Pregenerated sensors for TC2N (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021187Ensembl transcript IDs: ENSMUST00000110047.9, ENSMUST00000160715.8, ENSMUST00000160830.2, ENSMUST00000162735.8
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGATGGTCTACATGTaGATGACAATGAACAATATGAAGGAATTGGTTCTCTCCTTCCAT | + |
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Preference number: 1 (lower is better) Translates to: CVCVCVCVCVLMVYM*MTMNNMKELVLSFH Trigger: ATGGAAGGAGAGAACCAATTCCTTCATATTGTTCATTGTCATTCACATGTAGACCATCAACACACACACACACACACACACACACACACA 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162735.8 |
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| 3UTR TCA 90 bp | ATAAAAGAACTAGAGTTTAAGAGGTTATTCCTACATCATAATAAGTaGTTCCTCTGGCCTAAAATATGTGGAACAAAGAGAGAGGCAGGC | + |
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Preference number: 1 (lower is better) Translates to: IKELEFKRLFLHHNK*FLWPKICGTKREAG Trigger: GCCTGCCTCTCTCTTTGTTCCACATATTTTAGGCCAGAGGAATCACTTATTATGATGTAGGAATAACCTCTTAAACTCTAGTTCTTTTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162735.8 |
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| 3UTR TCA 90 bp | CCACATTACTTCTGTTCTTCTGCATATCAACTTGCAGTTGCTATTTaGATTGAAATGCATTTGCCATACCAACATATTAAGGATGTTTGC | + |
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Preference number: 1 (lower is better) Translates to: PHYFCSSAYQLAVAI*IEMHLPYQHIKDVC Trigger: GCAAACATCCTTAATATGTTGGTATGGCAAATGCATTTCAATTCAAATAGCAACTGCAAGTTGATATGCAGAAGAACAGAAGTAATGTGG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110047.9 ENSMUST00000162735.8 |
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| 3UTR GCA 90 bp | CTTCTGCATATCAACTTGCAGTTGCTATTTGAATTGAAATGCATTTaGCATACCAACATATTAAGGATGTTTGCAAAACCTGAAAGGACT | + |
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Preference number: 1 (lower is better) Translates to: LLHINLQLLFELKCI*HTNILRMFAKPERT Trigger: AGTCCTTTCAGGTTTTGCAAACATCCTTAATATGTTGGTATGGCAAATGCATTTCAATTCAAATAGCAACTGCAAGTTGATATGCAGAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110047.9 |
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| 3UTR-3UTR CCA 90 bp | ACAGATGGTTGTGAGCCACCATGTGGTTGTTGGGATTTGAACTCTGAACCTTCGCTCAAATTTTCAGTGTaGGGACAAGCTCCTTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: TDGCEPPCGCWDLNSEPSLKFSV*GQAPFP Trigger: TGGAAAAGGAGCTTGTCCCCACACTGAAAATTTGAG...CGAAGGTTCAGAGTTCAAATCCCAACAACCACATGGTGGCTCACAACCATCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162735.8 |
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| 3UTR-3UTR TCA 90 bp | TTTAGTTCCCTTTTCCTTGTTACAAGTACAGGACAAGAAGAGCCTAAGCAAATACGTTACAGATGGTTGTaGGCCACCATGTGGTTGTTG | + |
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Preference number: 2 (lower is better) Translates to: FSSLFLVTSTGQEEPKQIRYRWL*ATMWLL Trigger: CAACAACCACATGGTGGCTCACAACCATCTGTAACG...TATTTGCTTAGGCTCTTCTTGTCCTGTACTTGTAACAAGGAAAAGGGAACTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162735.8 |
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| 3UTR CAA 90 bp | ATGAACAATATGAAGGAATTGGTTCTCTCCTTCCATCATATTGCATaGCAGGGATGGAACTCAAATTTTCAGTGTGGGGACAAGCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: MNNMKELVLSFHHIA*QGWNSNFQCGDKLL Trigger: AAGGAGCTTGTCCCCACACTGAAAATTTGAGTTCCATCCCTGCAATGCAATATGATGGAAGGAGAGAACCAATTCCTTCATATTGTTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162735.8 |
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| 3UTR TCA 72 bp | CAGATGGTTGTGAGCCACCATGTGGTTGTTGGGATTTaGACTCTGAACCTTCGGAAGAGCAGTCGGGTACTC | + |
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Preference number: 3 (lower is better) Translates to: QMVVSHHVVVGI*TLNLRKSSRVL Trigger: GAGTACCCGACTGCTCTTCCGAAGGTTCAGAGTTCAAATCCCAACAACCACATGGTGGCTCACAACCATCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162735.8 |
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| 3UTR TCA 72 bp | GTGTGTGTGTGTGTGTGTGTGTTGATGGTCTACATGTaGATGACAATGAACAATATGAAGGAATTGGTTCTC | + |
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Preference number: 3 (lower is better) Translates to: VCVCVCVLMVYM*MTMNNMKELVL Trigger: GAGAACCAATTCCTTCATATTGTTCATTGTCATTCACATGTAGACCATCAACACACACACACACACACACAC 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162735.8 |
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| 3UTR TCA 72 bp | CTAGAGTTTAAGAGGTTATTCCTACATCATAATAAGTaGTTCCTCTGGCCTAAAATATGTGGAACAAAGAGA | + |
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Preference number: 3 (lower is better) Translates to: LEFKRLFLHHNK*FLWPKICGTKR Trigger: TCTCTTTGTTCCACATATTTTAGGCCAGAGGAATCACTTATTATGATGTAGGAATAACCTCTTAAACTCTAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162735.8 |
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| 3UTR GCA 72 bp | CTGCATATCAACTTGCAGTTGCTATTTGAATTGAAATaGATTTGCCATACCAACATATTAAGGATGTTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: LHINLQLLFELK*ICHTNILRMFA Trigger: TGCAAACATCCTTAATATGTTGGTATGGCAAATGCATTTCAATTCAAATAGCAACTGCAAGTTGATATGCAG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110047.9 ENSMUST00000162735.8 |
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| 3UTR CAA 72 bp | ACAGATGGTTGTGAGCCACCATGTGGTTGTTGGGATTaGAACTCTGAACCTTCGGAAGAGCAGTCGGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWD*NSEPSEEQSGT Trigger: AGTACCCGACTGCTCTTCCGAAGGTTCAGAGTTCAAATCCCAACAACCACATGGTGGCTCACAACCATCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162735.8 |
