Pregenerated sensors for TBX4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000094Ensembl transcript IDs: ENSMUST00000000096.12, ENSMUST00000108045.3, ENSMUST00000108047.8
Found 187 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCCAGGTGACTCCTGAGCCCTCTACTTCTATCCCACCCAGGGCATaGCAAGAGATGTCAGCTAATGGTGGACTCGGCTCCTGTAGCCAA | + |
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Preference number: 1 (lower is better) Translates to: LQVTPEPSTSIPPRA*QEMSANGGLGSCSQ Trigger: TTGGCTACAGGAGCCGAGTCCACCATTAGCTGACATCTCTTGGCATGCCCTGGGTGGGATAGAAGTAGAGGGCTCAGGAGTCACCTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| 3UTR CCA 90 bp | ACACACACACATTCTGAAATACCTTTCCATGTTTCTTGGCAGTGCTaGCCACCCACAGAGATTAACACTGGATTGACATGGCCCTGGGGC | + |
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Preference number: 1 (lower is better) Translates to: THTHSEIPFHVSWQC*PPTEINTGLTWPWG Trigger: GCCCCAGGGCCATGTCAATCCAGTGTTAATCTCTGTGGGTGGCCAGCACTGCCAAGAAACATGGAAAGGTATTTCAGAATGTGTGTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| 3UTR GCA 90 bp | CACACACACACACATTCTGAAATACCTTTCCATGTTTCTTGGCAGTaGTGGCCACCCACAGAGATTAACACTGGATTGACATGGCCCTGG | + |
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Preference number: 1 (lower is better) Translates to: HTHTHSEIPFHVSWQ*WPPTEINTGLTWPW Trigger: CCAGGGCCATGTCAATCCAGTGTTAATCTCTGTGGGTGGCCAGCACTGCCAAGAAACATGGAAAGGTATTTCAGAATGTGTGTGTGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| 3UTR TCA 90 bp | TTTCTTGTTTTGGCCTTAGTTGCATGTCAGAAGACAGATGCTCTCTaGCCACATGTGTGTAGAAGTTCAAGCACGCGCACACACCACACA | + |
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Preference number: 1 (lower is better) Translates to: FLVLALVACQKTDAL*PHVCRSSSTRTHHT Trigger: TGTGTGGTGTGTGCGCGTGCTTGAACTTCTACACACATGTGGTCAGAGAGCATCTGTCTTCTGACATGCAACTAAGGCCAAAACAAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| 3UTR-3UTR CCA 90 bp | GCCGGCATCCTCGCTCCAGGCATGTATGTAGGTTTTCTGGGAGCAGAGCCAGTCGGCAGCTCCCCGTGCTaGTGGAAGACCAGGGAGTCT | + |
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Preference number: 2 (lower is better) Translates to: AGILAPGMYVGFLGAEPVGSSPC*WKTRES Trigger: AGACTCCCTGGTCTTCCACCAGCACGGGGAGCTGCC...GACTGGCTCTGCTCCCAGAAAACCTACATACATGCCTGGAGCGAGGATGCCGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| 3UTR-3UTR TCA 90 bp | AACACTCAAGTACTTTCTCTCAGCTGTCCATCTTCTGCCAGCCGGCATCCTCGCCGGGTAAGGGGCGTCTaGCTGCCCATCCTGGGATGC | + |
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Preference number: 2 (lower is better) Translates to: NTQVLSLSCPSSASRHPRRVRGV*LPILGC Trigger: GCATCCCAGGATGGGCAGTCAGACGCCCCTTACCCG...GCGAGGATGCCGGCTGGCAGAAGATGGACAGCTGAGAGAAAGTACTTGAGTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| 3UTR-3UTR GCA 90 bp | GCCGGCATCCTCGCTCCAGGCATGTATGTAGGTTTTCTGGGAGCAGAGCCAGTCGAAAGGCCCTCCCTGTaGCAGAGATCTCACTTGGCC | + |
