Pregenerated sensors for TBX6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030699Ensembl transcript IDs: ENSMUST00000094037.5, ENSMUST00000172352.8
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CAGGCAGAGGCTCCCTCCATTCGCACTAAGGTGAGAGCTGAGGGGAAGCAGGCCCGGATGCTACCAGGCTaGGGGAAGGGAGCTGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: QAEAPSIRTKVRAEGKQARMLPG*GKGAGG Trigger: TCCTCCAGCTCCCTTCCCCCAGCCTGGTAGCATCCG...GGCCTGCTTCCCCTCAGCTCTCACCTTAGTGCGAATGGAGGGAGCCTCTGCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094037.5 |
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| 3UTR-3UTR CCA 90 bp | AAATTGGCATGGCTTGCACTAGTAACAAGGCCCCCAGGAGGTGGGGGTACTGGGGAAGCAGGCCCCAGCTaGACTCAGAGCTGCCTTGCC | + |
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Preference number: 2 (lower is better) Translates to: KLAWLALVTRPPGGGGTGEAGPS*TQSCLA Trigger: GGCAAGGCAGCTCTGAGTCCAGCTGGGGCCTGCTTC...CCCAGTACCCCCACCTCCTGGGGGCCTTGTTACTAGTGCAAGCCATGCCAATTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000094037.5 |
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| 3UTR-3UTR GCA 90 bp | TTGGCATGGCTTGCACTAGTAACAAGGCCCCCAGGAGGTGGGGGTACTGGGCTGGACTCAGAGCTGCCTTaGCTGAGCTTTGAAGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: LAWLALVTRPPGGGGTGLDSELP*LSFEAR Trigger: TCTGGCTTCAAAGCTCAGGCAAGGCAGCTCTGAGTC...CAGCCCAGTACCCCCACCTCCTGGGGGCCTTGTTACTAGTGCAAGCCATGCCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000094037.5 |
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| 3UTR TCA 72 bp | TTGGCCAGGCAGAGGCTCCCTCCATTCGCACTAAGGTaGGAGCTGAGGGGAAGCAGGCCCCAGCTGGACTCA | + |
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Preference number: 3 (lower is better) Translates to: LARQRLPPFALR*ELRGSRPQLDS Trigger: TGAGTCCAGCTGGGGCCTGCTTCCCCTCAGCTCTCACCTTAGTGCGAATGGAGGGAGCCTCTGCCTGGCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094037.5 |
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| 3UTR CCA 72 bp | GAGGGGGATACCACTTCAATGCGGATGCTACCAGGCTaGGGGAAGGGAGCTGGAGGATCAAGGGAAGATGGC | + |
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Preference number: 3 (lower is better) Translates to: EGDTTSMRMLPG*GKGAGGSREDG Trigger: GCCATCTTCCCTTGATCCTCCAGCTCCCTTCCCCCAGCCTGGTAGCATCCGCATTGAAGTGGTATCCCCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS-3UTR CCA 90 bp | GGAGGGGGATACCACTTCAATGCGGATGCTACCAGGCTGGGGGAAGGGAGCTGGGGGCAGGTGGGAAGGTaGAGTCTGCCCCAGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: GGGYHFNADATRLGEGSWGQVGR*SLPQAG Trigger: CCCAGCCTGGGGCAGACTCCACCTTCCCACCTGCCC...CCAGCTCCCTTCCCCCAGCCTGGTAGCATCCGCATTGAAGTGGTATCCCCCTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS-3UTR CCA 90 bp | CAGGCAGAGGCTCCCTCCATTCGCACTAAGGTGAGAGCTGAGGGGAAGCAGGCCCTTGGCTCCCAGTGCTaGCCCTGCCAGCGGTATCGG | + |
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Preference number: 4 (lower is better) Translates to: QAEAPSIRTKVRAEGKQALGSQC*PCQRYR Trigger: CCGATACCGCTGGCAGGGCCAGCACTGGGAGCCAAG...GGCCTGCTTCCCCTCAGCTCTCACCTTAGTGCGAATGGAGGGAGCCTCTGCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094037.5 |
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| CDS-3UTR CCA 90 bp | GGAGGGGGATACCACTTCAATGCGGATGCTACCAGGCTGGGGGAAGGGAGCTGGGGTAGGCCTCAGCACTaGGGCCCCCACATGGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: GGGYHFNADATRLGEGSWGRPQH*GPHMEE Trigger: CTCCTCCATGTGGGGGCCCCAGTGCTGAGGCCTACC...CCAGCTCCCTTCCCCCAGCCTGGTAGCATCCGCATTGAAGTGGTATCCCCCTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS-3UTR GCA 90 bp | TTGGCATGGCTTGCACTAGTAACAAGGCCCCCAGGAGGTGGGGGTACTGGGCTGTGGGAAGGTGGAGTCTaGCCCAGGCTGGGGGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: LAWLALVTRPPGGGGTGLWEGGV*PRLGVS Trigger: GGACACCCCCAGCCTGGGGCAGACTCCACCTTCCCA...CAGCCCAGTACCCCCACCTCCTGGGGGCCTTGTTACTAGTGCAAGCCATGCCAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000094037.5 |
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| CDS-3UTR GCA 90 bp | GAGGGGGATACCACTTCAATGCGGATGCTACCAGGCTGGGGGAAGGGAGCTGGATGGGAAGGTGGAGTCTaGCCCAGGCTGGGGGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: EGDTTSMRMLPGWGKGAGWEGGV*PRLGVS Trigger: GGACACCCCCAGCCTGGGGCAGACTCCACCTTCCCA...TCCAGCTCCCTTCCCCCAGCCTGGTAGCATCCGCATTGAAGTGGTATCCCCCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS-3UTR GCA 90 bp | GAGGGGGATACCACTTCAATGCGGATGCTACCAGGCTGGGGGAAGGGAGCTGGAGGGCAAAGGAGCGGCTaGAGCCAGAGTGTGGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: EGDTTSMRMLPGWGKGAGGQRSG*SQSVGS Trigger: GCTCCCCACACTCTGGCTGCAGCCGCTCCTTTGCCC...TCCAGCTCCCTTCCCCCAGCCTGGTAGCATCCGCATTGAAGTGGTATCCCCCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS-3UTR CCA 90 bp | TTGGCATGGCTTGCACTAGTAACAAGGCCCCCAGGAGGTGGGGGTACTGGGCTGCGAGTGAAGGGCCTCTaGGGGTGGCGGTGCTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: LAWLALVTRPPGGGGTGLRVKGL*GWRCCL Trigger: GAGACAGCACCGCCACCCCCAGAGGCCCTTCACTCG...CAGCCCAGTACCCCCACCTCCTGGGGGCCTTGTTACTAGTGCAAGCCATGCCAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000094037.5 |
