGGCTGGTTTCCTCTGCCCAATTCCAGGCCTaGCCTCCAATGAGCAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: VWEMNFLGLNIFPRLVSSAQFQA*PPMSKP Trigger: AGGCTTGCTCATTGGAGGTCAGGCCTGGAATTGGGC...AGAGGAAACCAGCCTTGGAAAAATATTTAAACCAAGGAAGTTCATTTCCCAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS-3UTR TCA 90 bp | GTTTGGGAAATGAACTTCCTTGGTTTAAATATTTTTCCAAGGCTGGTTTCCTCTGAAAACAGCCTGGGCTaGCTGTCCGAGGCAAAATGC | + |
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Preference number: 4 (lower is better) Translates to: VWEMNFLGLNIFPRLVSSENSLG*LSEAKC Trigger: GCATTTTGCCTCGGACAGTCAGCCCAGGCTGTTTTC...AGAGGAAACCAGCCTTGGAAAAATATTTAAACCAAGGAAGTTCATTTCCCAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS-3UTR CCA 90 bp | GTTTGGGAAATGAACTTCCTTGGTTTAAATATTTTTCCAAGGCTGGTTTCCTCTAAGAATGCACTTCAATaGGAGTCCCTGGGGAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: VWEMNFLGLNIFPRLVSSKNALQ*ESLGRG Trigger: GCCCCTCCCCAGGGACTCCCATTGAAGTGCATTCTT...AGAGGAAACCAGCCTTGGAAAAATATTTAAACCAAGGAAGTTCATTTCCCAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS-3UTR CCA 90 bp | GTTTGGGAAATGAACTTCCTTGGTTTAAATATTTTTCCAAGGCTGGTTTCCTCTCTGAGGAGGAGAGATTaGAGGAGCAGGTCTGACTGC | + |
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Preference number: 4 (lower is better) Translates to: VWEMNFLGLNIFPRLVSSLRRRD*RSRSDC Trigger: GCAGTCAGACCTGCTCCTCCAATCTCTCCTCCTCAG...AGAGGAAACCAGCCTTGGAAAAATATTTAAACCAAGGAAGTTCATTTCCCAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS-3UTR TCA 90 bp | TTCCTCTCAAGGCAGATGAATCTTGAGGTAAAGGGAAGATTAATTGCGAAAAAGTTGGAGGAGCAGGTCTaGCTGCTAAGGTTATGTGCT | + |
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Preference number: 4 (lower is better) Translates to: FLSRQMNLEVKGRLIAKKLEEQV*LLRLCA Trigger: AGCACATAACCTTAGCAGTCAGACCTGCTCCTCCAA...CTTTTTCGCAATTAATCTTCCCTTTACCTCAAGATTCATCTGCCTTGAGAGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS-3UTR GCA 90 bp | GTTTGGGAAATGAACTTCCTTGGTTTAAATATTTTTCCAAGGCTGGTTTCCTCTCCAGTTTTGCAGGGGTaGTCCCTTCTGAAGGTGTTC | + |
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Preference number: 4 (lower is better) Translates to: VWEMNFLGLNIFPRLVSSPVLQG*SLLKVF Trigger: GAACACCTTCAGAAGGGAGCACCCCTGCAAAACTGG...AGAGGAAACCAGCCTTGGAAAAATATTTAAACCAAGGAAGTTCATTTCCCAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS-3UTR GCA 90 bp | TATCCCCTCCTAAATTCATGTGTTCATTTCAAAGCCCATAGTGCTGCCTATATGCTGGTCACTATAAGCTaGACAGCAGTAGACACACAT | + |
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Preference number: 4 (lower is better) Translates to: YPLLNSCVHFKAHSAAYMLVTIS*TAVDTH Trigger: ATGTGTGTCTACTGCTGTGCAGCTTATAGTGACCAG...CATATAGGCAGCACTATGGGCTTTGAAATGAACACATGAATTTAGGAGGGGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS-3UTR CCA 90 bp | TATCCCCTCCTAAATTCATGTGTTCATTTCAAAGCCCATAGTGCTGCCTATATGAAGTTCCCCTCCTTGTaGTTCAACATAGCTTGGAAC | + |