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| CDS-3UTR TCA 90 bp | ACAGATGGTTGTGAGCCACCATGTGGTTGTTGGGATTTGAACTCTGAACCTTCGGTAAATCAGCTCTCCTaGGCTAAACATCCCCACTTT | + |
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Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWDLNSEPSVNQLS*AKHPHF Trigger: AAAGTGGGGATGTTTAGCTCAGGAGAGCTGATTTAC...CGAAGGTTCAGAGTTCAAATCCCAACAACCACATGGTGGCTCACAACCATCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162735.8 |
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| CDS-3UTR TCA 90 bp | ACAGATGGTTGTGAGCCACCATGTGGTTGTTGGGATTTGAACTCTGAACCTTCGCTGCTATTTACTGCTTaGAAACAAGTCCCCAGTTCA | + |
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Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWDLNSEPSLLFTA*KQVPSS Trigger: TGAACTGGGGACTTGTTTTCAAGCAGTAAATAGCAG...CGAAGGTTCAGAGTTCAAATCCCAACAACCACATGGTGGCTCACAACCATCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162735.8 |
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| 3UTR CAA 72 bp | ATGAAGGAATTGGTTCTCTCCTTCCATCATATTGCATaGCAGGGATGGAACTCAAATTTTCAGTGTGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: MKELVLSFHHIA*QGWNSNFQCGD Trigger: GTCCCCACACTGAAAATTTGAGTTCCATCCCTGCAATGCAATATGATGGAAGGAGAGAACCAATTCCTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162735.8 |
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| CDS-3UTR TCA 90 bp | CCAGACCACATTACTTCTGTTCTTCTGCATATCAACTTGCAGTTGCTATTTGAAGGAACCTTCTTTGGCTaGAGATTTGAAATGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: PDHITSVLLHINLQLLFEGTFFG*RFEMHW Trigger: CCAGTGCATTTCAAATCTTCAGCCAAAGAAGGTTCC...TTCAAATAGCAACTGCAAGTTGATATGCAGAAGAACAGAAGTAATGTGGTCTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110047.9 ENSMUST00000162735.8 |
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| CDS-3UTR TCA 90 bp | CCAGACCACATTACTTCTGTTCTTCTGCATATCAACTTGCAGTTGCTATTTGAACTCTGGATGAATCGCTaGGATGAAGTTGTAAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: PDHITSVLLHINLQLLFELWMNR*DEVVRS Trigger: TGATCTTACAACTTCATCTCAGCGATTCATCCAGAG...TTCAAATAGCAACTGCAAGTTGATATGCAGAAGAACAGAAGTAATGTGGTCTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110047.9 ENSMUST00000162735.8 |
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| CDS-3UTR TCA 90 bp | AATTCCAGACCACATTACTTCTGTTCTTCTGCATATCAACTTGCAGTTGCTATTGGAACCTTCTTTGGCTaGAGATTTGAAATGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: NSRPHYFCSSAYQLAVAIGTFFG*RFEMHW Trigger: CCAGTGCATTTCAAATCTTCAGCCAAAGAAGGTTCC...AATAGCAACTGCAAGTTGATATGCAGAAGAACAGAAGTAATGTGGTCTGGAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110047.9 ENSMUST00000162735.8 |
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| CDS-3UTR TCA 90 bp | AATTCCAGACCACATTACTTCTGTTCTTCTGCATATCAACTTGCAGTTGCTATTGTAAATCAGCTCTCCTaGGCTAAACATCCCCACTTT | + |
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Preference number: 4 (lower is better) Translates to: NSRPHYFCSSAYQLAVAIVNQLS*AKHPHF Trigger: AAAGTGGGGATGTTTAGCTCAGGAGAGCTGATTTAC...AATAGCAACTGCAAGTTGATATGCAGAAGAACAGAAGTAATGTGGTCTGGAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110047.9 ENSMUST00000162735.8 |
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| CDS-3UTR CCA 90 bp | GCTCCTTTTCCACCAAGCAATCCTCCTAGATCCAAGCTTTATTTATTCTTTGAAATTTTACTCTTCCACTaGAGGCCTTCAATAAGCGTG | + |
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Preference number: 4 (lower is better) Translates to: APFPPSNPPRSKLYLFFEILLFH*RPSISV Trigger: CACGCTTATTGAAGGCCTCCAGTGGAAGAGTAAAAT...TTCAAAGAATAAATAAAGCTTGGATCTAGGAGGATTGCTTGGTGGAAAAGGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162735.8 |
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| 3UTR CAA 72 bp | AGCTGCATTCCCAGTATCATTTTAGTTCCCTTTTCCTaGTTACAAGTACAGGACAAGAAGAGCCTAAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SCIPSIILVPFS*LQVQDKKSLSK Trigger: TTTGCTTAGGCTCTTCTTGTCCTGTACTTGTAACAAGGAAAAGGGAACTAAAATGATACTGGGAATGCAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162735.8 |
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| CDS-3UTR TCA 90 bp | CCAGACCACATTACTTCTGTTCTTCTGCATATCAACTTGCAGTTGCTATTTGAATCATTACAGCCAACTTaGGGCTTTACTAGAACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PDHITSVLLHINLQLLFESLQPT*GFTRTE Trigger: TTCTGTTCTAGTAAAGCCTCAAGTTGGCTGTAATGA...TTCAAATAGCAACTGCAAGTTGATATGCAGAAGAACAGAAGTAATGTGGTCTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110047.9 ENSMUST00000162735.8 |
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| CDS-3UTR TCA 90 bp | TTTAGTTCCCTTTTCCTTGTTACAAGTACAGGACAAGAAGAGCCTAAGCAAATATTGGGAGTCTGGGTTTaGATCTTAAATGCAAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: FSSLFLVTSTGQEEPKQILGVWV*ILNASL Trigger: GAGACTTGCATTTAAGATTCAAACCCAGACTCCCAA...TATTTGCTTAGGCTCTTCTTGTCCTGTACTTGTAACAAGGAAAAGGGAACTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162735.8 |
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| CDS-3UTR TCA 90 bp | CCAGACCACATTACTTCTGTTCTTCTGCATATCAACTTGCAGTTGCTATTTGAAACTAAGAGTTCTGAGTaGAAGAGAACACTCTCCAAT | + |
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Preference number: 4 (lower is better) Translates to: PDHITSVLLHINLQLLFETKSSE*KRTLSN Trigger: ATTGGAGAGTGTTCTCTTTCACTCAGAACTCTTAGT...TTCAAATAGCAACTGCAAGTTGATATGCAGAAGAACAGAAGTAATGTGGTCTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110047.9 ENSMUST00000162735.8 |
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| CDS-3UTR TCA 90 bp | CCAGACCACATTACTTCTGTTCTTCTGCATATCAACTTGCAGTTGCTATTTGAATCAAGAATTTGCAGCTaGATCCTGCTATTTACTGCT | + |
