Pregenerated sensors for TBXA2R (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034881Ensembl transcript IDs: ENSMUST00000105325.4, ENSMUST00000220312.2
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGCAGCCATGGAGCAAGGGGGCTCAGGAAACACTGGAGAGGTTGGTaGACCCAGCTACAGGGAACAGAGTGGGTGCTTCCAACACCCAAG | + |
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Preference number: 1 (lower is better) Translates to: GSHGARGLRKHWRGW*TQLQGTEWVLPTPK Trigger: CTTGGGTGTTGGAAGCACCCACTCTGTTCCCTGTAGCTGGGTTCACCAACCTCTCCAGTGTTTCCTGAGCCCCCTTGCTCCATGGCTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| 3UTR GCA 90 bp | CCTGTGAGCCTGGAGGAATGTGAAGCCCTGTGTCTCAGACTCAGATaGTGGCAAGGGGGAAGACACCTCCAGCATCCCAGGTTTTCCCTG | + |
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Preference number: 1 (lower is better) Translates to: PVSLEECEALCLRLR*WQGGRHLQHPRFSL Trigger: CAGGGAAAACCTGGGATGCTGGAGGTGTCTTCCCCCTTGCCAGCATCTGAGTCTGAGACACAGGGCTTCACATTCCTCCAGGCTCACAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| 3UTR TCA 90 bp | TGCTTCCAACACCCAAGGCTGGTGACCTGTGAGCCTGGAGGAATGTaGAGCCCTGTGTCTCAGACTCAGATGCTGGCAAGGGGGAAGACA | + |
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Preference number: 1 (lower is better) Translates to: CFQHPRLVTCEPGGM*SPVSQTQMLARGKT Trigger: TGTCTTCCCCCTTGCCAGCATCTGAGTCTGAGACACAGGGCTTCACATTCCTCCAGGCTCACAGGTCACCAGCCTTGGGTGTTGGAAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| 3UTR TCA 90 bp | CAGGGAACAGAGTGGGTGCTTCCAACACCCAAGGCTGGTGACCTGTaGGCCTGGAGGAATGTGAAGCCCTGTGTCTCAGACTCAGATGCT | + |
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Preference number: 1 (lower is better) Translates to: QGTEWVLPTPKAGDL*AWRNVKPCVSDSDA Trigger: AGCATCTGAGTCTGAGACACAGGGCTTCACATTCCTCCAGGCTCACAGGTCACCAGCCTTGGGTGTTGGAAGCACCCACTCTGTTCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| 3UTR-3UTR TCA 90 bp | AGACTCAGATGCTGGCAAGGGGGAAGACACCTCCAGCATCCCAGGTTTTCCCTGCCCCAGCCTCCTGGCTaGCAGGGAGTAGTCCGGGGA | + |
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Preference number: 2 (lower is better) Translates to: RLRCWQGGRHLQHPRFSLPQPPG*QGVVRG Trigger: TCCCCGGACTACTCCCTGTCAGCCAGGAGGCTGGGG...CAGGGAAAACCTGGGATGCTGGAGGTGTCTTCCCCCTTGCCAGCATCTGAGTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| 3UTR-3UTR CCA 90 bp | TGGAATCCTAGATTCCTGCCAGGGGGCCTCCCACATGTGCCCCCAGCCTCCTGGAAGCACTCAGGCTCCTaGGGCAGGGCACAGGTCAAT | + |
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Preference number: 2 (lower is better) Translates to: WNPRFLPGGLPHVPPASWKHSGS*GRAQVN Trigger: ATTGACCTGTGCCCTGCCCCAGGAGCCTGAGTGCTT...CCAGGAGGCTGGGGGCACATGTGGGAGGCCCCCTGGCAGGAATCTAGGATTCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| 3UTR-3UTR CCA 90 bp | AGGTTGGTGAACCCAGCTACAGGGAACAGAGTGGGTGCTTCCAACACCCAAGGCGTGCCCCCAGCCTCCTaGCTGACAGGGAGTAGTCCG | + |
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Preference number: 2 (lower is better) Translates to: RLVNPATGNRVGASNTQGVPPAS*LTGSSP Trigger: CGGACTACTCCCTGTCAGCCAGGAGGCTGGGGGCAC...GCCTTGGGTGTTGGAAGCACCCACTCTGTTCCCTGTAGCTGGGTTCACCAACCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTGTCTCAGACTCAGATGCTGGCAAGGGGGAAGACACCTCCAGCATCCCAGGAAGCACTCAGGCTCCTaGGGCAGGGCACAGGTCAAT | + |
