Pregenerated sensors for TBXAS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029925Ensembl transcript IDs: ENSMUST00000003017.13, ENSMUST00000160963.2, ENSMUST00000162521.8
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCACTAAAGAGGGGCTGGAGAGATGGCTCAGCACCTGAGAGCATTTaGTGTTCTTGCAGAGGACCTGGACGTAGTCCTCAGCACCCACAT | + |
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Preference number: 1 (lower is better) Translates to: ALKRGWRDGSAPESI*CSCRGPGRSPQHPH Trigger: ATGTGGGTGCTGAGGACTACGTCCAGGTCCTCTGCAAGAACAGCAAATGCTCTCAGGTGCTGAGCCATCTCTCCAGCCCCTCTTTAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162521.8 |
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| 3UTR GCA 90 bp | AGGGGCTGGAGAGATGGCTCAGCACCTGAGAGCATTTGCTGTTCTTaGAGAGGACCTGGACGTAGTCCTCAGCACCCACATTTGGCTTAT | + |
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Preference number: 1 (lower is better) Translates to: RGWRDGSAPESICCS*RGPGRSPQHPHLAY Trigger: ATAAGCCAAATGTGGGTGCTGAGGACTACGTCCAGGTCCTCTGCAAGAACAGCAAATGCTCTCAGGTGCTGAGCCATCTCTCCAGCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162521.8 |
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| 3UTR GCA 90 bp | ACACGAGGCTTTCATCTGAATCCCGGGTGCCCTCCTGCAGCGATGTaGAGATGTTACCATTACAAAGTGCTTCCTCTTTCCCACGTGCCT | + |
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Preference number: 1 (lower is better) Translates to: TRGFHLNPGCPPAAM*RCYHYKVLPLSHVP Trigger: AGGCACGTGGGAAAGAGGAAGCACTTTGTAATGGTAACATCTGCACATCGCTGCAGGAGGGCACCCGGGATTCAGATGAAAGCCTCGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| 3UTR GCA 90 bp | CTCCATCTCCACACGAGGCTTTCATCTGAATCCCGGGTGCCCTCCTaGAGCGATGTGCAGATGTTACCATTACAAAGTGCTTCCTCTTTC | + |
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Preference number: 1 (lower is better) Translates to: LHLHTRLSSESRVPS*SDVQMLPLQSASSF Trigger: GAAAGAGGAAGCACTTTGTAATGGTAACATCTGCACATCGCTGCAGGAGGGCACCCGGGATTCAGATGAAAGCCTCGTGTGGAGATGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| 3UTR CCA 90 bp | ATAACCACCTGTAACTCCAGTTCTAGAGGAGCCAATGCGCTCTTCTaGCCTCAGTCAGCTCCTGCATGCATGTGGTACACATACACTCAT | + |
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Preference number: 1 (lower is better) Translates to: ITTCNSSSRGANALF*PQSAPACMWYTYTH Trigger: ATGAGTGTATGTGTACCACATGCATGCAGGAGCTGACTGAGGCCAGAAGAGCGCATTGGCTCCTCTAGAACTGGAGTTACAGGTGGTTAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162521.8 |
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| 3UTR-3UTR CCA 90 bp | GCACCTGAGAGCATTTGCTGTTCTTGCAGAGGACCTGGACGTAGTCCTCAGCACGCCAATGCGCTCTTCTaGCCTCAGTCAGCTCCTGCA | + |
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Preference number: 2 (lower is better) Translates to: APESICCSCRGPGRSPQHANALF*PQSAPA Trigger: TGCAGGAGCTGACTGAGGCCAGAAGAGCGCATTGGC...GTGCTGAGGACTACGTCCAGGTCCTCTGCAAGAACAGCAAATGCTCTCAGGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162521.8 |
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| 3UTR-3UTR GCA 90 bp | CTGGAGATCCAGAAGTTATTAAAGGTCACCCAGTGGCTGAGGAGGAGCCTCATCACAAGGGTGACCATGTaGCCCAGTGTATCCTGGACA | + |
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Preference number: 2 (lower is better) Translates to: LEIQKLLKVTQWLRRSLITRVTM*PSVSWT Trigger: TGTCCAGGATACACTGGGGCACATGGTCACCCTTGT...GATGAGGCTCCTCCTCAGCCACTGGGTGACCTTTAATAACTTCTGGATCTCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162521.8 |
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| 3UTR TCA 72 bp | AGCACTAAAGAGGGGCTGGAGAGATGGCTCAGCACCTaGGAGCATTTGCTGTTCTTGCAGAGGACCTGGACG | + |
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Preference number: 3 (lower is better) Translates to: STKEGLERWLST*EHLLFLQRTWT Trigger: CGTCCAGGTCCTCTGCAAGAACAGCAAATGCTCTCAGGTGCTGAGCCATCTCTCCAGCCCCTCTTTAGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162521.8 |
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| 3UTR GCA 72 bp | TCCATCTCCACACGAGGCTTTCATCTGAATCCCGGGTaGCCTCCTGCAGCGATGTGCAGATGTTACCATTAC | + |
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Preference number: 3 (lower is better) Translates to: SISTRGFHLNPG*PPAAMCRCYHY Trigger: GTAATGGTAACATCTGCACATCGCTGCAGGAGGGCACCCGGGATTCAGATGAAAGCCTCGTGTGGAGATGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| 3UTR GCA 72 bp | AGAGATGGCTCAGCACCTGAGAGCATTTGCTGTTCTTaGAGAGGACCTGGACGTAGTCCTCAGCACCCACAT | + |
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Preference number: 3 (lower is better) Translates to: RDGSAPESICCS*RGPGRSPQHPH Trigger: ATGTGGGTGCTGAGGACTACGTCCAGGTCCTCTGCAAGAACAGCAAATGCTCTCAGGTGCTGAGCCATCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162521.8 |
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| 3UTR GCA 72 bp | GCCAATGCGCTCTTCTGGCCTCAGTCAGCTCCTGCATaGATGTGGTACACATACACTCATAAGGCTCACACA | + |
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Preference number: 3 (lower is better) Translates to: ANALFWPQSAPA*MWYTYTHKAHT Trigger: TGTGTGAGCCTTATGAGTGTATGTGTACCACATGCATGCAGGAGCTGACTGAGGCCAGAAGAGCGCATTGGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162521.8 |
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| 3UTR CCA 72 bp | TGTAACTCCAGTTCTAGAGGAGCCAATGCGCTCTTCTaGCCTCAGTCAGCTCCTGCATGCATGTGGTACACA | + |
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Preference number: 3 (lower is better) Translates to: CNSSSRGANALF*PQSAPACMWYT Trigger: TGTGTACCACATGCATGCAGGAGCTGACTGAGGCCAGAAGAGCGCATTGGCTCCTCTAGAACTGGAGTTACA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162521.8 |
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| 3UTR TCA 72 bp | AATACCTTTCCAAAGCAGCACCGAGAGAATACAGGTTaGGACCTTCGGAACACAAAGGTTTCCAAACAACGG | + |
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Preference number: 3 (lower is better) Translates to: NTFPKQHRENTG*DLRNTKVSKQR Trigger: CCGTTGTTTGGAAACCTTTGTGTTCCGAAGGTCTCAACCTGTATTCTCTCGGTGCTGCTTTGGAAAGGTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162521.8 |
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| 3UTR GCA 72 bp | TTTAGGAATTGTGACAAAGTAGGCTCACATGCCATGTaGCCTTTTGATCACCCTAAGATATATATTCCTATA | + |