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Preference number: 4 (lower is better) Translates to: PDHITSVLLHINLQLLFESRICS*ILLFTA Trigger: AGCAGTAAATAGCAGGATTCAGCTGCAAATTCTTGA...TTCAAATAGCAACTGCAAGTTGATATGCAGAAGAACAGAAGTAATGTGGTCTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110047.9 ENSMUST00000162735.8 |
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| CDS-3UTR GCA 90 bp | CCAGACCACATTACTTCTGTTCTTCTGCATATCAACTTGCAGTTGCTATTTGAACTTATATCTCTGCACTaGAAAACTGTGATCCAGATC | + |
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Preference number: 4 (lower is better) Translates to: PDHITSVLLHINLQLLFELISLH*KTVIQI Trigger: GATCTGGATCACAGTTTTGCAGTGCAGAGATATAAG...TTCAAATAGCAACTGCAAGTTGATATGCAGAAGAACAGAAGTAATGTGGTCTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110047.9 ENSMUST00000162735.8 |
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| CDS-3UTR CCA 90 bp | CCAGACCACATTACTTCTGTTCTTCTGCATATCAACTTGCAGTTGCTATTTGAACAATGGTTTTCTTCTTaGGAGTCTGGGTTTGAATCT | + |
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Preference number: 4 (lower is better) Translates to: PDHITSVLLHINLQLLFEQWFSS*ESGFES Trigger: AGATTCAAACCCAGACTCCCAAGAAGAAAACCATTG...TTCAAATAGCAACTGCAAGTTGATATGCAGAAGAACAGAAGTAATGTGGTCTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110047.9 ENSMUST00000162735.8 |
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| CDS-3UTR CCA 90 bp | AATTCCAGACCACATTACTTCTGTTCTTCTGCATATCAACTTGCAGTTGCTATTGAGAACACTCTCCAATaGTTTTCTTCTTGGGAGTCT | + |
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Preference number: 4 (lower is better) Translates to: NSRPHYFCSSAYQLAVAIENTLQ*FSSWES Trigger: AGACTCCCAAGAAGAAAACCATTGGAGAGTGTTCTC...AATAGCAACTGCAAGTTGATATGCAGAAGAACAGAAGTAATGTGGTCTGGAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110047.9 ENSMUST00000162735.8 |
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| CDS-3UTR CCA 90 bp | AATTCCAGACCACATTACTTCTGTTCTTCTGCATATCAACTTGCAGTTGCTATTGAGTACTCCATTTCCTaGGTACTAAGAGTTCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: NSRPHYFCSSAYQLAVAIEYSIS*VLRVLS Trigger: ACTCAGAACTCTTAGTACCCAGGAAATGGAGTACTC...AATAGCAACTGCAAGTTGATATGCAGAAGAACAGAAGTAATGTGGTCTGGAATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110047.9 ENSMUST00000162735.8 |
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| CDS-3UTR TCA 90 bp | AATTCCAGACCACATTACTTCTGTTCTTCTGCATATCAACTTGCAGTTGCTATTTCATTACAGCCAACTTaGGGCTTTACTAGAACAGAA | + |
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Preference number: 4 (lower is better) Translates to: NSRPHYFCSSAYQLAVAISLQPT*GFTRTE Trigger: TTCTGTTCTAGTAAAGCCTCAAGTTGGCTGTAATGA...AATAGCAACTGCAAGTTGATATGCAGAAGAACAGAAGTAATGTGGTCTGGAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110047.9 ENSMUST00000162735.8 |
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| CDS-3UTR TCA 90 bp | AATTCCAGACCACATTACTTCTGTTCTTCTGCATATCAACTTGCAGTTGCTATTTGTTTTGTTTCACAATaGGGAAGAAAGCGCCTACTT | + |
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Preference number: 4 (lower is better) Translates to: NSRPHYFCSSAYQLAVAICFVSQ*GRKRLL Trigger: AAGTAGGCGCTTTCTTCCTCATTGTGAAACAAAACA...AATAGCAACTGCAAGTTGATATGCAGAAGAACAGAAGTAATGTGGTCTGGAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110047.9 ENSMUST00000162735.8 |
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| CDS-3UTR TCA 90 bp | TTTAGTTCCCTTTTCCTTGTTACAAGTACAGGACAAGAAGAGCCTAAGCAAATAGATGAATCGCTGAGATaGAGTTGTAAGATCAAGCAT | + |
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Preference number: 4 (lower is better) Translates to: FSSLFLVTSTGQEEPKQIDESLR*SCKIKH Trigger: ATGCTTGATCTTACAACTTCATCTCAGCGATTCATC...TATTTGCTTAGGCTCTTCTTGTCCTGTACTTGTAACAAGGAAAAGGGAACTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162735.8 |
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| CDS-3UTR TCA 90 bp | ATTTGCCATACCAACATATTAAGGATGTTTGCAAAACCTGAAAGGACTCATTACCTCTGGATGAATCGCTaGGATGAAGTTGTAAGATCA | + |
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Preference number: 4 (lower is better) Translates to: ICHTNILRMFAKPERTHYLWMNR*DEVVRS Trigger: TGATCTTACAACTTCATCTCAGCGATTCATCCAGAG...GTAATGAGTCCTTTCAGGTTTTGCAAACATCCTTAATATGTTGGTATGGCAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110047.9 |
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| CDS-3UTR TCA 90 bp | ATTTGCCATACCAACATATTAAGGATGTTTGCAAAACCTGAAAGGACTCATTACCTTTGGCTGAAGATTTaGAATGCACTGGTTTGGACA | + |
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Preference number: 4 (lower is better) Translates to: ICHTNILRMFAKPERTHYLWLKI*NALVWT Trigger: TGTCCAAACCAGTGCATTTCAAATCTTCAGCCAAAG...GTAATGAGTCCTTTCAGGTTTTGCAAACATCCTTAATATGTTGGTATGGCAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110047.9 |
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| CDS-3UTR TCA 90 bp | TTGAGCAAATTAATTCCAGACCACATTACTTCTGTTCTTCTGCATATCAACTTGCTTTGGCTGAAGATTTaGAATGCACTGGTTTGGACA | + |
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Preference number: 4 (lower is better) Translates to: LSKLIPDHITSVLLHINLLWLKI*NALVWT Trigger: TGTCCAAACCAGTGCATTTCAAATCTTCAGCCAAAG...CAAGTTGATATGCAGAAGAACAGAAGTAATGTGGTCTGGAATTAATTTGCTCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110047.9 ENSMUST00000162735.8 |