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Preference number: 2 (lower is better) Translates to: LCLRLRCWQGGRHLQHPRKHSGS*GRAQVN Trigger: ATTGACCTGTGCCCTGCCCCAGGAGCCTGAGTGCTT...CCTGGGATGCTGGAGGTGTCTTCCCCCTTGCCAGCATCTGAGTCTGAGACACAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| 3UTR CAA 90 bp | GTTAGGCAGCCATGGAGCAAGGGGGCTCAGGAAACACTGGAGAGGTaGGTGAACCCAGCTACAGGGAACAGAGTGGGTGCTTCCAACACC | + |
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Preference number: 2 (lower is better) Translates to: VRQPWSKGAQETLER*VNPATGNRVGASNT Trigger: GGTGTTGGAAGCACCCACTCTGTTCCCTGTAGCTGGGTTCACCAACCTCTCCAGTGTTTCCTGAGCCCCCTTGCTCCATGGCTGCCTAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| 3UTR-3UTR GCA 90 bp | AGACTCAGATGCTGGCAAGGGGGAAGACACCTCCAGCATCCCAGGTTTTCCCTGGGAATCCTAGATTCCTaGCAGGGGGCCTCCCACATG | + |
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Preference number: 2 (lower is better) Translates to: RLRCWQGGRHLQHPRFSLGILDS*QGASHM Trigger: CATGTGGGAGGCCCCCTGGCAGGAATCTAGGATTCC...CAGGGAAAACCTGGGATGCTGGAGGTGTCTTCCCCCTTGCCAGCATCTGAGTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| 3UTR-3UTR GCA 90 bp | AGGTTGGTGAACCCAGCTACAGGGAACAGAGTGGGTGCTTCCAACACCCAAGGCGGAATCCTAGATTCCTaGCAGGGGGCCTCCCACATG | + |
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Preference number: 2 (lower is better) Translates to: RLVNPATGNRVGASNTQGGILDS*QGASHM Trigger: CATGTGGGAGGCCCCCTGGCAGGAATCTAGGATTCC...GCCTTGGGTGTTGGAAGCACCCACTCTGTTCCCTGTAGCTGGGTTCACCAACCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| 3UTR-3UTR CCA 90 bp | TGGAGGAATGTGAAGCCCTGTGTCTCAGACTCAGATGCTGGCAAGGGGGAAGACCCCAGGTTTTCCCTGTaGAATCCTAGATTCCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: WRNVKPCVSDSDAGKGEDPRFSL*NPRFLP Trigger: TGGCAGGAATCTAGGATTCCACAGGGAAAACCTGGG...GTCTTCCCCCTTGCCAGCATCTGAGTCTGAGACACAGGGCTTCACATTCCTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| 3UTR-3UTR CCA 90 bp | ACACTGGAGAGGTTGGTGAACCCAGCTACAGGGAACAGAGTGGGTGCTTCCAACCCCAGGTTTTCCCTGTaGAATCCTAGATTCCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: TLERLVNPATGNRVGASNPRFSL*NPRFLP Trigger: TGGCAGGAATCTAGGATTCCACAGGGAAAACCTGGG...GTTGGAAGCACCCACTCTGTTCCCTGTAGCTGGGTTCACCAACCTCTCCAGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| 3UTR CCA 72 bp | CAAGCACTCAGGCTCCTGGGGCAGGGCACAGGTCAATaGCAGTCACCAAGGACCCCAGGTTTAAGTGGCACT | + |
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Preference number: 3 (lower is better) Translates to: QALRLLGQGTGQ*QSPRTPGLSGT Trigger: AGTGCCACTTAAACCTGGGGTCCTTGGTGACTGCCATTGACCTGTGCCCTGCCCCAGGAGCCTGAGTGCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| 3UTR TCA 72 bp | GGGAACAGAGTGGGTGCTTCCAACACCCAAGGCTGGTaGCCTGTGAGCCTGGAGGAATGTGAAGCCCTGTGT | + |
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Preference number: 3 (lower is better) Translates to: GNRVGASNTQGW*PVSLEECEALC Trigger: ACACAGGGCTTCACATTCCTCCAGGCTCACAGGTCACCAGCCTTGGGTGTTGGAAGCACCCACTCTGTTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| 3UTR GCA 72 bp | GAGGTTGGTGAACCCAGCTACAGGGAACAGAGTGGGTaGTTCCAACACCCAAGGCTGGTGACCTGTGAGCCT | + |