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Preference number: 3 (lower is better) Translates to: FRNCDKVGSHAM*PFDHPKIYIPI Trigger: TATAGGAATATATATCTTAGGGTGATCAAAAGGGCACATGGCATGTGAGCCTACTTTGTCACAATTCCTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR TCA 90 bp | CATCTCCACACGAGGCTTTCATCTGAATCCCGGGTGCCCTCCTGCAGCGATGTGCCTCATGGCCCGCAATaGGGAAGAGGAAGGCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: HLHTRLSSESRVPSCSDVPHGPQ*GRGRPG Trigger: GCCAGGCCTTCCTCTTCCTCATTGCGGGCCATGAGG...CACATCGCTGCAGGAGGGCACCCGGGATTCAGATGAAAGCCTCGTGTGGAGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR GCA 90 bp | CCGGGTGCCCTCCTGCAGCGATGTGCAGATGTTACCATTACAAAGTGCTTCCTCGGGAGTCCACCTGGGTaGCAAAGGCCACACTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: PGALLQRCADVTITKCFLGSPPG*QRPHWP Trigger: TGGCCAGTGTGGCCTTTGGCACCCAGGTGGACTCCC...GAGGAAGCACTTTGTAATGGTAACATCTGCACATCGCTGCAGGAGGGCACCCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR GCA 90 bp | CATCTCCACACGAGGCTTTCATCTGAATCCCGGGTGCCCTCCTGCAGCGATGTGTACTCAGGGGCTGGGTaGTTCCCCATGAAGAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: HLHTRLSSESRVPSCSDVYSGAG*FPMKRS Trigger: GGACCTCTTCATGGGGAAGCACCCAGCCCCTGAGTA...CACATCGCTGCAGGAGGGCACCCGGGATTCAGATGAAAGCCTCGTGTGGAGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR GCA 90 bp | ATCTCCACACGAGGCTTTCATCTGAATCCCGGGTGCCCTCCTGCAGCGATGTGCCTGAAGCCGGGCCTCTaGTGTGAACCTTTCAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: ISTRGFHLNPGCPPAAMCLKPGL*CEPFRV Trigger: GACCCTGAAAGGTTCACAGCAGAGGCCCGGCTTCAG...GCACATCGCTGCAGGAGGGCACCCGGGATTCAGATGAAAGCCTCGTGTGGAGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR CCA 90 bp | CATCTCCACACGAGGCTTTCATCTGAATCCCGGGTGCCCTCCTGCAGCGATGTGCGCCCACAGAGTTCATaGAGTGCTGGGCATCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: HLHTRLSSESRVPSCSDVRPQSS*SAGHPA Trigger: TGCTGGATGCCCAGCACTCCATGAACTCTGTGGGCG...CACATCGCTGCAGGAGGGCACCCGGGATTCAGATGAAAGCCTCGTGTGGAGATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR TCA 90 bp | TCCAGTTCTAGAGGAGCCAATGCGCTCTTCTGGCCTCAGTCAGCTCCTGCATGCAAGGCTTGGGGTGCCTaGTGCCCAACTTCTCCAGTC | + |
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Preference number: 4 (lower is better) Translates to: SSSRGANALFWPQSAPACKAWGA*CPTSPV Trigger: GACTGGAGAAGTTGGGCATCAGGCACCCCAAGCCTT...GCATGCAGGAGCTGACTGAGGCCAGAAGAGCGCATTGGCTCCTCTAGAACTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162521.8 |
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| CDS-3UTR GCA 90 bp | CCCGGGTGCCCTCCTGCAGCGATGTGCAGATGTTACCATTACAAAGTGCTTCCTCACCTCACAGTCCTGTaGTGCCTCCCGTGTGAACCT | + |
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Preference number: 4 (lower is better) Translates to: PGCPPAAMCRCYHYKVLPHLTVL*CLPCEP Trigger: AGGTTCACACGGGAGGCAGCACAGGACTGTGAGGTG...AGGAAGCACTTTGTAATGGTAACATCTGCACATCGCTGCAGGAGGGCACCCGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR CCA 90 bp | CATCTCCACACGAGGCTTTCATCTGAATCCCGGGTGCCCTCCTGCAGCGATGTGATACCAGGAGAGGCCTaGGGATACAGAAGGTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: HLHTRLSSESRVPSCSDVIPGEA*GYRRWK Trigger: CTTCCACCTTCTGTATCCCCAGGCCTCTCCTGGTAT...CACATCGCTGCAGGAGGGCACCCGGGATTCAGATGAAAGCCTCGTGTGGAGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR CCA 90 bp | ATCTCCACACGAGGCTTTCATCTGAATCCCGGGTGCCCTCCTGCAGCGATGTGCGTAGGATGGCACCTTTaGGGTGGTTCCTTTGTGCAC | + |
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Preference number: 4 (lower is better) Translates to: ISTRGFHLNPGCPPAAMCVGWHL*GGSFVH Trigger: GTGCACAAAGGAACCACCCCAAAGGTGCCATCCTAC...GCACATCGCTGCAGGAGGGCACCCGGGATTCAGATGAAAGCCTCGTGTGGAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR CCA 90 bp | CTGCAGCGATGTGCAGATGTTACCATTACAAAGTGCTTCCTCTTTCCCACGTGCCCTTCCTGCAGGCTGTaGTACTCAGGGGCTGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: LQRCADVTITKCFLFPTCPSCRL*YSGAGC Trigger: GCACCCAGCCCCTGAGTACCACAGCCTGCAGGAAGG...GCACGTGGGAAAGAGGAAGCACTTTGTAATGGTAACATCTGCACATCGCTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR TCA 90 bp | ATCTCCACACGAGGCTTTCATCTGAATCCCGGGTGCCCTCCTGCAGCGATGTGCCCAACTTTTCAGGACTaGATGAAGACATCAGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: ISTRGFHLNPGCPPAAMCPTFQD*MKTSGH Trigger: GTGCCCTGATGTCTTCATTCAGTCCTGAAAAGTTGG...GCACATCGCTGCAGGAGGGCACCCGGGATTCAGATGAAAGCCTCGTGTGGAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR GCA 90 bp | CTGGAGATCCAGAAGTTATTAAAGGTCACCCAGTGGCTGAGGAGGAGCCTCATCGGAGAAGGCTTGGGGTaGCTGATGCCCAACTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: LEIQKLLKVTQWLRRSLIGEGLG*LMPNFS Trigger: GGAGAAGTTGGGCATCAGGCACCCCAAGCCTTCTCC...GATGAGGCTCCTCCTCAGCCACTGGGTGACCTTTAATAACTTCTGGATCTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162521.8 |
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| CDS-3UTR GCA 90 bp | CCGGGTGCCCTCCTGCAGCGATGTGCAGATGTTACCATTACAAAGTGCTTCCTCCTCTCTTCTGCTGCTTaGTGGTCCCGTAAGGCAATC | + |
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Preference number: 4 (lower is better) Translates to: PGALLQRCADVTITKCFLLSSAA*WSRKAI Trigger: GATTGCCTTACGGGACCAGCAAGCAGCAGAAGAGAG...GAGGAAGCACTTTGTAATGGTAACATCTGCACATCGCTGCAGGAGGGCACCCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR CCA 90 bp | CATCTCCACACGAGGCTTTCATCTGAATCCCGGGTGCCCTCCTGCAGCGATGTGCACAAAGGGATCTTCTaGAGAATTCTGGGAGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: HLHTRLSSESRVPSCSDVHKGIF*RILGVH Trigger: GTGGACTCCCAGAATTCTCCAGAAGATCCCTTTGTG...CACATCGCTGCAGGAGGGCACCCGGGATTCAGATGAAAGCCTCGTGTGGAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR CCA 90 bp | CTGCAGCGATGTGCAGATGTTACCATTACAAAGTGCTTCCTCTTTCCCACGTGCTCCTGGCAGTCAGGGTaGGTGGCCAGCAGGTATGTG | + |
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Preference number: 4 (lower is better) Translates to: LQRCADVTITKCFLFPTCSWQSG*VASRYV Trigger: CACATACCTGCTGGCCACCCACCCTGACTGCCAGGA...GCACGTGGGAAAGAGGAAGCACTTTGTAATGGTAACATCTGCACATCGCTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR GCA 90 bp | GGTGCCCTCCTGCAGCGATGTGCAGATGTTACCATTACAAAGTGCTTCCTCTTTGGAGAAGGCTTGGGGTaGCTGATGCCCAACTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: GALLQRCADVTITKCFLFGEGLG*LMPNFS Trigger: GGAGAAGTTGGGCATCAGGCACCCCAAGCCTTCTCC...AAAGAGGAAGCACTTTGTAATGGTAACATCTGCACATCGCTGCAGGAGGGCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR GCA 90 bp | CTGCAGCGATGTGCAGATGTTACCATTACAAAGTGCTTCCTCTTTCCCACGTGCTACGGCAGACCTTCCTaGAGGCTGTGGTACTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: LQRCADVTITKCFLFPTCYGRPS*RLWYSG Trigger: CCCTGAGTACCACAGCCTGCAGGAAGGTCTGCCGTA...GCACGTGGGAAAGAGGAAGCACTTTGTAATGGTAACATCTGCACATCGCTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR CCA 90 bp | GCACCTGAGAGCATTTGCTGTTCTTGCAGAGGACCTGGACGTAGTCCTCAGCACTCTCGGAGTTCCAATTaGCTCTCCCAAAAACCCTGG | + |
