Pregenerated sensors for TCAF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036667Ensembl transcript IDs: ENSMUST00000045054.11, ENSMUST00000045140.5, ENSMUST00000121083.8
Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCCCAAGCTCCCAGCACTAGGCCAATACAGGGTCAGCAGGGTACCTaGCAACTGAGAAGCAGAGGGGTCGGGCTCATAAGCACAGACCTC | + |
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Preference number: 1 (lower is better) Translates to: SQAPSTRPIQGQQGT*QLRSRGVGLISTDL Trigger: GAGGTCTGTGCTTATGAGCCCGACCCCTCTGCTTCTCAGTTGTCAGGTACCCTGCTGACCCTGTATTGGCCTAGTGCTGGGAGCTTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
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| 3UTR CCA 90 bp | AGGAAGCCAAGGGAAGGATTGCCCTCTATGGCTCATCAAGAAGGCTaGATAGAAACAAATTCCCAAGCTCCCAGCACTAGGCCAATACAG | + |
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Preference number: 1 (lower is better) Translates to: RKPREGLPSMAHQEG*IETNSQAPSTRPIQ Trigger: CTGTATTGGCCTAGTGCTGGGAGCTTGGGAATTTGTTTCTATCCAGCCTTCTTGATGAGCCATAGAGGGCAATCCTTCCCTTGGCTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
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| 3UTR TCA 90 bp | ATTGAACTCATGTTTGAGGTCTTGGTGGCAAGTGTCTTTACACACTaGGCCCTCTCTCTGGCACTCCATAACAGTTATGTACTGTGTATT | + |
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Preference number: 1 (lower is better) Translates to: IELMFEVLVASVFTH*ALSLALHNSYVLCI Trigger: AATACACAGTACATAACTGTTATGGAGTGCCAGAGAGAGGGCTCAGTGTGTAAAGACACTTGCCACCAAGACCTCAAACATGAGTTCAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
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| 3UTR TCA 90 bp | AAGCCAAGTGGAAGAAACTTAATTTTCTCTACACTCCCAATGCCATaGTACCCATATCAAAGGAAAGGAAACATACCTACTGCCAGTGCC | + |
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Preference number: 1 (lower is better) Translates to: KPSGRNLIFSTLPMP*YPYQRKGNIPTASA Trigger: GGCACTGGCAGTAGGTATGTTTCCTTTCCTTTGATATGGGTATCATGGCATTGGGAGTGTAGAGAAAATTAAGTTTCTTCCACTTGGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045054.11 |
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| 3UTR CCA 90 bp | TCTCTTTGGGGTTCCAGTGTTCGGATCAGTATATTCTGTCTGAAATaGACCGCCATGTTTCCCGATCATTATTTCTCTTCATTTACTTTC | + |
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Preference number: 1 (lower is better) Translates to: SLWGSSVRISIFCLK*TAMFPDHYFSSFTF Trigger: GAAAGTAAATGAAGAGAAATAATGATCGGGAAACATGGCGGTCCATTTCAGACAGAATATACTGATCCGAACACTGGAACCCCAAAGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
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| 3UTR CCA 90 bp | TTGAGGTCTTGGTGGCAAGTGTCTTTACACACTGAGCCCTCTCTCTaGCACTCCATAACAGTTATGTACTGTGTATTTAAAAACAAAACA | + |
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Preference number: 1 (lower is better) Translates to: LRSWWQVSLHTEPSL*HSITVMYCVFKNKT Trigger: TGTTTTGTTTTTAAATACACAGTACATAACTGTTATGGAGTGCCAGAGAGAGGGCTCAGTGTGTAAAGACACTTGCCACCAAGACCTCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
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| 3UTR TCA 90 bp | AGGAAATCCATGCTGAGAATCTTTGTTAACTATCAGCTCGTTAAATaGGTCCTGTTTCTCCAGCAAATGTCTGCTATACCTAGAAGCTGT | + |
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Preference number: 1 (lower is better) Translates to: RKSMLRIFVNYQLVK*VLFLQQMSAIPRSC Trigger: ACAGCTTCTAGGTATAGCAGACATTTGCTGGAGAAACAGGACTCATTTAACGAGCTGATAGTTAACAAAGATTCTCAGCATGGATTTCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045054.11 |
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| 3UTR TCA 90 bp | ACTTCCCTTCTCTCAACTAATTCAGCTATAGTTTTGTGCATCAACTaGTCAACATCCCTTTCTATCTCTGATATGAGTGTAACATTAAAC | + |
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Preference number: 1 (lower is better) Translates to: TSLLSTNSAIVLCIN*STSLSISDMSVTLN Trigger: GTTTAATGTTACACTCATATCAGAGATAGAAAGGGATGTTGATCAGTTGATGCACAAAACTATAGCTGAATTAGTTGAGAGAAGGGAAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045054.11 |
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| 3UTR-3UTR CCA 90 bp | CTGCTAGAATTCTCAGGTTTGGTTCAGCCTCTTTCCCTTCCCTGGGCACTTTCAGGACTTCAGTTTCAGTaGGGCCTGCCACCTCGATGG | + |
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Preference number: 2 (lower is better) Translates to: LLEFSGLVQPLSLPWALSGLQFQ*GLPPRW Trigger: CCATCGAGGTGGCAGGCCCCACTGAAACTGAAGTCC...TGAAAGTGCCCAGGGAAGGGAAAGAGGCTGAACCAAACCTGAGAATTCTAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045054.11 |
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| 3UTR-3UTR TCA 90 bp | ATGTCCACCACAAGAAGCAGAGACTTTTATATCTATCCCGAAGCCAAGGAAGCCGGTCAGCAGGGTACCTaGCAACTGAGAAGCAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: MSTTRSRDFYIYPEAKEAGQQGT*QLRSRG Trigger: CCCTCTGCTTCTCAGTTGTCAGGTACCCTGCTGACC...GGCTTCCTTGGCTTCGGGATAGATATAAAAGTCTCTGCTTCTTGTGGTGGACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
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| 3UTR-3UTR GCA 90 bp | AGTGTGTTTGTGAATGGATCACAGACCACTTGTGGAGGTCAGAGGACAACATGCAGCCAAGGGAAGGATTaGCCTCTATGGCTCATCAAG | + |
|
Preference number: 2 (lower is better) Translates to: SVFVNGSQTTCGGQRTTCSQGKD*PLWLIK Trigger: CTTGATGAGCCATAGAGGGCAATCCTTCCCTTGGCT...GCATGTTGTCCTCTGACCTCCACAAGTGGTCTGTGATCCATTCACAAACACACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
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| 3UTR-3UTR CCA 90 bp | TGTTCGGATCAGTATATTCTGTCTGAAATGGACCGCCATGTTTCCCGATCATTAGGACTTCAGTTTCAGTaGGGCCTGCCACCTCGATGG | + |
|
Preference number: 2 (lower is better) Translates to: CSDQYILSEMDRHVSRSLGLQFQ*GLPPRW Trigger: CCATCGAGGTGGCAGGCCCCACTGAAACTGAAGTCC...TAATGATCGGGAAACATGGCGGTCCATTTCAGACAGAATATACTGATCCGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
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| 3UTR-3UTR CCA 90 bp | AGTGTGTTTGTGAATGGATCACAGACCACTTGTGGAGGTCAGAGGACAACATGCGAGGCCATAGAGTCATaGAGAAGGCAAGGTTCTTGC | + |
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Preference number: 2 (lower is better) Translates to: SVFVNGSQTTCGGQRTTCEAIES*RRQGSC Trigger: GCAAGAACCTTGCCTTCTCCATGACTCTATGGCCTC...GCATGTTGTCCTCTGACCTCCACAAGTGGTCTGTGATCCATTCACAAACACACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
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| 3UTR-3UTR CCA 90 bp | CTGCTAGAATTCTCAGGTTTGGTTCAGCCTCTTTCCCTTCCCTGGGCACTTTCAATATTCTGTCTGAAATaGACCGCCATGTTTCCCGAT | + |
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Preference number: 2 (lower is better) Translates to: LLEFSGLVQPLSLPWALSIFCLK*TAMFPD Trigger: ATCGGGAAACATGGCGGTCCATTTCAGACAGAATAT...TGAAAGTGCCCAGGGAAGGGAAAGAGGCTGAACCAAACCTGAGAATTCTAGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045054.11 |
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| 3UTR CAA 90 bp | GAGACTTTTATATCTATCCCGAAGCCAAGGAAGCCAAGGGAAGGATaGCCCTCTATGGCTCATCAAGAAGGCTGGATAGAAACAAATTCC | + |
|
Preference number: 2 (lower is better) Translates to: ETFISIPKPRKPREG*PSMAHQEGWIETNS Trigger: GGAATTTGTTTCTATCCAGCCTTCTTGATGAGCCATAGAGGGCAATCCTTCCCTTGGCTTCCTTGGCTTCGGGATAGATATAAAAGTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