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| CDS-3UTR CCA 90 bp | GGAGGGGGATACCACTTCAATGCGGATGCTACCAGGCTGGGGGAAGGGAGCTGGGCAGAAGCAGCTTCCTaGGGGGTTGGGGCCTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: GGGYHFNADATRLGEGSWAEAAS*GVGACS Trigger: AGAGCAGGCCCCAACCCCCCAGGAAGCTGCTTCTGC...CCAGCTCCCTTCCCCCAGCCTGGTAGCATCCGCATTGAAGTGGTATCCCCCTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS-3UTR CCA 90 bp | GAGGGGGATACCACTTCAATGCGGATGCTACCAGGCTGGGGGAAGGGAGCTGGAGGTAGGCCTCAGCACTaGGGCCCCCACATGGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: EGDTTSMRMLPGWGKGAGGRPQH*GPHMEE Trigger: CTCCTCCATGTGGGGGCCCCAGTGCTGAGGCCTACC...TCCAGCTCCCTTCCCCCAGCCTGGTAGCATCCGCATTGAAGTGGTATCCCCCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS-3UTR TCA 90 bp | GAGGCTCCCTCCATTCGCACTAAGGTGAGAGCTGAGGGGAAGCAGGCCCCAGCTCTGGGTCCAGGCCAGTaGCTGATACTCGGCAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: EAPSIRTKVRAEGKQAPALGPGQ*LILGKQ Trigger: CTGCTTGCCGAGTATCAGTCACTGGCCTGGACCCAG...AGCTGGGGCCTGCTTCCCCTCAGCTCTCACCTTAGTGCGAATGGAGGGAGCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094037.5 |
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| CDS-3UTR TCA 90 bp | CAGGCAGAGGCTCCCTCCATTCGCACTAAGGTGAGAGCTGAGGGGAAGCAGGCCCCCACATGGAGGAGCTaGGGCAGAAGCAGCTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: QAEAPSIRTKVRAEGKQAPTWRS*GRSSFL Trigger: CAGGAAGCTGCTTCTGCCTCAGCTCCTCCATGTGGG...GGCCTGCTTCCCCTCAGCTCTCACCTTAGTGCGAATGGAGGGAGCCTCTGCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094037.5 |
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| CDS-3UTR TCA 90 bp | GGAGGGGGATACCACTTCAATGCGGATGCTACCAGGCTGGGGGAAGGGAGCTGGCCCACATGGAGGAGCTaGGGCAGAAGCAGCTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: GGGYHFNADATRLGEGSWPTWRS*GRSSFL Trigger: CAGGAAGCTGCTTCTGCCTCAGCTCCTCCATGTGGG...CCAGCTCCCTTCCCCCAGCCTGGTAGCATCCGCATTGAAGTGGTATCCCCCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS-3UTR GCA 90 bp | TTGGCATGGCTTGCACTAGTAACAAGGCCCCCAGGAGGTGGGGGTACTGGGCTGCCACTTGGCTCCCAGTaGTGGCCCTGCCAGCGGTAT | + |
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Preference number: 4 (lower is better) Translates to: LAWLALVTRPPGGGGTGLPLGSQ*WPCQRY Trigger: ATACCGCTGGCAGGGCCAGCACTGGGAGCCAAGTGG...CAGCCCAGTACCCCCACCTCCTGGGGGCCTTGTTACTAGTGCAAGCCATGCCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000094037.5 |
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| CDS-3UTR GCA 90 bp | GGAGGGGGATACCACTTCAATGCGGATGCTACCAGGCTGGGGGAAGGGAGCTGGTGGAAGGATACGGGCTaGCGCATCCAGTGGGCACCA | + |
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Preference number: 4 (lower is better) Translates to: GGGYHFNADATRLGEGSWWKDTG*RIQWAP Trigger: TGGTGCCCACTGGATGCGGCAGCCCGTATCCTTCCA...CCAGCTCCCTTCCCCCAGCCTGGTAGCATCCGCATTGAAGTGGTATCCCCCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS-3UTR CCA 90 bp | GGGGAAGGGAGCTGGAGGATCAAGGGAAGATGGCATAGGGTTACTACACCGAGGGGGCAGGTGGGAAGGTaGAGTCTGCCCCAGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: GEGSWRIKGRWHRVTTPRGQVGR*SLPQAG Trigger: CCCAGCCTGGGGCAGACTCCACCTTCCCACCTGCCC...CCTCGGTGTAGTAACCCTATGCCATCTTCCCTTGATCCTCCAGCTCCCTTCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS-3UTR CCA 90 bp | GAGGCTCCCTCCATTCGCACTAAGGTGAGAGCTGAGGGGAAGCAGGCCCCAGCTGTCACAGGGACCCCCTaGTGTATCCCCACTCCCACA | + |
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Preference number: 4 (lower is better) Translates to: EAPSIRTKVRAEGKQAPAVTGTP*CIPTPT Trigger: TGTGGGAGTGGGGATACACCAGGGGGTCCCTGTGAC...AGCTGGGGCCTGCTTCCCCTCAGCTCTCACCTTAGTGCGAATGGAGGGAGCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000094037.5 |
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| CDS-3UTR TCA 90 bp | GAGGGGGATACCACTTCAATGCGGATGCTACCAGGCTGGGGGAAGGGAGCTGGACTGGGTCCAGGCCAGTaGCTGATACTCGGCAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: EGDTTSMRMLPGWGKGAGLGPGQ*LILGKQ Trigger: CTGCTTGCCGAGTATCAGTCACTGGCCTGGACCCAG...TCCAGCTCCCTTCCCCCAGCCTGGTAGCATCCGCATTGAAGTGGTATCCCCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS-3UTR TCA 90 bp | GAGGCTCCCTCCATTCGCACTAAGGTGAGAGCTGAGGGGAAGCAGGCCCCAGCTAGGGACCCCCTTGGATaGAGTGTGGGGCAAAGGATG | + |
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Preference number: 4 (lower is better) Translates to: EAPSIRTKVRAEGKQAPARDPLG*SVGQRM Trigger: CATCCTTTGCCCCACACTTCATCCAAGGGGGTCCCT...AGCTGGGGCCTGCTTCCCCTCAGCTCTCACCTTAGTGCGAATGGAGGGAGCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000094037.5 |
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| CDS-3UTR GCA 90 bp | GGGGAAGGGAGCTGGAGGATCAAGGGAAGATGGCATAGGGTTACTACACCGAGGGGGCAAAGGAGCGGCTaGAGCCAGAGTGTGGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: GEGSWRIKGRWHRVTTPRGQRSG*SQSVGS Trigger: GCTCCCCACACTCTGGCTGCAGCCGCTCCTTTGCCC...CCTCGGTGTAGTAACCCTATGCCATCTTCCCTTGATCCTCCAGCTCCCTTCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS-3UTR CCA 90 bp | GGGGAAGGGAGCTGGAGGATCAAGGGAAGATGGCATAGGGTTACTACACCGAGGCTTGGCTCCCAGTGCTaGCCCTGCCAGCGGTATCGG | + |
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Preference number: 4 (lower is better) Translates to: GEGSWRIKGRWHRVTTPRLGSQC*PCQRYR Trigger: CCGATACCGCTGGCAGGGCCAGCACTGGGAGCCAAG...CCTCGGTGTAGTAACCCTATGCCATCTTCCCTTGATCCTCCAGCTCCCTTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS-3UTR CCA 90 bp | GGAGGGGGATACCACTTCAATGCGGATGCTACCAGGCTGGGGGAAGGGAGCTGGGGCTGCATAGTTGGGTaGCTCTCACCAGGTGGATGC | + |