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Preference number: 4 (lower is better) Translates to: APESICCSCRGPGRSPQHSRSSN*LSQKPW Trigger: CCAGGGTTTTTGGGAGAGCCAATTGGAACTCCGAGA...GTGCTGAGGACTACGTCCAGGTCCTCTGCAAGAACAGCAAATGCTCTCAGGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162521.8 |
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| CDS-3UTR CCA 90 bp | CCCGGGTGCCCTCCTGCAGCGATGTGCAGATGTTACCATTACAAAGTGCTTCCTATGGCACCTTTGGGGTaGTTCCTTTGTGCACTCAGA | + |
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Preference number: 4 (lower is better) Translates to: PGCPPAAMCRCYHYKVLPMAPLG*FLCALR Trigger: TCTGAGTGCACAAAGGAACCACCCCAAAGGTGCCAT...AGGAAGCACTTTGTAATGGTAACATCTGCACATCGCTGCAGGAGGGCACCCGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR TCA 90 bp | GGTGCCCTCCTGCAGCGATGTGCAGATGTTACCATTACAAAGTGCTTCCTCTTTTGTCTGGCTCTGAAATaGCAACGTGCATCCGACGGC | + |
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Preference number: 4 (lower is better) Translates to: GALLQRCADVTITKCFLFCLALK*QRASDG Trigger: GCCGTCGGATGCACGTTGTCATTTCAGAGCCAGACA...AAAGAGGAAGCACTTTGTAATGGTAACATCTGCACATCGCTGCAGGAGGGCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR TCA 90 bp | GATCACCCTAAGATATATATTCCTATAAACTCTCCATCTCCACACGAGGCTTTCGTGAACGGCCTCCGCTaGAGCCGGGCCTCTGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: DHPKIYIPINSPSPHEAFVNGLR*SRASAV Trigger: CACAGCAGAGGCCCGGCTTCAGCGGAGGCCGTTCAC...GAAAGCCTCGTGTGGAGATGGAGAGTTTATAGGAATATATATCTTAGGGTGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR GCA 90 bp | CTGCAGCGATGTGCAGATGTTACCATTACAAAGTGCTTCCTCTTTCCCACGTGCCTCACAGTCCTGTGCTaGCTCCCGTGTGAACCTGAA | + |
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Preference number: 4 (lower is better) Translates to: LQRCADVTITKCFLFPTCLTVLC*LPCEPE Trigger: TTCAGGTTCACACGGGAGGCAGCACAGGACTGTGAG...GCACGTGGGAAAGAGGAAGCACTTTGTAATGGTAACATCTGCACATCGCTGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR CCA 90 bp | CCGGGTGCCCTCCTGCAGCGATGTGCAGATGTTACCATTACAAAGTGCTTCCTCAGAAGTTCACAGGCTTaGCTGATGAGAGGTGTCATC | + |
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Preference number: 4 (lower is better) Translates to: PGALLQRCADVTITKCFLRSSQA*LMRGVI Trigger: GATGACACCTCTCATCAGCCAAGCCTGTGAACTTCT...GAGGAAGCACTTTGTAATGGTAACATCTGCACATCGCTGCAGGAGGGCACCCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR CCA 90 bp | GGTGCCCTCCTGCAGCGATGTGCAGATGTTACCATTACAAAGTGCTTCCTCTTTGAGTTCATGGAGTGCTaGGCATCCAGCACCATCTGC | + |
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Preference number: 4 (lower is better) Translates to: GALLQRCADVTITKCFLFEFMEC*ASSTIC Trigger: GCAGATGGTGCTGGATGCCCAGCACTCCATGAACTC...AAAGAGGAAGCACTTTGTAATGGTAACATCTGCACATCGCTGCAGGAGGGCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR CCA 90 bp | CCCGGGTGCCCTCCTGCAGCGATGTGCAGATGTTACCATTACAAAGTGCTTCCTTTGAGAAAGCTGACATaGAGTACCATTTCAGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: PGCPPAAMCRCYHYKVLPLRKLT*STISGG Trigger: CCCTCCTGAAATGGTACTCCATGTCAGCTTTCTCAA...AGGAAGCACTTTGTAATGGTAACATCTGCACATCGCTGCAGGAGGGCACCCGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR CCA 90 bp | TGCAGCGATGTGCAGATGTTACCATTACAAAGTGCTTCCTCTTTCCCACGTGCCTCTTCTGGAGAATTCTaGGAGTCCACCTGGGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: CSDVQMLPLQSASSFPRASSGEF*ESTWVP Trigger: TGGCACCCAGGTGGACTCCCAGAATTCTCCAGAAGA...GGCACGTGGGAAAGAGGAAGCACTTTGTAATGGTAACATCTGCACATCGCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR CCA 90 bp | CTGCAGCGATGTGCAGATGTTACCATTACAAAGTGCTTCCTCTTTCCCACGTGCGAACCTGAAAGCTGGTaGGTACATCCTCAGGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: LQRCADVTITKCFLFPTCEPESW*VHPQGL Trigger: GAGACCCTGAGGATGTACCCACCAGCTTTCAGGTTC...GCACGTGGGAAAGAGGAAGCACTTTGTAATGGTAACATCTGCACATCGCTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR CCA 90 bp | CTGCAGCGATGTGCAGATGTTACCATTACAAAGTGCTTCCTCTTTCCCACGTGCTCTCGGAGTTCCAATTaGCTCTCCCAAAAACCCTGG | + |
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Preference number: 4 (lower is better) Translates to: LQRCADVTITKCFLFPTCSRSSN*LSQKPW Trigger: CCAGGGTTTTTGGGAGAGCCAATTGGAACTCCGAGA...GCACGTGGGAAAGAGGAAGCACTTTGTAATGGTAACATCTGCACATCGCTGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR CCA 90 bp | CTGCAGCGATGTGCAGATGTTACCATTACAAAGTGCTTCCTCTTTCCCACGTGCCATCTCGGTTCTTATTaGGCAGAATCCGGGCCAATG | + |
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Preference number: 4 (lower is better) Translates to: LQRCADVTITKCFLFPTCHLGSY*AESGPM Trigger: CATTGGCCCGGATTCTGCCCAATAAGAACCGAGATG...GCACGTGGGAAAGAGGAAGCACTTTGTAATGGTAACATCTGCACATCGCTGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR TCA 90 bp | TGCAGCGATGTGCAGATGTTACCATTACAAAGTGCTTCCTCTTTCCCACGTGCCCATCCTCAGGGTCTCTaGAATCACCATGTCCAGATA | + |
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Preference number: 4 (lower is better) Translates to: CSDVQMLPLQSASSFPRAHPQGL*NHHVQI Trigger: TATCTGGACATGGTGATTTCAGAGACCCTGAGGATG...GGCACGTGGGAAAGAGGAAGCACTTTGTAATGGTAACATCTGCACATCGCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR TCA 90 bp | GTAGGCTCACATGCCATGTGCCCTTTTGATCACCCTAAGATATATATTCCTATAGGAGTATTGTCAGCTTaGCCACCAGCAGGCCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: VGSHAMCPFDHPKIYIPIGVLSA*PPAGPA Trigger: GGCTGGGCCTGCTGGTGGTCAAGCTGACAATACTCC...TATAGGAATATATATCTTAGGGTGATCAAAAGGGCACATGGCATGTGAGCCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR CCA 90 bp | CTGGAGATCCAGAAGTTATTAAAGGTCACCCAGTGGCTGAGGAGGAGCCTCATCTTGAGAAAGCTGACATaGAGTACCATTTCAGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: LEIQKLLKVTQWLRRSLILRKLT*STISGG Trigger: CCCTCCTGAAATGGTACTCCATGTCAGCTTTCTCAA...GATGAGGCTCCTCCTCAGCCACTGGGTGACCTTTAATAACTTCTGGATCTCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162521.8 |
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| CDS-3UTR CCA 90 bp | ATCTCCACACGAGGCTTTCATCTGAATCCCGGGTGCCCTCCTGCAGCGATGTGCCCAATGGGACCATTATaGATGGAAATGATAAGATTA | + |