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| 3UTR-3UTR GCA 90 bp | TCAGCACTGCTAGAATTCTCAGGTTTGGTTCAGCCTCTTTCCCTTCCCTGGGCAATGGCCATCTCGTTTTaGTTTTACAATGTTCAGGAT | + |
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Preference number: 2 (lower is better) Translates to: SALLEFSGLVQPLSLPWAMAISF*FYNVQD Trigger: ATCCTGAACATTGTAAAAGCAAAACGAGATGGCCAT...TGCCCAGGGAAGGGAAAGAGGCTGAACCAAACCTGAGAATTCTAGCAGTGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045054.11 |
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| 3UTR-3UTR GCA 90 bp | CTCTGGATTTTATCAAAGTGGGAATTTAAGCTGAAAGAACTAGGTAAAGAGGCCACTCGGGTGTGGCTGTaGACACCTGTAACACAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: LWILSKWEFKLKELGKEATRVWL*TPVTQL Trigger: GAGCTGTGTTACAGGTGTGCACAGCCACACCCGAGT...GGCCTCTTTACCTAGTTCTTTCAGCTTAAATTCCCACTTTGATAAAATCCAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
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| 3UTR-3UTR TCA 90 bp | AGTATCATACAGGATAGGGTAGGGCAGATAGCAGTTCCTTCTTTTAAGTTGATTAGTGTCTTTACACACTaGGCCCTCTCTCTGGCACTC | + |
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Preference number: 2 (lower is better) Translates to: SIIQDRVGQIAVPSFKLISVFTH*ALSLAL Trigger: GAGTGCCAGAGAGAGGGCTCAGTGTGTAAAGACACT...AATCAACTTAAAAGAAGGAACTGCTATCTGCCCTACCCTATCCTGTATGATACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
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| 3UTR-3UTR GCA 90 bp | ACCATTACAAAAGATAATGCTTTAACATACACCACCTCCACCTTTCTCCTGCCTCCAGGCTTTCTGTGCTaGCTTCTGGAAACTCCTAAG | + |
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Preference number: 2 (lower is better) Translates to: TITKDNALTYTTSTFLLPPGFLC*LLETPK Trigger: CTTAGGAGTTTCCAGAAGGCAGCACAGAAAGCCTGG...AGGCAGGAGAAAGGTGGAGGTGGTGTATGTTAAAGCATTATCTTTTGTAATGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045054.11 |
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| 3UTR-3UTR CCA 90 bp | AGTGTGTTTGTGAATGGATCACAGACCACTTGTGGAGGTCAGAGGACAACATGCGCTCATCAAGAAGGCTaGATAGAAACAAATTCCCAA | + |
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Preference number: 2 (lower is better) Translates to: SVFVNGSQTTCGGQRTTCAHQEG*IETNSQ Trigger: TTGGGAATTTGTTTCTATCCAGCCTTCTTGATGAGC...GCATGTTGTCCTCTGACCTCCACAAGTGGTCTGTGATCCATTCACAAACACACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
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| 3UTR-3UTR TCA 90 bp | CTCTGGATTTTATCAAAGTGGGAATTTAAGCTGAAAGAACTAGGTAAAGAGGCCAGAGAAAGGCTGATGTaGACTTCTGAGCTGTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: LWILSKWEFKLKELGKEARERLM*TSELWE Trigger: CTCCCACAGCTCAGAAGTTCACATCAGCCTTTCTCT...GGCCTCTTTACCTAGTTCTTTCAGCTTAAATTCCCACTTTGATAAAATCCAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
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| 3UTR-3UTR CCA 90 bp | ATGTCCACCACAAGAAGCAGAGACTTTTATATCTATCCCGAAGCCAAGGAAGCCGTTCCTAAGAAATTCTaGCTTCATTTTGTGCTGTGT | + |
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Preference number: 2 (lower is better) Translates to: MSTTRSRDFYIYPEAKEAVPKKF*LHFVLC Trigger: ACACAGCACAAAATGAAGCCAGAATTTCTTAGGAAC...GGCTTCCTTGGCTTCGGGATAGATATAAAAGTCTCTGCTTCTTGTGGTGGACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
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| 3UTR-3UTR CCA 90 bp | CTCTGGATTTTATCAAAGTGGGAATTTAAGCTGAAAGAACTAGGTAAAGAGGCCATCACAGACCACTTGTaGAGGTCAGAGGACAACATG | + |
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Preference number: 2 (lower is better) Translates to: LWILSKWEFKLKELGKEAITDHL*RSEDNM Trigger: CATGTTGTCCTCTGACCTCCACAAGTGGTCTGTGAT...GGCCTCTTTACCTAGTTCTTTCAGCTTAAATTCCCACTTTGATAAAATCCAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
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| 3UTR-3UTR CCA 90 bp | TGTTCGGATCAGTATATTCTGTCTGAAATGGACCGCCATGTTTCCCGATCATTATTTCTTTTGTATTCCTaGACTTCAGTTTCAGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: CSDQYILSEMDRHVSRSLFLLYS*TSVSVG Trigger: CCCCACTGAAACTGAAGTCCAGGAATACAAAAGAAA...TAATGATCGGGAAACATGGCGGTCCATTTCAGACAGAATATACTGATCCGAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
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| 3UTR-3UTR CCA 90 bp | TCTTTCACCATTACAAAAGATAATGCTTTAACATACACCACCTCCACCTTTCTCTCCTCAGTGCTACTCTaGCATATTCTTCACAGAGCC | + |
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Preference number: 2 (lower is better) Translates to: SFTITKDNALTYTTSTFLSSVLL*HILHRA Trigger: GGCTCTGTGAAGAATATGCCAGAGTAGCACTGAGGA...GAGAAAGGTGGAGGTGGTGTATGTTAAAGCATTATCTTTTGTAATGGTGAAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045054.11 |
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| 3UTR-3UTR CCA 90 bp | CCTATCCCATTCTATTTTCCTTCATGGCTCAGCCCAAATTTCTTGACATTCTGTGGGCACTTATTTCCATaGAAAGAATATCCTTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: PIPFYFPSWLSPNFLTFCGHLFP*KEYPLE Trigger: CTCCAAAGGATATTCTTTCCATGGAAATAAGTGCCC...ACAGAATGTCAAGAAATTTGGGCTGAGCCATGAAGGAAAATAGAATGGGATAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045054.11 |
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| 3UTR-3UTR TCA 90 bp | TGTCTGAAATGGACCGCCATGTTTCCCGATCATTATTTCTCTTCATTTACTTTCTTTAGTCTCCTTTGCTaGGAGGTCTCAGTTTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: CLKWTAMFPDHYFSSFTFFSLLC*EVSVFF Trigger: AAAGAAAACTGAGACCTCTCAGCAAAGGAGACTAAA...GAAAGTAAATGAAGAGAAATAATGATCGGGAAACATGGCGGTCCATTTCAGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
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| 3UTR-3UTR TCA 90 bp | ACCATTACAAAAGATAATGCTTTAACATACACCACCTCCACCTTTCTCCTGCCTCTTCCTGAAATTTGTTaGGATCTTCTCCAACCAAAT | + |
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Preference number: 2 (lower is better) Translates to: TITKDNALTYTTSTFLLPLPEIC*DLLQPN Trigger: ATTTGGTTGGAGAAGATCTCAACAAATTTCAGGAAG...AGGCAGGAGAAAGGTGGAGGTGGTGTATGTTAAAGCATTATCTTTTGTAATGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045054.11 |
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| 3UTR-3UTR TCA 90 bp | CCATTCTATTTTCCTTCATGGCTCAGCCCAAATTTCTTGACATTCTGTTTAATTCTAAGAGTTACACAGTaGTTGTCTGTTTCCCTTTCC | + |
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Preference number: 2 (lower is better) Translates to: PFYFPSWLSPNFLTFCLILRVTQ*LSVSLS Trigger: GGAAAGGGAAACAGACAATCACTGTGTAACTCTTAG...AATTAAACAGAATGTCAAGAAATTTGGGCTGAGCCATGAAGGAAAATAGAATGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045054.11 |
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| 3UTR-3UTR CCA 90 bp | TCTTTCACCATTACAAAAGATAATGCTTTAACATACACCACCTCCACCTTTCTCTTTCTTTTGTATTCCTaGACTTCAGTTTCAGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: SFTITKDNALTYTTSTFLFLLYS*TSVSVG Trigger: CCCCACTGAAACTGAAGTCCAGGAATACAAAAGAAA...GAGAAAGGTGGAGGTGGTGTATGTTAAAGCATTATCTTTTGTAATGGTGAAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045054.11 |