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Preference number: 4 (lower is better) Translates to: GGGYHFNADATRLGEGSWGCIVG*LSPGGC Trigger: GCATCCACCTGGTGAGAGCCACCCAACTATGCAGCC...CCAGCTCCCTTCCCCCAGCCTGGTAGCATCCGCATTGAAGTGGTATCCCCCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS-3UTR TCA 90 bp | TTGGCATGGCTTGCACTAGTAACAAGGCCCCCAGGAGGTGGGGGTACTGGGCTGTCTCCAAGCTCAGGCTaGCCCCAGGAAGCGAGTGAA | + |
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Preference number: 4 (lower is better) Translates to: LAWLALVTRPPGGGGTGLSPSSG*PQEASE Trigger: TTCACTCGCTTCCTGGGGTCAGCCTGAGCTTGGAGA...CAGCCCAGTACCCCCACCTCCTGGGGGCCTTGTTACTAGTGCAAGCCATGCCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000094037.5 |
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| CDS-3UTR TCA 90 bp | GAGGGGGATACCACTTCAATGCGGATGCTACCAGGCTGGGGGAAGGGAGCTGGATCTCCAAGCTCAGGCTaGCCCCAGGAAGCGAGTGAA | + |
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Preference number: 4 (lower is better) Translates to: EGDTTSMRMLPGWGKGAGSPSSG*PQEASE Trigger: TTCACTCGCTTCCTGGGGTCAGCCTGAGCTTGGAGA...TCCAGCTCCCTTCCCCCAGCCTGGTAGCATCCGCATTGAAGTGGTATCCCCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS-3UTR TCA 90 bp | CAGGCAGAGGCTCCCTCCATTCGCACTAAGGTGAGAGCTGAGGGGAAGCAGGCCCTGTCCCCACAGCGCTaGATTCCTTCCACAGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: QAEAPSIRTKVRAEGKQALSPQR*IPSTVP Trigger: AGGAACTGTGGAAGGAATTCAGCGCTGTGGGGACAG...GGCCTGCTTCCCCTCAGCTCTCACCTTAGTGCGAATGGAGGGAGCCTCTGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094037.5 |
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| CDS-3UTR TCA 90 bp | GGAGGGGGATACCACTTCAATGCGGATGCTACCAGGCTGGGGGAAGGGAGCTGGCTGTCCCCACAGCGCTaGATTCCTTCCACAGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: GGGYHFNADATRLGEGSWLSPQR*IPSTVP Trigger: AGGAACTGTGGAAGGAATTCAGCGCTGTGGGGACAG...CCAGCTCCCTTCCCCCAGCCTGGTAGCATCCGCATTGAAGTGGTATCCCCCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS-3UTR TCA 90 bp | GAGGGGGATACCACTTCAATGCGGATGCTACCAGGCTGGGGGAAGGGAGCTGGAAGGGACCCCCTTGGATaGAGTGTGGGGCAAAGGATG | + |
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Preference number: 4 (lower is better) Translates to: EGDTTSMRMLPGWGKGAGRDPLG*SVGQRM Trigger: CATCCTTTGCCCCACACTTCATCCAAGGGGGTCCCT...TCCAGCTCCCTTCCCCCAGCCTGGTAGCATCCGCATTGAAGTGGTATCCCCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS-3UTR GCA 90 bp | TTGGCATGGCTTGCACTAGTAACAAGGCCCCCAGGAGGTGGGGGTACTGGGCTGTGGTACAGATGGAGCTaGCTGATAGGCAGAGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: LAWLALVTRPPGGGGTGLWYRWS*LIGRAP Trigger: GGGGGCTCTGCCTATCAGGCAGCTCCATCTGTACCA...CAGCCCAGTACCCCCACCTCCTGGGGGCCTTGTTACTAGTGCAAGCCATGCCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000094037.5 |
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| CDS-3UTR GCA 90 bp | GAGGGGGATACCACTTCAATGCGGATGCTACCAGGCTGGGGGAAGGGAGCTGGATGGTACAGATGGAGCTaGCTGATAGGCAGAGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: EGDTTSMRMLPGWGKGAGWYRWS*LIGRAP Trigger: GGGGGCTCTGCCTATCAGGCAGCTCCATCTGTACCA...TCCAGCTCCCTTCCCCCAGCCTGGTAGCATCCGCATTGAAGTGGTATCCCCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS-3UTR CCA 90 bp | CTGGACTCAGAGCTGCCTTGCCTGAGCTTTGAAGCCAGAGGGGGTGGAGTGAAACTCTGTCAGGGCAGGTaGGAAGGTGGAGTCTGCCCC | + |
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Preference number: 4 (lower is better) Translates to: LDSELPCLSFEARGGGVKLCQGR*EGGVCP Trigger: GGGGCAGACTCCACCTTCCCACCTGCCCTGACAGAG...TTTCACTCCACCCCCTCTGGCTTCAAAGCTCAGGCAAGGCAGCTCTGAGTCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094037.5 |
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| CDS-3UTR CCA 90 bp | GGGGAAGGGAGCTGGAGGATCAAGGGAAGATGGCATAGGGTTACTACACCGAGGCTCTGTCAGGGCAGGTaGGAAGGTGGAGTCTGCCCC | + |
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Preference number: 4 (lower is better) Translates to: GEGSWRIKGRWHRVTTPRLCQGR*EGGVCP Trigger: GGGGCAGACTCCACCTTCCCACCTGCCCTGACAGAG...CCTCGGTGTAGTAACCCTATGCCATCTTCCCTTGATCCTCCAGCTCCCTTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS-3UTR CCA 90 bp | GAGGGGGATACCACTTCAATGCGGATGCTACCAGGCTGGGGGAAGGGAGCTGGATCCAGTGGGCACCAGTaGCAGGAGAGTCAGGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: EGDTTSMRMLPGWGKGAGSSGHQ*QESQGE Trigger: TTCACCCTGACTCTCCTGCCACTGGTGCCCACTGGA...TCCAGCTCCCTTCCCCCAGCCTGGTAGCATCCGCATTGAAGTGGTATCCCCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS-3UTR CCA 90 bp | GAGGCTCCCTCCATTCGCACTAAGGTGAGAGCTGAGGGGAAGCAGGCCCCAGCTTGTTGGCTGCATAGTTaGGTGGCTCTCACCAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: EAPSIRTKVRAEGKQAPACWLHS*VALTRW Trigger: CCACCTGGTGAGAGCCACCCAACTATGCAGCCAACA...AGCTGGGGCCTGCTTCCCCTCAGCTCTCACCTTAGTGCGAATGGAGGGAGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094037.5 |