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Preference number: 3 (lower is better) Translates to: EVGEPSYREQSG*FQHPRLVTCEP Trigger: AGGCTCACAGGTCACCAGCCTTGGGTGTTGGAAGCACCCACTCTGTTCCCTGTAGCTGGGTTCACCAACCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| CDS-3UTR CCA 90 bp | GGAATCCTAGATTCCTGCCAGGGGGCCTCCCACATGTGCCCCCAGCCTCCTGGCAGCGCTCAGAGGCCATaGCGGCCCCCAGGAGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: GILDSCQGASHMCPQPPGSAQRP*RPPGAG Trigger: CCCTGCTCCTGGGGGCCGCCATGGCCTCTGAGCGCT...GCCAGGAGGCTGGGGGCACATGTGGGAGGCCCCCTGGCAGGAATCTAGGATTCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| CDS-3UTR CCA 90 bp | TGGAATCCTAGATTCCTGCCAGGGGGCCTCCCACATGTGCCCCCAGCCTCCTGGGAGCATGGCCTGGGCTaGAGGCCGGCGCAAGGACAC | + |
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Preference number: 4 (lower is better) Translates to: WNPRFLPGGLPHVPPASWEHGLG*RPAQGH Trigger: GTGTCCTTGCGCCGGCCTCCAGCCCAGGCCATGCTC...CCAGGAGGCTGGGGGCACATGTGGGAGGCCCCCTGGCAGGAATCTAGGATTCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| CDS-3UTR CCA 90 bp | TGGAATCCTAGATTCCTGCCAGGGGGCCTCCCACATGTGCCCCCAGCCTCCTGGCCACTGAGCATGGCCTaGGCTGGAGGCCGGCGCAAG | + |
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Preference number: 4 (lower is better) Translates to: WNPRFLPGGLPHVPPASWPLSMA*AGGRRK Trigger: CTTGCGCCGGCCTCCAGCCCAGGCCATGCTCAGTGG...CCAGGAGGCTGGGGGCACATGTGGGAGGCCCCCTGGCAGGAATCTAGGATTCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| CDS-3UTR CCA 90 bp | AGCACTCAGGCTCCTGGGGCAGGGCACAGGTCAATGGCAGTCACCAAGGACCCCGCAGCTGGTGCTCTGTaGCCCGCAACAGCTGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: STQAPGAGHRSMAVTKDPAAGAL*PATAAQ Trigger: CTGGGCAGCTGTTGCGGGCCACAGAGCACCAGCTGC...GGGGTCCTTGGTGACTGCCATTGACCTGTGCCCTGCCCCAGGAGCCTGAGTGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| CDS-3UTR CCA 90 bp | GCCCCATGTCGTAGCTCCGTCCTTAGTCCACCAAGCACTCAGGCTCCTGGGGCAGAGCATGGCCTGGGCTaGAGGCCGGCGCAAGGACAC | + |
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Preference number: 4 (lower is better) Translates to: APCRSSVLSPPSTQAPGAEHGLG*RPAQGH Trigger: GTGTCCTTGCGCCGGCCTCCAGCCCAGGCCATGCTC...TGCCCCAGGAGCCTGAGTGCTTGGTGGACTAAGGACGGAGCTACGACATGGGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| CDS-3UTR CCA 90 bp | GCCCCATGTCGTAGCTCCGTCCTTAGTCCACCAAGCACTCAGGCTCCTGGGGCACCACTGAGCATGGCCTaGGCTGGAGGCCGGCGCAAG | + |
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Preference number: 4 (lower is better) Translates to: APCRSSVLSPPSTQAPGAPLSMA*AGGRRK Trigger: CTTGCGCCGGCCTCCAGCCCAGGCCATGCTCAGTGG...TGCCCCAGGAGCCTGAGTGCTTGGTGGACTAAGGACGGAGCTACGACATGGGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| CDS-3UTR TCA 90 bp | GGAATCCTAGATTCCTGCCAGGGGGCCTCCCACATGTGCCCCCAGCCTCCTGGCCACAGCCTGGAGCTGTaGACTGAACCGCGGATGCAG | + |