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| 3UTR-3UTR TCA 90 bp | AATAACAGTTTCACTAGTTTCAGTGGTAGGTTTTCTGTTTTCTATGTACAAGGGCTTCCTGAAATTTGTTaGGATCTTCTCCAACCAAAT | + |
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Preference number: 2 (lower is better) Translates to: NNSFTSFSGRFSVFYVQGLPEIC*DLLQPN Trigger: ATTTGGTTGGAGAAGATCTCAACAAATTTCAGGAAG...CCCTTGTACATAGAAAACAGAAAACCTACCACTGAAACTAGTGAAACTGTTATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
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| 3UTR TCA 72 bp | CCCAGCACTAGGCCAATACAGGGTCAGCAGGGTACCTaGCAACTGAGAAGCAGAGGGGTCGGGCTCATAAGC | + |
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Preference number: 3 (lower is better) Translates to: PSTRPIQGQQGT*QLRSRGVGLIS Trigger: GCTTATGAGCCCGACCCCTCTGCTTCTCAGTTGTCAGGTACCCTGCTGACCCTGTATTGGCCTAGTGCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
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| 3UTR CCA 72 bp | AGGGAAGGATTGCCCTCTATGGCTCATCAAGAAGGCTaGATAGAAACAAATTCCCAAGCTCCCAGCACTAGG | + |
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Preference number: 3 (lower is better) Translates to: REGLPSMAHQEG*IETNSQAPSTR Trigger: CCTAGTGCTGGGAGCTTGGGAATTTGTTTCTATCCAGCCTTCTTGATGAGCCATAGAGGGCAATCCTTCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
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| 3UTR-3UTR CAA 90 bp | AGTGTGTTTGTGAATGGATCACAGACCACTTGTGGAGGTCAGAGGACAACATGCAAGCCAAGGGAAGGATaGCCCTCTATGGCTCATCAA | + |
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Preference number: 3 (lower is better) Translates to: SVFVNGSQTTCGGQRTTCKPREG*PSMAHQ Trigger: TTGATGAGCCATAGAGGGCAATCCTTCCCTTGGCTT...GCATGTTGTCCTCTGACCTCCACAAGTGGTCTGTGATCCATTCACAAACACACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
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| 3UTR TCA 72 bp | ATGTTTGAGGTCTTGGTGGCAAGTGTCTTTACACACTaGGCCCTCTCTCTGGCACTCCATAACAGTTATGTA | + |
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Preference number: 3 (lower is better) Translates to: MFEVLVASVFTH*ALSLALHNSYV Trigger: TACATAACTGTTATGGAGTGCCAGAGAGAGGGCTCAGTGTGTAAAGACACTTGCCACCAAGACCTCAAACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
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| 3UTR-3UTR CAA 90 bp | AGTATCATACAGGATAGGGTAGGGCAGATAGCAGTTCCTTCTTTTAAGTTGATTTGGATCACAGACCACTaGTGGAGGTCAGAGGACAAC | + |
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Preference number: 3 (lower is better) Translates to: SIIQDRVGQIAVPSFKLIWITDH*WRSEDN Trigger: GTTGTCCTCTGACCTCCACAAGTGGTCTGTGATCCA...AATCAACTTAAAAGAAGGAACTGCTATCTGCCCTACCCTATCCTGTATGATACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
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| 3UTR TCA 72 bp | GCAAGAGTTAGGTCTCTTCTTCCACTTTTCCAGTTCTaGGGATTGAACTCATGTTTGAGGTCTTGGTGGCAA | + |
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Preference number: 3 (lower is better) Translates to: ARVRSLLPLFQF*GLNSCLRSWWQ Trigger: TTGCCACCAAGACCTCAAACATGAGTTCAATCCTCAGAACTGGAAAAGTGGAAGAAGAGACCTAACTCTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
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| 3UTR GCA 72 bp | ATGATACCCATATCAAAGGAAAGGAAACATACCTACTaGCAGTGCCCAATCAGTCTCTTCTCATACTCCACG | + |
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Preference number: 3 (lower is better) Translates to: MIPISKERKHTY*QCPISLFSYST Trigger: CGTGGAGTATGAGAAGAGACTGATTGGGCACTGGCAGTAGGTATGTTTCCTTTCCTTTGATATGGGTATCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045054.11 |
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| 3UTR CCA 72 bp | TGGTGGCAAGTGTCTTTACACACTGAGCCCTCTCTCTaGCACTCCATAACAGTTATGTACTGTGTATTTAAA | + |
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Preference number: 3 (lower is better) Translates to: WWQVSLHTEPSL*HSITVMYCVFK Trigger: TTTAAATACACAGTACATAACTGTTATGGAGTGCCAGAGAGAGGGCTCAGTGTGTAAAGACACTTGCCACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
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| 3UTR-3UTR CAA 90 bp | CTCTGGATTTTATCAAAGTGGGAATTTAAGCTGAAAGAACTAGGTAAAGAGGCCGGATTGAACTCATGTTaGAGGTCTTGGTGGCAAGTG | + |
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Preference number: 3 (lower is better) Translates to: LWILSKWEFKLKELGKEAGLNSC*RSWWQV Trigger: CACTTGCCACCAAGACCTCAAACATGAGTTCAATCC...GGCCTCTTTACCTAGTTCTTTCAGCTTAAATTCCCACTTTGATAAAATCCAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
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| 3UTR-3UTR CAA 90 bp | CTCTGGATTTTATCAAAGTGGGAATTTAAGCTGAAAGAACTAGGTAAAGAGGCCTATCACAGAGAGGCATaGTCTCAAGCAGCCAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: LWILSKWEFKLKELGKEAYHREA*SQAARK Trigger: TTTCCTGGCTGCTTGAGACAATGCCTCTCTGTGATA...GGCCTCTTTACCTAGTTCTTTCAGCTTAAATTCCCACTTTGATAAAATCCAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
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| 3UTR TCA 72 bp | ATGCTGAGAATCTTTGTTAACTATCAGCTCGTTAAATaGGTCCTGTTTCTCCAGCAAATGTCTGCTATACCT | + |
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Preference number: 3 (lower is better) Translates to: MLRIFVNYQLVK*VLFLQQMSAIP Trigger: AGGTATAGCAGACATTTGCTGGAGAAACAGGACTCATTTAACGAGCTGATAGTTAACAAAGATTCTCAGCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045054.11 |
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| 3UTR-3UTR CAA 90 bp | CTCTGGATTTTATCAAAGTGGGAATTTAAGCTGAAAGAACTAGGTAAAGAGGCCAATTCTGGCTTCATTTaGTGCTGTGTTTTTAACCCA | + |
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Preference number: 3 (lower is better) Translates to: LWILSKWEFKLKELGKEANSGFI*CCVFNP Trigger: TGGGTTAAAAACACAGCACAAAATGAAGCCAGAATT...GGCCTCTTTACCTAGTTCTTTCAGCTTAAATTCCCACTTTGATAAAATCCAGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
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| 3UTR TCA 72 bp | CTCTCAACTAATTCAGCTATAGTTTTGTGCATCAACTaGTCAACATCCCTTTCTATCTCTGATATGAGTGTA | + |
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Preference number: 3 (lower is better) Translates to: LSTNSAIVLCIN*STSLSISDMSV Trigger: TACACTCATATCAGAGATAGAAAGGGATGTTGATCAGTTGATGCACAAAACTATAGCTGAATTAGTTGAGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045054.11 |
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| 3UTR TCA 72 bp | TTTGTGCATCAACTGATCAACATCCCTTTCTATCTCTaGTATGAGTGTAACATTAAACCTTTCAGTCTTTGT | + |
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Preference number: 3 (lower is better) Translates to: FVHQLINIPFYL*YECNIKPFSLC Trigger: ACAAAGACTGAAAGGTTTAATGTTACACTCATATCAGAGATAGAAAGGGATGTTGATCAGTTGATGCACAAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045054.11 |
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| CDS-3UTR TCA 90 bp | GGTGCCGTCCCTCTGCTGTTCCTCAAGTCTTTCTTATTCTCTCACTGTCCAGGCTTCTGGGATCAGCAGTaGGAGGTCACTTCCAGAGTG | + |
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Preference number: 4 (lower is better) Translates to: GAVPLLFLKSFLFSHCPGFWDQQ*EVTSRV Trigger: CACTCTGGAAGTGACCTCTCACTGCTGATCCCAGAA...GCCTGGACAGTGAGAGAATAAGAAAGACTTGAGGAACAGCAGAGGGACGGCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045054.11 |
