Pregenerated sensors for TBX5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018263Ensembl transcript IDs: ENSMUST00000018407.10, ENSMUST00000202504.3, ENSMUST00000202723.4
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGACGGCTGGAGAGACTGGAGCTGGGACGATAGGTGCTGAGGAGTaGGGGTGTCAGACTGAGCCCGACATCCTAGCTCCATACGCTCAG | + |
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Preference number: 1 (lower is better) Translates to: QTAGETGAGTIGAEE*GCQTEPDILAPYAQ Trigger: CTGAGCGTATGGAGCTAGGATGTCGGGCTCAGTCTGACACCCTCACTCCTCAGCACCTATCGTCCCAGCTCCAGTCTCTCCAGCCGTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| 3UTR GCA 90 bp | GCTCCAGATATGGAGGTTACAACGGGCGATCTAGAGCTTCGCATCTaGGGGGTTCTCATCACTACTGTCCCTCACTTCTCTCTCTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: APDMEVTTGDLELRI*GVLITTVPHFSLSL Trigger: GAGAGAGAGAGAGAAGTGAGGGACAGTAGTGATGAGAACCCCGCAGATGCGAAGCTCTAGATCGCCCGTTGTAACCTCCATATCTGGAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| 3UTR CCA 90 bp | CTGTGTATGTGTTCCTGGTTGGATGAGAGTGGGCGCGGGGTAGGATaGGACTCGACACTCTTTCTGTTTCTCCTATCGGTTCTGAGACAT | + |
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Preference number: 1 (lower is better) Translates to: LCMCSWLDESGRGVG*DSTLFLFLLSVLRH Trigger: ATGTCTCAGAACCGATAGGAGAAACAGAAAGAGTGTCGAGTCCCATCCTACCCCGCGCCCACTCTCATCCAACCAGGAACACATACACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| 3UTR-3UTR CCA 90 bp | GGGGGTGGGGATTTCTTGGAGGCTGAGGCACAGGTAACAGTTCCTCTCCTGAGGCTCCATTCAAGGGACTaGGTCCCAGTAAGAAAATTC | + |
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Preference number: 2 (lower is better) Translates to: GGGDFLEAEAQVTVPLLRLHSRD*VPVRKF Trigger: GAATTTTCTTACTGGGACCCAGTCCCTTGAATGGAG...CCTCAGGAGAGGAACTGTTACCTGTGCCTCAGCCTCCAAGAAATCCCCACCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| 3UTR-3UTR CCA 90 bp | GGTCAGCCCCCAGGCTGGGTTTCATGTTACTACTTAATTAGAATTCCTATTTATCCAGGTGATTGGCGCTaGGGTGGGGGTGGGGATGGG | + |
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Preference number: 2 (lower is better) Translates to: GQPPGWVSCYYLIRIPIYPGDWR*GGGGDG Trigger: CCCATCCCCACCCCCACCCCAGCGCCAATCACCTGG...ATAAATAGGAATTCTAATTAAGTAGTAACATGAAACCCAGCCTGGGGGCTGACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| 3UTR-3UTR CCA 90 bp | CTTGGTCAGCCCCCAGGCTGGGTTTCATGTTACTACTTAATTAGAATTCCTATTTGTGTCCCAGGTGATTaGCGCTGGGGTGGGGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: LGQPPGWVSCYYLIRIPICVPGD*RWGGGG Trigger: CCCACCCCCACCCCAGCGCCAATCACCTGGGACACA...AATAGGAATTCTAATTAAGTAGTAACATGAAACCCAGCCTGGGGGCTGACCAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| 3UTR-3UTR GCA 90 bp | AAAGGAAAGAGAGAGAGAGAGAGAGAGAGAGCGCACAAACACAGTTTTGAGTACGGGAGCTTGCGCCCTTaGTGTGTGTCACAGTTCTGT | + |
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Preference number: 2 (lower is better) Translates to: KGKRERERERAHKHSFEYGSLRP*CVSQFC Trigger: ACAGAACTGTGACACACAGCAAGGGCGCAAGCTCCC...GTACTCAAAACTGTGTTTGTGCGCTCTCTCTCTCTCTCTCTCTCTCTTTCCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| 3UTR-3UTR TCA 90 bp | AACAACATAAAAAGACAAGATCACATAGAATGCTCATGCACAAACTCACTCACTGTTTTGTGTCCCAGGTaGTTGGCGCTGGGGTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: NNIKRQDHIECSCTNSLTVLCPR*LALGWG Trigger: CCCCCACCCCAGCGCCAATCACCTGGGACACAAAAC...AGTGAGTGAGTTTGTGCATGAGCATTCTATGTGATCTTGTCTTTTTATGTTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| 3UTR-3UTR TCA 90 bp | CATAAAAAGACAAGATCACATAGAATGCTCATGCACAAACTCACTCACTCACTCGGATTTCTTGGAGGCTaGGGCACAGGTAACAGTTCC | + |
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Preference number: 2 (lower is better) Translates to: HKKTRSHRMLMHKLTHSLGFLGG*GTGNSS Trigger: GGAACTGTTACCTGTGCCTCAGCCTCCAAGAAATCC...GAGTGAGTGAGTGAGTTTGTGCATGAGCATTCTATGTGATCTTGTCTTTTTATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| 3UTR-3UTR CCA 90 bp | AACAACATAAAAAGACAAGATCACATAGAATGCTCATGCACAAACTCACTCACTTTAGCCACAGACGGCTaGAGAGACTGGAGCTGGGAC | + |
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Preference number: 2 (lower is better) Translates to: NNIKRQDHIECSCTNSLTLATDG*RDWSWD Trigger: GTCCCAGCTCCAGTCTCTCCAGCCGTCTGTGGCTAA...AGTGAGTGAGTTTGTGCATGAGCATTCTATGTGATCTTGTCTTTTTATGTTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| 3UTR-3UTR CCA 90 bp | CATAAAAAGACAAGATCACATAGAATGCTCATGCACAAACTCACTCACTCACTCTCTTATCAGTGGCTGTaGAGCTCCAGATATGGAGGT | + |