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Preference number: 4 (lower is better) Translates to: ISTRGFHLNPGCPPAAMCPMGPL*MEMIRL Trigger: TAATCTTATCATTTCCATCCATAATGGTCCCATTGG...GCACATCGCTGCAGGAGGGCACCCGGGATTCAGATGAAAGCCTCGTGTGGAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR CCA 90 bp | CTGCAGCGATGTGCAGATGTTACCATTACAAAGTGCTTCCTCTTTCCCACGTGCCAGAATCCGGGCCAATaGGACCATTATGGATGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LQRCADVTITKCFLFPTCQNPGQ*DHYGWK Trigger: TTTCCATCCATAATGGTCCCATTGGCCCGGATTCTG...GCACGTGGGAAAGAGGAAGCACTTTGTAATGGTAACATCTGCACATCGCTGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR CCA 90 bp | GCGATGTGCAGATGTTACCATTACAAAGTGCTTCCTCTTTCCCACGTGCCTTCTAGAGGACAGGGATTCTaGGACCATGTCAAAGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AMCRCYHYKVLPLSHVPSRGQGF*DHVKAF Trigger: GAAGGCTTTGACATGGTCCCAGAATCCCTGTCCTCT...AGAAGGCACGTGGGAAAGAGGAAGCACTTTGTAATGGTAACATCTGCACATCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR CCA 90 bp | GGCTCACATGCCATGTGCCCTTTTGATCACCCTAAGATATATATTCCTATAAACTTCAGAAGCCTCTCCTaGCAGTCAGGGTGGGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GSHAMCPFDHPKIYIPINFRSLS*QSGWVA Trigger: GGCCACCCACCCTGACTGCCAGGAGAGGCTTCTGAA...GTTTATAGGAATATATATCTTAGGGTGATCAAAAGGGCACATGGCATGTGAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR CCA 90 bp | TGCAGCGATGTGCAGATGTTACCATTACAAAGTGCTTCCTCTTTCCCACGTGCCGGCCTAGGGCAGATTTaGATTCTAGCTGAAGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CSDVQMLPLQSASSFPRAGLGQI*ILAEVE Trigger: TTCCACTTCAGCTAGAATCCAAATCTGCCCTAGGCC...GGCACGTGGGAAAGAGGAAGCACTTTGTAATGGTAACATCTGCACATCGCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR TCA 90 bp | CACCCTAAGATATATATTCCTATAAACTCTCCATCTCCACACGAGGCTTTCATCAAGGCTTGGGGTGCCTaGTGCCCAACTTCTCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: HPKIYIPINSPSPHEAFIKAWGA*CPTSPV Trigger: GACTGGAGAAGTTGGGCATCAGGCACCCCAAGCCTT...GATGAAAGCCTCGTGTGGAGATGGAGAGTTTATAGGAATATATATCTTAGGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR GCA 90 bp | GTAGGCTCACATGCCATGTGCCCTTTTGATCACCCTAAGATATATATTCCTATAGCATCCAGCACCATCTaGAGGAAGTCTCTCCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VGSHAMCPFDHPKIYIPIASSTI*RKSLRL Trigger: GAGGCGGAGAGACTTCCTGCAGATGGTGCTGGATGC...TATAGGAATATATATCTTAGGGTGATCAAAAGGGCACATGGCATGTGAGCCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR CCA 90 bp | CACCCTAAGATATATATTCCTATAAACTCTCCATCTCCACACGAGGCTTTCATCCAGTGCTCTGGGTCATaGTGTAGGGCACCCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HPKIYIPINSPSPHEAFIQCSGS*CRAPTA Trigger: AGCTGTGGGTGCCCTACACCATGACCCAGAGCACTG...GATGAAAGCCTCGTGTGGAGATGGAGAGTTTATAGGAATATATATCTTAGGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR TCA 90 bp | GATGTGCAGATGTTACCATTACAAAGTGCTTCCTCTTTCCCACGTGCCTTCTATCTTTTCAGGACTGAATaGAGACATCAGGGCACCCCT | + |
|
Preference number: 4 (lower is better) Translates to: DVQMLPLQSASSFPRAFYLFRTE*RHQGTP Trigger: AGGGGTGCCCTGATGTCTTCATTCAGTCCTGAAAAG...ATAGAAGGCACGTGGGAAAGAGGAAGCACTTTGTAATGGTAACATCTGCACATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR TCA 90 bp | GTAGGCTCACATGCCATGTGCCCTTTTGATCACCCTAAGATATATATTCCTATACTGGGTGCTTCCCCATaGAGAGGTCCACCTCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VGSHAMCPFDHPKIYIPILGASP*RGPPLS Trigger: TGAAAGAGGTGGACCTCTTCATGGGGAAGCACCCAG...TATAGGAATATATATCTTAGGGTGATCAAAAGGGCACATGGCATGTGAGCCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR TCA 90 bp | CTGCAGCGATGTGCAGATGTTACCATTACAAAGTGCTTCCTCTTTCCCACGTGCAGCGTGACACAATCTTaGTGTAGACTCCATTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LQRCADVTITKCFLFPTCSVTQS*CRLHFW Trigger: CCAAAAATGGAGTCTACATCAAGATTGTGTCACGCT...GCACGTGGGAAAGAGGAAGCACTTTGTAATGGTAACATCTGCACATCGCTGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR GCA 90 bp | GATCACCCTAAGATATATATTCCTATAAACTCTCCATCTCCACACGAGGCTTTCGGGGTGGTTCCTTTGTaGACTCAGAAGAGGACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: DHPKIYIPINSPSPHEAFGVVPL*TQKRTG Trigger: CCCTGTCCTCTTCTGAGTGCACAAAGGAACCACCCC...GAAAGCCTCGTGTGGAGATGGAGAGTTTATAGGAATATATATCTTAGGGTGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR CCA 90 bp | GATGTGCAGATGTTACCATTACAAAGTGCTTCCTCTTTCCCACGTGCCTTCTATTCTTCTGCTGCTTGCTaGTCCCGTAAGGCAATCACA | + |
|
Preference number: 4 (lower is better) Translates to: DVQMLPLQSASSFPRAFYSSAAC*SRKAIT Trigger: TGTGATTGCCTTACGGGACCAGCAAGCAGCAGAAGA...ATAGAAGGCACGTGGGAAAGAGGAAGCACTTTGTAATGGTAACATCTGCACATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR CCA 90 bp | GATGTGCAGATGTTACCATTACAAAGTGCTTCCTCTTTCCCACGTGCCTTCTATTGTGAACCTGAAAGCTaGTGGGTACATCCTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: DVQMLPLQSASSFPRAFYCEPES*WVHPQG Trigger: ACCCTGAGGATGTACCCACCAGCTTTCAGGTTCACA...ATAGAAGGCACGTGGGAAAGAGGAAGCACTTTGTAATGGTAACATCTGCACATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR TCA 90 bp | GATGTGCAGATGTTACCATTACAAAGTGCTTCCTCTTTCCCACGTGCCTTCTATCAACCAACACCTGCTTaGTCATGTCTGGCTCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: DVQMLPLQSASSFPRAFYQPTPA*SCLALK Trigger: TTTCAGAGCCAGACATGATCAAGCAGGTGTTGGTTG...ATAGAAGGCACGTGGGAAAGAGGAAGCACTTTGTAATGGTAACATCTGCACATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR TCA 90 bp | GGCTCACATGCCATGTGCCCTTTTGATCACCCTAAGATATATATTCCTATAAACAACACCTCTGGATGTTaGATGCGTCCCTGGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSHAMCPFDHPKIYIPINNTSGC*MRPWML Trigger: CAGCATCCAGGGACGCATTCAACATCCAGAGGTGTT...GTTTATAGGAATATATATCTTAGGGTGATCAAAAGGGCACATGGCATGTGAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| 3UTR CAA 72 bp | CAATACCTTTCCAAAGCAGCACCGAGAGAATACAGGTaGAGACCTTCGGAACACAAAGGTTTCCAAACAACG | + |
|
Preference number: 4 (lower is better) Translates to: QYLSKAAPREYR*RPSEHKGFQTT Trigger: CGTTGTTTGGAAACCTTTGTGTTCCGAAGGTCTCAACCTGTATTCTCTCGGTGCTGCTTTGGAAAGGTATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162521.8 |
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| CDS-3UTR TCA 90 bp | GTAGGCTCACATGCCATGTGCCCTTTTGATCACCCTAAGATATATATTCCTATACTTGGGTTCCAGACCTaGGGCCATTCTGTTGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: VGSHAMCPFDHPKIYIPILGFQT*GHSVGK Trigger: TTTTCCAACAGAATGGCCTCAGGTCTGGAACCCAAG...TATAGGAATATATATCTTAGGGTGATCAAAAGGGCACATGGCATGTGAGCCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR CCA 90 bp | GTAGGCTCACATGCCATGTGCCCTTTTGATCACCCTAAGATATATATTCCTATATGGCCACCACATCTATaGTGTAACAGCAGTAACACC | + |
|