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| CDS-3UTR TCA 90 bp | TTGAAATGCATTTGCCATACCAACATATTAAGGATGTTTGCAAAACCTGAAAGGTTGGGAGTCTGGGTTTaGATCTTAAATGCAAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: LKCICHTNILRMFAKPERLGVWV*ILNASL Trigger: GAGACTTGCATTTAAGATTCAAACCCAGACTCCCAA...CCTTTCAGGTTTTGCAAACATCCTTAATATGTTGGTATGGCAAATGCATTTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110047.9 |
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| CDS-3UTR TCA 90 bp | ATTTGCCATACCAACATATTAAGGATGTTTGCAAAACCTGAAAGGACTCATTACCTGCTATTTACTGCTTaGAAACAAGTCCCCAGTTCA | + |
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Preference number: 4 (lower is better) Translates to: ICHTNILRMFAKPERTHYLLFTA*KQVPSS Trigger: TGAACTGGGGACTTGTTTTCAAGCAGTAAATAGCAG...GTAATGAGTCCTTTCAGGTTTTGCAAACATCCTTAATATGTTGGTATGGCAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110047.9 |
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| CDS-3UTR GCA 90 bp | AATTCCAGACCACATTACTTCTGTTCTTCTGCATATCAACTTGCAGTTGCTATTAATCCTGCTATTTACTaGTTGAAAACAAGTCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: NSRPHYFCSSAYQLAVAINPAIY*LKTSPQ Trigger: CTGGGGACTTGTTTTCAAGCAGTAAATAGCAGGATT...AATAGCAACTGCAAGTTGATATGCAGAAGAACAGAAGTAATGTGGTCTGGAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110047.9 ENSMUST00000162735.8 |
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| CDS-3UTR GCA 90 bp | ATTTGCCATACCAACATATTAAGGATGTTTGCAAAACCTGAAAGGACTCATTACACTTGGAAGGTATTGTaGCTCAAGAATTTGCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: ICHTNILRMFAKPERTHYTWKVL*LKNLQL Trigger: CAGCTGCAAATTCTTGAGGCACAATACCTTCCAAGT...GTAATGAGTCCTTTCAGGTTTTGCAAACATCCTTAATATGTTGGTATGGCAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110047.9 |
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| CDS-3UTR GCA 90 bp | TTGAGCAAATTAATTCCAGACCACATTACTTCTGTTCTTCTGCATATCAACTTGACTTGGAAGGTATTGTaGCTCAAGAATTTGCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: LSKLIPDHITSVLLHINLTWKVL*LKNLQL Trigger: CAGCTGCAAATTCTTGAGGCACAATACCTTCCAAGT...CAAGTTGATATGCAGAAGAACAGAAGTAATGTGGTCTGGAATTAATTTGCTCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110047.9 ENSMUST00000162735.8 |
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| CDS-3UTR CCA 90 bp | TTGAGCAAATTAATTCCAGACCACATTACTTCTGTTCTTCTGCATATCAACTTGGAGAACACTCTCCAATaGTTTTCTTCTTGGGAGTCT | + |
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Preference number: 4 (lower is better) Translates to: LSKLIPDHITSVLLHINLENTLQ*FSSWES Trigger: AGACTCCCAAGAAGAAAACCATTGGAGAGTGTTCTC...CAAGTTGATATGCAGAAGAACAGAAGTAATGTGGTCTGGAATTAATTTGCTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110047.9 ENSMUST00000162735.8 |
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| CDS-3UTR CCA 90 bp | ATTTGCCATACCAACATATTAAGGATGTTTGCAAAACCTGAAAGGACTCATTACATTTTACTCTTCCACTaGAGGCCTTCAATAAGCGTG | + |
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Preference number: 4 (lower is better) Translates to: ICHTNILRMFAKPERTHYILLFH*RPSISV Trigger: CACGCTTATTGAAGGCCTCCAGTGGAAGAGTAAAAT...GTAATGAGTCCTTTCAGGTTTTGCAAACATCCTTAATATGTTGGTATGGCAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110047.9 |
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| CDS-3UTR CCA 90 bp | CCAGACCACATTACTTCTGTTCTTCTGCATATCAACTTGCAGTTGCTATTTGAATCACTTATCCAGAGCTaGCCTACAAAATGTTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: PDHITSVLLHINLQLLFESLIQS*PTKCFL Trigger: AAGAAAACATTTTGTAGGCCAGCTCTGGATAAGTGA...TTCAAATAGCAACTGCAAGTTGATATGCAGAAGAACAGAAGTAATGTGGTCTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110047.9 ENSMUST00000162735.8 |
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| CDS-3UTR TCA 90 bp | ATTTGCCATACCAACATATTAAGGATGTTTGCAAAACCTGAAAGGACTCATTACGATGAATCGCTGAGATaGAGTTGTAAGATCAAGCAT | + |
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Preference number: 4 (lower is better) Translates to: ICHTNILRMFAKPERTHYDESLR*SCKIKH Trigger: ATGCTTGATCTTACAACTTCATCTCAGCGATTCATC...GTAATGAGTCCTTTCAGGTTTTGCAAACATCCTTAATATGTTGGTATGGCAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110047.9 |
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| CDS-3UTR TCA 90 bp | TTGAAATGCATTTGCCATACCAACATATTAAGGATGTTTGCAAAACCTGAAAGGACTAAGAGTTCTGAGTaGAAGAGAACACTCTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LKCICHTNILRMFAKPERTKSSE*KRTLSN Trigger: ATTGGAGAGTGTTCTCTTTCACTCAGAACTCTTAGT...CCTTTCAGGTTTTGCAAACATCCTTAATATGTTGGTATGGCAAATGCATTTCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110047.9 |
||
| CDS-3UTR TCA 90 bp | TTGAGCAAATTAATTCCAGACCACATTACTTCTGTTCTTCTGCATATCAACTTGTCAAGAATTTGCAGCTaGATCCTGCTATTTACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSKLIPDHITSVLLHINLSRICS*ILLFTA Trigger: AGCAGTAAATAGCAGGATTCAGCTGCAAATTCTTGA...CAAGTTGATATGCAGAAGAACAGAAGTAATGTGGTCTGGAATTAATTTGCTCAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110047.9 ENSMUST00000162735.8 |
||
| CDS-3UTR GCA 90 bp | ATTTGCCATACCAACATATTAAGGATGTTTGCAAAACCTGAAAGGACTCATTACCTTATATCTCTGCACTaGAAAACTGTGATCCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: ICHTNILRMFAKPERTHYLISLH*KTVIQI Trigger: GATCTGGATCACAGTTTTGCAGTGCAGAGATATAAG...GTAATGAGTCCTTTCAGGTTTTGCAAACATCCTTAATATGTTGGTATGGCAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110047.9 |
||
| CDS-3UTR GCA 90 bp | TTGAGCAAATTAATTCCAGACCACATTACTTCTGTTCTTCTGCATATCAACTTGAATCCTGCTATTTACTaGTTGAAAACAAGTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSKLIPDHITSVLLHINLNPAIY*LKTSPQ Trigger: CTGGGGACTTGTTTTCAAGCAGTAAATAGCAGGATT...CAAGTTGATATGCAGAAGAACAGAAGTAATGTGGTCTGGAATTAATTTGCTCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110047.9 ENSMUST00000162735.8 |
||