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Preference number: 2 (lower is better) Translates to: AGILAPGMYVGFLGAEPVERPSL*QRSHLA Trigger: GGCCAAGTGAGATCTCTGGCACAGGGAGGGCCTTTC...GACTGGCTCTGCTCCCAGAAAACCTACATACATGCCTGGAGCGAGGATGCCGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| 3UTR-3UTR CCA 90 bp | GCCGGCATCCTCGCTCCAGGCATGTATGTAGGTTTTCTGGGAGCAGAGCCAGTCTTCTGTTCCCCAAAGTaGCAGCTCCCCGTGCTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: AGILAPGMYVGFLGAEPVFCSPK*QLPVLV Trigger: CACCAGCACGGGGAGCTGCCACTTTGGGGAACAGAA...GACTGGCTCTGCTCCCAGAAAACCTACATACATGCCTGGAGCGAGGATGCCGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| 3UTR-3UTR CCA 90 bp | GCCGGCATCCTCGCTCCAGGCATGTATGTAGGTTTTCTGGGAGCAGAGCCAGTCTCTGACTGCCCATCCTaGGATGCAGACGGTGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: AGILAPGMYVGFLGAEPVSDCPS*DADGVS Trigger: GGAGACACCGTCTGCATCCCAGGATGGGCAGTCAGA...GACTGGCTCTGCTCCCAGAAAACCTACATACATGCCTGGAGCGAGGATGCCGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| 3UTR-3UTR TCA 90 bp | AACACTCAAGTACTTTCTCTCAGCTGTCCATCTTCTGCCAGCCGGCATCCTCGCCGGTGTCTCCCAGGCTaGGAGGGAGGCCACATGCTA | + |
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Preference number: 2 (lower is better) Translates to: NTQVLSLSCPSSASRHPRRCLPG*EGGHML Trigger: TAGCATGTGGCCTCCCTCTCAGCCTGGGAGACACCG...GCGAGGATGCCGGCTGGCAGAAGATGGACAGCTGAGAGAAAGTACTTGAGTGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| 3UTR-3UTR GCA 90 bp | CTGAGCTTGAACACTCAAGTACTTTCTCTCAGCTGTCCATCTTCTGCCAGCCGGCTGCCCATCCTGGGATaGAGACGGTGTCTCCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: LSLNTQVLSLSCPSSASRLPILG*RRCLPG Trigger: GCCTGGGAGACACCGTCTGCATCCCAGGATGGGCAG...CCGGCTGGCAGAAGATGGACAGCTGAGAGAAAGTACTTGAGTGTTCAAGCTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| 3UTR-3UTR CCA 90 bp | CTGAGCTTGAACACTCAAGTACTTTCTCTCAGCTGTCCATCTTCTGCCAGCCGGGGCAGCTCCCCGTGCTaGTGGAAGACCAGGGAGTCT | + |
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Preference number: 2 (lower is better) Translates to: LSLNTQVLSLSCPSSASRGSSPC*WKTRES Trigger: AGACTCCCTGGTCTTCCACCAGCACGGGGAGCTGCC...CCGGCTGGCAGAAGATGGACAGCTGAGAGAAAGTACTTGAGTGTTCAAGCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| 3UTR-3UTR TCA 90 bp | GGGATGATATGCTCCTCTGAGCTTGAACACTCAAGTACTTTCTCTCAGCTGTCCCGGGTAAGGGGCGTCTaGCTGCCCATCCTGGGATGC | + |
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Preference number: 2 (lower is better) Translates to: GMICSSELEHSSTFSQLSRVRGV*LPILGC Trigger: GCATCCCAGGATGGGCAGTCAGACGCCCCTTACCCG...GGACAGCTGAGAGAAAGTACTTGAGTGTTCAAGCTCAGAGGAGCATATCATCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| 3UTR-3UTR CCA 90 bp | GCCGGCATCCTCGCTCCAGGCATGTATGTAGGTTTTCTGGGAGCAGAGCCAGTCGTTTCTTGGCAGTGCTaGCCACCCACAGAGATTAAC | + |
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Preference number: 2 (lower is better) Translates to: AGILAPGMYVGFLGAEPVVSWQC*PPTEIN Trigger: GTTAATCTCTGTGGGTGGCCAGCACTGCCAAGAAAC...GACTGGCTCTGCTCCCAGAAAACCTACATACATGCCTGGAGCGAGGATGCCGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| 3UTR-3UTR CCA 90 bp | AACACTCAAGTACTTTCTCTCAGCTGTCCATCTTCTGCCAGCCGGCATCCTCGCAGCTCCCCGTGCTGGTaGAAGACCAGGGAGTCTATG | + |
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Preference number: 2 (lower is better) Translates to: NTQVLSLSCPSSASRHPRSSPCW*KTRESM Trigger: CATAGACTCCCTGGTCTTCCACCAGCACGGGGAGCT...GCGAGGATGCCGGCTGGCAGAAGATGGACAGCTGAGAGAAAGTACTTGAGTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| 3UTR-3UTR TCA 90 bp | GGGATGATATGCTCCTCTGAGCTTGAACACTCAAGTACTTTCTCTCAGCTGTCCCGGTGTCTCCCAGGCTaGGAGGGAGGCCACATGCTA | + |