Preference number: 4 (lower is better) Translates to: VGSHAMCPFDHPKIYIPIWPPHL*CNSSNT Trigger: GGTGTTACTGCTGTTACACCATAGATGTGGTGGCCA...TATAGGAATATATATCTTAGGGTGATCAAAAGGGCACATGGCATGTGAGCCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR CCA 90 bp | CACCCTAAGATATATATTCCTATAAACTCTCCATCTCCACACGAGGCTTTCATCTGTAGACTCCATTTTTaGGGCCTAGGGCAGATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HPKIYIPINSPSPHEAFICRLHF*GLGQIW Trigger: CCAAATCTGCCCTAGGCCCCAAAAATGGAGTCTACA...GATGAAAGCCTCGTGTGGAGATGGAGAGTTTATAGGAATATATATCTTAGGGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR GCA 90 bp | GACAAAGTAGGCTCACATGCCATGTGCCCTTTTGATCACCCTAAGATATATATTTTCTCAACCAACACCTaGTTGATCATGTCTGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: DKVGSHAMCPFDHPKIYIFSTNT*LIMSGS Trigger: AGAGCCAGACATGATCAAGCAGGTGTTGGTTGAGAA...AATATATATCTTAGGGTGATCAAAAGGGCACATGGCATGTGAGCCTACTTTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS TCA 90 bp | CTCCTGGGGCCAGCTCCAAAGGGCAGGTATGTGAACGGCCTCCGCTaGAGCCGGGCCTCTGCTGTGAACCTTTCAGGGTCAAAGGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LLGPAPKGRYVNGLR*SRASAVNLSGSKVS Trigger: TGAGACCTTTGACCCTGAAAGGTTCACAGCAGAGGCCCGGCTTCAGCGGAGGCCGTTCACATACCTGCCCTTTGGAGCTGGCCCCAGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS TCA 90 bp | TGGCTTCAAAGCGGAACTTGTGTAGGACCTGGAGTATTGTCAGCTTaGCCACCAGCAGGCCCAGCCGCACTCCGAGGCAGCTCCTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: WLQSGTCVGPGVLSA*PPAGPAALRGSSWG Trigger: GCCCCAGGAGCTGCCTCGGAGTGCGGCTGGGCCTGCTGGTGGTCAAGCTGACAATACTCCAGGTCCTACACAAGTTCCGCTTTGAAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS GCA 90 bp | TCCACGCCCACAGAGTTCATGGAGTGCTGGGCATCCAGCACCATCTaGAGGAAGTCTCTCCGCCTCTCTTCTGCTGCTTGCTGGTCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: STPTEFMECWASSTI*RKSLRLSSAACWSR Trigger: ACGGGACCAGCAAGCAGCAGAAGAGAGGCGGAGAGACTTCCTGCAGATGGTGCTGGATGCCCAGCACTCCATGAACTCTGTGGGCGTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS CCA 90 bp | GGGATTCTGGGACCATGTCAAAGCCTTCCACGCCCACAGAGTTCATaGAGTGCTGGGCATCCAGCACCATCTGCAGGAAGTCTCTCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: GILGPCQSLPRPQSS*SAGHPAPSAGSLSA Trigger: GGCGGAGAGACTTCCTGCAGATGGTGCTGGATGCCCAGCACTCCATGAACTCTGTGGGCGTGGAAGGCTTTGACATGGTCCCAGAATCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS CCA 90 bp | GTCCAGATACGGCAGACCTTCCTGCAGGCTGTGGTACTCAGGGGCTaGGTGCTTCCCCATGAAGAGGTCCACCTCTTTCAGAAGCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: VQIRQTFLQAVVLRG*VLPHEEVHLFQKPL Trigger: GAGAGGCTTCTGAAAGAGGTGGACCTCTTCATGGGGAAGCACCCAGCCCCTGAGTACCACAGCCTGCAGGAAGGTCTGCCGTATCTGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS GCA 90 bp | AGGAGAGGCCTGGGGATACAGAAGGTGGAAGCACGCCGGCAGTGTTaGACAAAGGGATCTTCTGGAGAATTCTGGGAGTCCACCTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RRGLGIQKVEARRQC*TKGSSGEFWESTWV Trigger: CACCCAGGTGGACTCCCAGAATTCTCCAGAAGATCCCTTTGTGCAACACTGCCGGCGTGCTTCCACCTTCTGTATCCCCAGGCCTCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS GCA 90 bp | TCTGGGACCATGTCAAAGCCTTCCACGCCCACAGAGTTCATGGAGTaGTGGGCATCCAGCACCATCTGCAGGAAGTCTCTCCGCCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SGTMSKPSTPTEFME*WASSTICRKSLRLS Trigger: AGAGAGGCGGAGAGACTTCCTGCAGATGGTGCTGGATGCCCAGCACTCCATGAACTCTGTGGGCGTGGAAGGCTTTGACATGGTCCCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS CCA 90 bp | GAAGCACGCCGGCAGTGTTGCACAAAGGGATCTTCTGGAGAATTCTaGGAGTCCACCTGGGTGCCAAAGGCCACACTGGCCACCACATCT | + |
|
Preference number: 5 (lower is better) Translates to: EARRQCCTKGSSGEF*ESTWVPKATLATTS Trigger: AGATGTGGTGGCCAGTGTGGCCTTTGGCACCCAGGTGGACTCCCAGAATTCTCCAGAAGATCCCTTTGTGCAACACTGCCGGCGTGCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS CCA 90 bp | GGGACCATGTCAAAGCCTTCCACGCCCACAGAGTTCATGGAGTGCTaGGCATCCAGCACCATCTGCAGGAAGTCTCTCCGCCTCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GTMSKPSTPTEFMEC*ASSTICRKSLRLSS Trigger: AGAAGAGAGGCGGAGAGACTTCCTGCAGATGGTGCTGGATGCCCAGCACTCCATGAACTCTGTGGGCGTGGAAGGCTTTGACATGGTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS CCA 90 bp | CTTTCAGGGTCAAAGGTCTCAGGATTCGGCCAGTGCTCTGGGTCATaGTGTAGGGCACCCACAGCTATCTCCAGCACTGTACCTGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LSGSKVSGFGQCSGS*CRAPTAISSTVPAG Trigger: CCCTGCAGGTACAGTGCTGGAGATAGCTGTGGGTGCCCTACACCATGACCCAGAGCACTGGCCGAATCCTGAGACCTTTGACCCTGAAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS CCA 90 bp | TCTGAAATCACCATGTCCAGATACGGCAGACCTTCCTGCAGGCTGTaGTACTCAGGGGCTGGGTGCTTCCCCATGAAGAGGTCCACCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SEITMSRYGRPSCRL*YSGAGCFPMKRSTS Trigger: AGAGGTGGACCTCTTCATGGGGAAGCACCCAGCCCCTGAGTACCACAGCCTGCAGGAAGGTCTGCCGTATCTGGACATGGTGATTTCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS TCA 90 bp | CTCCCGTGTGAACCTGAAAGCTGGTGGGTACATCCTCAGGGTCTCTaGAATCACCATGTCCAGATACGGCAGACCTTCCTGCAGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LPCEPESWWVHPQGL*NHHVQIRQTFLQAV Trigger: CACAGCCTGCAGGAAGGTCTGCCGTATCTGGACATGGTGATTTCAGAGACCCTGAGGATGTACCCACCAGCTTTCAGGTTCACACGGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS CCA 90 bp | GCCAGCAGGTATGTGATGAAGGACAGCGTGTTTGTGATGACCTCATaGCCCGCAATGAGGAAGAGGAAGGCCTGGCCCACAATTTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: ASRYVMKDSVFVMTS*PAMRKRKAWPTISS Trigger: GGATGAAATTGTGGGCCAGGCCTTCCTCTTCCTCATTGCGGGCCATGAGGTCATCACAAACACGCTGTCCTTCATCACATACCTGCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS CCA 90 bp | ATGAAGAGGTCCACCTCTTTCAGAAGCCTCTCCTGGCAGTCAGGGTaGGTGGCCAGCAGGTATGTGATGAAGGACAGCGTGTTTGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: MKRSTSFRSLSWQSG*VASRYVMKDSVFVM Trigger: CATCACAAACACGCTGTCCTTCATCACATACCTGCTGGCCACCCACCCTGACTGCCAGGAGAGGCTTCTGAAAGAGGTGGACCTCTTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR CAA 90 bp | CCGGGTGCCCTCCTGCAGCGATGTGCAGATGTTACCATTACAAAGTGCTTCCTCCTCTCGGAGTTCCAATaGGCTCTCCCAAAAACCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PGALLQRCADVTITKCFLLSEFQ*ALPKTL Trigger: CAGGGTTTTTGGGAGAGCCAATTGGAACTCCGAGAG...GAGGAAGCACTTTGTAATGGTAACATCTGCACATCGCTGCAGGAGGGCACCCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS GCA 90 bp | GTTGCACAAAGGGATCTTCTGGAGAATTCTGGGAGTCCACCTGGGTaGCAAAGGCCACACTGGCCACCACATCTATGGTGTAACAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: VAQRDLLENSGSPPG*QRPHWPPHLWCNSS Trigger: ACTGCTGTTACACCATAGATGTGGTGGCCAGTGTGGCCTTTGGCACCCAGGTGGACTCCCAGAATTCTCCAGAAGATCCCTTTGTGCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR CAA 90 bp | CCGGGTGCCCTCCTGCAGCGATGTGCAGATGTTACCATTACAAAGTGCTTCCTCCCACTGACTTCAAACTaGAGAAGCCCCAACACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PGALLQRCADVTITKCFLPLTSN*RSPNTS Trigger: GGAAGTGTTGGGGCTTCTCAAGTTTGAAGTCAGTGG...GAGGAAGCACTTTGTAATGGTAACATCTGCACATCGCTGCAGGAGGGCACCCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR CAA 90 bp | GGTGCCCTCCTGCAGCGATGTGCAGATGTTACCATTACAAAGTGCTTCCTCTTTAGCACGCCGGCAGTGTaGCACAAAGGGATCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GALLQRCADVTITKCFLFSTPAV*HKGIFW Trigger: CCAGAAGATCCCTTTGTGCAACACTGCCGGCGTGCT...AAAGAGGAAGCACTTTGTAATGGTAACATCTGCACATCGCTGCAGGAGGGCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR CAA 90 bp | GGTGCCCTCCTGCAGCGATGTGCAGATGTTACCATTACAAAGTGCTTCCTCTTTACCTGCAGGGATACGTaGTCCCAGCACCTCACAGTC | + |