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| CDS-3UTR CCA 90 bp | GGGGAAGGGAGCTGGAGGATCAAGGGAAGATGGCATAGGGTTACTACACCGAGGGCAGAAGCAGCTTCCTaGGGGGTTGGGGCCTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: GEGSWRIKGRWHRVTTPRAEAAS*GVGACS Trigger: AGAGCAGGCCCCAACCCCCCAGGAAGCTGCTTCTGC...CCTCGGTGTAGTAACCCTATGCCATCTTCCCTTGATCCTCCAGCTCCCTTCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS-3UTR CCA 90 bp | GGAGGGGGATACCACTTCAATGCGGATGCTACCAGGCTGGGGGAAGGGAGCTGGGTGTGGGGCAAAGGATaGTACAGATGGAGCTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: GGGYHFNADATRLGEGSWVWGKG*YRWSCL Trigger: CAGGCAGCTCCATCTGTACCATCCTTTGCCCCACAC...CCAGCTCCCTTCCCCCAGCCTGGTAGCATCCGCATTGAAGTGGTATCCCCCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS-3UTR GCA 90 bp | GGGGAAGGGAGCTGGAGGATCAAGGGAAGATGGCATAGGGTTACTACACCGAGGTGGAAGGATACGGGCTaGCGCATCCAGTGGGCACCA | + |
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Preference number: 4 (lower is better) Translates to: GEGSWRIKGRWHRVTTPRWKDTG*RIQWAP Trigger: TGGTGCCCACTGGATGCGGCAGCCCGTATCCTTCCA...CCTCGGTGTAGTAACCCTATGCCATCTTCCCTTGATCCTCCAGCTCCCTTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS-3UTR GCA 90 bp | GAGGGGGATACCACTTCAATGCGGATGCTACCAGGCTGGGGGAAGGGAGCTGGACTCTCACCAGGTGGATaGGAGGCTGGTACTTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: EGDTTSMRMLPGWGKGAGLSPGG*EAGTCA Trigger: TGCACAAGTACCAGCCTCGCATCCACCTGGTGAGAG...TCCAGCTCCCTTCCCCCAGCCTGGTAGCATCCGCATTGAAGTGGTATCCCCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS-3UTR CCA 90 bp | GGAGGGGGATACCACTTCAATGCGGATGCTACCAGGCTGGGGGAAGGGAGCTGGTCCTTCCACAGTTCCTaGTTCTCCAAGCTCAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: GGGYHFNADATRLGEGSWSFHSS*FSKLRL Trigger: CAGCCTGAGCTTGGAGAACCAGGAACTGTGGAAGGA...CCAGCTCCCTTCCCCCAGCCTGGTAGCATCCGCATTGAAGTGGTATCCCCCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS-3UTR CCA 90 bp | TTGGCATGGCTTGCACTAGTAACAAGGCCCCCAGGAGGTGGGGGTACTGGGCTGAAGATCAGGTGGCCATaGGGGTCCAGTGTGCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: LAWLALVTRPPGGGGTGLKIRWP*GSSVLL Trigger: CAACAGCACACTGGACCCCCATGGCCACCTGATCTT...CAGCCCAGTACCCCCACCTCCTGGGGGCCTTGTTACTAGTGCAAGCCATGCCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000094037.5 |
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| CDS-3UTR CCA 90 bp | GAGGGGGATACCACTTCAATGCGGATGCTACCAGGCTGGGGGAAGGGAGCTGGATGTTGGCTGCATAGTTaGGTGGCTCTCACCAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: EGDTTSMRMLPGWGKGAGCWLHS*VALTRW Trigger: CCACCTGGTGAGAGCCACCCAACTATGCAGCCAACA...TCCAGCTCCCTTCCCCCAGCCTGGTAGCATCCGCATTGAAGTGGTATCCCCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS-3UTR CCA 90 bp | GGAGGGGGATACCACTTCAATGCGGATGCTACCAGGCTGGGGGAAGGGAGCTGGGTCACAGGGACCCCCTaGTGTATCATCATGTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GGGYHFNADATRLGEGSWVTGTP*CIIMFL Trigger: CAGGAACATGATGATACACCAGGGGGTCCCTGTGAC...CCAGCTCCCTTCCCCCAGCCTGGTAGCATCCGCATTGAAGTGGTATCCCCCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000172352.8 |
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| CDS-3UTR TCA 90 bp | AAATTGGCATGGCTTGCACTAGTAACAAGGCCCCCAGGAGGTGGGGGTACTGGGGTCCAGGCCAGTGACTaGTACTCGGCAAGCAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KLAWLALVTRPPGGGGTGVQASD*YSASRE Trigger: TTCCCTGCTTGCCGAGTATCAGTCACTGGCCTGGAC...CCCAGTACCCCCACCTCCTGGGGGCCTTGTTACTAGTGCAAGCCATGCCAATTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000094037.5 |
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| CDS-3UTR GCA 90 bp | GGAGGGGGATACCACTTCAATGCGGATGCTACCAGGCTGGGGGAAGGGAGCTGGGGCAAAGGGATTGGCTaGGATCTTCAGCTGTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GGGYHFNADATRLGEGSWGKGIG*DLQLCD Trigger: ATCACACAGCTGAAGATCGCAGCCAATCCCTTTGCC...CCAGCTCCCTTCCCCCAGCCTGGTAGCATCCGCATTGAAGTGGTATCCCCCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS-3UTR CCA 90 bp | CTGGACTCAGAGCTGCCTTGCCTGAGCTTTGAAGCCAGAGGGGGTGGAGTGAAATCCAGTGGGCACCAGTaGCAGGAGAGTCAGGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LDSELPCLSFEARGGGVKSSGHQ*QESQGE Trigger: TTCACCCTGACTCTCCTGCCACTGGTGCCCACTGGA...TTTCACTCCACCCCCTCTGGCTTCAAAGCTCAGGCAAGGCAGCTCTGAGTCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094037.5 |
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| CDS-3UTR CCA 90 bp | GGGGAAGGGAGCTGGAGGATCAAGGGAAGATGGCATAGGGTTACTACACCGAGGGGCTGCATAGTTGGGTaGCTCTCACCAGGTGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: GEGSWRIKGRWHRVTTPRGCIVG*LSPGGC Trigger: GCATCCACCTGGTGAGAGCCACCCAACTATGCAGCC...CCTCGGTGTAGTAACCCTATGCCATCTTCCCTTGATCCTCCAGCTCCCTTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS-3UTR CCA 90 bp | CTGGACTCAGAGCTGCCTTGCCTGAGCTTTGAAGCCAGAGGGGGTGGAGTGAAATGTGGCCACTGGCTCTaGGCCCCGAAGTTTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LDSELPCLSFEARGGGVKCGHWL*APKFPL Trigger: AAGAGGAAACTTCGGGGCCCAGAGCCAGTGGCCACA...TTTCACTCCACCCCCTCTGGCTTCAAAGCTCAGGCAAGGCAGCTCTGAGTCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094037.5 |
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| CDS-3UTR GCA 90 bp | AAATTGGCATGGCTTGCACTAGTAACAAGGCCCCCAGGAGGTGGGGGTACTGGGCTCTCACCAGGTGGATaGGAGGCTGGTACTTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KLAWLALVTRPPGGGGTGLSPGG*EAGTCA Trigger: TGCACAAGTACCAGCCTCGCATCCACCTGGTGAGAG...CCCAGTACCCCCACCTCCTGGGGGCCTTGTTACTAGTGCAAGCCATGCCAATTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000094037.5 |