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Preference number: 2 (lower is better) Translates to: HKKTRSHRMLMHKLTHSLSYQWL*SSRYGG Trigger: ACCTCCATATCTGGAGCTCCACAGCCACTGATAAGA...GAGTGAGTGAGTGAGTTTGTGCATGAGCATTCTATGTGATCTTGTCTTTTTATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| 3UTR GCA 72 bp | ACTTTCTTCTCCCCTACAACGTGTAAGCCGGGAGCTTaGGCCCTTGCTGTGTGTCACAGTTCTGTTCCTGTG | + |
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Preference number: 3 (lower is better) Translates to: TFFSPTTCKPGA*ALAVCHSSVPV Trigger: CACAGGAACAGAACTGTGACACACAGCAAGGGCGCAAGCTCCCGGCTTACACGTTGTAGGGGAGAAGAAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| 3UTR CCA 72 bp | TGTTCCTGGTTGGATGAGAGTGGGCGCGGGGTAGGATaGGACTCGACACTCTTTCTGTTTCTCCTATCGGTT | + |
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Preference number: 3 (lower is better) Translates to: CSWLDESGRGVG*DSTLFLFLLSV Trigger: AACCGATAGGAGAAACAGAAAGAGTGTCGAGTCCCATCCTACCCCGCGCCCACTCTCATCCAACCAGGAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| 3UTR GCA 72 bp | ATGGAGGTTACAACGGGCGATCTAGAGCTTCGCATCTaGGGGGTTCTCATCACTACTGTCCCTCACTTCTCT | + |
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Preference number: 3 (lower is better) Translates to: MEVTTGDLELRI*GVLITTVPHFS Trigger: AGAGAAGTGAGGGACAGTAGTGATGAGAACCCCGCAGATGCGAAGCTCTAGATCGCCCGTTGTAACCTCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| 3UTR-3UTR CAA 90 bp | GGTCAGCCCCCAGGCTGGGTTTCATGTTACTACTTAATTAGAATTCCTATTTATGGGGGTGGGGATTTCTaGGAGGCTGAGGCACAGGTA | + |
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Preference number: 3 (lower is better) Translates to: GQPPGWVSCYYLIRIPIYGGGDF*EAEAQV Trigger: TACCTGTGCCTCAGCCTCCAAGAAATCCCCACCCCC...ATAAATAGGAATTCTAATTAAGTAGTAACATGAAACCCAGCCTGGGGGCTGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| 3UTR-3UTR CAA 90 bp | CTTGGTCAGCCCCCAGGCTGGGTTTCATGTTACTACTTAATTAGAATTCCTATTCATCGAGTCACAATTTaGGAATGGTGGCTTCGGGGC | + |
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Preference number: 3 (lower is better) Translates to: LGQPPGWVSCYYLIRIPIHRVTI*EWWLRG Trigger: GCCCCGAAGCCACCATTCCAAAATTGTGACTCGATG...AATAGGAATTCTAATTAAGTAGTAACATGAAACCCAGCCTGGGGGCTGACCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| 3UTR TCA 72 bp | GGGACTCGACACTCTTTCTGTTTCTCCTATCGGTTCTaGGACATCGAGTCACAATTTTGGAATGGTGGCTTC | + |
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Preference number: 3 (lower is better) Translates to: GTRHSFCFSYRF*DIESQFWNGGF Trigger: GAAGCCACCATTCCAAAATTGTGACTCGATGTCTCAGAACCGATAGGAGAAACAGAAAGAGTGTCGAGTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR TCA 90 bp | GGGGGTGGGGATTTCTTGGAGGCTGAGGCACAGGTAACAGTTCCTCTCCTGAGGCCATGCCCTGCTGGGTaGAGGCAGCCTGCGGGGATG | + |
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Preference number: 4 (lower is better) Translates to: GGGDFLEAEAQVTVPLLRPCPAG*RQPAGM Trigger: CATCCCCGCAGGCTGCCTTCACCCAGCAGGGCATGG...CCTCAGGAGAGGAACTGTTACCTGTGCCTCAGCCTCCAAGAAATCCCCACCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR TCA 90 bp | GGGGGTGGGGATTTCTTGGAGGCTGAGGCACAGGTAACAGTTCCTCTCCTGAGGCTCGGGTCTCGCTGCTaGAGGGGCTGTGGTTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: GGGDFLEAEAQVTVPLLRLGSRC*RGCGWR Trigger: CCTCCAACCACAGCCCCTTCAGCAGCGAGACCCGAG...CCTCAGGAGAGGAACTGTTACCTGTGCCTCAGCCTCCAAGAAATCCCCACCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR TCA 90 bp | AGCTGTTTTGCTCTGTATCCGGAGGGTCACAGAGGAGGTTTGAGCCAGCCTGGGTGGGCTGCACGGTGGTaGCGGTACAGCTGCTATAGG | + |
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Preference number: 4 (lower is better) Translates to: SCFALYPEGHRGGLSQPGWAARW*RYSCYR Trigger: CCTATAGCAGCTGTACCGTCACCACCGTGCAGCCCA...CCCAGGCTGGCTCAAACCTCCTCTGTGACCCTCCGGATACAGAGCAAAACAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR TCA 90 bp | TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCACACCCTCTCTGGCCAGGGGCCCCGAGGTaGAATGAGCGGAGAAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: SLSLSLSLSLSLSPHPLWPGAPR*NERRSA Trigger: AGCACTTCTCCGCTCATTTCACCTCGGGGCCCCTGG...CCAGAGAGGGTGTGGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR CCA 90 bp | TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCACACCCTCTCTGGGTGCTCCTGGGCCAGTaGGTATGGGTTAGGTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: SLSLSLSLSLSLSPHPLWVLLGQ*VWVRWG Trigger: CCCCCACCTAACCCATACCCACTGGCCCAGGAGCAC...CCAGAGAGGGTGTGGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR GCA 90 bp | TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCACACCCTCTCTGGTCCACTCTGGCACCATaGCGACGCCGTGTACCGAGT | + |