|
Preference number: 5 (lower is better) Translates to: GALLQRCADVTITKCFLFTCRDT*SQHLTV Trigger: GACTGTGAGGTGCTGGGACAACGTATCCCTGCAGGT...AAAGAGGAAGCACTTTGTAATGGTAACATCTGCACATCGCTGCAGGAGGGCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS CCA 90 bp | CACAGTGAAAGGCTTAGATGTGGAGGTAGGATGGCACCTTTGGGGTaGTTCCTTTGTGCACTCAGAAGAGGACAGGGATTCTGGGACCAT | + |
|
Preference number: 5 (lower is better) Translates to: HSERLRCGGRMAPLG*FLCALRRGQGFWDH Trigger: ATGGTCCCAGAATCCCTGTCCTCTTCTGAGTGCACAAAGGAACCACCCCAAAGGTGCCATCCTACCTCCACATCTAAGCCTTTCACTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR CAA 90 bp | CTGGGTAGAGCCAGGTCCATGCATATCTCAAGCCAATACCTTTCCAAAGCAGCAACAAAAGGAGAAGGCTaGGGGTGCCTGATGCCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: LGRARSMHISSQYLSKAATKGEG*GCLMPN Trigger: GTTGGGCATCAGGCACCCCAAGCCTTCTCCTTTTGT...TGCTGCTTTGGAAAGGTATTGGCTTGAGATATGCATGGACCTGGCTCTACCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162521.8 |
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| CDS CCA 90 bp | CCCACAATTTCATCCACAGTGAAAGGCTTAGATGTGGAGGTAGGATaGCACCTTTGGGGTGGTTCCTTTGTGCACTCAGAAGAGGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: PTISSTVKGLDVEVG*HLWGGSFVHSEEDR Trigger: CCTGTCCTCTTCTGAGTGCACAAAGGAACCACCCCAAAGGTGCCATCCTACCTCCACATCTAAGCCTTTCACTGTGGATGAAATTGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS CCA 90 bp | GTGTTTGTGATGACCTCATGGCCCGCAATGAGGAAGAGGAAGGCCTaGCCCACAATTTCATCCACAGTGAAAGGCTTAGATGTGGAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: VFVMTSWPAMRKRKA*PTISSTVKGLDVEV Trigger: TACCTCCACATCTAAGCCTTTCACTGTGGATGAAATTGTGGGCCAGGCCTTCCTCTTCCTCATTGCGGGCCATGAGGTCATCACAAACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS TCA 90 bp | TTGGCTGATGAGAGGTGTCATCTCATCCAACTTTTCAGGACTGAATaGAGACATCAGGGCACCCCTGACTTCCTCCCATCTTCTGTCACG | + |
|
Preference number: 5 (lower is better) Translates to: LADERCHLIQLFRTE*RHQGTPDFLPSSVT Trigger: CGTGACAGAAGATGGGAGGAAGTCAGGGGTGCCCTGATGTCTTCATTCAGTCCTGAAAAGTTGGATGAGATGACACCTCTCATCAGCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS TCA 90 bp | TGGCCACCACATCTATGGTGTAACAGCAGTAACACCTCTGGATGTTaGATGCGTCCCTGGATGCTGCATAGCGTTTTAAGTGAGCCACGA | + |
|
Preference number: 5 (lower is better) Translates to: WPPHLWCNSSNTSGC*MRPWMLHSVLSEPR Trigger: TCGTGGCTCACTTAAAACGCTATGCAGCATCCAGGGACGCATTCAACATCCAGAGGTGTTACTGCTGTTACACCATAGATGTGGTGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR CAA 90 bp | TCTTCTGGCCTCAGTCAGCTCCTGCATGCATGTGGTACACATACACTCATAAGGCCACTGACTTCAAACTaGAGAAGCCCCAACACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSGLSQLLHACGTHTLIRPLTSN*RSPNTS Trigger: GGAAGTGTTGGGGCTTCTCAAGTTTGAAGTCAGTGG...CCTTATGAGTGTATGTGTACCACATGCATGCAGGAGCTGACTGAGGCCAGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162521.8 |
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| CDS TCA 90 bp | GTTACTGAAGTTCTCAACCAACACCTGCTTGATCATGTCTGGCTCTaGAATGACAACGTGCATCCGACGGCCAAGATAGTACCCACACAG | + |
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Preference number: 5 (lower is better) Translates to: VTEVLNQHLLDHVWL*NDNVHPTAKIVPTQ Trigger: CTGTGTGGGTACTATCTTGGCCGTCGGATGCACGTTGTCATTTCAGAGCCAGACATGATCAAGCAGGTGTTGGTTGAGAACTTCAGTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003017.13 ENSMUST00000160963.2 |
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| CDS GCA 90 bp | GAGGCCATTCTGTTGGAAAAGTTACTGAAGTTCTCAACCAACACCTaGTTGATCATGTCTGGCTCTGAAATGACAACGTGCATCCGACGG | + |
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Preference number: 5 (lower is better) Translates to: EAILLEKLLKFSTNT*LIMSGSEMTTCIRR Trigger: CCGTCGGATGCACGTTGTCATTTCAGAGCCAGACATGATCAAGCAGGTGTTGGTTGAGAACTTCAGTAACTTTTCCAACAGAATGGCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003017.13 ENSMUST00000160963.2 |
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| CDS CCA 90 bp | CATCTCGGTTCTTATTGGGCAGAATCCGGGCCAATGGGACCATTATaGATGGAAATGATAAGATTAATACCAGGAGAGGCCTGGGGATAC | + |
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Preference number: 5 (lower is better) Translates to: HLGSYWAESGPMGPL*MEMIRLIPGEAWGY Trigger: GTATCCCCAGGCCTCTCCTGGTATTAATCTTATCATTTCCATCCATAATGGTCCCATTGGCCCGGATTCTGCCCAATAAGAACCGAGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR CAA 90 bp | GACAAAGTAGGCTCACATGCCATGTGCCCTTTTGATCACCCTAAGATATATATTACAAAAGGAGAAGGCTaGGGGTGCCTGATGCCCAAC | + |
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Preference number: 5 (lower is better) Translates to: DKVGSHAMCPFDHPKIYITKGEG*GCLMPN Trigger: GTTGGGCATCAGGCACCCCAAGCCTTCTCCTTTTGT...AATATATATCTTAGGGTGATCAAAAGGGCACATGGCATGTGAGCCTACTTTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR CAA 90 bp | GCGATGTGCAGATGTTACCATTACAAAGTGCTTCCTCTTTCCCACGTGCCTTCTCCTGAGGCCATTCTGTaGGAAAAGTTACTGAAGTTC | + |
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Preference number: 5 (lower is better) Translates to: AMCRCYHYKVLPLSHVPSPEAIL*EKLLKF Trigger: GAACTTCAGTAACTTTTCCAACAGAATGGCCTCAGG...AGAAGGCACGTGGGAAAGAGGAAGCACTTTGTAATGGTAACATCTGCACATCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR CAA 90 bp | GATGTGCAGATGTTACCATTACAAAGTGCTTCCTCTTTCCCACGTGCCTTCTATTCATCTCGGTTCTTATaGGGCAGAATCCGGGCCAAT | + |
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Preference number: 5 (lower is better) Translates to: DVQMLPLQSASSFPRAFYSSRFL*GRIRAN Trigger: ATTGGCCCGGATTCTGCCCAATAAGAACCGAGATGA...ATAGAAGGCACGTGGGAAAGAGGAAGCACTTTGTAATGGTAACATCTGCACATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR CAA 90 bp | GACAAAGTAGGCTCACATGCCATGTGCCCTTTTGATCACCCTAAGATATATATTGAGAAGTTCACAGGCTaGGCTGATGAGAGGTGTCAT | + |
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Preference number: 5 (lower is better) Translates to: DKVGSHAMCPFDHPKIYIEKFTG*ADERCH Trigger: ATGACACCTCTCATCAGCCAAGCCTGTGAACTTCTC...AATATATATCTTAGGGTGATCAAAAGGGCACATGGCATGTGAGCCTACTTTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS-3UTR CAA 90 bp | GTAGGCTCACATGCCATGTGCCCTTTTGATCACCCTAAGATATATATTCCTATATCAACCAACACCTGCTaGATCATGTCTGGCTCTGAA | + |