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| CDS-3UTR CCA 90 bp | TTTTGTATTCCTGGACTTCAGTTTCAGTGGGGCCTGCCACCTCGATGGGCACTCTTCTCCCCATGGACCTaGATATTCCAGGAGACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FCIPGLQFQWGLPPRWALFSPWT*IFQETP Trigger: AGGCGTCTCCTGGAATATCCAGGTCCATGGGGAGAA...GAGTGCCCATCGAGGTGGCAGGCCCCACTGAAACTGAAGTCCAGGAATACAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
||
| CDS-3UTR TCA 90 bp | TTTTGTATTCCTGGACTTCAGTTTCAGTGGGGCCTGCCACCTCGATGGGCACTCCTGCTTTGTTGTCAGTaGAGTACACACCAGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: FCIPGLQFQWGLPPRWALLLCCQ*STHQPH Trigger: GTGTGGCTGGTGTGTACTTCACTGACAACAAAGCAG...GAGTGCCCATCGAGGTGGCAGGCCCCACTGAAACTGAAGTCCAGGAATACAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
||
| CDS-3UTR CCA 90 bp | TTTTGTATTCCTGGACTTCAGTTTCAGTGGGGCCTGCCACCTCGATGGGCACTCCAACCAAAGGCCTCTTaGAGCTGTAGGTACGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FCIPGLQFQWGLPPRWALQPKAS*SCRYVS Trigger: GGAAACGTACCTACAGCTCCAAGAGGCCTTTGGTTG...GAGTGCCCATCGAGGTGGCAGGCCCCACTGAAACTGAAGTCCAGGAATACAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
||
| CDS-3UTR TCA 90 bp | ATGTCCACCACAAGAAGCAGAGACTTTTATATCTATCCCGAAGCCAAGGAAGCCATGCTTCGCCTCCTATaGGCAAGCCCCCTCCACGTT | + |
|
Preference number: 4 (lower is better) Translates to: MSTTRSRDFYIYPEAKEAMLRLL*ASPLHV Trigger: AACGTGGAGGGGGCTTGCTCATAGGAGGCGAAGCAT...GGCTTCCTTGGCTTCGGGATAGATATAAAAGTCTCTGCTTCTTGTGGTGGACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
||
| CDS-3UTR CCA 90 bp | TTTTGTATTCCTGGACTTCAGTTTCAGTGGGGCCTGCCACCTCGATGGGCACTCCCCCCACATCGCTTGTaGGTTCAAAACAATAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: FCIPGLQFQWGLPPRWALPPHRL*VQNNRH Trigger: GTGTCTATTGTTTTGAACCCACAAGCGATGTGGGGG...GAGTGCCCATCGAGGTGGCAGGCCCCACTGAAACTGAAGTCCAGGAATACAAAA 51% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
||
| CDS-3UTR CCA 90 bp | CCACAAGAAGCAGAGACTTTTATATCTATCCCGAAGCCAAGGAAGCCAAGGGAACATCTGGGCCTAGCTTaGCTAGCCAGCCCTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PQEAETFISIPKPRKPREHLGLA*LASPSP Trigger: TGGAGAAGGGCTGGCTAGCCAAGCTAGGCCCAGATG...TTCCCTTGGCTTCCTTGGCTTCGGGATAGATATAAAAGTCTCTGCTTCTTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
||
| CDS-3UTR TCA 90 bp | AGTGTGTTTGTGAATGGATCACAGACCACTTGTGGAGGTCAGAGGACAACATGCAGCAAGAAGTCCTCATaGGATGCTACCACCATGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SVFVNGSQTTCGGQRTTCSKKSS*DATTMR Trigger: CCGCATGGTGGTAGCATCTCATGAGGACTTCTTGCT...GCATGTTGTCCTCTGACCTCCACAAGTGGTCTGTGATCCATTCACAAACACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
||
| CDS-3UTR TCA 90 bp | AGTGTTCGGATCAGTATATTCTGTCTGAAATGGACCGCCATGTTTCCCGATCATATGCTTCGCCTCCTATaGGCAAGCCCCCTCCACGTT | + |
|
Preference number: 4 (lower is better) Translates to: SVRISIFCLKWTAMFPDHMLRLL*ASPLHV Trigger: AACGTGGAGGGGGCTTGCTCATAGGAGGCGAAGCAT...ATGATCGGGAAACATGGCGGTCCATTTCAGACAGAATATACTGATCCGAACACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
||
| CDS-3UTR GCA 90 bp | TTGGGGTTCCAGTGTTCGGATCAGTATATTCTGTCTGAAATGGACCGCCATGTTATGGGGTACCCTGCGTaGATCCAGCCTACTGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: LGFQCSDQYILSEMDRHVMGYPA*IQPTEI Trigger: GATCTCAGTAGGCTGGATGCACGCAGGGTACCCCAT...AACATGGCGGTCCATTTCAGACAGAATATACTGATCCGAACACTGGAACCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
||
| CDS-3UTR GCA 90 bp | ATGTCCACCACAAGAAGCAGAGACTTTTATATCTATCCCGAAGCCAAGGAAGCCATGGGGTACCCTGCGTaGATCCAGCCTACTGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: MSTTRSRDFYIYPEAKEAMGYPA*IQPTEI Trigger: GATCTCAGTAGGCTGGATGCACGCAGGGTACCCCAT...GGCTTCCTTGGCTTCGGGATAGATATAAAAGTCTCTGCTTCTTGTGGTGGACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
||
| CDS-3UTR CCA 90 bp | TTTTGTATTCCTGGACTTCAGTTTCAGTGGGGCCTGCCACCTCGATGGGCACTCAAGAAGCAGTTCACATaGAACAGAATCCTCGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FCIPGLQFQWGLPPRWALKKQFT*NRILGD Trigger: ATCCCCGAGGATTCTGTTCCATGTGAACTGCTTCTT...GAGTGCCCATCGAGGTGGCAGGCCCCACTGAAACTGAAGTCCAGGAATACAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTGTTTGTGAATGGATCACAGACCACTTGTGGAGGTCAGAGGACAACATGCACACACCAGCCACACTaGTCACCAGATTCCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SVFVNGSQTTCGGQRTTCTHQPH*SPDSQE Trigger: TTCCTGGGAATCTGGTGACCAGTGTGGCTGGTGTGT...GCATGTTGTCCTCTGACCTCCACAAGTGGTCTGTGATCCATTCACAAACACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
||
| CDS-3UTR CCA 90 bp | CCACAAGAAGCAGAGACTTTTATATCTATCCCGAAGCCAAGGAAGCCAAGGGAAGGCCAGTTCTCCCCATaGACCTGGATATTCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PQEAETFISIPKPRKPREGQFSP*TWIFQE Trigger: CTCCTGGAATATCCAGGTCCATGGGGAGAACTGGCC...TTCCCTTGGCTTCCTTGGCTTCGGGATAGATATAAAAGTCTCTGCTTCTTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
||
| CDS-3UTR TCA 90 bp | CCACAAGAAGCAGAGACTTTTATATCTATCCCGAAGCCAAGGAAGCCAAGGGAACCCCCAGGGAGTCATTaGCTTCTGGCTCAATCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PQEAETFISIPKPRKPREPPGSH*LLAQSL Trigger: CAAAGATTGAGCCAGAAGTCAATGACTCCCTGGGGG...TTCCCTTGGCTTCCTTGGCTTCGGGATAGATATAAAAGTCTCTGCTTCTTGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
||
| CDS-3UTR TCA 90 bp | TGGGGTTCCAGTGTTCGGATCAGTATATTCTGTCTGAAATGGACCGCCATGTTTTGGGCACAGTCAGGATaGTGTTGTCAGTGGCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: WGSSVRISIFCLKWTAMFWAQSG*CCQWPV Trigger: AACTGGCCACTGACAACATCATCCTGACTGTGCCCA...AAACATGGCGGTCCATTTCAGACAGAATATACTGATCCGAACACTGGAACCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
||
| CDS-3UTR GCA 90 bp | AGTGTGTTTGTGAATGGATCACAGACCACTTGTGGAGGTCAGAGGACAACATGCTCTGTACCACAATCTTaGCTTTGCGGCCACCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: SVFVNGSQTTCGGQRTTCSVPQS*LCGHHP Trigger: TGGATGGTGGCCGCAAAGGCAAGATTGTGGTACAGA...GCATGTTGTCCTCTGACCTCCACAAGTGGTCTGTGATCCATTCACAAACACACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
||
| CDS-3UTR GCA 90 bp | CTGCTAGAATTCTCAGGTTTGGTTCAGCCTCTTTCCCTTCCCTGGGCACTTTCAAAAACAATAGACACTTaGGTCACTGGTCAGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLEFSGLVQPLSLPWALSKTIDT*VTGQVG Trigger: CCCCACCTGACCAGTGACGCAAGTGTCTATTGTTTT...TGAAAGTGCCCAGGGAAGGGAAAGAGGCTGAACCAAACCTGAGAATTCTAGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045054.11 |
||
| CDS-3UTR TCA 90 bp | AGTGTTCGGATCAGTATATTCTGTCTGAAATGGACCGCCATGTTTCCCGATCATAGCAAGAAGTCCTCATaGGATGCTACCACCATGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SVRISIFCLKWTAMFPDHSKKSS*DATTMR Trigger: CCGCATGGTGGTAGCATCTCATGAGGACTTCTTGCT...ATGATCGGGAAACATGGCGGTCCATTTCAGACAGAATATACTGATCCGAACACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
||
| CDS-3UTR TCA 90 bp | CCTATCCCATTCTATTTTCCTTCATGGCTCAGCCCAAATTTCTTGACATTCTGTATGCTTCGCCTCCTATaGGCAAGCCCCCTCCACGTT | + |
|
Preference number: 4 (lower is better) Translates to: PIPFYFPSWLSPNFLTFCMLRLL*ASPLHV Trigger: AACGTGGAGGGGGCTTGCTCATAGGAGGCGAAGCAT...ACAGAATGTCAAGAAATTTGGGCTGAGCCATGAAGGAAAATAGAATGGGATAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045054.11 |