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Preference number: 4 (lower is better) Translates to: SLSLSLSLSLSLSPHPLWSTLAP*RRRVPS Trigger: ACTCGGTACACGGCGTCGGCATGGTGCCAGAGTGGA...CCAGAGAGGGTGTGGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR CCA 90 bp | GGGGGTGGGGATTTCTTGGAGGCTGAGGCACAGGTAACAGTTCCTCTCCTGAGGAGGGGTGCTCCGTGCTaGAACATTCCTCATCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: GGGDFLEAEAQVTVPLLRRGAPC*NIPHLS Trigger: GGAAAGATGAGGAATGTTCCAGCACGGAGCACCCCT...CCTCAGGAGAGGAACTGTTACCTGTGCCTCAGCCTCCAAGAAATCCCCACCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR CCA 90 bp | AGCTGTTTTGCTCTGTATCCGGAGGGTCACAGAGGAGGTTTGAGCCAGCCTGGGAGGTGTCTTCCTCGCTaGGGGATGTCTCCATGTACG | + |
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Preference number: 4 (lower is better) Translates to: SCFALYPEGHRGGLSQPGRCLPR*GMSPCT Trigger: CGTACATGGAGACATCCCCCAGCGAGGAAGACACCT...CCCAGGCTGGCTCAAACCTCCTCTGTGACCCTCCGGATACAGAGCAAAACAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR TCA 90 bp | TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCACACCCTCTCTGGAGGCTGATGGGCCACTaGGGTCTGGTGCTGAAACAT | + |
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Preference number: 4 (lower is better) Translates to: SLSLSLSLSLSLSPHPLWRLMGH*GLVLKH Trigger: ATGTTTCAGCACCAGACCTCAGTGGCCCATCAGCCT...CCAGAGAGGGTGTGGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR GCA 90 bp | AAAGGAAAGAGAGAGAGAGAGAGAGAGAGAGCGCACAAACACAGTTTTGAGTACCGGAGCTGGCATACATaGAGGCCTGCCGCTGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: KGKRERERERAHKHSFEYRSWHT*RPAAGP Trigger: CGGCCCAGCGGCAGGCCTGCATGTATGCCAGCTCCG...GTACTCAAAACTGTGTTTGTGCGCTCTCTCTCTCTCTCTCTCTCTCTTTCCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR CCA 90 bp | GGACTCGACACTCTTTCTGTTTCTCCTATCGGTTCTGAGACATCGAGTCACAATGGGGGCAGAAGGTCCTaGGAGGGGCCAGAGACACCA | + |
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Preference number: 4 (lower is better) Translates to: GLDTLSVSPIGSETSSHNGGRRS*EGPETP Trigger: TGGTGTCTCTGGCCCCTCCCAGGACCTTCTGCCCCC...ATTGTGACTCGATGTCTCAGAACCGATAGGAGAAACAGAAAGAGTGTCGAGTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR GCA 90 bp | GGACTCGACACTCTTTCTGTTTCTCCTATCGGTTCTGAGACATCGAGTCACAATAGACGGTCCATGGGCTaGACGGTGGTGACGGTACAG | + |
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Preference number: 4 (lower is better) Translates to: GLDTLSVSPIGSETSSHNRRSMG*TVVTVQ Trigger: CTGTACCGTCACCACCGTGCAGCCCATGGACCGTCT...ATTGTGACTCGATGTCTCAGAACCGATAGGAGAAACAGAAAGAGTGTCGAGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR TCA 90 bp | CATAAAAAGACAAGATCACATAGAATGCTCATGCACAAACTCACTCACTCACTCGAGGCCCGCACTGCCTaGCCACAGGCTGATGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: HKKTRSHRMLMHKLTHSLEARTA*PQADGP Trigger: TGGCCCATCAGCCTGTGGTCAGGCAGTGCGGGCCTC...GAGTGAGTGAGTGAGTTTGTGCATGAGCATTCTATGTGATCTTGTCTTTTTATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR GCA 90 bp | CATAAAAAGACAAGATCACATAGAATGCTCATGCACAAACTCACTCACTCACTCCAGGCTCCAGAGGCGTaGGCGCCAGGCCAAAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: HKKTRSHRMLMHKLTHSLQAPEA*APGQSP Trigger: AGGGCTTTGGCCTGGCGCGCACGCCTCTGGAGCCTG...GAGTGAGTGAGTGAGTTTGTGCATGAGCATTCTATGTGATCTTGTCTTTTTATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR CCA 90 bp | GGTCAGCCCCCAGGCTGGGTTTCATGTTACTACTTAATTAGAATTCCTATTTATCCTTCCATGCCCTGCTaGGTGAAGGCAGCCTGCGGG | + |
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Preference number: 4 (lower is better) Translates to: GQPPGWVSCYYLIRIPIYPSMPC*VKAACG Trigger: CCCGCAGGCTGCCTTCACCCAGCAGGGCATGGAAGG...ATAAATAGGAATTCTAATTAAGTAGTAACATGAAACCCAGCCTGGGGGCTGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR CCA 90 bp | AGAAGAAGGGAAGGAGGAAGGAAGGAAGGAGAAAGAAAAGAAACACAAAACCTTGTGGGCTCCGGTTGCTaGGGAGTCCGGGTGCACGTA | + |
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Preference number: 4 (lower is better) Translates to: RRREGGRKEGERKETQNLVGSGC*GVRVHV Trigger: TACGTGCACCCGGACTCCCCAGCAACCGGAGCCCAC...AAGGTTTTGTGTTTCTTTTCTTTCTCCTTCCTTCCTTCCTCCTTCCCTTCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR CCA 90 bp | AAGACAAGATCACATAGAATGCTCATGCACAAACTCACTCACTCACTCACTCACAGTGTAGAGAAACTCTaGGGGCTGGAGGCCGCCCGG | + |