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Preference number: 4 (lower is better) Translates to: GILDSCQGASHMCPQPPGHSLEL*TEPRMQ Trigger: CTGCATCCGCGGTTCAGTTCACAGCTCCAGGCTGTG...GCCAGGAGGCTGGGGGCACATGTGGGAGGCCCCCTGGCAGGAATCTAGGATTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| CDS-3UTR CCA 90 bp | CTGTGTCTCAGACTCAGATGCTGGCAAGGGGGAAGACACCTCCAGCATCCCAGGAGCGCTCAGAGGCCATaGCGGCCCCCAGGAGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: LCLRLRCWQGGRHLQHPRSAQRP*RPPGAG Trigger: CCCTGCTCCTGGGGGCCGCCATGGCCTCTGAGCGCT...CCTGGGATGCTGGAGGTGTCTTCCCCCTTGCCAGCATCTGAGTCTGAGACACAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| CDS-3UTR CCA 90 bp | CCCCATGTCGTAGCTCCGTCCTTAGTCCACCAAGCACTCAGGCTCCTGGGGCAGGCAGCTGGTGCTCTGTaGCCCGCAACAGCTGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: PHVVAPSLVHQALRLLGQAAGAL*PATAAQ Trigger: CTGGGCAGCTGTTGCGGGCCACAGAGCACCAGCTGC...CTGCCCCAGGAGCCTGAGTGCTTGGTGGACTAAGGACGGAGCTACGACATGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| CDS-3UTR GCA 90 bp | GCACTCAGGCTCCTGGGGCAGGGCACAGGTCAATGGCAGTCACCAAGGACCCCAATGGCACGTCGCTCCTaGAGCGTGATGTTCACCGGG | + |
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Preference number: 4 (lower is better) Translates to: ALRLLGQGTGQWQSPRTPMARRS*SVMFTG Trigger: CCCGGTGAACATCACGCTGCAGGAGCGACGTGCCAT...TGGGGTCCTTGGTGACTGCCATTGACCTGTGCCCTGCCCCAGGAGCCTGAGTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| CDS-3UTR CCA 90 bp | AGCACTCAGGCTCCTGGGGCAGGGCACAGGTCAATGGCAGTCACCAAGGACCCCCGCAAGGACACAGCCTaGAGCTGTGAACTGAACCGC | + |
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Preference number: 4 (lower is better) Translates to: STQAPGAGHRSMAVTKDPRKDTA*SCELNR Trigger: GCGGTTCAGTTCACAGCTCCAGGCTGTGTCCTTGCG...GGGGTCCTTGGTGACTGCCATTGACCTGTGCCCTGCCCCAGGAGCCTGAGTGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| CDS-3UTR TCA 90 bp | AGACTCAGATGCTGGCAAGGGGGAAGACACCTCCAGCATCCCAGGTTTTCCCTGCCACGATGGCGCCGGTaGCTAGCAGCCCCAGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: RLRCWQGGRHLQHPRFSLPRWRR*LAAPGS Trigger: ACTTCCTGGGGCTGCTAGTCACCGGCGCCATCGTGG...CAGGGAAAACCTGGGATGCTGGAGGTGTCTTCCCCCTTGCCAGCATCTGAGTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| CDS-3UTR TCA 90 bp | GCACTCAGGCTCCTGGGGCAGGGCACAGGTCAATGGCAGTCACCAAGGACCCCAATGATGCCCACGAGCTaGACCATCATCTCCACCTCG | + |
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Preference number: 4 (lower is better) Translates to: ALRLLGQGTGQWQSPRTPMMPTS*TIISTS Trigger: CGAGGTGGAGATGATGGTTCAGCTCGTGGGCATCAT...TGGGGTCCTTGGTGACTGCCATTGACCTGTGCCCTGCCCCAGGAGCCTGAGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| CDS-3UTR TCA 90 bp | AGGTTGGTGAACCCAGCTACAGGGAACAGAGTGGGTGCTTCCAACACCCAAGGCGCCCCAGGAAGTCGGTaGGAACAAGGCCGCACAGCA | + |
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Preference number: 4 (lower is better) Translates to: RLVNPATGNRVGASNTQGAPGSR*EQGRTA Trigger: TGCTGTGCGGCCTTGTTCTCACCGACTTCCTGGGGC...GCCTTGGGTGTTGGAAGCACCCACTCTGTTCCCTGTAGCTGGGTTCACCAACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| CDS-3UTR TCA 90 bp | GGAGAGGTTGGTGAACCCAGCTACAGGGAACAGAGTGGGTGCTTCCAACACCCAGCCCCAGGAAGTCGGTaGGAACAAGGCCGCACAGCA | + |