| CDS-3UTR GCA 90 bp | GCTCCTTTTCCACCAAGCAATCCTCCTAGATCCAAGCTTTATTTATTCTTTGAAGATGGATTTAACTTGTaGCACTTGATAACAACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: APFPPSNPPRSKLYLFFEDGFNL*HLITTF Trigger: AAAGGTTGTTATCAAGTGGCACAAGTTAAATCCATC...TTCAAAGAATAAATAAAGCTTGGATCTAGGAGGATTGCTTGGTGGAAAAGGAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162735.8 |
||
| CDS-3UTR CCA 90 bp | TTGAAATGCATTTGCCATACCAACATATTAAGGATGTTTGCAAAACCTGAAAGGTATACACATCATAGCTaGGTCCATGGTAGAATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LKCICHTNILRMFAKPERYTHHS*VHGRMN Trigger: GTTCATTCTACCATGGACCCAGCTATGATGTGTATA...CCTTTCAGGTTTTGCAAACATCCTTAATATGTTGGTATGGCAAATGCATTTCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110047.9 |
||
| CDS-3UTR CCA 90 bp | TTGAGCAAATTAATTCCAGACCACATTACTTCTGTTCTTCTGCATATCAACTTGTATACACATCATAGCTaGGTCCATGGTAGAATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LSKLIPDHITSVLLHINLYTHHS*VHGRMN Trigger: GTTCATTCTACCATGGACCCAGCTATGATGTGTATA...CAAGTTGATATGCAGAAGAACAGAAGTAATGTGGTCTGGAATTAATTTGCTCAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110047.9 ENSMUST00000162735.8 |
||
| CDS-3UTR CCA 90 bp | CCAGACCACATTACTTCTGTTCTTCTGCATATCAACTTGCAGTTGCTATTTGAAGCAAGTCTCACAGCTTaGAGATTTTGTAGTTTAATA | + |
|
Preference number: 4 (lower is better) Translates to: PDHITSVLLHINLQLLFEASLTA*RFCSLI Trigger: TATTAAACTACAAAATCTCCAAGCTGTGAGACTTGC...TTCAAATAGCAACTGCAAGTTGATATGCAGAAGAACAGAAGTAATGTGGTCTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110047.9 ENSMUST00000162735.8 |
||
| CDS-3UTR CCA 90 bp | AATTCCAGACCACATTACTTCTGTTCTTCTGCATATCAACTTGCAGTTGCTATTTCACTTATCCAGAGCTaGCCTACAAAATGTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NSRPHYFCSSAYQLAVAISLIQS*PTKCFL Trigger: AAGAAAACATTTTGTAGGCCAGCTCTGGATAAGTGA...AATAGCAACTGCAAGTTGATATGCAGAAGAACAGAAGTAATGTGGTCTGGAATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110047.9 ENSMUST00000162735.8 |
||
| CDS-3UTR GCA 90 bp | TTGAGCAAATTAATTCCAGACCACATTACTTCTGTTCTTCTGCATATCAACTTGTTTGCAGCTGAATCCTaGTATTTACTGCTTGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LSKLIPDHITSVLLHINLFAAES*YLLLEN Trigger: GTTTTCAAGCAGTAAATAGCAGGATTCAGCTGCAAA...CAAGTTGATATGCAGAAGAACAGAAGTAATGTGGTCTGGAATTAATTTGCTCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110047.9 ENSMUST00000162735.8 |
||
| 3UTR CAA 72 bp | CTTCCTAGTCATCACAGACATGGACATTTTATTGATTaGATACGCCCTGAAGAAACACTAAATAAATTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPSHHRHGHFID*IRPEETLNKFP Trigger: TGGAAATTTATTTAGTGTTTCTTCAGGGCGTATCAAATCAATAAAATGTCCATGTCTGTGATGACTAGGAAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162735.8 |
||
| CDS-3UTR GCA 90 bp | TTGAAATGCATTTGCCATACCAACATATTAAGGATGTTTGCAAAACCTGAAAGGGATGGATTTAACTTGTaGCACTTGATAACAACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LKCICHTNILRMFAKPERDGFNL*HLITTF Trigger: AAAGGTTGTTATCAAGTGGCACAAGTTAAATCCATC...CCTTTCAGGTTTTGCAAACATCCTTAATATGTTGGTATGGCAAATGCATTTCAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110047.9 |
||
| CDS-3UTR CCA 90 bp | TTGAAATGCATTTGCCATACCAACATATTAAGGATGTTTGCAAAACCTGAAAGGGCAAGTCTCACAGCTTaGAGATTTTGTAGTTTAATA | + |
|
Preference number: 4 (lower is better) Translates to: LKCICHTNILRMFAKPERASLTA*RFCSLI Trigger: TATTAAACTACAAAATCTCCAAGCTGTGAGACTTGC...CCTTTCAGGTTTTGCAAACATCCTTAATATGTTGGTATGGCAAATGCATTTCAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110047.9 |
||
| CDS-3UTR CAA 90 bp | ACAGATGGTTGTGAGCCACCATGTGGTTGTTGGGATTTGAACTCTGAACCTTCGCCTGGGCACCACAAATaGTACTTCTTTACCATCACA | + |
|
Preference number: 5 (lower is better) Translates to: TDGCEPPCGCWDLNSEPSPGHHK*YFFTIT Trigger: TGTGATGGTAAAGAAGTACAATTTGTGGTGCCCAGG...CGAAGGTTCAGAGTTCAAATCCCAACAACCACATGGTGGCTCACAACCATCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162735.8 |
||
| CDS-3UTR CAA 90 bp | ACAGATGGTTGTGAGCCACCATGTGGTTGTTGGGATTTGAACTCTGAACCTTCGAGATCAAGCATAGATTaGCTTAGCCCAGAGGAACCA | + |
|
Preference number: 5 (lower is better) Translates to: TDGCEPPCGCWDLNSEPSRSSID*LSPEEP Trigger: TGGTTCCTCTGGGCTAAGCAAATCTATGCTTGATCT...CGAAGGTTCAGAGTTCAAATCCCAACAACCACATGGTGGCTCACAACCATCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162735.8 |
||
| CDS-3UTR CAA 90 bp | ACAGATGGTTGTGAGCCACCATGTGGTTGTTGGGATTTGAACTCTGAACCTTCGTTTAACTTGTGCCACTaGATAACAACCTTTTCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: TDGCEPPCGCWDLNSEPSFNLCH*ITTFSG Trigger: TCCGGAAAAGGTTGTTATCAAGTGGCACAAGTTAAA...CGAAGGTTCAGAGTTCAAATCCCAACAACCACATGGTGGCTCACAACCATCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162735.8 |
||
| CDS TCA 90 bp | TATTTCCAACGAGTACTCCATTTCCTGGGTACTAAGAGTTCTGAGTaGAAGAGAACACTCTCCAATGGTTTTCTTCTTGGGAGTCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: YFQRVLHFLGTKSSE*KRTLSNGFLLGSLG Trigger: ACCCAGACTCCCAAGAAGAAAACCATTGGAGAGTGTTCTCTTTCACTCAGAACTCTTAGTACCCAGGAAATGGAGTACTCGTTGGAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110047.9 ENSMUST00000160830.2 ENSMUST00000162735.8 |
||
| CDS TCA 90 bp | CTACTAGGAACACTGGAAAATGAGTCATGTCTCTGGATGAATCGCTaGGATGAAGTTGTAAGATCAAGCATAGATTTGCTTAGCCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LLGTLENESCLWMNR*DEVVRSSIDLLSPE Trigger: CTCTGGGCTAAGCAAATCTATGCTTGATCTTACAACTTCATCTCAGCGATTCATCCAGAGACATGACTCATTTTCCAGTGTTCCTAGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110047.9 ENSMUST00000160715.8 ENSMUST00000160830.2 ENSMUST00000162735.8 |
||