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Preference number: 4 (lower is better) Translates to: KTRSHRMLMHKLTHSLTHSVEKL*GLEAAR Trigger: CCGGGCGGCCTCCAGCCCCCAGAGTTTCTCTACACT...GTGAGTGAGTGAGTGAGTGAGTTTGTGCATGAGCATTCTATGTGATCTTGTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR TCA 90 bp | TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCACACCCTCTCTGGCACAGTTCACGTTCATaGAGAAACACCTTGATTCCT | + |
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Preference number: 4 (lower is better) Translates to: SLSLSLSLSLSLSPHPLWHSSRS*RNTLIP Trigger: AGGAATCAAGGTGTTTCTTCATGAACGTGAACTGTG...CCAGAGAGGGTGTGGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR TCA 90 bp | TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCACACCCTCTCTGGCAATTTTCAGCTGTGTaGTCTTGTGATTCTGGTACG | + |
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Preference number: 4 (lower is better) Translates to: SLSLSLSLSLSLSPHPLWQFSAV*SCDSGT Trigger: CGTACCAGAATCACAAGATCACACAGCTGAAAATTG...CCAGAGAGGGTGTGGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR GCA 90 bp | AGAAGAAGGGAAGGAGGAAGGAAGGAAGGAGAAAGAAAAGAAACACAAAACCTTGCATACATGCAGGCCTaGCGCTGGGCCGACTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: RRREGGRKEGERKETQNLAYMQA*RWADSV Trigger: GACAGAGTCGGCCCAGCGGCAGGCCTGCATGTATGC...AAGGTTTTGTGTTTCTTTTCTTTCTCCTTCCTTCCTTCCTCCTTCCCTTCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR TCA 90 bp | AAGACAAGATCACATAGAATGCTCATGCACAAACTCACTCACTCACTCACTCACACTGAGGTCTGGTGCTaGAACATCCCTTCGCCGAGC | + |
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Preference number: 4 (lower is better) Translates to: KTRSHRMLMHKLTHSLTHTEVWC*NIPSPS Trigger: GCTCGGCGAAGGGATGTTTCAGCACCAGACCTCAGT...GTGAGTGAGTGAGTGAGTGAGTTTGTGCATGAGCATTCTATGTGATCTTGTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR GCA 90 bp | GGACTCGACACTCTTTCTGTTTCTCCTATCGGTTCTGAGACATCGAGTCACAATCCGGGAAGACGTGGGTaGAAAACGCAGTGTTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: GLDTLSVSPIGSETSSHNPGRRG*KTQCSL Trigger: CAAAGAACACTGCGTTTTGCACCCACGTCTTCCCGG...ATTGTGACTCGATGTCTCAGAACCGATAGGAGAAACAGAAAGAGTGTCGAGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR GCA 90 bp | CTTGGTCAGCCCCCAGGCTGGGTTTCATGTTACTACTTAATTAGAATTCCTATTAACCATGGTTGGCCATaGCAGCCAACCGAGGGACCA | + |
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Preference number: 4 (lower is better) Translates to: LGQPPGWVSCYYLIRIPINHGWP*QPTEGP Trigger: TGGTCCCTCGGTTGGCTGGCATGGCCAACCATGGTT...AATAGGAATTCTAATTAAGTAGTAACATGAAACCCAGCCTGGGGGCTGACCAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR GCA 90 bp | GGTCAGCCCCCAGGCTGGGTTTCATGTTACTACTTAATTAGAATTCCTATTTATCGGCATGGCAGGCTCTaGTTTGCCAGTTACGGACCA | + |
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Preference number: 4 (lower is better) Translates to: GQPPGWVSCYYLIRIPIYRHGRL*FASYGP Trigger: TGGTCCGTAACTGGCAAAGCAGAGCCTGCCATGCCG...ATAAATAGGAATTCTAATTAAGTAGTAACATGAAACCCAGCCTGGGGGCTGACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR CCA 90 bp | AAAGGAAAGAGAGAGAGAGAGAGAGAGAGAGCGCACAAACACAGTTTTGAGTACCTAAATTGGATGAGGTaGAGAGAGCTCGGGTCTCGC | + |
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Preference number: 4 (lower is better) Translates to: KGKRERERERAHKHSFEYLNWMR*RELGSR Trigger: GCGAGACCCGAGCTCTCTCCACCTCATCCAATTTAG...GTACTCAAAACTGTGTTTGTGCGCTCTCTCTCTCTCTCTCTCTCTCTTTCCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR CCA 90 bp | AGAAGAAGGGAAGGAGGAAGGAAGGAAGGAGAAAGAAAAGAAACACAAAACCTTGTCTCCGGGAAGACGTaGGTGCAAAACGCAGTGTTC | + |
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Preference number: 4 (lower is better) Translates to: RRREGGRKEGERKETQNLVSGKT*VQNAVF Trigger: GAACACTGCGTTTTGCACCCACGTCTTCCCGGAGAC...AAGGTTTTGTGTTTCTTTTCTTTCTCCTTCCTTCCTTCCTCCTTCCCTTCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR CCA 90 bp | AAGACAAGATCACATAGAATGCTCATGCACAAACTCACTCACTCACTCACTCACGCCTCACTGTGCTCCTaGGAACCACAGGATACTCTT | + |