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Preference number: 4 (lower is better) Translates to: GEVGEPSYREQSGCFQHPAPGSR*EQGRTA Trigger: TGCTGTGCGGCCTTGTTCTCACCGACTTCCTGGGGC...TGGGTGTTGGAAGCACCCACTCTGTTCCCTGTAGCTGGGTTCACCAACCTCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| CDS-3UTR TCA 90 bp | TGGAGGAATGTGAAGCCCTGTGTCTCAGACTCAGATGCTGGCAAGGGGGAAGACCCACGATGGCGCCGGTaGCTAGCAGCCCCAGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: WRNVKPCVSDSDAGKGEDPRWRR*LAAPGS Trigger: ACTTCCTGGGGCTGCTAGTCACCGGCGCCATCGTGG...GTCTTCCCCCTTGCCAGCATCTGAGTCTGAGACACAGGGCTTCACATTCCTCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| CDS-3UTR TCA 90 bp | AGGTTGGTGAACCCAGCTACAGGGAACAGAGTGGGTGCTTCCAACACCCAAGGCCCGTGGCCACCACCATaGTGCCCACGAGCTGAACCA | + |
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Preference number: 4 (lower is better) Translates to: RLVNPATGNRVGASNTQGPWPPP*CPRAEP Trigger: TGGTTCAGCTCGTGGGCATCATGGTGGTGGCCACGG...GCCTTGGGTGTTGGAAGCACCCACTCTGTTCCCTGTAGCTGGGTTCACCAACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| CDS-3UTR TCA 90 bp | AGGTTTTCCCTGTGGAATCCTAGATTCCTGCCAGGGGGCCTCCCACATGTGCCCCCACACGCAGGTAGATaGGCAGCTGGTGCTCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: RFSLWNPRFLPGGLPHVPPHAGR*AAGALW Trigger: CCACAGAGCACCAGCTGCTCATCTACCTGCGTGTGG...GGGCACATGTGGGAGGCCCCCTGGCAGGAATCTAGGATTCCACAGGGAAAACCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| CDS-3UTR GCA 90 bp | AGGTTTTCCCTGTGGAATCCTAGATTCCTGCCAGGGGGCCTCCCACATGTGCCCCGCGCTGCCCAGGAGTaGGAATATGAGCCCGAAGAC | + |
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Preference number: 4 (lower is better) Translates to: RFSLWNPRFLPGGLPHVPRAAQE*EYEPED Trigger: GTCTTCGGGCTCATATTCGCACTCCTGGGCAGCGCG...GGGCACATGTGGGAGGCCCCCTGGCAGGAATCTAGGATTCCACAGGGAAAACCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| CDS-3UTR TCA 90 bp | TGGAGGAATGTGAAGCCCTGTGTCTCAGACTCAGATGCTGGCAAGGGGGAAGACCCGTGGCCACCACCATaGTGCCCACGAGCTGAACCA | + |
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Preference number: 4 (lower is better) Translates to: WRNVKPCVSDSDAGKGEDPWPPP*CPRAEP Trigger: TGGTTCAGCTCGTGGGCATCATGGTGGTGGCCACGG...GTCTTCCCCCTTGCCAGCATCTGAGTCTGAGACACAGGGCTTCACATTCCTCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| CDS-3UTR TCA 90 bp | CTGGAGAGGTTGGTGAACCCAGCTACAGGGAACAGAGTGGGTGCTTCCAACACCCCACACGCAGGTAGATaGGCAGCTGGTGCTCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: LERLVNPATGNRVGASNTPHAGR*AAGALW Trigger: CCACAGAGCACCAGCTGCTCATCTACCTGCGTGTGG...GGTGTTGGAAGCACCCACTCTGTTCCCTGTAGCTGGGTTCACCAACCTCTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| CDS-3UTR TCA 90 bp | AGCCTGGAGGAATGTGAAGCCCTGTGTCTCAGACTCAGATGCTGGCAAGGGGGACACAGCCTGGAGCTGTaGACTGAACCGCGGATGCAG | + |
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Preference number: 4 (lower is better) Translates to: SLEECEALCLRLRCWQGGHSLEL*TEPRMQ Trigger: CTGCATCCGCGGTTCAGTTCACAGCTCCAGGCTGTG...TCCCCCTTGCCAGCATCTGAGTCTGAGACACAGGGCTTCACATTCCTCCAGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| CDS-3UTR GCA 90 bp | AGACTCAGATGCTGGCAAGGGGGAAGACACCTCCAGCATCCCAGGTTTTCCCTGATGGCACGTCGCTCCTaGAGCGTGATGTTCACCGGG | + |