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Preference number: 2 (lower is better) Translates to: GMICSSELEHSSTFSQLSRCLPG*EGGHML Trigger: TAGCATGTGGCCTCCCTCTCAGCCTGGGAGACACCG...GGACAGCTGAGAGAAAGTACTTGAGTGTTCAAGCTCAGAGGAGCATATCATCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| 3UTR-3UTR GCA 90 bp | CTGAGCTTGAACACTCAAGTACTTTCTCTCAGCTGTCCATCTTCTGCCAGCCGGGAAAGGCCCTCCCTGTaGCAGAGATCTCACTTGGCC | + |
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Preference number: 2 (lower is better) Translates to: LSLNTQVLSLSCPSSASRERPSL*QRSHLA Trigger: GGCCAAGTGAGATCTCTGGCACAGGGAGGGCCTTTC...CCGGCTGGCAGAAGATGGACAGCTGAGAGAAAGTACTTGAGTGTTCAAGCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| 3UTR-3UTR GCA 90 bp | CCTCCCTACTCTGAAGGGATGATATGCTCCTCTGAGCTTGAACACTCAAGTACTCTGCCCATCCTGGGATaGAGACGGTGTCTCCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: PPYSEGMICSSELEHSSTLPILG*RRCLPG Trigger: GCCTGGGAGACACCGTCTGCATCCCAGGATGGGCAG...AGTACTTGAGTGTTCAAGCTCAGAGGAGCATATCATCCCTTCAGAGTAGGGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| 3UTR-3UTR CCA 90 bp | CTGAGCTTGAACACTCAAGTACTTTCTCTCAGCTGTCCATCTTCTGCCAGCCGGTTCTGTTCCCCAAAGTaGCAGCTCCCCGTGCTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: LSLNTQVLSLSCPSSASRFCSPK*QLPVLV Trigger: CACCAGCACGGGGAGCTGCCACTTTGGGGAACAGAA...CCGGCTGGCAGAAGATGGACAGCTGAGAGAAAGTACTTGAGTGTTCAAGCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| 3UTR-3UTR TCA 90 bp | AACACTCAAGTACTTTCTCTCAGCTGTCCATCTTCTGCCAGCCGGCATCCTCGCTCAGAAAGCTCCAGGTaGCTCCTGAGCCCTCTACTT | + |
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Preference number: 2 (lower is better) Translates to: NTQVLSLSCPSSASRHPRSESSR*LLSPLL Trigger: AAGTAGAGGGCTCAGGAGTCACCTGGAGCTTTCTGA...GCGAGGATGCCGGCTGGCAGAAGATGGACAGCTGAGAGAAAGTACTTGAGTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| 3UTR-3UTR TCA 90 bp | CTCTCAGCTGTCCATCTTCTGCCAGCCGGCATCCTCGCTCCAGGCATGTATGTACGCATGACTCCTTTTTaGAAGTCATGCTTCAGACCC | + |
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Preference number: 2 (lower is better) Translates to: LSAVHLLPAGILAPGMYVRMTPF*KSCFRP Trigger: GGGTCTGAAGCATGACTTTCAAAAAGGAGTCATGCG...TACATACATGCCTGGAGCGAGGATGCCGGCTGGCAGAAGATGGACAGCTGAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| 3UTR-3UTR TCA 90 bp | AACACTCAAGTACTTTCTCTCAGCTGTCCATCTTCTGCCAGCCGGCATCCTCGCGTGACATCAGTCCAGTaGGATCTCCAAGGGACACTG | + |
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Preference number: 2 (lower is better) Translates to: NTQVLSLSCPSSASRHPRVTSVQ*DLQGTL Trigger: CAGTGTCCCTTGGAGATCTCACTGGACTGATGTCAC...GCGAGGATGCCGGCTGGCAGAAGATGGACAGCTGAGAGAAAGTACTTGAGTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| 3UTR-3UTR GCA 90 bp | ACTCCTGAGCCCTCTACTTCTATCCCACCCAGGGCATGCCAAGAGATGTCAGCTCATGTTTCTTGGCAGTaGTGGCCACCCACAGAGATT | + |
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Preference number: 2 (lower is better) Translates to: TPEPSTSIPPRACQEMSAHVSWQ*WPPTEI Trigger: AATCTCTGTGGGTGGCCAGCACTGCCAAGAAACATG...AGCTGACATCTCTTGGCATGCCCTGGGTGGGATAGAAGTAGAGGGCTCAGGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| 3UTR-3UTR GCA 90 bp | GTATCAACACAATCTCCAGAAGCTAAGGGAAGGGGGTGCTTCTGTTCCCCAAAGGAAAGGCCCTCCCTGTaGCAGAGATCTCACTTGGCC | + |