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Preference number: 4 (lower is better) Translates to: KTRSHRMLMHKLTHSLTHASLCS*EPQDTL Trigger: AAGAGTATCCTGTGGTTCCCAGGAGCACAGTGAGGC...GTGAGTGAGTGAGTGAGTGAGTTTGTGCATGAGCATTCTATGTGATCTTGTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR CCA 90 bp | CATAAAAAGACAAGATCACATAGAATGCTCATGCACAAACTCACTCACTCACTCTGGGTATGGGTTAGGTaGGGGCAGAAGGTCCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: HKKTRSHRMLMHKLTHSLWVWVR*GQKVLG Trigger: TCCCAGGACCTTCTGCCCCCACCTAACCCATACCCA...GAGTGAGTGAGTGAGTTTGTGCATGAGCATTCTATGTGATCTTGTCTTTTTATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR GCA 90 bp | GGACTCGACACTCTTTCTGTTTCTCCTATCGGTTCTGAGACATCGAGTCACAATAAACATTCTCCTCCCTaGCTTGGTGATGATCATCTC | + |
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Preference number: 4 (lower is better) Translates to: GLDTLSVSPIGSETSSHNKHSPP*LGDDHL Trigger: GAGATGATCATCACCAAGGCAGGGAGGAGAATGTTT...ATTGTGACTCGATGTCTCAGAACCGATAGGAGAAACAGAAAGAGTGTCGAGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR GCA 90 bp | AGAAGAAGGGAAGGAGGAAGGAAGGAAGGAGAAAGAAAAGAAACACAAAACCTTCTTTGTGCCTCACTGTaGTCCTGGGAACCACAGGAT | + |
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Preference number: 4 (lower is better) Translates to: RRREGGRKEGERKETQNLLCASL*SWEPQD Trigger: ATCCTGTGGTTCCCAGGAGCACAGTGAGGCACAAAG...AAGGTTTTGTGTTTCTTTTCTTTCTCCTTCCTTCCTTCCTCCTTCCCTTCTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR GCA 90 bp | GGTCAGCCCCCAGGCTGGGTTTCATGTTACTACTTAATTAGAATTCCTATTTATTGCTATAGGAGGGCATaGTGGGCCATGTGTTACAGC | + |
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Preference number: 4 (lower is better) Translates to: GQPPGWVSCYYLIRIPIYCYRRA*WAMCYS Trigger: GCTGTAACACATGGCCCAGCATGCCCTCCTATAGCA...ATAAATAGGAATTCTAATTAAGTAGTAACATGAAACCCAGCCTGGGGGCTGACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR CCA 90 bp | AGAAGAAGGGAAGGAGGAAGGAAGGAAGGAGAAAGAAAAGAAACACAAAACCTTCCAAACGGGTCCAGGTaGTTGTTGGTGAGTTTGAGC | + |
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Preference number: 4 (lower is better) Translates to: RRREGGRKEGERKETQNLPNGSR*LLVSLS Trigger: GCTCAAACTCACCAACAACCACCTGGACCCGTTTGG...AAGGTTTTGTGTTTCTTTTCTTTCTCCTTCCTTCCTTCCTCCTTCCCTTCTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR CCA 90 bp | AACAACATAAAAAGACAAGATCACATAGAATGCTCATGCACAAACTCACTCACTGGGGAGAACCATGGTTaGCCATGCCAGCCAACCGAG | + |
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Preference number: 4 (lower is better) Translates to: NNIKRQDHIECSCTNSLTGENHG*PCQPTE Trigger: CTCGGTTGGCTGGCATGGCCAACCATGGTTCTCCCC...AGTGAGTGAGTTTGTGCATGAGCATTCTATGTGATCTTGTCTTTTTATGTTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR GCA 90 bp | AAGACAAGATCACATAGAATGCTCATGCACAAACTCACTCACTCACTCACTCACTATAGGGGTGCTCCGTaGTGGAACATTCCTCATCTT | + |
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Preference number: 4 (lower is better) Translates to: KTRSHRMLMHKLTHSLTHYRGAP*WNIPHL Trigger: AAGATGAGGAATGTTCCAGCACGGAGCACCCCTATA...GTGAGTGAGTGAGTGAGTGAGTTTGTGCATGAGCATTCTATGTGATCTTGTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR CCA 90 bp | AGAAGAAGGGAAGGAGGAAGGAAGGAAGGAGAAAGAAAAGAAACACAAAACCTTTCTGTGCCCACTTCGTaGAACTTCAGCCACAGTTCA | + |
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Preference number: 4 (lower is better) Translates to: RRREGGRKEGERKETQNLSVPTS*NFSHSS Trigger: TGAACTGTGGCTGAAGTTCCACGAAGTGGGCACAGA...AAGGTTTTGTGTTTCTTTTCTTTCTCCTTCCTTCCTTCCTCCTTCCCTTCTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR CCA 90 bp | CATAAAAAGACAAGATCACATAGAATGCTCATGCACAAACTCACTCACTCACTCTGCCCCGAAAGCCTTTaGCGAAGGGGTTGTTCTCAA | + |
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Preference number: 4 (lower is better) Translates to: HKKTRSHRMLMHKLTHSLCPESL*RRGCSQ Trigger: TTGAGAACAACCCCTTCGCCAAAGGCTTTCGGGGCA...GAGTGAGTGAGTGAGTTTGTGCATGAGCATTCTATGTGATCTTGTCTTTTTATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR CCA 90 bp | GGTCAGCCCCCAGGCTGGGTTTCATGTTACTACTTAATTAGAATTCCTATTTATACTGGGACCCTAAATTaGATGAGGTGGAGAGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: GQPPGWVSCYYLIRIPIYTGTLN*MRWREL Trigger: GAGCTCTCTCCACCTCATCCAATTTAGGGTCCCAGT...ATAAATAGGAATTCTAATTAAGTAGTAACATGAAACCCAGCCTGGGGGCTGACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR CCA 90 bp | AAAGGAAAGAGAGAGAGAGAGAGAGAGAGAGCGCACAAACACAGTTTTGAGTACTTCTCACACTGGTACTaGGACCCTAAATTGGATGAG | + |