||
| CDS-3UTR TCA 90 bp | TTGGGGTTCCAGTGTTCGGATCAGTATATTCTGTCTGAAATGGACCGCCATGTTCTGCTTTGTTGTCAGTaGAGTACACACCAGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: LGFQCSDQYILSEMDRHVLLCCQ*STHQPH Trigger: GTGTGGCTGGTGTGTACTTCACTGACAACAAAGCAG...AACATGGCGGTCCATTTCAGACAGAATATACTGATCCGAACACTGGAACCCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
||
| CDS-3UTR TCA 90 bp | ATGTCCACCACAAGAAGCAGAGACTTTTATATCTATCCCGAAGCCAAGGAAGCCCTCATCTCTGTCATCTaGGAGGTCGTCATCACAACG | + |
|
Preference number: 4 (lower is better) Translates to: MSTTRSRDFYIYPEAKEALISVI*EVVITT Trigger: CGTTGTGATGACGACCTCTCAGATGACAGAGATGAG...GGCTTCCTTGGCTTCGGGATAGATATAAAAGTCTCTGCTTCTTGTGGTGGACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
||
| CDS-3UTR TCA 90 bp | AGTGTTCGGATCAGTATATTCTGTCTGAAATGGACCGCCATGTTTCCCGATCATTGGGCACAGTCAGGATaGTGTTGTCAGTGGCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SVRISIFCLKWTAMFPDHWAQSG*CCQWPV Trigger: AACTGGCCACTGACAACATCATCCTGACTGTGCCCA...ATGATCGGGAAACATGGCGGTCCATTTCAGACAGAATATACTGATCCGAACACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
||
| CDS-3UTR GCA 90 bp | AGTGTGTTTGTGAATGGATCACAGACCACTTGTGGAGGTCAGAGGACAACATGCAAAACAATAGACACTTaGGTCACTGGTCAGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SVFVNGSQTTCGGQRTTCKTIDT*VTGQVG Trigger: CCCCACCTGACCAGTGACGCAAGTGTCTATTGTTTT...GCATGTTGTCCTCTGACCTCCACAAGTGGTCTGTGATCCATTCACAAACACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
||
| CDS-3UTR CCA 90 bp | TCAGCACTGCTAGAATTCTCAGGTTTGGTTCAGCCTCTTTCCCTTCCCTGGGCACCACGTTTCACAAACTaGACTAGCTTATCTGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: SALLEFSGLVQPLSLPWAPRFTN*TSLSVM Trigger: CATGACAGATAAGCTAGTCCAGTTTGTGAAACGTGG...TGCCCAGGGAAGGGAAAGAGGCTGAACCAAACCTGAGAATTCTAGCAGTGCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045054.11 |
||
| CDS-3UTR CCA 90 bp | AGTGTTCGGATCAGTATATTCTGTCTGAAATGGACCGCCATGTTTCCCGATCATACACACCAGCCACACTaGTCACCAGATTCCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SVRISIFCLKWTAMFPDHTHQPH*SPDSQE Trigger: TTCCTGGGAATCTGGTGACCAGTGTGGCTGGTGTGT...ATGATCGGGAAACATGGCGGTCCATTTCAGACAGAATATACTGATCCGAACACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
||
| CDS-3UTR CCA 90 bp | CCTATCCCATTCTATTTTCCTTCATGGCTCAGCCCAAATTTCTTGACATTCTGTCATCTGGGCCTAGCTTaGCTAGCCAGCCCTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PIPFYFPSWLSPNFLTFCHLGLA*LASPSP Trigger: TGGAGAAGGGCTGGCTAGCCAAGCTAGGCCCAGATG...ACAGAATGTCAAGAAATTTGGGCTGAGCCATGAAGGAAAATAGAATGGGATAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045054.11 |
||
| CDS-3UTR CCA 90 bp | AGTGTTCGGATCAGTATATTCTGTCTGAAATGGACCGCCATGTTTCCCGATCATTTCTCCCCATGGACCTaGATATTCCAGGAGACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SVRISIFCLKWTAMFPDHFSPWT*IFQETP Trigger: AGGCGTCTCCTGGAATATCCAGGTCCATGGGGAGAA...ATGATCGGGAAACATGGCGGTCCATTTCAGACAGAATATACTGATCCGAACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
||
| CDS-3UTR TCA 90 bp | TGTTCGGATCAGTATATTCTGTCTGAAATGGACCGCCATGTTTCCCGATCATTACCCCCAGGGAGTCATTaGCTTCTGGCTCAATCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: CSDQYILSEMDRHVSRSLPPGSH*LLAQSL Trigger: CAAAGATTGAGCCAGAAGTCAATGACTCCCTGGGGG...TAATGATCGGGAAACATGGCGGTCCATTTCAGACAGAATATACTGATCCGAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
||
| CDS-3UTR TCA 90 bp | AGTGTTCGGATCAGTATATTCTGTCTGAAATGGACCGCCATGTTTCCCGATCATCTCATCTCTGTCATCTaGGAGGTCGTCATCACAACG | + |
|
Preference number: 4 (lower is better) Translates to: SVRISIFCLKWTAMFPDHLISVI*EVVITT Trigger: CGTTGTGATGACGACCTCTCAGATGACAGAGATGAG...ATGATCGGGAAACATGGCGGTCCATTTCAGACAGAATATACTGATCCGAACACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
||
| CDS-3UTR TCA 90 bp | TGTTCGGATCAGTATATTCTGTCTGAAATGGACCGCCATGTTTCCCGATCATTATTCTGGGATCAGCAGTaGGAGGTCACTTCCAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: CSDQYILSEMDRHVSRSLFWDQQ*EVTSRV Trigger: CACTCTGGAAGTGACCTCTCACTGCTGATCCCAGAA...TAATGATCGGGAAACATGGCGGTCCATTTCAGACAGAATATACTGATCCGAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTGTTTGTGAATGGATCACAGACCACTTGTGGAGGTCAGAGGACAACATGCAAGAAGCAGTTCACATaGAACAGAATCCTCGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SVFVNGSQTTCGGQRTTCKKQFT*NRILGD Trigger: ATCCCCGAGGATTCTGTTCCATGTGAACTGCTTCTT...GCATGTTGTCCTCTGACCTCCACAAGTGGTCTGTGATCCATTCACAAACACACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
||
| CDS-3UTR CCA 90 bp | CCACAAGAAGCAGAGACTTTTATATCTATCCCGAAGCCAAGGAAGCCAAGGGAACCCCCACATCGCTTGTaGGTTCAAAACAATAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: PQEAETFISIPKPRKPREPPHRL*VQNNRH Trigger: GTGTCTATTGTTTTGAACCCACAAGCGATGTGGGGG...TTCCCTTGGCTTCCTTGGCTTCGGGATAGATATAAAAGTCTCTGCTTCTTGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
||
| CDS-3UTR CCA 90 bp | TTGGGGTTCCAGTGTTCGGATCAGTATATTCTGTCTGAAATGGACCGCCATGTTGAGCTCGATGTTGTCTaGTTTCTGTACTCGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LGFQCSDQYILSEMDRHVELDVV*FLYSVK Trigger: CTTCACCGAGTACAGAAACCAGACAACATCGAGCTC...AACATGGCGGTCCATTTCAGACAGAATATACTGATCCGAACACTGGAACCCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
||
| CDS-3UTR CCA 90 bp | CCACAAGAAGCAGAGACTTTTATATCTATCCCGAAGCCAAGGAAGCCAAGGGAAGAGCTCGATGTTGTCTaGTTTCTGTACTCGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PQEAETFISIPKPRKPREELDVV*FLYSVK Trigger: CTTCACCGAGTACAGAAACCAGACAACATCGAGCTC...TTCCCTTGGCTTCCTTGGCTTCGGGATAGATATAAAAGTCTCTGCTTCTTGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
||
| CDS-3UTR GCA 90 bp | ATGTCCACCACAAGAAGCAGAGACTTTTATATCTATCCCGAAGCCAAGGAAGCCGGTGCTAAAGATGAGTaGACACCAATGGCTGAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: MSTTRSRDFYIYPEAKEAGAKDE*TPMAEL Trigger: TAACTCAGCCATTGGTGTGCACTCATCTTTAGCACC...GGCTTCCTTGGCTTCGGGATAGATATAAAAGTCTCTGCTTCTTGTGGTGGACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
||
| CDS-3UTR CCA 90 bp | CCTATCCCATTCTATTTTCCTTCATGGCTCAGCCCAAATTTCTTGACATTCTGTACACACCAGCCACACTaGTCACCAGATTCCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PIPFYFPSWLSPNFLTFCTHQPH*SPDSQE Trigger: TTCCTGGGAATCTGGTGACCAGTGTGGCTGGTGTGT...ACAGAATGTCAAGAAATTTGGGCTGAGCCATGAAGGAAAATAGAATGGGATAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045054.11 |
||
| CDS-3UTR CCA 90 bp | TTGGGGTTCCAGTGTTCGGATCAGTATATTCTGTCTGAAATGGACCGCCATGTTTCTTCCATTCTTCCTTaGATGTCTCCCCTAGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LGFQCSDQYILSEMDRHVSSILP*MSPLAC Trigger: ACAAGCTAGGGGAGACATCCAAGGAAGAATGGAAGA...AACATGGCGGTCCATTTCAGACAGAATATACTGATCCGAACACTGGAACCCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
||
| CDS-3UTR CCA 90 bp | ATGTCCACCACAAGAAGCAGAGACTTTTATATCTATCCCGAAGCCAAGGAAGCCTCTTCCATTCTTCCTTaGATGTCTCCCCTAGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: MSTTRSRDFYIYPEAKEASSILP*MSPLAC Trigger: ACAAGCTAGGGGAGACATCCAAGGAAGAATGGAAGA...GGCTTCCTTGGCTTCGGGATAGATATAAAAGTCTCTGCTTCTTGTGGTGGACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
||