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Preference number: 4 (lower is better) Translates to: YPLLNSCVHFKAHSAAYMKFPSL*FNIAWN Trigger: GTTCCAAGCTATGTTGAACCACAAGGAGGGGAACTT...CATATAGGCAGCACTATGGGCTTTGAAATGAACACATGAATTTAGGAGGGGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS-3UTR TCA 90 bp | GTTTGGGAAATGAACTTCCTTGGTTTAAATATTTTTCCAAGGCTGGTTTCCTCTAGGGGTGCTCCCTTCTaGAGGTGTTCTTTAATTCTC | + |
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Preference number: 4 (lower is better) Translates to: VWEMNFLGLNIFPRLVSSRGAPF*RCSLIL Trigger: GAGAATTAAAGAACACCTTCAGAAGGGAGCACCCCT...AGAGGAAACCAGCCTTGGAAAAATATTTAAACCAAGGAAGTTCATTTCCCAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS-3UTR GCA 90 bp | TTCCTCTCAAGGCAGATGAATCTTGAGGTAAAGGGAAGATTAATTGCGAAAAAGCTGCATTTCAAGCCATaGTTCAACAATAGGGAATTC | + |
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Preference number: 4 (lower is better) Translates to: FLSRQMNLEVKGRLIAKKLHFKP*FNNREF Trigger: GAATTCCCTATTGTTGAAGCATGGCTTGAAATGCAG...CTTTTTCGCAATTAATCTTCCCTTTACCTCAAGATTCATCTGCCTTGAGAGGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| 3UTR CAA 72 bp | TCACCCCCTCCAATTATAATTAAGAATGCCACCAGTTaGGGAAATGAACTTCCTTGGTTTAAATATTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: SPPPIIIKNATS*GNELPWFKYFS Trigger: GGAAAAATATTTAAACCAAGGAAGTTCATTTCCCAAACTGGTGGCATTCTTAATTATAATTGGAGGGGGTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS GCA 90 bp | CGGTTCCCACCCAAAGACCTCTTGGAGCTGCAGATATGTCTCCAGTaGTGTCCAGACATTCCAGTTTTGCAGGGGTGCTCCCTTCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: RFPPKDLLELQICLQ*CPDIPVLQGCSLLK Trigger: CTTCAGAAGGGAGCACCCCTGCAAAACTGGAATGTCTGGACAGCACTGGAGACATATCTGCAGCTCCAAGAGGTCTTTGGGTGGGAACCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS-3UTR CAA 90 bp | CAGGGTCTCTCCTCAGGAATGAGAAGACACCATCACAGGGCTCTACATCCTACATTCTTCAGGTTTCAGTaGAGGGTGGGCCTGAGCCCT | + |
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Preference number: 5 (lower is better) Translates to: QGLSSGMRRHHHRALHPTFFRFQ*RVGLSP Trigger: AGGGCTCAGGCCCACCCTCAACTGAAACCTGAAGAA...TGTAGGATGTAGAGCCCTGTGATGGTGTCTTCTCATTCCTGAGGAGAGACCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS CCA 90 bp | CCAGTCCTGACATCCAACATAGAGATTCCATCCAGAAGCTGGTCCTaGTCATGTCTGAGCTCCTCCCAACACCTGATATACAGTGGGATC | + |
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Preference number: 5 (lower is better) Translates to: PVLTSNIEIPSRSWS*SCLSSSQHLIYSGI Trigger: GATCCCACTGTATATCAGGTGTTGGGAGGAGCTCAGACATGACCAGGACCAGCTTCTGGATGGAATCTCTATGTTGGATGTCAGGACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS CCA 90 bp | ACACCCCCAGTCCTGACATCCAACATAGAGATTCCATCCAGAAGCTaGTCCTGGTCATGTCTGAGCTCCTCCCAACACCTGATATACAGT | + |
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Preference number: 5 (lower is better) Translates to: TPPVLTSNIEIPSRS*SWSCLSSSQHLIYS Trigger: ACTGTATATCAGGTGTTGGGAGGAGCTCAGACATGACCAGGACCAGCTTCTGGATGGAATCTCTATGTTGGATGTCAGGACTGGGGGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS-3UTR CAA 90 bp | GTCTTAGGACATGCACTGACTGTTCCTTCTGTGTCAGGAGACTTTAGTGACCTTGACCACCAGGCGGCCTaGGCCATAGAAAGAAACAGC | + |