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Preference number: 4 (lower is better) Translates to: KGKRERERERAHKHSFEYFSHWY*DPKLDE Trigger: CTCATCCAATTTAGGGTCCCAGTACCAGTGTGAGAA...GTACTCAAAACTGTGTTTGTGCGCTCTCTCTCTCTCTCTCTCTCTCTTTCCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR TCA 90 bp | AGAAGAAGGGAAGGAGGAAGGAAGGAAGGAGAAAGAAAAGAAACACAAAACCTTCATGAAGAAACACCTTaGTTCCTTCCATGCCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: RRREGGRKEGERKETQNLHEETP*FLPCPA Trigger: AGCAGGGCATGGAAGGAATCAAGGTGTTTCTTCATG...AAGGTTTTGTGTTTCTTTTCTTTCTCCTTCCTTCCTTCCTCCTTCCCTTCTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR CCA 90 bp | AAGACAAGATCACATAGAATGCTCATGCACAAACTCACTCACTCACTCACTCACACACCATTCTCACACTaGTACTGGGACCCTAAATTG | + |
|
Preference number: 4 (lower is better) Translates to: KTRSHRMLMHKLTHSLTHTPFSH*YWDPKL Trigger: CAATTTAGGGTCCCAGTACCAGTGTGAGAATGGTGT...GTGAGTGAGTGAGTGAGTGAGTTTGTGCATGAGCATTCTATGTGATCTTGTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR TCA 90 bp | GGACTCGACACTCTTTCTGTTTCTCCTATCGGTTCTGAGACATCGAGTCACAATCGGGAACAATATCCATaGGAAGAATATACTTCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GLDTLSVSPIGSETSSHNREQYP*EEYTSF Trigger: AAACGAAGTATATTCTTCTCATGGATATTGTTCCCG...ATTGTGACTCGATGTCTCAGAACCGATAGGAGAAACAGAAAGAGTGTCGAGTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS TCA 90 bp | GCCAGTCTGAGGCCCGCACTGCCTGACCACAGGCTGATGGGCCACTaGGGTCTGGTGCTGAAACATCCCTTCGCCGAGCTGGGGAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: ASLRPALPDHRLMGH*GLVLKHPFAELGRT Trigger: GGTTCTCCCCAGCTCGGCGAAGGGATGTTTCAGCACCAGACCTCAGTGGCCCATCAGCCTGTGGTCAGGCAGTGCGGGCCTCAGACTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS TCA 90 bp | CATGGTTGGCCATGCCAGCCAACCGAGGGACCAGGGGCCCCGAGGTaGAATGAGCGGAGAAGTGCTGGTAGGGAAGACGGTCCATGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: HGWPCQPTEGPGAPR*NERRSAGREDGPWA Trigger: AGCCCATGGACCGTCTTCCCTACCAGCACTTCTCCGCTCATTTCACCTCGGGGCCCCTGGTCCCTCGGTTGGCTGGCATGGCCAACCATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS CCA 90 bp | TGCTCCTGGGCCAGTGGGTATGGGTTAGGTGGGGGCAGAAGGTCCTaGGAGGGGCCAGAGACACCATTCTCACACTGGTACTGGGACCCT | + |
|
Preference number: 5 (lower is better) Translates to: CSWASGYGLGGGRRS*EGPETPFSHWYWDP Trigger: AGGGTCCCAGTACCAGTGTGAGAATGGTGTCTCTGGCCCCTCCCAGGACCTTCTGCCCCCACCTAACCCATACCCACTGGCCCAGGAGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS TCA 90 bp | CGGAGAAGTGCTGGTAGGGAAGACGGTCCATGGGCTGCACGGTGGTaGCGGTACAGCTGCTATAGGAGGGCATGCTGGGCCATGTGTTAC | + |
|
Preference number: 5 (lower is better) Translates to: RRSAGREDGPWAARW*RYSCYRRACWAMCY Trigger: GTAACACATGGCCCAGCATGCCCTCCTATAGCAGCTGTACCGTCACCACCGTGCAGCCCATGGACCGTCTTCCCTACCAGCACTTCTCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS CCA 90 bp | GAGCCCCCAGAGCACTCTCAGGTTTCGAATCGCAAGACCTGTCTTTaGAATCAGGCTCCAGAGGCGTGCGCGCCAGGCCAAAGCCCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: EPPEHSQVSNRKTCL*NQAPEACAPGQSPH Trigger: ATGAGGGCTTTGGCCTGGCGCGCACGCCTCTGGAGCCTGATTCCAAAGACAGGTCTTGCGATTCGAAACCTGAGAGTGCTCTGGGGGCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018407.10 ENSMUST00000202504.3 ENSMUST00000202723.4 |
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| CDS CCA 90 bp | CTCCGGTTGCTGGGGAGTCCGGGTGCACGTAAAGGCGCCCCGGCATaGCAGGCTCTGCTTTGCCAGTTACGGACCATTTGTTATCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LRLLGSPGARKGAPA*QALLCQLRTICYQQ Trigger: TTGCTGATAACAAATGGTCCGTAACTGGCAAAGCAGAGCCTGCCATGCCGGGGCGCCTTTACGTGCACCCGGACTCCCCAGCAACCGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018407.10 ENSMUST00000202504.3 |
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| CDS GCA 90 bp | GCTCGGGTCTCGCTGCTGAAGGGGCTGTGGTTGGAGGTGACTTTGTaGCTCACTGTGCTCCTGGGAACCACAGGATACTCTTTACTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: ARVSLLKGLWLEVTL*LTVLLGTTGYSLLC Trigger: GCAAAGTAAAGAGTATCCTGTGGTTCCCAGGAGCACAGTGAGGCACAAAGTCACCTCCAACCACAGCCCCTTCAGCAGCGAGACCCGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS GCA 90 bp | AGTCCGGGTGCACGTAAAGGCGCCCCGGCATGGCAGGCTCTGCTTTaGCAGTTACGGACCATTTGTTATCAGCAAATTTATATCTGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SPGARKGAPAWQALL*QLRTICYQQIYICG Trigger: ACCACAGATATAAATTTGCTGATAACAAATGGTCCGTAACTGGCAAAGCAGAGCCTGCCATGCCGGGGCGCCTTTACGTGCACCCGGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018407.10 ENSMUST00000202504.3 |