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Preference number: 5 (lower is better) Translates to: VGSHAMCPFDHPKIYIPISTNTC*IMSGSE Trigger: TTCAGAGCCAGACATGATCAAGCAGGTGTTGGTTGA...TATAGGAATATATATCTTAGGGTGATCAAAAGGGCACATGGCATGTGAGCCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS CAA 90 bp | CTGGCTTCAAAGCGGAACTTGTGTAGGACCTGGAGTATTGTCAGCTaGACCACCAGCAGGCCCAGCCGCACTCCGAGGCAGCTCCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: LASKRNLCRTWSIVS*TTSRPSRTPRQLLG Trigger: CCCCAGGAGCTGCCTCGGAGTGCGGCTGGGCCTGCTGGTGGTCAAGCTGACAATACTCCAGGTCCTACACAAGTTCCGCTTTGAAGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS TCA 72 bp | GCAGGCTGTGGTACTCAGGGGCTGGGTGCTTCCCCATaGAGAGGTCCACCTCTTTCAGAAGCCTCTCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: AGCGTQGLGASP*RGPPLSEASPG Trigger: GCCAGGAGAGGCTTCTGAAAGAGGTGGACCTCTTCATGGGGAAGCACCCAGCCCCTGAGTACCACAGCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS TCA 72 bp | AGCGGAACTTGTGTAGGACCTGGAGTATTGTCAGCTTaGCCACCAGCAGGCCCAGCCGCACTCCGAGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SGTCVGPGVLSA*PPAGPAALRGS Trigger: GCTGCCTCGGAGTGCGGCTGGGCCTGCTGGTGGTCAAGCTGACAATACTCCAGGTCCTACACAAGTTCCGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS CAA 72 bp | AAGCGGAACTTGTGTAGGACCTGGAGTATTGTCAGCTaGACCACCAGCAGGCCCAGCCGCACTCCGAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: KRNLCRTWSIVS*TTSRPSRTPRQ Trigger: CTGCCTCGGAGTGCGGCTGGGCCTGCTGGTGGTCAAGCTGACAATACTCCAGGTCCTACACAAGTTCCGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS CAA 90 bp | CAGGAGAGGCCTGGGGATACAGAAGGTGGAAGCACGCCGGCAGTGTaGCACAAAGGGATCTTCTGGAGAATTCTGGGAGTCCACCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: QERPGDTEGGSTPAV*HKGIFWRILGVHLG Trigger: ACCCAGGTGGACTCCCAGAATTCTCCAGAAGATCCCTTTGTGCAACACTGCCGGCGTGCTTCCACCTTCTGTATCCCCAGGCCTCTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS CCA 72 bp | CGGCAGTGTTGCACAAAGGGATCTTCTGGAGAATTCTaGGAGTCCACCTGGGTGCCAAAGGCCACACTGGCC | + |
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Preference number: 6 (lower is better) Translates to: RQCCTKGSSGEF*ESTWVPKATLA Trigger: GGCCAGTGTGGCCTTTGGCACCCAGGTGGACTCCCAGAATTCTCCAGAAGATCCCTTTGTGCAACACTGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS CCA 72 bp | TCAAAGCCTTCCACGCCCACAGAGTTCATGGAGTGCTaGGCATCCAGCACCATCTGCAGGAAGTCTCTCCGC | + |
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Preference number: 6 (lower is better) Translates to: SKPSTPTEFMEC*ASSTICRKSLR Trigger: GCGGAGAGACTTCCTGCAGATGGTGCTGGATGCCCAGCACTCCATGAACTCTGTGGGCGTGGAAGGCTTTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS CCA 72 bp | TCCACCTCTTTCAGAAGCCTCTCCTGGCAGTCAGGGTaGGTGGCCAGCAGGTATGTGATGAAGGACAGCGTG | + |
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Preference number: 6 (lower is better) Translates to: STSFRSLSWQSG*VASRYVMKDSV Trigger: CACGCTGTCCTTCATCACATACCTGCTGGCCACCCACCCTGACTGCCAGGAGAGGCTTCTGAAAGAGGTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS GCA 72 bp | ACAGAGTTCATGGAGTGCTGGGCATCCAGCACCATCTaGAGGAAGTCTCTCCGCCTCTCTTCTGCTGCTTGC | + |
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Preference number: 6 (lower is better) Translates to: TEFMECWASSTI*RKSLRLSSAAC Trigger: GCAAGCAGCAGAAGAGAGGCGGAGAGACTTCCTGCAGATGGTGCTGGATGCCCAGCACTCCATGAACTCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS GCA 72 bp | AGGGATACGTTGTCCCAGCACCTCACAGTCCTGTGCTaGCTCCCGTGTGAACCTGAAAGCTGGTGGGTACAT | + |
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Preference number: 6 (lower is better) Translates to: RDTLSQHLTVLC*LPCEPESWWVH Trigger: ATGTACCCACCAGCTTTCAGGTTCACACGGGAGGCAGCACAGGACTGTGAGGTGCTGGGACAACGTATCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS GCA 72 bp | CAGGTATGTGAACGGCCTCCGCTGAAGCCGGGCCTCTaGTGTGAACCTTTCAGGGTCAAAGGTCTCAGGATT | + |
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Preference number: 6 (lower is better) Translates to: QVCERPPLKPGL*CEPFRVKGLRI Trigger: AATCCTGAGACCTTTGACCCTGAAAGGTTCACAGCAGAGGCCCGGCTTCAGCGGAGGCCGTTCACATACCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS CCA 72 bp | GGACCATGTCAAAGCCTTCCACGCCCACAGAGTTCATaGAGTGCTGGGCATCCAGCACCATCTGCAGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: GPCQSLPRPQSS*SAGHPAPSAGS Trigger: ACTTCCTGCAGATGGTGCTGGATGCCCAGCACTCCATGAACTCTGTGGGCGTGGAAGGCTTTGACATGGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS CCA 72 bp | TCAGGGCTGGCTTCAAAGCGGAACTTGTGTAGGACCTaGAGTATTGTCAGCTTGACCACCAGCAGGCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: SGLASKRNLCRT*SIVSLTTSRPS Trigger: GCTGGGCCTGCTGGTGGTCAAGCTGACAATACTCCAGGTCCTACACAAGTTCCGCTTTGAAGCCAGCCCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS GCA 72 bp | ATGTCAAAGCCTTCCACGCCCACAGAGTTCATGGAGTaGTGGGCATCCAGCACCATCTGCAGGAAGTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: MSKPSTPTEFME*WASSTICRKSL Trigger: GAGAGACTTCCTGCAGATGGTGCTGGATGCCCAGCACTCCATGAACTCTGTGGGCGTGGAAGGCTTTGACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS CAA 72 bp | CCTGGGGATACAGAAGGTGGAAGCACGCCGGCAGTGTaGCACAAAGGGATCTTCTGGAGAATTCTGGGAGTC | + |
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Preference number: 6 (lower is better) Translates to: PGDTEGGSTPAV*HKGIFWRILGV Trigger: GACTCCCAGAATTCTCCAGAAGATCCCTTTGTGCAACACTGCCGGCGTGCTTCCACCTTCTGTATCCCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS CCA 72 bp | CCACACAGAGGCCCGTATCGCTCTCGGAGTTCCAATTaGCTCTCCCAAAAACCCTGGCGGAAAAACATCAAG | + |
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Preference number: 6 (lower is better) Translates to: PHRGPYRSRSSN*LSQKPWRKNIK Trigger: CTTGATGTTTTTCCGCCAGGGTTTTTGGGAGAGCCAATTGGAACTCCGAGAGCGATACGGGCCTCTGTGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000003017.13 ENSMUST00000160963.2 ENSMUST00000162521.8 |
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| CDS CCA 72 bp | TATGTGATGAAGGACAGCGTGTTTGTGATGACCTCATaGCCCGCAATGAGGAAGAGGAAGGCCTGGCCCACA | + |
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Preference number: 6 (lower is better) Translates to: YVMKDSVFVMTS*PAMRKRKAWPT Trigger: TGTGGGCCAGGCCTTCCTCTTCCTCATTGCGGGCCATGAGGTCATCACAAACACGCTGTCCTTCATCACATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS TCA 72 bp | CTCTCTGTATGTGTGAACTGTAGGGTACTTGTCCTTTaGAGGCATCCACACAGAGGCCCGTATCGCTCTCGG | + |