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Preference number: 4 (lower is better) Translates to: RLRCWQGGRHLQHPRFSLMARRS*SVMFTG Trigger: CCCGGTGAACATCACGCTGCAGGAGCGACGTGCCAT...CAGGGAAAACCTGGGATGCTGGAGGTGTCTTCCCCCTTGCCAGCATCTGAGTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| CDS-3UTR GCA 90 bp | CTGGAGGAATGTGAAGCCCTGTGTCTCAGACTCAGATGCTGGCAAGGGGGAAGAAGCCAGCACACTCAGTaGCAGCAGGTTGGACCCCAG | + |
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Preference number: 4 (lower is better) Translates to: LEECEALCLRLRCWQGGRSQHTQ*QQVGPQ Trigger: CTGGGGTCCAACCTGCTGGCACTGAGTGTGCTGGCT...TCTTCCCCCTTGCCAGCATCTGAGTCTGAGACACAGGGCTTCACATTCCTCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| CDS-3UTR GCA 90 bp | TGGAGGAATGTGAAGCCCTGTGTCTCAGACTCAGATGCTGGCAAGGGGGAAGACAGCCAGCACACTCAGTaGCAGCAGGTTGGACCCCAG | + |
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Preference number: 4 (lower is better) Translates to: WRNVKPCVSDSDAGKGEDSQHTQ*QQVGPQ Trigger: CTGGGGTCCAACCTGCTGGCACTGAGTGTGCTGGCT...GTCTTCCCCCTTGCCAGCATCTGAGTCTGAGACACAGGGCTTCACATTCCTCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| CDS-3UTR GCA 90 bp | CTGGAGAGGTTGGTGAACCCAGCTACAGGGAACAGAGTGGGTGCTTCCAACACCATGACAGGTGGTGTCTaGAACAAAGTCTGCATGATG | + |
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Preference number: 4 (lower is better) Translates to: LERLVNPATGNRVGASNTMTGGV*NKVCMM Trigger: CATCATGCAGACTTTGTTGCAGACACCACCTGTCAT...GGTGTTGGAAGCACCCACTCTGTTCCCTGTAGCTGGGTTCACCAACCTCTCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| CDS-3UTR GCA 90 bp | ACACTGGAGAGGTTGGTGAACCCAGCTACAGGGAACAGAGTGGGTGCTTCCAACATGACAGGTGGTGTCTaGAACAAAGTCTGCATGATG | + |
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Preference number: 4 (lower is better) Translates to: TLERLVNPATGNRVGASNMTGGV*NKVCMM Trigger: CATCATGCAGACTTTGTTGCAGACACCACCTGTCAT...GTTGGAAGCACCCACTCTGTTCCCTGTAGCTGGGTTCACCAACCTCTCCAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| CDS TCA 90 bp | CAGCCCGACAGTAGCCCAGGCGCGGCGCGATGTGGCCGTGGGTCGTaGGAAGGGCCGTGTGATGCCCACGAAGCGCTCAGAGGCCATGGC | + |
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Preference number: 5 (lower is better) Translates to: QPDSSPGAARCGRGS*EGPCDAHEALRGHG Trigger: GCCATGGCCTCTGAGCGCTTCGTGGGCATCACACGGCCCTTCTCACGACCCACGGCCACATCGCGCCGCGCCTGGGCTACTGTCGGGCTG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| CDS GCA 90 bp | CGGCAGCTGGGGTCAGTGGCTCGCCAGTCCAACAAGGCAGCGTGTTaGGACGCCACGATGGCGCCGGTGACTAGCAGCCCCAGGAAGTCG | + |
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Preference number: 5 (lower is better) Translates to: RQLGSVARQSNKAAC*DATMAPVTSSPRKS Trigger: CGACTTCCTGGGGCTGCTAGTCACCGGCGCCATCGTGGCGTCGCAACACGCTGCCTTGTTGGACTGGCGAGCCACTGACCCCAGCTGCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| CDS CCA 90 bp | CCACTGAGCATGGCCTGGGCTGGAGGCCGGCGCAAGGACACAGCCTaGAGCTGTGAACTGAACCGCGGATGCAGGCGCCGGAGCACAGAC | + |