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| CDS-3UTR CCA 90 bp | GGGGAAGGGAGCTGGAGGATCAAGGGAAGATGGCATAGGGTTACTACACCGAGGAAGATCAGGTGGCCATaGGGGTCCAGTGTGCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GEGSWRIKGRWHRVTTPRKIRWP*GSSVLL Trigger: CAACAGCACACTGGACCCCCATGGCCACCTGATCTT...CCTCGGTGTAGTAACCCTATGCCATCTTCCCTTGATCCTCCAGCTCCCTTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS-3UTR CCA 90 bp | GGAGGGGGATACCACTTCAATGCGGATGCTACCAGGCTGGGGGAAGGGAGCTGGAAAGGATGGTACAGATaGAGCTGCCTGATAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GGGYHFNADATRLGEGSWKGWYR*SCLIGR Trigger: TCTGCCTATCAGGCAGCTCCATCTGTACCATCCTTT...CCAGCTCCCTTCCCCCAGCCTGGTAGCATCCGCATTGAAGTGGTATCCCCCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS-3UTR CCA 90 bp | CTGGACTCAGAGCTGCCTTGCCTGAGCTTTGAAGCCAGAGGGGGTGGAGTGAAAGTGTGGGGCAAAGGATaGTACAGATGGAGCTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LDSELPCLSFEARGGGVKVWGKG*YRWSCL Trigger: CAGGCAGCTCCATCTGTACCATCCTTTGCCCCACAC...TTTCACTCCACCCCCTCTGGCTTCAAAGCTCAGGCAAGGCAGCTCTGAGTCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094037.5 |
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| CDS-3UTR TCA 90 bp | GGAGGGGGATACCACTTCAATGCGGATGCTACCAGGCTGGGGGAAGGGAGCTGGCATTCCCTGAATGAATaGTGCCCACCTCTTACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GGGYHFNADATRLGEGSWHSLNE*CPPLTV Trigger: AACTGTAAGAGGTGGGCATCATTCATTCAGGGAATG...CCAGCTCCCTTCCCCCAGCCTGGTAGCATCCGCATTGAAGTGGTATCCCCCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000172352.8 |
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| CDS-3UTR CCA 90 bp | GGGGAAGGGAGCTGGAGGATCAAGGGAAGATGGCATAGGGTTACTACACCGAGGTCCTTCCACAGTTCCTaGTTCTCCAAGCTCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GEGSWRIKGRWHRVTTPRSFHSS*FSKLRL Trigger: CAGCCTGAGCTTGGAGAACCAGGAACTGTGGAAGGA...CCTCGGTGTAGTAACCCTATGCCATCTTCCCTTGATCCTCCAGCTCCCTTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS-3UTR TCA 90 bp | GAGGGGGATACCACTTCAATGCGGATGCTACCAGGCTGGGGGAAGGGAGCTGGATTAGTAAGCATTCCCTaGATGAATGATGCCCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: EGDTTSMRMLPGWGKGAGLVSIP*MNDAHL Trigger: GAGGTGGGCATCATTCATTCAGGGAATGCTTACTAA...TCCAGCTCCCTTCCCCCAGCCTGGTAGCATCCGCATTGAAGTGGTATCCCCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000172352.8 |
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| CDS-3UTR GCA 90 bp | GGGGAAGGGAGCTGGAGGATCAAGGGAAGATGGCATAGGGTTACTACACCGAGGGGCAAAGGGATTGGCTaGGATCTTCAGCTGTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GEGSWRIKGRWHRVTTPRGKGIG*DLQLCD Trigger: ATCACACAGCTGAAGATCGCAGCCAATCCCTTTGCC...CCTCGGTGTAGTAACCCTATGCCATCTTCCCTTGATCCTCCAGCTCCCTTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS-3UTR CCA 90 bp | AAATTGGCATGGCTTGCACTAGTAACAAGGCCCCCAGGAGGTGGGGGTACTGGGCTTTGGCAAAGGGATTaGCTGCGATCTTCAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KLAWLALVTRPPGGGGTGLWQRD*LRSSAV Trigger: CACAGCTGAAGATCGCAGCCAATCCCTTTGCCAAAG...CCCAGTACCCCCACCTCCTGGGGGCCTTGTTACTAGTGCAAGCCATGCCAATTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000094037.5 |
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| CDS-3UTR CCA 90 bp | GGGGAAGGGAGCTGGAGGATCAAGGGAAGATGGCATAGGGTTACTACACCGAGGCTTTGGCAAAGGGATTaGCTGCGATCTTCAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GEGSWRIKGRWHRVTTPRLWQRD*LRSSAV Trigger: CACAGCTGAAGATCGCAGCCAATCCCTTTGCCAAAG...CCTCGGTGTAGTAACCCTATGCCATCTTCCCTTGATCCTCCAGCTCCCTTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS-3UTR TCA 90 bp | AAATTGGCATGGCTTGCACTAGTAACAAGGCCCCCAGGAGGTGGGGGTACTGGGAGGCTGTCACAGAGATaGATGTGGTCTCAGGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: KLAWLALVTRPPGGGGTGRLSQR*MWSQEI Trigger: GATTTCCTGAGACCACATTCATCTCTGTGACAGCCT...CCCAGTACCCCCACCTCCTGGGGGCCTTGTTACTAGTGCAAGCCATGCCAATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000094037.5 |
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| CDS-3UTR TCA 90 bp | GGGGAAGGGAGCTGGAGGATCAAGGGAAGATGGCATAGGGTTACTACACCGAGGAGGCTGTCACAGAGATaGATGTGGTCTCAGGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: GEGSWRIKGRWHRVTTPRRLSQR*MWSQEI Trigger: GATTTCCTGAGACCACATTCATCTCTGTGACAGCCT...CCTCGGTGTAGTAACCCTATGCCATCTTCCCTTGATCCTCCAGCTCCCTTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS-3UTR CCA 90 bp | AAATTGGCATGGCTTGCACTAGTAACAAGGCCCCCAGGAGGTGGGGGTACTGGGTTTCTCGGAAACCTTTaGCAAAGGGATTGGCTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: KLAWLALVTRPPGGGGTGFLGNL*QRDWLR Trigger: TCGCAGCCAATCCCTTTGCCAAAGGTTTCCGAGAAA...CCCAGTACCCCCACCTCCTGGGGGCCTTGTTACTAGTGCAAGCCATGCCAATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000094037.5 |
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| CDS-3UTR CCA 90 bp | GGGGAAGGGAGCTGGAGGATCAAGGGAAGATGGCATAGGGTTACTACACCGAGGTTTCTCGGAAACCTTTaGCAAAGGGATTGGCTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: GEGSWRIKGRWHRVTTPRFLGNL*QRDWLR Trigger: TCGCAGCCAATCCCTTTGCCAAAGGTTTCCGAGAAA...CCTCGGTGTAGTAACCCTATGCCATCTTCCCTTGATCCTCCAGCTCCCTTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS-3UTR CCA 90 bp | GGGGAAGGGAGCTGGAGGATCAAGGGAAGATGGCATAGGGTTACTACACCGAGGAAAGGATGGTACAGATaGAGCTGCCTGATAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GEGSWRIKGRWHRVTTPRKGWYR*SCLIGR Trigger: TCTGCCTATCAGGCAGCTCCATCTGTACCATCCTTT...CCTCGGTGTAGTAACCCTATGCCATCTTCCCTTGATCCTCCAGCTCCCTTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS CCA 90 bp | CGGTCGGGTAGGCGGGGTTCAGCCTTGCCACTTGGCTCCCAGTGCTaGCCCTGCCAGCGGTATCGGGCCCCATCCACTGGAACCACATCC | + |