| CDS-3UTR TCA 90 bp | AGTATCATACAGGATAGGGTAGGGCAGATAGCAGTTCCTTCTTTTAAGTTGATTTTCTGGGATCAGCAGTaGGAGGTCACTTCCAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SIIQDRVGQIAVPSFKLIFWDQQ*EVTSRV Trigger: CACTCTGGAAGTGACCTCTCACTGCTGATCCCAGAA...AATCAACTTAAAAGAAGGAACTGCTATCTGCCCTACCCTATCCTGTATGATACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
||
| CDS-3UTR TCA 90 bp | AGTATCATACAGGATAGGGTAGGGCAGATAGCAGTTCCTTCTTTTAAGTTGATTTGGGCACAGTCAGGATaGTGTTGTCAGTGGCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SIIQDRVGQIAVPSFKLIWAQSG*CCQWPV Trigger: AACTGGCCACTGACAACATCATCCTGACTGTGCCCA...AATCAACTTAAAAGAAGGAACTGCTATCTGCCCTACCCTATCCTGTATGATACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
||
| CDS-3UTR CCA 90 bp | CCACAAGAAGCAGAGACTTTTATATCTATCCCGAAGCCAAGGAAGCCAAGGGAACCACGTTTCACAAACTaGACTAGCTTATCTGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: PQEAETFISIPKPRKPREPRFTN*TSLSVM Trigger: CATGACAGATAAGCTAGTCCAGTTTGTGAAACGTGG...TTCCCTTGGCTTCCTTGGCTTCGGGATAGATATAAAAGTCTCTGCTTCTTGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
||
| CDS-3UTR CCA 90 bp | TGGGGTTCCAGTGTTCGGATCAGTATATTCTGTCTGAAATGGACCGCCATGTTTCCACGTTTCACAAACTaGACTAGCTTATCTGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: WGSSVRISIFCLKWTAMFPRFTN*TSLSVM Trigger: CATGACAGATAAGCTAGTCCAGTTTGTGAAACGTGG...AAACATGGCGGTCCATTTCAGACAGAATATACTGATCCGAACACTGGAACCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
||
| CDS-3UTR CCA 90 bp | TGTTCGGATCAGTATATTCTGTCTGAAATGGACCGCCATGTTTCCCGATCATTACCCCCACATCGCTTGTaGGTTCAAAACAATAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: CSDQYILSEMDRHVSRSLPPHRL*VQNNRH Trigger: GTGTCTATTGTTTTGAACCCACAAGCGATGTGGGGG...TAATGATCGGGAAACATGGCGGTCCATTTCAGACAGAATATACTGATCCGAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
||
| CDS-3UTR CCA 90 bp | AATAACAGTTTCACTAGTTTCAGTGGTAGGTTTTCTGTTTTCTATGTACAAGGGCATCTGGGCCTAGCTTaGCTAGCCAGCCCTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NNSFTSFSGRFSVFYVQGHLGLA*LASPSP Trigger: TGGAGAAGGGCTGGCTAGCCAAGCTAGGCCCAGATG...CCCTTGTACATAGAAAACAGAAAACCTACCACTGAAACTAGTGAAACTGTTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
||
| CDS-3UTR CCA 90 bp | CTCTGGATTTTATCAAAGTGGGAATTTAAGCTGAAAGAACTAGGTAAAGAGGCCTTCTCCCCATGGACCTaGATATTCCAGGAGACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LWILSKWEFKLKELGKEAFSPWT*IFQETP Trigger: AGGCGTCTCCTGGAATATCCAGGTCCATGGGGAGAA...GGCCTCTTTACCTAGTTCTTTCAGCTTAAATTCCCACTTTGATAAAATCCAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
||
| CDS-3UTR TCA 90 bp | CCTATCCCATTCTATTTTCCTTCATGGCTCAGCCCAAATTTCTTGACATTCTGTGCCACCCAACAGCATTaGCAAGAAAGACAAAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PIPFYFPSWLSPNFLTFCATQQH*QERQRA Trigger: AGCTCTTTGTCTTTCTTGTCAATGCTGTTGGGTGGC...ACAGAATGTCAAGAAATTTGGGCTGAGCCATGAAGGAAAATAGAATGGGATAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045054.11 |
||
| CDS-3UTR TCA 90 bp | AGTATCATACAGGATAGGGTAGGGCAGATAGCAGTTCCTTCTTTTAAGTTGATTCTGCTTTGTTGTCAGTaGAGTACACACCAGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: SIIQDRVGQIAVPSFKLILLCCQ*STHQPH Trigger: GTGTGGCTGGTGTGTACTTCACTGACAACAAAGCAG...AATCAACTTAAAAGAAGGAACTGCTATCTGCCCTACCCTATCCTGTATGATACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
||
| CDS-3UTR TCA 90 bp | TGTCTGAAATGGACCGCCATGTTTCCCGATCATTATTTCTCTTCATTTACTTTCCTCATCTCTGTCATCTaGGAGGTCGTCATCACAACG | + |
|
Preference number: 4 (lower is better) Translates to: CLKWTAMFPDHYFSSFTFLISVI*EVVITT Trigger: CGTTGTGATGACGACCTCTCAGATGACAGAGATGAG...GAAAGTAAATGAAGAGAAATAATGATCGGGAAACATGGCGGTCCATTTCAGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
||
| CDS-3UTR GCA 90 bp | TGTTCGGATCAGTATATTCTGTCTGAAATGGACCGCCATGTTTCCCGATCATTAGGTGCTAAAGATGAGTaGACACCAATGGCTGAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: CSDQYILSEMDRHVSRSLGAKDE*TPMAEL Trigger: TAACTCAGCCATTGGTGTGCACTCATCTTTAGCACC...TAATGATCGGGAAACATGGCGGTCCATTTCAGACAGAATATACTGATCCGAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
||
| CDS-3UTR GCA 90 bp | ATCTTCTCCAACCAAATGCTTTTAGTCTCCTTTGCTGAGAGGTCTCAGTTTTCTAAAACAATAGACACTTaGGTCACTGGTCAGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: IFSNQMLLVSFAERSQFSKTIDT*VTGQVG Trigger: CCCCACCTGACCAGTGACGCAAGTGTCTATTGTTTT...AGAAAACTGAGACCTCTCAGCAAAGGAGACTAAAAGCATTTGGTTGGAGAAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
||
| CDS-3UTR CCA 90 bp | AATAACAGTTTCACTAGTTTCAGTGGTAGGTTTTCTGTTTTCTATGTACAAGGGGGCCAGTTCTCCCCATaGACCTGGATATTCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NNSFTSFSGRFSVFYVQGGQFSP*TWIFQE Trigger: CTCCTGGAATATCCAGGTCCATGGGGAGAACTGGCC...CCCTTGTACATAGAAAACAGAAAACCTACCACTGAAACTAGTGAAACTGTTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
||
| CDS-3UTR CCA 90 bp | AGTATCATACAGGATAGGGTAGGGCAGATAGCAGTTCCTTCTTTTAAGTTGATTCAACCAAAGGCCTCTTaGAGCTGTAGGTACGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SIIQDRVGQIAVPSFKLIQPKAS*SCRYVS Trigger: GGAAACGTACCTACAGCTCCAAGAGGCCTTTGGTTG...AATCAACTTAAAAGAAGGAACTGCTATCTGCCCTACCCTATCCTGTATGATACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
||
| CDS-3UTR CCA 90 bp | ATCTTCTCCAACCAAATGCTTTTAGTCTCCTTTGCTGAGAGGTCTCAGTTTTCTGAGCTCGATGTTGTCTaGTTTCTGTACTCGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IFSNQMLLVSFAERSQFSELDVV*FLYSVK Trigger: CTTCACCGAGTACAGAAACCAGACAACATCGAGCTC...AGAAAACTGAGACCTCTCAGCAAAGGAGACTAAAAGCATTTGGTTGGAGAAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
||
| CDS-3UTR TCA 90 bp | CCATTCTATTTTCCTTCATGGCTCAGCCCAAATTTCTTGACATTCTGTTTAATTAGCAAGAAGTCCTCATaGGATGCTACCACCATGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PFYFPSWLSPNFLTFCLISKKSS*DATTMR Trigger: CCGCATGGTGGTAGCATCTCATGAGGACTTCTTGCT...AATTAAACAGAATGTCAAGAAATTTGGGCTGAGCCATGAAGGAAAATAGAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045054.11 |
||
| CDS-3UTR TCA 90 bp | CTCTGGATTTTATCAAAGTGGGAATTTAAGCTGAAAGAACTAGGTAAAGAGGCCGCCACCCAACAGCATTaGCAAGAAAGACAAAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LWILSKWEFKLKELGKEAATQQH*QERQRA Trigger: AGCTCTTTGTCTTTCTTGTCAATGCTGTTGGGTGGC...GGCCTCTTTACCTAGTTCTTTCAGCTTAAATTCCCACTTTGATAAAATCCAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
||
| CDS-3UTR TCA 90 bp | AATAACAGTTTCACTAGTTTCAGTGGTAGGTTTTCTGTTTTCTATGTACAAGGGCCCCCAGGGAGTCATTaGCTTCTGGCTCAATCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NNSFTSFSGRFSVFYVQGPPGSH*LLAQSL Trigger: CAAAGATTGAGCCAGAAGTCAATGACTCCCTGGGGG...CCCTTGTACATAGAAAACAGAAAACCTACCACTGAAACTAGTGAAACTGTTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
||
| CDS-3UTR GCA 90 bp | ACCATTACAAAAGATAATGCTTTAACATACACCACCTCCACCTTTCTCCTGCCTGGTGCTAAAGATGAGTaGACACCAATGGCTGAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: TITKDNALTYTTSTFLLPGAKDE*TPMAEL Trigger: TAACTCAGCCATTGGTGTGCACTCATCTTTAGCACC...AGGCAGGAGAAAGGTGGAGGTGGTGTATGTTAAAGCATTATCTTTTGTAATGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045054.11 |
||
| CDS-3UTR CCA 90 bp | TGGGGTTCCAGTGTTCGGATCAGTATATTCTGTCTGAAATGGACCGCCATGTTTCTAGCTTATCTGTCATaGTTTCATTGTAGGCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: WGSSVRISIFCLKWTAMFLAYLS*FHCRHQ Trigger: TTGATGCCTACAATGAAACCATGACAGATAAGCTAG...AAACATGGCGGTCCATTTCAGACAGAATATACTGATCCGAACACTGGAACCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