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Preference number: 5 (lower is better) Translates to: PLSMAWAGGRRKDTA*SCELNRGCRRRSTD Trigger: GTCTGTGCTCCGGCGCCTGCATCCGCGGTTCAGTTCACAGCTCCAGGCTGTGTCCTTGCGCCGGCCTCCAGCCCAGGCCATGCTCAGTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| CDS GCA 90 bp | GGTGTTGAGCAGGAGGGACAGCCCCACGGACGCGCTGCCCAGGAGTaGGAATATGAGCCCGAAGACCACGTCACCGCGCTGTGTCCCGAG | + |
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Preference number: 5 (lower is better) Translates to: GVEQEGQPHGRAAQE*EYEPEDHVTALCPE Trigger: CTCGGGACACAGCGCGGTGACGTGGTCTTCGGGCTCATATTCGCACTCCTGGGCAGCGCGTCCGTGGGGCTGTCCCTCCTGCTCAACACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| CDS CCA 90 bp | CATGATGCCCACGAGCTGAACCATCATCTCCACCTCGCAGTCCCGTaGGCGCTGTGTGGCCTCGCGCGTGTGGTAGACCCGGCAGAGTGT | + |
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Preference number: 5 (lower is better) Translates to: HDAHELNHHLHLAVP*ALCGLARVVDPAEC Trigger: ACACTCTGCCGGGTCTACCACACGCGCGAGGCCACACAGCGCCCACGGGACTGCGAGGTGGAGATGATGGTTCAGCTCGTGGGCATCATG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| CDS-3UTR CAA 90 bp | CTGTGTCTCAGACTCAGATGCTGGCAAGGGGGAAGACACCTCCAGCATCCCAGGCTCAGTGCCAGCAGGTaGGACCCCAGGCCCAGCGCG | + |
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Preference number: 5 (lower is better) Translates to: LCLRLRCWQGGRHLQHPRLSASR*DPRPSA Trigger: CGCGCTGGGCCTGGGGTCCAACCTGCTGGCACTGAG...CCTGGGATGCTGGAGGTGTCTTCCCCCTTGCCAGCATCTGAGTCTGAGACACAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| CDS-3UTR CAA 90 bp | CTGGAGAGGTTGGTGAACCCAGCTACAGGGAACAGAGTGGGTGCTTCCAACACCCTCAGTGCCAGCAGGTaGGACCCCAGGCCCAGCGCG | + |
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Preference number: 5 (lower is better) Translates to: LERLVNPATGNRVGASNTLSASR*DPRPSA Trigger: CGCGCTGGGCCTGGGGTCCAACCTGCTGGCACTGAG...GGTGTTGGAAGCACCCACTCTGTTCCCTGTAGCTGGGTTCACCAACCTCTCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| CDS GCA 90 bp | AGCTGCCCAGAGAAGCTCATGACAGGTGGTGTCTGCAACAAAGTCTaGATGATGAAGACCAGCAAGGGCATCCAACACACCGTGGCCACC | + |
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Preference number: 5 (lower is better) Translates to: SCPEKLMTGGVCNKV*MMKTSKGIQHTVAT Trigger: GGTGGCCACGGTGTGTTGGATGCCCTTGCTGGTCTTCATCATGCAGACTTTGTTGCAGACACCACCTGTCATGAGCTTCTCTGGGCAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| CDS GCA 90 bp | GTGGCCCGCAACAGCTGCCCAGAGAAGCTCATGACAGGTGGTGTCTaGAACAAAGTCTGCATGATGAAGACCAGCAAGGGCATCCAACAC | + |
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Preference number: 5 (lower is better) Translates to: VARNSCPEKLMTGGV*NKVCMMKTSKGIQH Trigger: GTGTTGGATGCCCTTGCTGGTCTTCATCATGCAGACTTTGTTGCAGACACCACCTGTCATGAGCTTCTCTGGGCAGCTGTTGCGGGCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| CDS CCA 90 bp | GTGCTCTGTGGCCCGCAACAGCTGCCCAGAGAAGCTCATGACAGGTaGTGTCTGCAACAAAGTCTGCATGATGAAGACCAGCAAGGGCAT | + |
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Preference number: 5 (lower is better) Translates to: VLCGPQQLPREAHDR*CLQQSLHDEDQQGH Trigger: ATGCCCTTGCTGGTCTTCATCATGCAGACTTTGTTGCAGACACCACCTGTCATGAGCTTCTCTGGGCAGCTGTTGCGGGCCACAGAGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| CDS TCA 72 bp | GAGGCCGGCGCAAGGACACAGCCTGGAGCTGTGAACTaGACCGCGGATGCAGGCGCCGGAGCACAGACCGGC | + |