|
Preference number: 5 (lower is better) Translates to: RSGRRGSALPLGSQC*PCQRYRAPSTGTTS Trigger: GGATGTGGTTCCAGTGGATGGGGCCCGATACCGCTGGCAGGGCCAGCACTGGGAGCCAAGTGGCAAGGCTGAACCCCGCCTACCCGACCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS GCA 90 bp | ACACGGTCGGGTAGGCGGGGTTCAGCCTTGCCACTTGGCTCCCAGTaGTGGCCCTGCCAGCGGTATCGGGCCCCATCCACTGGAACCACA | + |
|
Preference number: 5 (lower is better) Translates to: TRSGRRGSALPLGSQ*WPCQRYRAPSTGTT Trigger: TGTGGTTCCAGTGGATGGGGCCCGATACCGCTGGCAGGGCCAGCACTGGGAGCCAAGTGGCAAGGCTGAACCCCGCCTACCCGACCGTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS GCA 90 bp | AGTCAGGGTGAATGTAGACACGGTCGGGTAGGCGGGGTTCAGCCTTaGCACTTGGCTCCCAGTGCTGGCCCTGCCAGCGGTATCGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SQGECRHGRVGGVQP*HLAPSAGPASGIGP Trigger: GGGCCCGATACCGCTGGCAGGGCCAGCACTGGGAGCCAAGTGGCAAGGCTGAACCCCGCCTACCCGACCGTGTCTACATTCACCCTGACT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS CCA 90 bp | CCAAATCAGGGTAGCGGTAACCCTCTGTCAGGGCAGGTGGGAAGGTaGAGTCTGCCCCAGGCTGGGGGTGTCCCAGACGGTAGCCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PNQGSGNPLSGQVGR*SLPQAGGVPDGSQS Trigger: GGACTGGCTACCGTCTGGGACACCCCCAGCCTGGGGCAGACTCCACCTTCCCACCTGCCCTGACAGAGGGTTACCGCTACCCTGATTTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS CCA 90 bp | CCCTGGTGTATCCCCACTCCCACAGGCCTCTGTGGCCACTGGCTCTaGGCCCCGAAGTTTCCTCTTCACACGGGCATCCCGCTCCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PWCIPTPTGLCGHWL*APKFPLHTGIPLPL Trigger: AAGAGGGAGCGGGATGCCCGTGTGAAGAGGAAACTTCGGGGCCCAGAGCCAGTGGCCACAGAGGCCTGTGGGAGTGGGGATACACCAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094037.5 |
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| CDS-3UTR CAA 90 bp | GGAGGGGGATACCACTTCAATGCGGATGCTACCAGGCTGGGGGAAGGGAGCTGGGTTCAGCCTTGCCACTaGGCTCCCAGTGCTGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: GGGYHFNADATRLGEGSWVQPCH*APSAGP Trigger: AGGGCCAGCACTGGGAGCCAAGTGGCAAGGCTGAAC...CCAGCTCCCTTCCCCCAGCCTGGTAGCATCCGCATTGAAGTGGTATCCCCCTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS-3UTR CAA 90 bp | TTGGCATGGCTTGCACTAGTAACAAGGCCCCCAGGAGGTGGGGGTACTGGGCTGAGGCGGGGTTCAGCCTaGCCACTTGGCTCCCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LAWLALVTRPPGGGGTGLRRGSA*PLGSQC Trigger: GCACTGGGAGCCAAGTGGCAAGGCTGAACCCCGCCT...CAGCCCAGTACCCCCACCTCCTGGGGGCCTTGTTACTAGTGCAAGCCATGCCAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000094037.5 |
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| CDS-3UTR CAA 90 bp | GAGGGGGATACCACTTCAATGCGGATGCTACCAGGCTGGGGGAAGGGAGCTGGAAGGCGGGGTTCAGCCTaGCCACTTGGCTCCCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: EGDTTSMRMLPGWGKGAGRRGSA*PLGSQC Trigger: GCACTGGGAGCCAAGTGGCAAGGCTGAACCCCGCCT...TCCAGCTCCCTTCCCCCAGCCTGGTAGCATCCGCATTGAAGTGGTATCCCCCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS-3UTR CAA 90 bp | GAGGGGGATACCACTTCAATGCGGATGCTACCAGGCTGGGGGAAGGGAGCTGGAGTTCAGCCTTGCCACTaGGCTCCCAGTGCTGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: EGDTTSMRMLPGWGKGAGVQPCH*APSAGP Trigger: AGGGCCAGCACTGGGAGCCAAGTGGCAAGGCTGAAC...TCCAGCTCCCTTCCCCCAGCCTGGTAGCATCCGCATTGAAGTGGTATCCCCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS-3UTR CAA 90 bp | GGAGGGGGATACCACTTCAATGCGGATGCTACCAGGCTGGGGGAAGGGAGCTGGAGGGAAGGGACCCCCTaGGATGAAGTGTGGGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: GGGYHFNADATRLGEGSWREGTP*DEVWGK Trigger: TTTGCCCCACACTTCATCCAAGGGGGTCCCTTCCCT...CCAGCTCCCTTCCCCCAGCCTGGTAGCATCCGCATTGAAGTGGTATCCCCCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS TCA 90 bp | CCACATCCAGAAGAAACAAGTAGCGGGCCTCTGGGTCCAGGCCAGTaGCTGATACTCGGCAAGCAGGGAACATGCGCCTGCCAGCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: PHPEETSSGPLGPGQ*LILGKQGTCACQPW Trigger: CCAAGGCTGGCAGGCGCATGTTCCCTGCTTGCCGAGTATCAGTCACTGGCCTGGACCCAGAGGCCCGCTACTTGTTTCTTCTGGATGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS CCA 90 bp | AGAAGTATCCAAATCAGGGTAGCGGTAACCCTCTGTCAGGGCAGGTaGGAAGGTGGAGTCTGCCCCAGGCTGGGGGTGTCCCAGACGGTA | + |
|
Preference number: 5 (lower is better) Translates to: RSIQIRVAVTLCQGR*EGGVCPRLGVSQTV Trigger: TACCGTCTGGGACACCCCCAGCCTGGGGCAGACTCCACCTTCCCACCTGCCCTGACAGAGGGTTACCGCTACCCTGATTTGGATACTTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS-3UTR CAA 90 bp | GAGGGGGATACCACTTCAATGCGGATGCTACCAGGCTGGGGGAAGGGAGCTGGAAGGGAAGGGACCCCCTaGGATGAAGTGTGGGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: EGDTTSMRMLPGWGKGAGREGTP*DEVWGK Trigger: TTTGCCCCACACTTCATCCAAGGGGGTCCCTTCCCT...TCCAGCTCCCTTCCCCCAGCCTGGTAGCATCCGCATTGAAGTGGTATCCCCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS-3UTR CAA 90 bp | GGAGGGGGATACCACTTCAATGCGGATGCTACCAGGCTGGGGGAAGGGAGCTGGCCTTTGGCAAAGGGATaGGCTGCGATCTTCAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GGGYHFNADATRLGEGSWPLAKG*AAIFSC Trigger: ACAGCTGAAGATCGCAGCCAATCCCTTTGCCAAAGG...CCAGCTCCCTTCCCCCAGCCTGGTAGCATCCGCATTGAAGTGGTATCCCCCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS TCA 90 bp | ATCCAGAAGAAACAAGTAGCGGGCCTCTGGGTCCAGGCCAGTGACTaGTACTCGGCAAGCAGGGAACATGCGCCTGCCAGCCTTGGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: IQKKQVAGLWVQASD*YSASREHAPASLGD Trigger: ATCACCAAGGCTGGCAGGCGCATGTTCCCTGCTTGCCGAGTATCAGTCACTGGCCTGGACCCAGAGGCCCGCTACTTGTTTCTTCTGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS CCA 90 bp | AGAGCAGATGGGAGAAGGGGCAAAGGAGCGGCTGCAGCCAGAGTGTaGGGAGCTGCCTCGATCCCAGAGAGGAAGCAATCCAGTTTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RADGRRGKGAAAARV*GAASIPERKQSSLE Trigger: TTCTAAACTGGATTGCTTCCTCTCTGGGATCGAGGCAGCTCCCCACACTCTGGCTGCAGCCGCTCCTTTGCCCCTTCTCCCATCTGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS-3UTR CAA 90 bp | GGAGGGGGATACCACTTCAATGCGGATGCTACCAGGCTGGGGGAAGGGAGCTGGTTTTCTCGGAAACCTTaGGCAAAGGGATTGGCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: GGGYHFNADATRLGEGSWFSRKP*AKGLAA Trigger: CGCAGCCAATCCCTTTGCCAAAGGTTTCCGAGAAAA...CCAGCTCCCTTCCCCCAGCCTGGTAGCATCCGCATTGAAGTGGTATCCCCCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS GCA 90 bp | TGGGAGAAGGGGCAAAGGAGCGGCTGCAGCCAGAGTGTGGGGAGCTaGCTCGATCCCAGAGAGGAAGCAATCCAGTTTAGAAGTATCCAA | + |
|
Preference number: 5 (lower is better) Translates to: WEKGQRSGCSQSVGS*LDPREEAIQFRSIQ Trigger: TTGGATACTTCTAAACTGGATTGCTTCCTCTCTGGGATCGAGGCAGCTCCCCACACTCTGGCTGCAGCCGCTCCTTTGCCCCTTCTCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS-3UTR CAA 90 bp | AAATTGGCATGGCTTGCACTAGTAACAAGGCCCCCAGGAGGTGGGGGTACTGGGATGCGAGGCTGGTACTaGTGCATCGAGTGCAAGATC | + |
|
Preference number: 5 (lower is better) Translates to: KLAWLALVTRPPGGGGTGMRGWY*CIECKI Trigger: GATCTTGCACTCGATGCACAAGTACCAGCCTCGCAT...CCCAGTACCCCCACCTCCTGGGGGCCTTGTTACTAGTGCAAGCCATGCCAATTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000094037.5 |
||
| CDS-3UTR CAA 90 bp | CTGGACTCAGAGCTGCCTTGCCTGAGCTTTGAAGCCAGAGGGGGTGGAGTGAAACCTTTGGCAAAGGGATaGGCTGCGATCTTCAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LDSELPCLSFEARGGGVKPLAKG*AAIFSC Trigger: ACAGCTGAAGATCGCAGCCAATCCCTTTGCCAAAGG...TTTCACTCCACCCCCTCTGGCTTCAAAGCTCAGGCAAGGCAGCTCTGAGTCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094037.5 |
||
| CDS CCA 90 bp | GGAGTCACAGGGACCCCCTGGTGTATCATCATGTTCCTGGTACCCTaGCACAGTACCCGGCACACAATAATTAGTAAGCATTCCCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: GVTGTPWCIIMFLVP*HSTRHTIISKHSLN Trigger: ATTCAGGGAATGCTTACTAATTATTGTGTGCCGGGTACTGTGCCAGGGTACCAGGAACATGATGATACACCAGGGGGTCCCTGTGACTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172352.8 |
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| CDS TCA 90 bp | CACAGTACCCGGCACACAATAATTAGTAAGCATTCCCTGAATGAATaGTGCCCACCTCTTACAGTTTCTGCCATTTTCTCGGAAACCTTT | + |
|
Preference number: 5 (lower is better) Translates to: HSTRHTIISKHSLNE*CPPLTVSAIFSETF Trigger: AAAGGTTTCCGAGAAAATGGCAGAAACTGTAAGAGGTGGGCATCATTCATTCAGGGAATGCTTACTAATTATTGTGTGCCGGGTACTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172352.8 |
||
| CDS GCA 72 bp | CCCAGGAAGCGAGTGAAGGGCCTCTGGGGGTGGCGGTaGTGTCTCGGGGCCCAGAGCAGATGGGAGAAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: PRKRVKGLWGWR*CLGAQSRWEKG Trigger: CCCCTTCTCCCATCTGCTCTGGGCCCCGAGACAGCACCGCCACCCCCAGAGGCCCTTCACTCGCTTCCTGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
||
| CDS GCA 72 bp | GGTAGGCGGGGTTCAGCCTTGCCACTTGGCTCCCAGTaGTGGCCCTGCCAGCGGTATCGGGCCCCATCCACT | + |
|
Preference number: 6 (lower is better) Translates to: GRRGSALPLGSQ*WPCQRYRAPST Trigger: AGTGGATGGGGCCCGATACCGCTGGCAGGGCCAGCACTGGGAGCCAAGTGGCAAGGCTGAACCCCGCCTACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
||
| CDS CCA 72 bp | AGGCGGGGTTCAGCCTTGCCACTTGGCTCCCAGTGCTaGCCCTGCCAGCGGTATCGGGCCCCATCCACTGGA | + |
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Preference number: 6 (lower is better) Translates to: RRGSALPLGSQC*PCQRYRAPSTG Trigger: TCCAGTGGATGGGGCCCGATACCGCTGGCAGGGCCAGCACTGGGAGCCAAGTGGCAAGGCTGAACCCCGCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS CCA 72 bp | GGTAGCGGTAACCCTCTGTCAGGGCAGGTGGGAAGGTaGAGTCTGCCCCAGGCTGGGGGTGTCCCAGACGGT | + |
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Preference number: 6 (lower is better) Translates to: GSGNPLSGQVGR*SLPQAGGVPDG Trigger: ACCGTCTGGGACACCCCCAGCCTGGGGCAGACTCCACCTTCCCACCTGCCCTGACAGAGGGTTACCGCTACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS CAA 90 bp | GGTGAATGTAGACACGGTCGGGTAGGCGGGGTTCAGCCTTGCCACTaGGCTCCCAGTGCTGGCCCTGCCAGCGGTATCGGGCCCCATCCA | + |
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Preference number: 6 (lower is better) Translates to: GECRHGRVGGVQPCH*APSAGPASGIGPHP Trigger: TGGATGGGGCCCGATACCGCTGGCAGGGCCAGCACTGGGAGCCAAGTGGCAAGGCTGAACCCCGCCTACCCGACCGTGTCTACATTCACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS GCA 72 bp | GCCCAGAGCAGATGGGAGAAGGGGCAAAGGAGCGGCTaGAGCCAGAGTGTGGGGAGCTGCCTCGATCCCAGA | + |
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Preference number: 6 (lower is better) Translates to: AQSRWEKGQRSG*SQSVGSCLDPR Trigger: TCTGGGATCGAGGCAGCTCCCCACACTCTGGCTGCAGCCGCTCCTTTGCCCCTTCTCCCATCTGCTCTGGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS GCA 72 bp | GGTTCAGCCTTGCCACTTGGCTCCCAGTGCTGGCCCTaGCAGCGGTATCGGGCCCCATCCACTGGAACCACA | + |
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Preference number: 6 (lower is better) Translates to: GSALPLGSQCWP*QRYRAPSTGTT Trigger: TGTGGTTCCAGTGGATGGGGCCCGATACCGCTGGCAGGGCCAGCACTGGGAGCCAAGTGGCAAGGCTGAACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS GCA 72 bp | GAATGTAGACACGGTCGGGTAGGCGGGGTTCAGCCTTaGCACTTGGCTCCCAGTGCTGGCCCTGCCAGCGGT | + |