| CDS GCA 90 bp | AAGGTATTGTGCCTCAAGAATTTGCAGCTGAATCCTGCTATTTACTaGTTGAAAACAAGTCCCCAGTTCAAGTTCTGCTTGGCAAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: KVLCLKNLQLNPAIY*LKTSPQFKFCLANR Trigger: TCTGTTTGCCAAGCAGAACTTGAACTGGGGACTTGTTTTCAAGCAGTAAATAGCAGGATTCAGCTGCAAATTCTTGAGGCACAATACCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110047.9 ENSMUST00000160830.2 ENSMUST00000162735.8 |
||
| CDS GCA 90 bp | ATGAACTTGGAAGGTATTGTGCCTCAAGAATTTGCAGCTGAATCCTaGTATTTACTGCTTGAAAACAAGTCCCCAGTTCAAGTTCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: MNLEGIVPQEFAAES*YLLLENKSPVQVLL Trigger: AAGCAGAACTTGAACTGGGGACTTGTTTTCAAGCAGTAAATAGCAGGATTCAGCTGCAAATTCTTGAGGCACAATACCTTCCAAGTTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000110047.9 ENSMUST00000160715.8 ENSMUST00000160830.2 ENSMUST00000162735.8 |
||
| CDS GCA 90 bp | AAGGTATTGTGCCTCAAGAATTTGCAGCTGAATCCTGCTATTTACTaGTTGAAAACAAGTCCCCAGTTCAAGTTCTGCTTGGCAAACATT | + |
|
Preference number: 5 (lower is better) Translates to: KVLCLKNLQLNPAIY*LKTSPQFKFCLANI Trigger: AATGTTTGCCAAGCAGAACTTGAACTGGGGACTTGTTTTCAAGCAGTAAATAGCAGGATTCAGCTGCAAATTCTTGAGGCACAATACCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160715.8 |
||
| CDS-3UTR CAA 90 bp | CCAGACCACATTACTTCTGTTCTTCTGCATATCAACTTGCAGTTGCTATTTGAAAGATCAAGCATAGATTaGCTTAGCCCAGAGGAACCA | + |
|
Preference number: 5 (lower is better) Translates to: PDHITSVLLHINLQLLFERSSID*LSPEEP Trigger: TGGTTCCTCTGGGCTAAGCAAATCTATGCTTGATCT...TTCAAATAGCAACTGCAAGTTGATATGCAGAAGAACAGAAGTAATGTGGTCTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110047.9 ENSMUST00000162735.8 |
||
| CDS-3UTR CAA 90 bp | GCTCCTTTTCCACCAAGCAATCCTCCTAGATCCAAGCTTTATTTATTCTTTGAACCTGCTATTTACTGCTaGAAAACAAGTCCCCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: APFPPSNPPRSKLYLFFEPAIYC*KTSPQF Trigger: GAACTGGGGACTTGTTTTCAAGCAGTAAATAGCAGG...TTCAAAGAATAAATAAAGCTTGGATCTAGGAGGATTGCTTGGTGGAAAAGGAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162735.8 |
||
| CDS-3UTR CAA 90 bp | CCAGACCACATTACTTCTGTTCTTCTGCATATCAACTTGCAGTTGCTATTTGAATCTTTGGCTGAAGATTaGAAATGCACTGGTTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PDHITSVLLHINLQLLFESLAED*KCTGLD Trigger: GTCCAAACCAGTGCATTTCAAATCTTCAGCCAAAGA...TTCAAATAGCAACTGCAAGTTGATATGCAGAAGAACAGAAGTAATGTGGTCTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110047.9 ENSMUST00000162735.8 |
||
| CDS-3UTR CAA 90 bp | GCTCCTTTTCCACCAAGCAATCCTCCTAGATCCAAGCTTTATTTATTCTTTGAACTTGGGAGTCTGGGTTaGAATCTTAAATGCAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: APFPPSNPPRSKLYLFFELGSLG*NLKCKS Trigger: AGACTTGCATTTAAGATTCAAACCCAGACTCCCAAG...TTCAAAGAATAAATAAAGCTTGGATCTAGGAGGATTGCTTGGTGGAAAAGGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162735.8 |
||
| CDS-3UTR CAA 90 bp | AATTCCAGACCACATTACTTCTGTTCTTCTGCATATCAACTTGCAGTTGCTATTCCTGCTATTTACTGCTaGAAAACAAGTCCCCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: NSRPHYFCSSAYQLAVAIPAIYC*KTSPQF Trigger: GAACTGGGGACTTGTTTTCAAGCAGTAAATAGCAGG...AATAGCAACTGCAAGTTGATATGCAGAAGAACAGAAGTAATGTGGTCTGGAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110047.9 ENSMUST00000162735.8 |
||
| CDS-3UTR CAA 90 bp | CCAGACCACATTACTTCTGTTCTTCTGCATATCAACTTGCAGTTGCTATTTGAATTGTGCCTCAAGAATTaGCAGCTGAATCCTGCTATT | + |
|
Preference number: 5 (lower is better) Translates to: PDHITSVLLHINLQLLFELCLKN*QLNPAI Trigger: AATAGCAGGATTCAGCTGCAAATTCTTGAGGCACAA...TTCAAATAGCAACTGCAAGTTGATATGCAGAAGAACAGAAGTAATGTGGTCTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110047.9 ENSMUST00000162735.8 |
||
| CDS TCA 90 bp | GAAAGAGAACACTCTCCAATGGTTTTCTTCTTGGGAGTCTGGGTTTaGATCTTAAATGCAAGTCTCACAGCTTGGAGATTTTGTAGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: EREHSPMVFFLGVWV*ILNASLTAWRFCSL Trigger: TAAACTACAAAATCTCCAAGCTGTGAGACTTGCATTTAAGATTCAAACCCAGACTCCCAAGAAGAAAACCATTGGAGAGTGTTCTCTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110047.9 ENSMUST00000160830.2 ENSMUST00000162735.8 |
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| CDS GCA 90 bp | AACAACCTTTTCCGGATTTGTAATGGTCTCTTTCCATTGATTCACTaGTTCAATATTATTACTGTCTTCACTTATCCAGAGCTGGCCTAC | + |
|
Preference number: 5 (lower is better) Translates to: NNLFRICNGLFPLIH*FNIITVFTYPELAY Trigger: GTAGGCCAGCTCTGGATAAGTGAAGACAGTAATAATATTGAAGCAGTGAATCAATGGAAAGAGACCATTACAAATCCGGAAAAGGTTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110047.9 ENSMUST00000160715.8 ENSMUST00000160830.2 ENSMUST00000162735.8 |
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| CDS CCA 90 bp | GAAATTTTTGAAGGTGCTATTATTTCCAACGAGTACTCCATTTCCTaGGTACTAAGAGTTCTGAGTGAAAGAGAACACTCTCCAATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: EIFEGAIISNEYSIS*VLRVLSEREHSPMV Trigger: AACCATTGGAGAGTGTTCTCTTTCACTCAGAACTCTTAGTACCCAGGAAATGGAGTACTCGTTGGAAATAATAGCACCTTCAAAAATTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000110047.9 ENSMUST00000160830.2 ENSMUST00000162735.8 |
||
| CDS-3UTR CAA 90 bp | TTGAGCAAATTAATTCCAGACCACATTACTTCTGTTCTTCTGCATATCAACTTGCCTGGGCACCACAAATaGTACTTCTTTACCATCACA | + |
|
Preference number: 5 (lower is better) Translates to: LSKLIPDHITSVLLHINLPGHHK*YFFTIT Trigger: TGTGATGGTAAAGAAGTACAATTTGTGGTGCCCAGG...CAAGTTGATATGCAGAAGAACAGAAGTAATGTGGTCTGGAATTAATTTGCTCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110047.9 ENSMUST00000162735.8 |
||
| CDS-3UTR CAA 90 bp | AATTCCAGACCACATTACTTCTGTTCTTCTGCATATCAACTTGCAGTTGCTATTCTTGGGAGTCTGGGTTaGAATCTTAAATGCAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: NSRPHYFCSSAYQLAVAILGSLG*NLKCKS Trigger: AGACTTGCATTTAAGATTCAAACCCAGACTCCCAAG...AATAGCAACTGCAAGTTGATATGCAGAAGAACAGAAGTAATGTGGTCTGGAATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110047.9 ENSMUST00000162735.8 |