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Preference number: 6 (lower is better) Translates to: EAGARTQPGAVN*TADAGAGAQTG Trigger: GCCGGTCTGTGCTCCGGCGCCTGCATCCGCGGTTCAGTTCACAGCTCCAGGCTGTGTCCTTGCGCCGGCCTC 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| CDS TCA 72 bp | GGCTGGAGGCCGGCGCAAGGACACAGCCTGGAGCTGTaGACTGAACCGCGGATGCAGGCGCCGGAGCACAGA | + |
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Preference number: 6 (lower is better) Translates to: GWRPAQGHSLEL*TEPRMQAPEHR Trigger: TCTGTGCTCCGGCGCCTGCATCCGCGGTTCAGTTCACAGCTCCAGGCTGTGTCCTTGCGCCGGCCTCCAGCC 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| CDS GCA 72 bp | CAGGAGGGACAGCCCCACGGACGCGCTGCCCAGGAGTaGGAATATGAGCCCGAAGACCACGTCACCGCGCTG | + |
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Preference number: 6 (lower is better) Translates to: QEGQPHGRAAQE*EYEPEDHVTAL Trigger: CAGCGCGGTGACGTGGTCTTCGGGCTCATATTCGCACTCCTGGGCAGCGCGTCCGTGGGGCTGTCCCTCCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| CDS CCA 72 bp | CCATCATCTCCACCTCGCAGTCCCGTGGGCGCTGTGTaGCCTCGCGCGTGTGGTAGACCCGGCAGAGTGTGG | + |
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Preference number: 6 (lower is better) Translates to: PSSPPRSPVGAV*PRACGRPGRVW Trigger: CCACACTCTGCCGGGTCTACCACACGCGCGAGGCCACACAGCGCCCACGGGACTGCGAGGTGGAGATGATGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| CDS CCA 72 bp | CACGAGCTGAACCATCATCTCCACCTCGCAGTCCCGTaGGCGCTGTGTGGCCTCGCGCGTGTGGTAGACCCG | + |
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Preference number: 6 (lower is better) Translates to: HELNHHLHLAVP*ALCGLARVVDP Trigger: CGGGTCTACCACACGCGCGAGGCCACACAGCGCCCACGGGACTGCGAGGTGGAGATGATGGTTCAGCTCGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| CDS GCA 72 bp | AAGGACACAGCCTGGAGCTGTGAACTGAACCGCGGATaGAGGCGCCGGAGCACAGACCGGCGAAAGAGGATA | + |
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Preference number: 6 (lower is better) Translates to: KDTAWSCELNRG*RRRSTDRRKRI Trigger: TATCCTCTTTCGCCGGTCTGTGCTCCGGCGCCTGCATCCGCGGTTCAGTTCACAGCTCCAGGCTGTGTCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| CDS GCA 72 bp | AACAGCTGCCCAGAGAAGCTCATGACAGGTGGTGTCTaGAACAAAGTCTGCATGATGAAGACCAGCAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: NSCPEKLMTGGV*NKVCMMKTSKG Trigger: GCCCTTGCTGGTCTTCATCATGCAGACTTTGTTGCAGACACCACCTGTCATGAGCTTCTCTGGGCAGCTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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| CDS GCA 72 bp | GAGAAGCTCATGACAGGTGGTGTCTGCAACAAAGTCTaGATGATGAAGACCAGCAAGGGCATCCAACACACC | + |
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Preference number: 6 (lower is better) Translates to: EKLMTGGVCNKV*MMKTSKGIQHT Trigger: GGTGTGTTGGATGCCCTTGCTGGTCTTCATCATGCAGACTTTGTTGCAGACACCACCTGTCATGAGCTTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105325.4 ENSMUST00000220312.2 |
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