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| CDS-3UTR CAA 90 bp | AAGACAAGATCACATAGAATGCTCATGCACAAACTCACTCACTCACTCACTCACGGGGATGATGGAGACTaGCTGGGAGCCCCCAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: KTRSHRMLMHKLTHSLTHGDDGD*LGAPRA Trigger: TGCTCTGGGGGCTCCCAGCAAGTCTCCATCATCCCC...GTGAGTGAGTGAGTGAGTGAGTTTGTGCATGAGCATTCTATGTGATCTTGTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR CAA 90 bp | GGACTCGACACTCTTTCTGTTTCTCCTATCGGTTCTGAGACATCGAGTCACAATCTGGAAGGAGACAAGTaGTCGCATCCAGTGGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GLDTLSVSPIGSETSSHNLEGDK*SHPVGS Trigger: GGAGCCCACTGGATGCGACAACTTGTCTCCTTCCAG...ATTGTGACTCGATGTCTCAGAACCGATAGGAGAAACAGAAAGAGTGTCGAGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR CAA 90 bp | CTTTCTGTTTCTCCTATCGGTTCTGAGACATCGAGTCACAATTTTGGAATGGTGGGTACAGTGGTAAATTaGGCTGTGCTCCTGGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LSVSPIGSETSSHNFGMVGTVVN*AVLLGQ Trigger: CTGGCCCAGGAGCACAGCCAAATTTACCACTGTACC...CACCATTCCAAAATTGTGACTCGATGTCTCAGAACCGATAGGAGAAACAGAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR CAA 90 bp | CATAAAAAGACAAGATCACATAGAATGCTCATGCACAAACTCACTCACTCACTCTCGCAAGACCTGTCTTaGGAATCAGGCTCCAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: HKKTRSHRMLMHKLTHSLSQDLS*ESGSRG Trigger: GCCTCTGGAGCCTGATTCCAAAGACAGGTCTTGCGA...GAGTGAGTGAGTGAGTTTGTGCATGAGCATTCTATGTGATCTTGTCTTTTTATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR CAA 90 bp | GGTCAGCCCCCAGGCTGGGTTTCATGTTACTACTTAATTAGAATTCCTATTTATATGGCAGGCTCTGCTTaGCCAGTTACGGACCATTTG | + |
|
Preference number: 5 (lower is better) Translates to: GQPPGWVSCYYLIRIPIYMAGSA*PVTDHL Trigger: CAAATGGTCCGTAACTGGCAAAGCAGAGCCTGCCAT...ATAAATAGGAATTCTAATTAAGTAGTAACATGAAACCCAGCCTGGGGGCTGACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS-3UTR CAA 90 bp | AAAGGAAAGAGAGAGAGAGAGAGAGAGAGAGCGCACAAACACAGTTTTGAGTACAGAATATACTTCGTTTaGGGATTAAGGCCAGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: KGKRERERERAHKHSFEYRIYFV*GLRPVT Trigger: GGTGACTGGCCTTAATCCCAAAACGAAGTATATTCT...GTACTCAAAACTGTGTTTGTGCGCTCTCTCTCTCTCTCTCTCTCTCTTTCCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS GCA 90 bp | AGTTACGGACCATTTGTTATCAGCAAATTTATATCTGTGGTCGTCTaGGGGAACAATATCCATGAGAAGAATATACTTCGTTTTGGGATT | + |
|
Preference number: 5 (lower is better) Translates to: SYGPFVISKFISVVV*GNNIHEKNILRFGI Trigger: AATCCCAAAACGAAGTATATTCTTCTCATGGATATTGTTCCCGCAGACGACCACAGATATAAATTTGCTGATAACAAATGGTCCGTAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018407.10 ENSMUST00000202504.3 |
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| CDS CCA 72 bp | CAGGGTCCTGGGCACGCCGTGAGTGTAGAGAAACTCTaGGGGCTGGAGGCCGCCCGGAGACTGAAGGCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: QGPGHAVSVEKL*GLEAARRLKAS Trigger: ACTGGCCTTCAGTCTCCGGGCGGCCTCCAGCCCCCAGAGTTTCTCTACACTCACGGCGTGCCCAGGACCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS TCA 72 bp | GCTGGTAGGGAAGACGGTCCATGGGCTGCACGGTGGTaGCGGTACAGCTGCTATAGGAGGGCATGCTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: AGREDGPWAARW*RYSCYRRACWA Trigger: GGCCCAGCATGCCCTCCTATAGCAGCTGTACCGTCACCACCGTGCAGCCCATGGACCGTCTTCCCTACCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS TCA 72 bp | CCATGCCAGCCAACCGAGGGACCAGGGGCCCCGAGGTaGAATGAGCGGAGAAGTGCTGGTAGGGAAGACGGT | + |
|
Preference number: 6 (lower is better) Translates to: PCQPTEGPGAPR*NERRSAGREDG Trigger: ACCGTCTTCCCTACCAGCACTTCTCCGCTCATTTCACCTCGGGGCCCCTGGTCCCTCGGTTGGCTGGCATGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS TCA 72 bp | AGGCCCGCACTGCCTGACCACAGGCTGATGGGCCACTaGGGTCTGGTGCTGAAACATCCCTTCGCCGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RPALPDHRLMGH*GLVLKHPFAEL Trigger: CAGCTCGGCGAAGGGATGTTTCAGCACCAGACCTCAGTGGCCCATCAGCCTGTGGTCAGGCAGTGCGGGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS CCA 72 bp | CTGGGGAGTCCGGGTGCACGTAAAGGCGCCCCGGCATaGCAGGCTCTGCTTTGCCAGTTACGGACCATTTGT | + |
|
Preference number: 6 (lower is better) Translates to: LGSPGARKGAPA*QALLCQLRTIC Trigger: ACAAATGGTCCGTAACTGGCAAAGCAGAGCCTGCCATGCCGGGGCGCCTTTACGTGCACCCGGACTCCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018407.10 ENSMUST00000202504.3 |