||
| CDS-3UTR CAA 90 bp | AATTCCAGACCACATTACTTCTGTTCTTCTGCATATCAACTTGCAGTTGCTATTTTGTGCCTCAAGAATTaGCAGCTGAATCCTGCTATT | + |
|
Preference number: 5 (lower is better) Translates to: NSRPHYFCSSAYQLAVAILCLKN*QLNPAI Trigger: AATAGCAGGATTCAGCTGCAAATTCTTGAGGCACAA...AATAGCAACTGCAAGTTGATATGCAGAAGAACAGAAGTAATGTGGTCTGGAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110047.9 ENSMUST00000162735.8 |
||
| CDS-3UTR CAA 90 bp | AATTCCAGACCACATTACTTCTGTTCTTCTGCATATCAACTTGCAGTTGCTATTAAGGTGTTGATGAACTaGGAAGGTATTGTGCCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: NSRPHYFCSSAYQLAVAIKVLMN*EGIVPQ Trigger: TTGAGGCACAATACCTTCCAAGTTCATCAACACCTT...AATAGCAACTGCAAGTTGATATGCAGAAGAACAGAAGTAATGTGGTCTGGAATT 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110047.9 ENSMUST00000162735.8 |
||
| CDS-3UTR CAA 90 bp | ATTTGCCATACCAACATATTAAGGATGTTTGCAAAACCTGAAAGGACTCATTACGCATTGGAACCTTCTTaGGCTGAAGATTTGAAATGC | + |
|
Preference number: 5 (lower is better) Translates to: ICHTNILRMFAKPERTHYALEPS*AEDLKC Trigger: GCATTTCAAATCTTCAGCCAAAGAAGGTTCCAATGC...GTAATGAGTCCTTTCAGGTTTTGCAAACATCCTTAATATGTTGGTATGGCAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110047.9 |
||
| CDS-3UTR CAA 90 bp | TTGAGCAAATTAATTCCAGACCACATTACTTCTGTTCTTCTGCATATCAACTTGGCATTGGAACCTTCTTaGGCTGAAGATTTGAAATGC | + |
|
Preference number: 5 (lower is better) Translates to: LSKLIPDHITSVLLHINLALEPS*AEDLKC Trigger: GCATTTCAAATCTTCAGCCAAAGAAGGTTCCAATGC...CAAGTTGATATGCAGAAGAACAGAAGTAATGTGGTCTGGAATTAATTTGCTCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110047.9 ENSMUST00000162735.8 |
||
| CDS-3UTR CAA 90 bp | TTGAGCAAATTAATTCCAGACCACATTACTTCTGTTCTTCTGCATATCAACTTGAAGGTGTTGATGAACTaGGAAGGTATTGTGCCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: LSKLIPDHITSVLLHINLKVLMN*EGIVPQ Trigger: TTGAGGCACAATACCTTCCAAGTTCATCAACACCTT...CAAGTTGATATGCAGAAGAACAGAAGTAATGTGGTCTGGAATTAATTTGCTCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110047.9 ENSMUST00000162735.8 |
||
| CDS-3UTR CAA 90 bp | CCAGACCACATTACTTCTGTTCTTCTGCATATCAACTTGCAGTTGCTATTTGAATCAAAGTCAAAGGTGTaGATGAACTTGGAAGGTATT | + |
|
Preference number: 5 (lower is better) Translates to: PDHITSVLLHINLQLLFESKSKV*MNLEGI Trigger: AATACCTTCCAAGTTCATCAACACCTTTGACTTTGA...TTCAAATAGCAACTGCAAGTTGATATGCAGAAGAACAGAAGTAATGTGGTCTGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110047.9 ENSMUST00000162735.8 |
||
| CDS-3UTR CAA 90 bp | AATTCCAGACCACATTACTTCTGTTCTTCTGCATATCAACTTGCAGTTGCTATTTTTAACTTGTGCCACTaGATAACAACCTTTTCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: NSRPHYFCSSAYQLAVAIFNLCH*ITTFSG Trigger: TCCGGAAAAGGTTGTTATCAAGTGGCACAAGTTAAA...AATAGCAACTGCAAGTTGATATGCAGAAGAACAGAAGTAATGTGGTCTGGAATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110047.9 ENSMUST00000162735.8 |
||
| CDS-3UTR CAA 90 bp | AATTCCAGACCACATTACTTCTGTTCTTCTGCATATCAACTTGCAGTTGCTATTCAAGATGGATTTAACTaGTGCCACTTGATAACAACC | + |
|
Preference number: 5 (lower is better) Translates to: NSRPHYFCSSAYQLAVAIQDGFN*CHLITT Trigger: GGTTGTTATCAAGTGGCACAAGTTAAATCCATCTTG...AATAGCAACTGCAAGTTGATATGCAGAAGAACAGAAGTAATGTGGTCTGGAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110047.9 ENSMUST00000162735.8 |
||
| CDS TCA 90 bp | CACTTGATAACAACCTTTTCCGGATTTGTAATGGTCTCTTTCCATTaGTTCACTGCTTCAATATTATTACTGTCTTCACTTATCCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: HLITTFSGFVMVSFH*FTASILLLSSLIQS Trigger: GCTCTGGATAAGTGAAGACAGTAATAATATTGAAGCAGTGAATCAATGGAAAGAGACCATTACAAATCCGGAAAAGGTTGTTATCAAGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110047.9 ENSMUST00000160715.8 ENSMUST00000160830.2 ENSMUST00000162735.8 |
||
| CDS-3UTR CAA 90 bp | TTGAGCAAATTAATTCCAGACCACATTACTTCTGTTCTTCTGCATATCAACTTGCAAGATGGATTTAACTaGTGCCACTTGATAACAACC | + |
|
Preference number: 5 (lower is better) Translates to: LSKLIPDHITSVLLHINLQDGFN*CHLITT Trigger: GGTTGTTATCAAGTGGCACAAGTTAAATCCATCTTG...CAAGTTGATATGCAGAAGAACAGAAGTAATGTGGTCTGGAATTAATTTGCTCAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110047.9 ENSMUST00000162735.8 |
||
| CDS GCA 90 bp | TCTGCTTGGCAAACATTGGAACCTTCTTTGGCTGAAGATTTGAAATaGACTGGTTTGGACAATGTTAAAATTCCTTTTATAGAAATTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SAWQTLEPSLAEDLK*TGLDNVKIPFIEIV Trigger: CACAATTTCTATAAAAGGAATTTTAACATTGTCCAAACCAGTGCATTTCAAATCTTCAGCCAAAGAAGGTTCCAATGTTTGCCAAGCAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160715.8 |
||
| CDS TCA 72 bp | AGATGCTCTAGCAGATCCTTCCAGTTCATCCAGATGTaGAGGAATTCCTTGTGTCCTAGGCTGAATATAAGA | + |
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Preference number: 6 (lower is better) Translates to: RCSSRSFQFIQM*RNSLCPRLNIR Trigger: TCTTATATTCAGCCTAGGACACAAGGAATTCCTTCACATCTGGATGAACTGGAAGGATCTGCTAGAGCATCT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110047.9 ENSMUST00000160715.8 ENSMUST00000160830.2 ENSMUST00000162735.8 |
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| CDS GCA 72 bp | TGCCTCAAGAATTTGCAGCTGAATCCTGCTATTTACTaGTTGAAAACAAGTCCCCAGTTCAAGTTCTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: CLKNLQLNPAIY*LKTSPQFKFCL Trigger: CAAGCAGAACTTGAACTGGGGACTTGTTTTCAAGCAGTAAATAGCAGGATTCAGCTGCAAATTCTTGAGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000110047.9 ENSMUST00000160715.8 ENSMUST00000160830.2 ENSMUST00000162735.8 |
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| CDS CAA 72 bp | CTCAAGAATTTGCAGCTGAATCCTGCTATTTACTGCTaGAAAACAAGTCCCCAGTTCAAGTTCTGCTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: LKNLQLNPAIYC*KTSPQFKFCLA Trigger: TGCCAAGCAGAACTTGAACTGGGGACTTGTTTTCAAGCAGTAAATAGCAGGATTCAGCTGCAAATTCTTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000110047.9 ENSMUST00000160715.8 ENSMUST00000160830.2 ENSMUST00000162735.8 |