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Preference number: 5 (lower is better) Translates to: VLGHALTVPSVSGDFSDLDHQAA*AIERNS Trigger: GCTGTTTCTTTCTATGGCCAAGGCCGCCTGGTGGTC...AAGGTCACTAAAGTCTCCTGACACAGAAGGAACAGTCAGTGCATGTCCTAAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS-3UTR CAA 90 bp | CAGGGTCTCTCCTCAGGAATGAGAAGACACCATCACAGGGCTCTACATCCTACAGTGGTTCAACATAGCTaGGAACTCAGAAAGAGCCCC | + |
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Preference number: 5 (lower is better) Translates to: QGLSSGMRRHHHRALHPTVVQHS*ELRKSP Trigger: GGGGCTCTTTCTGAGTTCCAAGCTATGTTGAACCAC...TGTAGGATGTAGAGCCCTGTGATGGTGTCTTCTCATTCCTGAGGAGAGACCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS-3UTR CAA 90 bp | GGGACCACAAAGCTGAAGAAAGCCGACTCTCCTCCCAGCAGCCATAGACTGCTAAGCCATATGTTCATCTaGCACTCATTGTCTTCAGGG | + |
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Preference number: 5 (lower is better) Translates to: GTTKLKKADSPPSSHRLLSHMFI*HSLSSG Trigger: CCCTGAAGACAATGAGTGCAAGATGAACATATGGCT...TAGCAGTCTATGGCTGCTGGGAGGAGAGTCGGCTTTCTTCAGCTTTGTGGTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS-3UTR CAA 90 bp | TGTGTTCATTTCAAAGCCCATAGTGCTGCCTATATGTGTGCTGGTGTACGGCATAGACACAGGGCCCAGTaGACAGCCTTTGGGCACAAT | + |
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Preference number: 5 (lower is better) Translates to: CVHFKAHSAAYMCAGVRHRHRAQ*TAFGHN Trigger: ATTGTGCCCAAAGGCTGTCAACTGGGCCCTGTGTCT...ATGCCGTACACCAGCACACATATAGGCAGCACTATGGGCTTTGAAATGAACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS-3UTR CAA 90 bp | TGTGTTCATTTCAAAGCCCATAGTGCTGCCTATATGTGTGCTGGTGTACGGCATAACCAGCGTATAGCATaGAGCAAAAAGGGTTCCATC | + |
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Preference number: 5 (lower is better) Translates to: CVHFKAHSAAYMCAGVRHNQRIA*SKKGSI Trigger: GATGGAACCCTTTTTGCTCAATGCTATACGCTGGTT...ATGCCGTACACCAGCACACATATAGGCAGCACTATGGGCTTTGAAATGAACACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS-3UTR CAA 90 bp | TATCCCCTCCTAAATTCATGTGTTCATTTCAAAGCCCATAGTGCTGCCTATATGAGAGATCTCGGTGCTTaGTCCTTCCAGGAGGTAGAG | + |
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Preference number: 5 (lower is better) Translates to: YPLLNSCVHFKAHSAAYMRDLGA*SFQEVE Trigger: CTCTACCTCCTGGAAGGACAAAGCACCGAGATCTCT...CATATAGGCAGCACTATGGGCTTTGAAATGAACACATGAATTTAGGAGGGGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS GCA 72 bp | CCACGTAGGATGTTAACTAGTGATGCTAAGGAAGAATaGACTTCAATGGGAGTCCCTGGGGAGGGGCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: PRRMLTSDAKEE*TSMGVPGEGQS Trigger: GCTCTGCCCCTCCCCAGGGACTCCCATTGAAGTGCATTCTTCCTTAGCATCACTAGTTAACATCCTACGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS GCA 72 bp | GTCATCAGTGTGACATCCAATCTGCACCTTCAGACCTaGAGAGGCAGCAGGTTCAGAGACAGAGATCTCGGT | + |
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Preference number: 6 (lower is better) Translates to: VISVTSNLHLQT*RGSRFRDRDLG Trigger: ACCGAGATCTCTGTCTCTGAACCTGCTGCCTCTGCAGGTCTGAAGGTGCAGATTGGATGTCACACTGATGAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS GCA 72 bp | GTGATGAACGGTTCCCACCCAAAGACCTCTTGGAGCTaGAGATATGTCTCCAGTGCTGTCCAGACATTCCAG | + |