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Preference number: 6 (lower is better) Translates to: ECRHGRVGGVQP*HLAPSAGPASG Trigger: ACCGCTGGCAGGGCCAGCACTGGGAGCCAAGTGGCAAGGCTGAACCCCGCCTACCCGACCGTGTCTACATTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS CCA 72 bp | ATCCCCACTCCCACAGGCCTCTGTGGCCACTGGCTCTaGGCCCCGAAGTTTCCTCTTCACACGGGCATCCCG | + |
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Preference number: 6 (lower is better) Translates to: IPTPTGLCGHWL*APKFPLHTGIP Trigger: CGGGATGCCCGTGTGAAGAGGAAACTTCGGGGCCCAGAGCCAGTGGCCACAGAGGCCTGTGGGAGTGGGGAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094037.5 |
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| CDS CCA 72 bp | GGGAGAAGGGGCAAAGGAGCGGCTGCAGCCAGAGTGTaGGGAGCTGCCTCGATCCCAGAGAGGAAGCAATCC | + |
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Preference number: 6 (lower is better) Translates to: GRRGKGAAAARV*GAASIPERKQS Trigger: GGATTGCTTCCTCTCTGGGATCGAGGCAGCTCCCCACACTCTGGCTGCAGCCGCTCCTTTGCCCCTTCTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS TCA 72 bp | AAACAAGTAGCGGGCCTCTGGGTCCAGGCCAGTGACTaGTACTCGGCAAGCAGGGAACATGCGCCTGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: KQVAGLWVQASD*YSASREHAPAS Trigger: GCTGGCAGGCGCATGTTCCCTGCTTGCCGAGTATCAGTCACTGGCCTGGACCCAGAGGCCCGCTACTTGTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS CAA 72 bp | TGGGTGGCTCTCACCAGGTGGATGCGAGGCTGGTACTaGTGCATCGAGTGCAAGATCAGGTGGCCATGGGGG | + |
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Preference number: 6 (lower is better) Translates to: WVALTRWMRGWY*CIECKIRWPWG Trigger: CCCCCATGGCCACCTGATCTTGCACTCGATGCACAAGTACCAGCCTCGCATCCACCTGGTGAGAGCCACCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS TCA 72 bp | ATTCCTTCCACAGTTCCTGGTTCTCCAAGCTCAGGCTaGCCCCAGGAAGCGAGTGAAGGGCCTCTGGGGGTG | + |
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Preference number: 6 (lower is better) Translates to: IPSTVPGSPSSG*PQEASEGPLGV Trigger: CACCCCCAGAGGCCCTTCACTCGCTTCCTGGGGTCAGCCTGAGCTTGGAGAACCAGGAACTGTGGAAGGAAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS TCA 72 bp | GAAGAAACAAGTAGCGGGCCTCTGGGTCCAGGCCAGTaGCTGATACTCGGCAAGCAGGGAACATGCGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: EETSSGPLGPGQ*LILGKQGTCAC Trigger: GCAGGCGCATGTTCCCTGCTTGCCGAGTATCAGTCACTGGCCTGGACCCAGAGGCCCGCTACTTGTTTCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS GCA 72 bp | GGGCAAAGGAGCGGCTGCAGCCAGAGTGTGGGGAGCTaGCTCGATCCCAGAGAGGAAGCAATCCAGTTTAGA | + |
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Preference number: 6 (lower is better) Translates to: GQRSGCSQSVGS*LDPREEAIQFR Trigger: TCTAAACTGGATTGCTTCCTCTCTGGGATCGAGGCAGCTCCCCACACTCTGGCTGCAGCCGCTCCTTTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS CCA 72 bp | GAAGGGACCCCCTTGGATGAAGTGTGGGGCAAAGGATaGTACAGATGGAGCTGCCTGATAGGCAGAGCCCCC | + |
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Preference number: 6 (lower is better) Translates to: EGTPLDEVWGKG*YRWSCLIGRAP Trigger: GGGGGCTCTGCCTATCAGGCAGCTCCATCTGTACCATCCTTTGCCCCACACTTCATCCAAGGGGGTCCCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS CAA 90 bp | CTGCATAGTTGGGTGGCTCTCACCAGGTGGATGCGAGGCTGGTACTaGTGCATCGAGTGCAAGATCAGGTGGCCATGGGGGTCCAGTGTG | + |
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Preference number: 6 (lower is better) Translates to: LHSWVALTRWMRGWY*CIECKIRWPWGSSV Trigger: CACACTGGACCCCCATGGCCACCTGATCTTGCACTCGATGCACAAGTACCAGCCTCGCATCCACCTGGTGAGAGCCACCCAACTATGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS CCA 72 bp | TCTGTCCCCACAGCGCTGAATTCCTTCCACAGTTCCTaGTTCTCCAAGCTCAGGCTGACCCCAGGAAGCGAG | + |
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Preference number: 6 (lower is better) Translates to: SVPTALNSFHSS*FSKLRLTPGSE Trigger: CTCGCTTCCTGGGGTCAGCCTGAGCTTGGAGAACCAGGAACTGTGGAAGGAATTCAGCGCTGTGGGGACAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS CAA 72 bp | TGCAAGATCAGGTGGCCATGGGGGTCCAGTGTGCTGTaGGTGAGCTTAACACGATGGAAGGATACGGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: CKIRWPWGSSVL*VSLTRWKDTGC Trigger: GCAGCCCGTATCCTTCCATCGTGTTAAGCTCACCAACAGCACACTGGACCCCCATGGCCACCTGATCTTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094037.5 ENSMUST00000172352.8 |
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| CDS CCA 72 bp | GGGACCCCCTGGTGTATCATCATGTTCCTGGTACCCTaGCACAGTACCCGGCACACAATAATTAGTAAGCAT | + |
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Preference number: 6 (lower is better) Translates to: GTPWCIIMFLVP*HSTRHTIISKH Trigger: ATGCTTACTAATTATTGTGTGCCGGGTACTGTGCCAGGGTACCAGGAACATGATGATACACCAGGGGGTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172352.8 |
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| CDS TCA 72 bp | CGGCACACAATAATTAGTAAGCATTCCCTGAATGAATaGTGCCCACCTCTTACAGTTTCTGCCATTTTCTCG | + |
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Preference number: 6 (lower is better) Translates to: RHTIISKHSLNE*CPPLTVSAIFS Trigger: CGAGAAAATGGCAGAAACTGTAAGAGGTGGGCATCATTCATTCAGGGAATGCTTACTAATTATTGTGTGCCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172352.8 |
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