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| CDS CAA 90 bp | GTATTGTGCCTCAAGAATTTGCAGCTGAATCCTGCTATTTACTGCTaGAAAACAAGTCCCCAGTTCAAGTTCTGCTTGGCAAACATTGGA | + |
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Preference number: 6 (lower is better) Translates to: VLCLKNLQLNPAIYC*KTSPQFKFCLANIG Trigger: TCCAATGTTTGCCAAGCAGAACTTGAACTGGGGACTTGTTTTCAAGCAGTAAATAGCAGGATTCAGCTGCAAATTCTTGAGGCACAATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160715.8 |
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| CDS CCA 72 bp | GAAGGTGCTATTATTTCCAACGAGTACTCCATTTCCTaGGTACTAAGAGTTCTGAGTGAAAGAGAACACTCT | + |
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Preference number: 6 (lower is better) Translates to: EGAIISNEYSIS*VLRVLSEREHS Trigger: AGAGTGTTCTCTTTCACTCAGAACTCTTAGTACCCAGGAAATGGAGTACTCGTTGGAAATAATAGCACCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110047.9 ENSMUST00000160830.2 ENSMUST00000162735.8 |
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| CDS CAA 72 bp | ACACTCTCCAATGGTTTTCTTCTTGGGAGTCTGGGTTaGAATCTTAAATGCAAGTCTCACAGCTTGGAGATT | + |
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Preference number: 6 (lower is better) Translates to: TLSNGFLLGSLG*NLKCKSHSLEI Trigger: AATCTCCAAGCTGTGAGACTTGCATTTAAGATTCAAACCCAGACTCCCAAGAAGAAAACCATTGGAGAGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110047.9 ENSMUST00000160830.2 ENSMUST00000162735.8 |
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| CDS CAA 90 bp | GTATTGTGCCTCAAGAATTTGCAGCTGAATCCTGCTATTTACTGCTaGAAAACAAGTCCCCAGTTCAAGTTCTGCTTGGCAAACAGAAAT | + |
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Preference number: 6 (lower is better) Translates to: VLCLKNLQLNPAIYC*KTSPQFKFCLANRN Trigger: ATTTCTGTTTGCCAAGCAGAACTTGAACTGGGGACTTGTTTTCAAGCAGTAAATAGCAGGATTCAGCTGCAAATTCTTGAGGCACAATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110047.9 ENSMUST00000160830.2 ENSMUST00000162735.8 |
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| CDS TCA 72 bp | ACACTGGAAAATGAGTCATGTCTCTGGATGAATCGCTaGGATGAAGTTGTAAGATCAAGCATAGATTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: TLENESCLWMNR*DEVVRSSIDLL Trigger: AAGCAAATCTATGCTTGATCTTACAACTTCATCTCAGCGATTCATCCAGAGACATGACTCATTTTCCAGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110047.9 ENSMUST00000160715.8 ENSMUST00000160830.2 ENSMUST00000162735.8 |
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| CDS CAA 72 bp | GCTTGGCAAACATTGGAACCTTCTTTGGCTGAAGATTaGAAATGCACTGGTTTGGACAATGTTAAAATTCCT | + |
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Preference number: 6 (lower is better) Translates to: AWQTLEPSLAED*KCTGLDNVKIP Trigger: AGGAATTTTAACATTGTCCAAACCAGTGCATTTCAAATCTTCAGCCAAAGAAGGTTCCAATGTTTGCCAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160715.8 |
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| CDS CAA 90 bp | CCACTTGATAACAACCTTTTCCGGATTTGTAATGGTCTCTTTCCATaGATTCACTGCTTCAATATTATTACTGTCTTCACTTATCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: PLDNNLFRICNGLFP*IHCFNIITVFTYPE Trigger: CTCTGGATAAGTGAAGACAGTAATAATATTGAAGCAGTGAATCAATGGAAAGAGACCATTACAAATCCGGAAAAGGTTGTTATCAAGTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110047.9 ENSMUST00000160715.8 ENSMUST00000160830.2 ENSMUST00000162735.8 |
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| CDS CAA 90 bp | GAAGTTTACTGGTCCTTAAATCACAAACAGATCCATATAACTGTTTaGTTTCACAATGAGGAAGAAAGCGCCTACTTAAATCAGGTGAAA | + |
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Preference number: 6 (lower is better) Translates to: EVYWSLNHKQIHITV*FHNEEESAYLNQVK Trigger: TTTCACCTGATTTAAGTAGGCGCTTTCTTCCTCATTGTGAAACAAAACAGTTATATGGATCTGTTTGTGATTTAAGGACCAGTAAACTTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110047.9 ENSMUST00000160715.8 ENSMUST00000160830.2 ENSMUST00000162735.8 |
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| CDS GCA 72 bp | TTCCGGATTTGTAATGGTCTCTTTCCATTGATTCACTaGTTCAATATTATTACTGTCTTCACTTATCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: FRICNGLFPLIH*FNIITVFTYPE Trigger: CTCTGGATAAGTGAAGACAGTAATAATATTGAAGCAGTGAATCAATGGAAAGAGACCATTACAAATCCGGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110047.9 ENSMUST00000160715.8 ENSMUST00000160830.2 ENSMUST00000162735.8 |
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| CDS CAA 72 bp | TGGTCCTTAAATCACAAACAGATCCATATAACTGTTTaGTTTCACAATGAGGAAGAAAGCGCCTACTTAAAT | + |
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Preference number: 6 (lower is better) Translates to: WSLNHKQIHITV*FHNEEESAYLN Trigger: ATTTAAGTAGGCGCTTTCTTCCTCATTGTGAAACAAAACAGTTATATGGATCTGTTTGTGATTTAAGGACCA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110047.9 ENSMUST00000160715.8 ENSMUST00000160830.2 ENSMUST00000162735.8 |
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| CDS CAA 72 bp | AATTCAATAGCATTGGAACCTTCTTTGGCTGAAGATTaGAAATGCACTGGTTTGGACAATGTTAAAATTCCT | + |
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Preference number: 6 (lower is better) Translates to: NSIALEPSLAED*KCTGLDNVKIP Trigger: AGGAATTTTAACATTGTCCAAACCAGTGCATTTCAAATCTTCAGCCAAAGAAGGTTCCAATGCTATTGAATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110047.9 ENSMUST00000160830.2 ENSMUST00000162735.8 |
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