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Preference number: 6 (lower is better) Translates to: VMNGSHPKTSWS*RYVSSAVQTFQ Trigger: CTGGAATGTCTGGACAGCACTGGAGACATATCTGCAGCTCCAAGAGGTCTTTGGGTGGGAACCGTTCATCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS CCA 72 bp | GTCCTGACATCCAACATAGAGATTCCATCCAGAAGCTaGTCCTGGTCATGTCTGAGCTCCTCCCAACACCTG | + |
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Preference number: 6 (lower is better) Translates to: VLTSNIEIPSRS*SWSCLSSSQHL Trigger: CAGGTGTTGGGAGGAGCTCAGACATGACCAGGACCAGCTTCTGGATGGAATCTCTATGTTGGATGTCAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS CCA 72 bp | AAGAGGGTGATGAACGGTTCCCACCCAAAGACCTCTTaGAGCTGCAGATATGTCTCCAGTGCTGTCCAGACA | + |
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Preference number: 6 (lower is better) Translates to: KRVMNGSHPKTS*SCRYVSSAVQT Trigger: TGTCTGGACAGCACTGGAGACATATCTGCAGCTCCAAGAGGTCTTTGGGTGGGAACCGTTCATCACCCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS CAA 72 bp | CACTGCATTCGTGATGGTAACAGACACAGGGCCCAGTaGACAGCCTTTGGGCACAATGATGTACAGGAGACC | + |
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Preference number: 6 (lower is better) Translates to: HCIRDGNRHRAQ*TAFGHNDVQET Trigger: GGTCTCCTGTACATCATTGTGCCCAAAGGCTGTCAACTGGGCCCTGTGTCTGTTACCATCACGAATGCAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS TCA 72 bp | ACTGCATTCGTGATGGTAACAGACACAGGGCCCAGTTaGCAGCCTTTGGGCACAATGATGTACAGGAGACCA | + |
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Preference number: 6 (lower is better) Translates to: TAFVMVTDTGPS*QPLGTMMYRRP Trigger: TGGTCTCCTGTACATCATTGTGCCCAAAGGCTGTCAACTGGGCCCTGTGTCTGTTACCATCACGAATGCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS CCA 72 bp | ACATCCAACATAGAGATTCCATCCAGAAGCTGGTCCTaGTCATGTCTGAGCTCCTCCCAACACCTGATATAC | + |
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Preference number: 6 (lower is better) Translates to: TSNIEIPSRSWS*SCLSSSQHLIY Trigger: GTATATCAGGTGTTGGGAGGAGCTCAGACATGACCAGGACCAGCTTCTGGATGGAATCTCTATGTTGGATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS CCA 72 bp | GTTTCTTATATCTATATGAAGGATAGGAAAACAGCCTaGGCTGACTGTCCGAGGCAAAATGCTGAGGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: VSYIYMKDRKTA*ADCPRQNAEAK Trigger: TTTGGCCTCAGCATTTTGCCTCGGACAGTCAGCCCAGGCTGTTTTCCTATCCTTCATATAGATATAAGAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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| CDS GCA 72 bp | AGACACACATATCATCGGTCAAATGGGACTCCAGACTaGATTTCAAGCCATGCTTCAACAATAGGGAATTCA | + |
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Preference number: 6 (lower is better) Translates to: RHTYHRSNGTPD*ISSHASTIGNS Trigger: TGAATTCCCTATTGTTGAAGCATGGCTTGAAATGCAGTCTGGAGTCCCATTTGACCGATGATATGTGTGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031879.5 |
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