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Preference number: 6 (lower is better) Translates to: LSVCVNCRVLVL*RHPHRGPYRSR Trigger: CCGAGAGCGATACGGGCCTCTGTGTGGATGCCTTCAAAGGACAAGTACCCTACAGTTCACACATACAGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162521.8 |
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| CDS TCA 72 bp | CTGTTAGCAGGCACACCTTACCCAAGGGATGGAACATaGCAGGTCCAAACGAGAGCCACCTCTCTGTATGTG | + |
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Preference number: 6 (lower is better) Translates to: LLAGTPYPRDGT*QVQTRATSLYV Trigger: CACATACAGAGAGGTGGCTCTCGTTTGGACCTGTCATGTTCCATCCCTTGGGTAAGGTGTGCCTGCTAACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162521.8 |
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| CDS CCA 72 bp | TGGTTCCTTTGTGCACTCAGAAGAGGACAGGGATTCTaGGACCATGTCAAAGCCTTCCACGCCCACAGAGTT | + |
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Preference number: 6 (lower is better) Translates to: WFLCALRRGQGF*DHVKAFHAHRV Trigger: AACTCTGTGGGCGTGGAAGGCTTTGACATGGTCCCAGAATCCCTGTCCTCTTCTGAGTGCACAAAGGAACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS CCA 72 bp | GTGAAAGGCTTAGATGTGGAGGTAGGATGGCACCTTTaGGGTGGTTCCTTTGTGCACTCAGAAGAGGACAGG | + |
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Preference number: 6 (lower is better) Translates to: VKGLDVEVGWHL*GGSFVHSEEDR Trigger: CCTGTCCTCTTCTGAGTGCACAAAGGAACCACCCCAAAGGTGCCATCCTACCTCCACATCTAAGCCTTTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS CCA 72 bp | ATGACCTCATGGCCCGCAATGAGGAAGAGGAAGGCCTaGCCCACAATTTCATCCACAGTGAAAGGCTTAGAT | + |
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Preference number: 6 (lower is better) Translates to: MTSWPAMRKRKA*PTISSTVKGLD Trigger: ATCTAAGCCTTTCACTGTGGATGAAATTGTGGGCCAGGCCTTCCTCTTCCTCATTGCGGGCCATGAGGTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS CCA 72 bp | TGGATTCTAGCTGAAGTGGAACCTGAGTCTCAGGGCTaGCTTCAAAGCGGAACTTGTGTAGGACCTGGAGTA | + |
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Preference number: 6 (lower is better) Translates to: WILAEVEPESQG*LQSGTCVGPGV Trigger: TACTCCAGGTCCTACACAAGTTCCGCTTTGAAGCCAGCCCTGAGACTCAGGTTCCACTTCAGCTAGAATCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS CAA 72 bp | AGTGAAAGGCTTAGATGTGGAGGTAGGATGGCACCTTaGGGGTGGTTCCTTTGTGCACTCAGAAGAGGACAG | + |
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Preference number: 6 (lower is better) Translates to: SERLRCGGRMAP*GWFLCALRRGQ Trigger: CTGTCCTCTTCTGAGTGCACAAAGGAACCACCCCAAAGGTGCCATCCTACCTCCACATCTAAGCCTTTCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS TCA 72 bp | GAGAGGTGTCATCTCATCCAACTTTTCAGGACTGAATaGAGACATCAGGGCACCCCTGACTTCCTCCCATCT | + |
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Preference number: 6 (lower is better) Translates to: ERCHLIQLFRTE*RHQGTPDFLPS Trigger: AGATGGGAGGAAGTCAGGGGTGCCCTGATGTCTTCATTCAGTCCTGAAAAGTTGGATGAGATGACACCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS CCA 72 bp | TCATCCACAGTGAAAGGCTTAGATGTGGAGGTAGGATaGCACCTTTGGGGTGGTTCCTTTGTGCACTCAGAA | + |
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Preference number: 6 (lower is better) Translates to: SSTVKGLDVEVG*HLWGGSFVHSE Trigger: TTCTGAGTGCACAAAGGAACCACCCCAAAGGTGCCATCCTACCTCCACATCTAAGCCTTTCACTGTGGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS TCA 72 bp | GTTCTCAACCAACACCTGCTTGATCATGTCTGGCTCTaGAATGACAACGTGCATCCGACGGCCAAGATAGTA | + |
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Preference number: 6 (lower is better) Translates to: VLNQHLLDHVWL*NDNVHPTAKIV Trigger: TACTATCTTGGCCGTCGGATGCACGTTGTCATTTCAGAGCCAGACATGATCAAGCAGGTGTTGGTTGAGAAC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003017.13 ENSMUST00000160963.2 |
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| CDS CAA 90 bp | GCCATTCTGTTGGAAAAGTTACTGAAGTTCTCAACCAACACCTGCTaGATCATGTCTGGCTCTGAAATGACAACGTGCATCCGACGGCCA | + |
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Preference number: 6 (lower is better) Translates to: AILLEKLLKFSTNTC*IMSGSEMTTCIRRP Trigger: TGGCCGTCGGATGCACGTTGTCATTTCAGAGCCAGACATGATCAAGCAGGTGTTGGTTGAGAACTTCAGTAACTTTTCCAACAGAATGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003017.13 ENSMUST00000160963.2 |
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| CDS CAA 90 bp | TCCCATCTTCTGTCACGTAACAACAGGACACTGTCTGCTACCATCTaGGGTTCCAGACCTGAGGCCATTCTGTTGGAAAAGTTACTGAAG | + |
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Preference number: 6 (lower is better) Translates to: SHLLSRNNRTLSATI*GSRPEAILLEKLLK Trigger: CTTCAGTAACTTTTCCAACAGAATGGCCTCAGGTCTGGAACCCAAGATGGTAGCAGACAGTGTCCTGTTGTTACGTGACAGAAGATGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003017.13 ENSMUST00000160963.2 |
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| CDS TCA 72 bp | CATCTATGGTGTAACAGCAGTAACACCTCTGGATGTTaGATGCGTCCCTGGATGCTGCATAGCGTTTTAAGT | + |
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Preference number: 6 (lower is better) Translates to: HLWCNSSNTSGC*MRPWMLHSVLS Trigger: ACTTAAAACGCTATGCAGCATCCAGGGACGCATTCAACATCCAGAGGTGTTACTGCTGTTACACCATAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS CCA 72 bp | TCTTATTGGGCAGAATCCGGGCCAATGGGACCATTATaGATGGAAATGATAAGATTAATACCAGGAGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: SYWAESGPMGPL*MEMIRLIPGEA Trigger: GGCCTCTCCTGGTATTAATCTTATCATTTCCATCCATAATGGTCCCATTGGCCCGGATTCTGCCCAATAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003017.13 |
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| CDS GCA 72 bp | CTGTTGGAAAAGTTACTGAAGTTCTCAACCAACACCTaGTTGATCATGTCTGGCTCTGAAATGACAACGTGC | + |
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Preference number: 6 (lower is better) Translates to: LLEKLLKFSTNT*LIMSGSEMTTC Trigger: GCACGTTGTCATTTCAGAGCCAGACATGATCAAGCAGGTGTTGGTTGAGAACTTCAGTAACTTTTCCAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003017.13 ENSMUST00000160963.2 |
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| CDS CAA 72 bp | TTGGAAAAGTTACTGAAGTTCTCAACCAACACCTGCTaGATCATGTCTGGCTCTGAAATGACAACGTGCATC | + |
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Preference number: 6 (lower is better) Translates to: LEKLLKFSTNTC*IMSGSEMTTCI Trigger: GATGCACGTTGTCATTTCAGAGCCAGACATGATCAAGCAGGTGTTGGTTGAGAACTTCAGTAACTTTTCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003017.13 ENSMUST00000160963.2 |
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