||
| CDS-3UTR CCA 90 bp | ATGTCCACCACAAGAAGCAGAGACTTTTATATCTATCCCGAAGCCAAGGAAGCCCTAGCTTATCTGTCATaGTTTCATTGTAGGCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: MSTTRSRDFYIYPEAKEALAYLS*FHCRHQ Trigger: TTGATGCCTACAATGAAACCATGACAGATAAGCTAG...GGCTTCCTTGGCTTCGGGATAGATATAAAAGTCTCTGCTTCTTGTGGTGGACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
||
| CDS-3UTR CCA 90 bp | ATCTTCTCCAACCAAATGCTTTTAGTCTCCTTTGCTGAGAGGTCTCAGTTTTCTTCTTCCATTCTTCCTTaGATGTCTCCCCTAGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: IFSNQMLLVSFAERSQFSSSILP*MSPLAC Trigger: ACAAGCTAGGGGAGACATCCAAGGAAGAATGGAAGA...AGAAAACTGAGACCTCTCAGCAAAGGAGACTAAAAGCATTTGGTTGGAGAAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
||
| CDS-3UTR TCA 90 bp | TGTCTGAAATGGACCGCCATGTTTCCCGATCATTATTTCTCTTCATTTACTTTCTTCTGGCTCAATCTTTaGCTCTATTCCACAGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CLKWTAMFPDHYFSSFTFFWLNL*LYSTAL Trigger: GAGAGCTGTGGAATAGAGTCAAAGATTGAGCCAGAA...GAAAGTAAATGAAGAGAAATAATGATCGGGAAACATGGCGGTCCATTTCAGACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
||
| CDS-3UTR TCA 90 bp | CTCTGGATTTTATCAAAGTGGGAATTTAAGCTGAAAGAACTAGGTAAAGAGGCCTTCTGGCTCAATCTTTaGCTCTATTCCACAGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LWILSKWEFKLKELGKEAFWLNL*LYSTAL Trigger: GAGAGCTGTGGAATAGAGTCAAAGATTGAGCCAGAA...GGCCTCTTTACCTAGTTCTTTCAGCTTAAATTCCCACTTTGATAAAATCCAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
||
| CDS-3UTR TCA 90 bp | AGTGTTCGGATCAGTATATTCTGTCTGAAATGGACCGCCATGTTTCCCGATCATGTAAATAAAACCTTATaGCCAGTTACAACTACCCGA | + |
|
Preference number: 4 (lower is better) Translates to: SVRISIFCLKWTAMFPDHVNKTL*PVTTTR Trigger: TCGGGTAGTTGTAACTGGTCATAAGGTTTTATTTAC...ATGATCGGGAAACATGGCGGTCCATTTCAGACAGAATATACTGATCCGAACACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
||
| CDS-3UTR GCA 90 bp | AATAACAGTTTCACTAGTTTCAGTGGTAGGTTTTCTGTTTTCTATGTACAAGGGTCTGTACCACAATCTTaGCTTTGCGGCCACCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: NNSFTSFSGRFSVFYVQGSVPQS*LCGHHP Trigger: TGGATGGTGGCCGCAAAGGCAAGATTGTGGTACAGA...CCCTTGTACATAGAAAACAGAAAACCTACCACTGAAACTAGTGAAACTGTTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
||
| CDS-3UTR CCA 90 bp | AATAACAGTTTCACTAGTTTCAGTGGTAGGTTTTCTGTTTTCTATGTACAAGGGCAACCAAAGGCCTCTTaGAGCTGTAGGTACGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NNSFTSFSGRFSVFYVQGQPKAS*SCRYVS Trigger: GGAAACGTACCTACAGCTCCAAGAGGCCTTTGGTTG...CCCTTGTACATAGAAAACAGAAAACCTACCACTGAAACTAGTGAAACTGTTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
||
| CDS-3UTR CCA 90 bp | AATAACAGTTTCACTAGTTTCAGTGGTAGGTTTTCTGTTTTCTATGTACAAGGGAAGAAGCAGTTCACATaGAACAGAATCCTCGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: NNSFTSFSGRFSVFYVQGKKQFT*NRILGD Trigger: ATCCCCGAGGATTCTGTTCCATGTGAACTGCTTCTT...CCCTTGTACATAGAAAACAGAAAACCTACCACTGAAACTAGTGAAACTGTTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
||
| CDS-3UTR TCA 90 bp | AGTATCATACAGGATAGGGTAGGGCAGATAGCAGTTCCTTCTTTTAAGTTGATTGTAAATAAAACCTTATaGCCAGTTACAACTACCCGA | + |
|
Preference number: 4 (lower is better) Translates to: SIIQDRVGQIAVPSFKLIVNKTL*PVTTTR Trigger: TCGGGTAGTTGTAACTGGTCATAAGGTTTTATTTAC...AATCAACTTAAAAGAAGGAACTGCTATCTGCCCTACCCTATCCTGTATGATACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
||
| CDS-3UTR TCA 90 bp | TGTCTGAAATGGACCGCCATGTTTCCCGATCATTATTTCTCTTCATTTACTTTCGTAAATAAAACCTTATaGCCAGTTACAACTACCCGA | + |
|
Preference number: 4 (lower is better) Translates to: CLKWTAMFPDHYFSSFTFVNKTL*PVTTTR Trigger: TCGGGTAGTTGTAACTGGTCATAAGGTTTTATTTAC...GAAAGTAAATGAAGAGAAATAATGATCGGGAAACATGGCGGTCCATTTCAGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
||
| 3UTR CAA 72 bp | AACCTTTCAGTCTTTGTTGATAGGCTGATCAAACCATaGAAGATCTATAAGTGGCATCTATACATTATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NLSVFVDRLIKP*KIYKWHLYIIW Trigger: CCAAATAATGTATAGATGCCACTTATAGATCTTCAATGGTTTGATCAGCCTATCAACAAAGACTGAAAGGTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045054.11 |
||
| CDS GCA 90 bp | AGAGCTGGCTTTCCAGCAAGAAGTCCTCATGAGATGCTACCACCATaGGGCCTCTGCCATAGGAAGAGGCGGCAACGAGGACCTGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RAGFPARSPHEMLPP*GLCHRKRRQRGPGP Trigger: TGGGCCAGGTCCTCGTTGCCGCCTCTTCCTATGGCAGAGGCCGCATGGTGGTAGCATCTCATGAGGACTTCTTGCTGGAAAGCCAGCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045054.11 ENSMUST00000045140.5 ENSMUST00000121083.8 |
||
| CDS GCA 90 bp | TTTCCAGCAAGAAGTCCTCATGAGATGCTACCACCATGCGGCCTCTaGCATAGGAAGAGGCGGCAACGAGGACCTGGCCCACGTCATTCA | + |
|
Preference number: 5 (lower is better) Translates to: FPARSPHEMLPPCGL*HRKRRQRGPGPRHS Trigger: TGAATGACGTGGGCCAGGTCCTCGTTGCCGCCTCTTCCTATGGCAGAGGCCGCATGGTGGTAGCATCTCATGAGGACTTCTTGCTGGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045054.11 ENSMUST00000045140.5 ENSMUST00000121083.8 |
||
| CDS-3UTR CAA 90 bp | TCAGCACTGCTAGAATTCTCAGGTTTGGTTCAGCCTCTTTCCCTTCCCTGGGCAGTCTGTACCACAATCTaGCCTTTGCGGCCACCATCC | + |
|
Preference number: 5 (lower is better) Translates to: SALLEFSGLVQPLSLPWAVCTTI*PLRPPS Trigger: GGATGGTGGCCGCAAAGGCAAGATTGTGGTACAGAC...TGCCCAGGGAAGGGAAAGAGGCTGAACCAAACCTGAGAATTCTAGCAGTGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045054.11 |
||
| CDS CCA 90 bp | ACCAGATTCCCAGGAAATGCGAACAGAACTCTATCATCATCACCCTaGGTATCCCAATCCCATGCTTCGCCTCCTATGAGCAAGCCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: TRFPGNANRTLSSSP*VSQSHASPPMSKPP Trigger: AGGGGGCTTGCTCATAGGAGGCGAAGCATGGGATTGGGATACCCAGGGTGATGATGATAGAGTTCTGTTCGCATTTCCTGGGAATCTGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045054.11 ENSMUST00000045140.5 ENSMUST00000121083.8 |
||
| CDS-3UTR CAA 90 bp | TTTTGTATTCCTGGACTTCAGTTTCAGTGGGGCCTGCCACCTCGATGGGCACTCCTTGTGTCTGCTTTGTaGTCAGTGAAGTACACACCA | + |
|
Preference number: 5 (lower is better) Translates to: FCIPGLQFQWGLPPRWALLVSAL*SVKYTP Trigger: TGGTGTGTACTTCACTGACAACAAAGCAGACACAAG...GAGTGCCCATCGAGGTGGCAGGCCCCACTGAAACTGAAGTCCAGGAATACAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
||
| CDS GCA 90 bp | ATTCCACAGCTCTCGAGAATTTTCACCAATGGTGCTAAAGATGAGTaGACACCAATGGCTGAGTTAGGGGAGGAACGAAGCCACCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: IPQLSRIFTNGAKDE*TPMAELGEERSHPT Trigger: TGTTGGGTGGCTTCGTTCCTCCCCTAACTCAGCCATTGGTGTGCACTCATCTTTAGCACCATTGGTGAAAATTCTCGAGAGCTGTGGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045054.11 ENSMUST00000045140.5 ENSMUST00000121083.8 |
||
| CDS-3UTR CAA 90 bp | TCAGCACTGCTAGAATTCTCAGGTTTGGTTCAGCCTCTTTCCCTTCCCTGGGCACTTGTGTCTGCTTTGTaGTCAGTGAAGTACACACCA | + |
|
Preference number: 5 (lower is better) Translates to: SALLEFSGLVQPLSLPWALVSAL*SVKYTP Trigger: TGGTGTGTACTTCACTGACAACAAAGCAGACACAAG...TGCCCAGGGAAGGGAAAGAGGCTGAACCAAACCTGAGAATTCTAGCAGTGCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045054.11 |
||
| CDS-3UTR CAA 90 bp | TGGGGTTCCAGTGTTCGGATCAGTATATTCTGTCTGAAATGGACCGCCATGTTTACCCCCAGGGAGTCATaGACTTCTGGCTCAATCTTT | + |
|