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| CDS CCA 72 bp | GTGGAGAGAGCTCGGGTCTCGCTGCTGAAGGGGCTGTaGTTGGAGGTGACTTTGTGCCTCACTGTGCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: VERARVSLLKGL*LEVTLCLTVLL Trigger: CAGGAGCACAGTGAGGCACAAAGTCACCTCCAACCACAGCCCCTTCAGCAGCGAGACCCGAGCTCTCTCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS CAA 90 bp | GAGGGGCCAGAGACACCATTCTCACACTGGTACTGGGACCCTAAATaGGATGAGGTGGAGAGAGCTCGGGTCTCGCTGCTGAAGGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: EGPETPFSHWYWDPK*DEVERARVSLLKGL Trigger: CAGCCCCTTCAGCAGCGAGACCCGAGCTCTCTCCACCTCATCCAATTTAGGGTCCCAGTACCAGTGTGAGAATGGTGTCTCTGGCCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS CCA 72 bp | GGTACAGTGGTAAATTTGGCTGTGCTCCTGGGCCAGTaGGTATGGGTTAGGTGGGGGCAGAAGGTCCTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: GTVVNLAVLLGQ*VWVRWGQKVLG Trigger: TCCCAGGACCTTCTGCCCCCACCTAACCCATACCCACTGGCCCAGGAGCACAGCCAAATTTACCACTGTACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS GCA 72 bp | CGGGTGCACGTAAAGGCGCCCCGGCATGGCAGGCTCTaGTTTGCCAGTTACGGACCATTTGTTATCAGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: RVHVKAPRHGRL*FASYGPFVISK Trigger: TTTGCTGATAACAAATGGTCCGTAACTGGCAAAGCAGAGCCTGCCATGCCGGGGCGCCTTTACGTGCACCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018407.10 ENSMUST00000202504.3 |
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| CDS GCA 72 bp | TCGCTGCTGAAGGGGCTGTGGTTGGAGGTGACTTTGTaGCTCACTGTGCTCCTGGGAACCACAGGATACTCT | + |
|
Preference number: 6 (lower is better) Translates to: SLLKGLWLEVTL*LTVLLGTTGYS Trigger: AGAGTATCCTGTGGTTCCCAGGAGCACAGTGAGGCACAAAGTCACCTCCAACCACAGCCCCTTCAGCAGCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS CCA 72 bp | TGGGAGGGGCCAGAGACACCATTCTCACACTGGTACTaGGACCCTAAATTGGATGAGGTGGAGAGAGCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: WEGPETPFSHWY*DPKLDEVERAR Trigger: CCGAGCTCTCTCCACCTCATCCAATTTAGGGTCCCAGTACCAGTGTGAGAATGGTGTCTCTGGCCCCTCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS CCA 72 bp | AGGTCCTGGGAGGGGCCAGAGACACCATTCTCACACTaGTACTGGGACCCTAAATTGGATGAGGTGGAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: RSWEGPETPFSH*YWDPKLDEVER Trigger: TCTCTCCACCTCATCCAATTTAGGGTCCCAGTACCAGTGTGAGAATGGTGTCTCTGGCCCCTCCCAGGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS CAA 90 bp | CGTGCTGGAACATTCCTCATCTTTCCTCTTGGTACAGTGGTAAATTaGGCTGTGCTCCTGGGCCAGTGGGTATGGGTTAGGTGGGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RAGTFLIFPLGTVVN*AVLLGQWVWVRWGQ Trigger: CTGCCCCCACCTAACCCATACCCACTGGCCCAGGAGCACAGCCAAATTTACCACTGTACCAAGAGGAAAGATGAGGAATGTTCCAGCACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS GCA 72 bp | GCATCCGAGACATCCTGTGTAACTCCAGGTCATCACTaGCCCGAAAGCCTTTGGCGAAGGGGTTGTTCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: ASETSCVTPGHH*PESLWRRGCSQ Trigger: TTGAGAACAACCCCTTCGCCAAAGGCTTTCGGGGCAGTGATGACCTGGAGTTACACAGGATGTCTCGGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS GCA 72 bp | GCACGTAAAGGCGCCCCGGCATGGCAGGCTCTGCTTTaGCAGTTACGGACCATTTGTTATCAGCAAATTTAT | + |
|
Preference number: 6 (lower is better) Translates to: ARKGAPAWQALL*QLRTICYQQIY Trigger: ATAAATTTGCTGATAACAAATGGTCCGTAACTGGCAAAGCAGAGCCTGCCATGCCGGGGCGCCTTTACGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018407.10 ENSMUST00000202504.3 |
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| CDS CCA 72 bp | GAAGTCACAGCGATAAAAGCTGTCTCCGGGAAGACGTaGGTGCAAAACGCAGTGTTCTTTGAACCGAACCCA | + |
|
Preference number: 6 (lower is better) Translates to: EVTAIKAVSGKT*VQNAVFFEPNP Trigger: TGGGTTCGGTTCAAAGAACACTGCGTTTTGCACCCACGTCTTCCCGGAGACAGCTTTTATCGCTGTGACTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018407.10 ENSMUST00000202504.3 |
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| CDS GCA 72 bp | ACTGTGCTCCTGGGAACCACAGGATACTCTTTACTTTaGATCCGAGACATCCTGTGTAACTCCAGGTCATCA | + |
|
Preference number: 6 (lower is better) Translates to: TVLLGTTGYSLL*IRDILCNSRSS Trigger: TGATGACCTGGAGTTACACAGGATGTCTCGGATGCAAAGTAAAGAGTATCCTGTGGTTCCCAGGAGCACAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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| CDS GCA 72 bp | ATGTCTCCATGTACGGCTTCTTATAGGGGTGCTCCGTaGTGGAACATTCCTCATCTTTCCTCTTGGTACAGT | + |
|
Preference number: 6 (lower is better) Translates to: MSPCTASYRGAP*WNIPHLSSWYS Trigger: ACTGTACCAAGAGGAAAGATGAGGAATGTTCCAGCACGGAGCACCCCTATAAGAAGCCGTACATGGAGACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018407.10 |
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