Preference number: 5 (lower is better) Translates to: WGSSVRISIFCLKWTAMFTPRES*TSGSIF Trigger: AAAGATTGAGCCAGAAGTCAATGACTCCCTGGGGGT...AAACATGGCGGTCCATTTCAGACAGAATATACTGATCCGAACACTGGAACCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
||
| CDS-3UTR CAA 90 bp | TCAGCACTGCTAGAATTCTCAGGTTTGGTTCAGCCTCTTTCCCTTCCCTGGGCAAGTATGACAGCCAATTaGTATCTTCAGGTCAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SALLEFSGLVQPLSLPWASMTAN*YLQVSR Trigger: TCTGCTGACCTGAAGATACAAATTGGCTGTCATACT...TGCCCAGGGAAGGGAAAGAGGCTGAACCAAACCTGAGAATTCTAGCAGTGCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045054.11 |
||
| CDS-3UTR CAA 90 bp | TTGGGGTTCCAGTGTTCGGATCAGTATATTCTGTCTGAAATGGACCGCCATGTTAGCCACCCAACAGCATaGACAAGAAAGACAAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LGFQCSDQYILSEMDRHVSHPTA*TRKTKS Trigger: GCTCTTTGTCTTTCTTGTCAATGCTGTTGGGTGGCT...AACATGGCGGTCCATTTCAGACAGAATATACTGATCCGAACACTGGAACCCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
||
| CDS-3UTR CAA 90 bp | ATGTCCACCACAAGAAGCAGAGACTTTTATATCTATCCCGAAGCCAAGGAAGCCCTTGTGTCTGCTTTGTaGTCAGTGAAGTACACACCA | + |
|
Preference number: 5 (lower is better) Translates to: MSTTRSRDFYIYPEAKEALVSAL*SVKYTP Trigger: TGGTGTGTACTTCACTGACAACAAAGCAGACACAAG...GGCTTCCTTGGCTTCGGGATAGATATAAAAGTCTCTGCTTCTTGTGGTGGACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
||
| CDS-3UTR CAA 90 bp | CTCTGGATTTTATCAAAGTGGGAATTTAAGCTGAAAGAACTAGGTAAAGAGGCCGTCTGTACCACAATCTaGCCTTTGCGGCCACCATCC | + |
|
Preference number: 5 (lower is better) Translates to: LWILSKWEFKLKELGKEAVCTTI*PLRPPS Trigger: GGATGGTGGCCGCAAAGGCAAGATTGTGGTACAGAC...GGCCTCTTTACCTAGTTCTTTCAGCTTAAATTCCCACTTTGATAAAATCCAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
||
| CDS-3UTR CAA 90 bp | AGTGTGTTTGTGAATGGATCACAGACCACTTGTGGAGGTCAGAGGACAACATGCAGTATGACAGCCAATTaGTATCTTCAGGTCAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SVFVNGSQTTCGGQRTTCSMTAN*YLQVSR Trigger: TCTGCTGACCTGAAGATACAAATTGGCTGTCATACT...GCATGTTGTCCTCTGACCTCCACAAGTGGTCTGTGATCCATTCACAAACACACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
||
| CDS-3UTR CAA 90 bp | AGTATCATACAGGATAGGGTAGGGCAGATAGCAGTTCCTTCTTTTAAGTTGATTACCCCCAGGGAGTCATaGACTTCTGGCTCAATCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SIIQDRVGQIAVPSFKLITPRES*TSGSIF Trigger: AAAGATTGAGCCAGAAGTCAATGACTCCCTGGGGGT...AATCAACTTAAAAGAAGGAACTGCTATCTGCCCTACCCTATCCTGTATGATACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
||
| CDS-3UTR CAA 90 bp | AATAACAGTTTCACTAGTTTCAGTGGTAGGTTTTCTGTTTTCTATGTACAAGGGGTCTGTACCACAATCTaGCCTTTGCGGCCACCATCC | + |
|
Preference number: 5 (lower is better) Translates to: NNSFTSFSGRFSVFYVQGVCTTI*PLRPPS Trigger: GGATGGTGGCCGCAAAGGCAAGATTGTGGTACAGAC...CCCTTGTACATAGAAAACAGAAAACCTACCACTGAAACTAGTGAAACTGTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
||
| CDS-3UTR CAA 90 bp | AGTATCATACAGGATAGGGTAGGGCAGATAGCAGTTCCTTCTTTTAAGTTGATTAGCCACCCAACAGCATaGACAAGAAAGACAAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SIIQDRVGQIAVPSFKLISHPTA*TRKTKS Trigger: GCTCTTTGTCTTTCTTGTCAATGCTGTTGGGTGGCT...AATCAACTTAAAAGAAGGAACTGCTATCTGCCCTACCCTATCCTGTATGATACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045140.5 |
||
| CDS-3UTR CAA 90 bp | AATAACAGTTTCACTAGTTTCAGTGGTAGGTTTTCTGTTTTCTATGTACAAGGGAGCCACCCAACAGCATaGACAAGAAAGACAAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: NNSFTSFSGRFSVFYVQGSHPTA*TRKTKS Trigger: GCTCTTTGTCTTTCTTGTCAATGCTGTTGGGTGGCT...CCCTTGTACATAGAAAACAGAAAACCTACCACTGAAACTAGTGAAACTGTTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
||
| CDS-3UTR CAA 90 bp | AATAACAGTTTCACTAGTTTCAGTGGTAGGTTTTCTGTTTTCTATGTACAAGGGAGTATGACAGCCAATTaGTATCTTCAGGTCAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: NNSFTSFSGRFSVFYVQGSMTAN*YLQVSR Trigger: TCTGCTGACCTGAAGATACAAATTGGCTGTCATACT...CCCTTGTACATAGAAAACAGAAAACCTACCACTGAAACTAGTGAAACTGTTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045054.11 ENSMUST00000121083.8 |
||
| CDS GCA 72 bp | AGAAGTCCTCATGAGATGCTACCACCATGCGGCCTCTaGCATAGGAAGAGGCGGCAACGAGGACCTGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: RSPHEMLPPCGL*HRKRRQRGPGP Trigger: TGGGCCAGGTCCTCGTTGCCGCCTCTTCCTATGGCAGAGGCCGCATGGTGGTAGCATCTCATGAGGACTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045054.11 ENSMUST00000045140.5 ENSMUST00000121083.8 |
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| CDS GCA 72 bp | TTTCCAGCAAGAAGTCCTCATGAGATGCTACCACCATaGGGCCTCTGCCATAGGAAGAGGCGGCAACGAGGA | + |
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Preference number: 6 (lower is better) Translates to: FPARSPHEMLPP*GLCHRKRRQRG Trigger: TCCTCGTTGCCGCCTCTTCCTATGGCAGAGGCCGCATGGTGGTAGCATCTCATGAGGACTTCTTGCTGGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045054.11 ENSMUST00000045140.5 ENSMUST00000121083.8 |
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| CDS GCA 72 bp | AAAGAGCTGGCTTTCCAGCAAGAAGTCCTCATGAGATaGTACCACCATGCGGCCTCTGCCATAGGAAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: KELAFQQEVLMR*YHHAASAIGRG Trigger: GCCTCTTCCTATGGCAGAGGCCGCATGGTGGTAGCATCTCATGAGGACTTCTTGCTGGAAAGCCAGCTCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045054.11 ENSMUST00000045140.5 ENSMUST00000121083.8 |
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| CDS GCA 72 bp | AACTCTATCATCATCACCCTGGGTATCCCAATCCCATaGTTCGCCTCCTATGAGCAAGCCCCCTCCACGTTT | + |
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Preference number: 6 (lower is better) Translates to: NSIIITLGIPIP*FASYEQAPSTF Trigger: AAACGTGGAGGGGGCTTGCTCATAGGAGGCGAAGCATGGGATTGGGATACCCAGGGTGATGATGATAGAGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045054.11 ENSMUST00000045140.5 ENSMUST00000121083.8 |
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| CDS CCA 72 bp | GGTCCTTGTTCCTATTTTAGGGGTACGGAAAGGTCCTaGATTGAGACTCTGGCTTGTGATGCTGATACCAAA | + |
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Preference number: 6 (lower is better) Translates to: GPCSYFRGTERS*IETLACDADTK Trigger: TTTGGTATCAGCATCACAAGCCAGAGTCTCAATCCAGGACCTTTCCGTACCCCTAAAATAGGAACAAGGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045054.11 ENSMUST00000045140.5 ENSMUST00000121083.8 |
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| CDS CAA 72 bp | CTTGTTCCTATTTTAGGGGTACGGAAAGGTCCTGGATaGAGACTCTGGCTTGTGATGCTGATACCAAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: LVPILGVRKGPG*RLWLVMLIPKA Trigger: TGCCTTTGGTATCAGCATCACAAGCCAGAGTCTCAATCCAGGACCTTTCCGTACCCCTAAAATAGGAACAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045054.11 ENSMUST00000045140.5 ENSMUST00000121083.8 |
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| CDS TCA 72 bp | AACCCCCAGGGAGTCATTGACTTCTGGCTCAATCTTTaGCTCTATTCCACAGCTCTCGAGAATTTTCACCAA | + |
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Preference number: 6 (lower is better) Translates to: NPQGVIDFWLNL*LYSTALENFHQ Trigger: TTGGTGAAAATTCTCGAGAGCTGTGGAATAGAGTCAAAGATTGAGCCAGAAGTCAATGACTCCCTGGGGGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045054.11 ENSMUST00000045140.5 ENSMUST00000121083.8 |
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