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Preference number: 2 (lower is better) Translates to: VSTQSPEAKGRGCFCSPKERPSL*QRSHLA Trigger: GGCCAAGTGAGATCTCTGGCACAGGGAGGGCCTTTC...CTTTGGGGAACAGAAGCACCCCCTTCCCTTAGCTTCTGGAGATTGTGTTGATAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| 3UTR-3UTR CCA 90 bp | GTATCAACACAATCTCCAGAAGCTAAGGGAAGGGGGTGCTTCTGTTCCCCAAAGAGCTCCCCGTGCTGGTaGAAGACCAGGGAGTCTATG | + |
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Preference number: 2 (lower is better) Translates to: VSTQSPEAKGRGCFCSPKSSPCW*KTRESM Trigger: CATAGACTCCCTGGTCTTCCACCAGCACGGGGAGCT...CTTTGGGGAACAGAAGCACCCCCTTCCCTTAGCTTCTGGAGATTGTGTTGATAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| 3UTR-3UTR TCA 90 bp | CTGAGCTTGAACACTCAAGTACTTTCTCTCAGCTGTCCATCTTCTGCCAGCCGGTCAGAAAGCTCCAGGTaGCTCCTGAGCCCTCTACTT | + |
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Preference number: 2 (lower is better) Translates to: LSLNTQVLSLSCPSSASRSESSR*LLSPLL Trigger: AAGTAGAGGGCTCAGGAGTCACCTGGAGCTTTCTGA...CCGGCTGGCAGAAGATGGACAGCTGAGAGAAAGTACTTGAGTGTTCAAGCTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| 3UTR-3UTR CCA 90 bp | GGGATGATATGCTCCTCTGAGCTTGAACACTCAAGTACTTTCTCTCAGCTGTCCTTCTGTTCCCCAAAGTaGCAGCTCCCCGTGCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: GMICSSELEHSSTFSQLSFCSPK*QLPVLV Trigger: CACCAGCACGGGGAGCTGCCACTTTGGGGAACAGAA...GGACAGCTGAGAGAAAGTACTTGAGTGTTCAAGCTCAGAGGAGCATATCATCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| 3UTR-3UTR CCA 90 bp | GGGATGATATGCTCCTCTGAGCTTGAACACTCAAGTACTTTCTCTCAGCTGTCCTCTGACTGCCCATCCTaGGATGCAGACGGTGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: GMICSSELEHSSTFSQLSSDCPS*DADGVS Trigger: GGAGACACCGTCTGCATCCCAGGATGGGCAGTCAGA...GGACAGCTGAGAGAAAGTACTTGAGTGTTCAAGCTCAGAGGAGCATATCATCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| 3UTR-3UTR TCA 90 bp | CTGAGCTTGAACACTCAAGTACTTTCTCTCAGCTGTCCATCTTCTGCCAGCCGGAGATTAACACTGGATTaGCATGGCCCTGGGGCTGTT | + |
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Preference number: 2 (lower is better) Translates to: LSLNTQVLSLSCPSSASRRLTLD*HGPGAV Trigger: AACAGCCCCAGGGCCATGTCAATCCAGTGTTAATCT...CCGGCTGGCAGAAGATGGACAGCTGAGAGAAAGTACTTGAGTGTTCAAGCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| 3UTR-3UTR GCA 90 bp | CTGAGCTTGAACACTCAAGTACTTTCTCTCAGCTGTCCATCTTCTGCCAGCCGGCATGTTTCTTGGCAGTaGTGGCCACCCACAGAGATT | + |
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Preference number: 2 (lower is better) Translates to: LSLNTQVLSLSCPSSASRHVSWQ*WPPTEI Trigger: AATCTCTGTGGGTGGCCAGCACTGCCAAGAAACATG...CCGGCTGGCAGAAGATGGACAGCTGAGAGAAAGTACTTGAGTGTTCAAGCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTCAGCTGTCCATCTTCTGCCAGCCGGCATCCTCGCTCCAGGCATGTATGTATGTTTTGGCCTTAGTTaGATGTCAGAAGACAGATGC | + |
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Preference number: 2 (lower is better) Translates to: LSAVHLLPAGILAPGMYVCFGLS*MSEDRC Trigger: GCATCTGTCTTCTGACATGCAACTAAGGCCAAAACA...TACATACATGCCTGGAGCGAGGATGCCGGCTGGCAGAAGATGGACAGCTGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| 3UTR-3UTR GCA 90 bp | CTGAGCTTGAACACTCAAGTACTTTCTCTCAGCTGTCCATCTTCTGCCAGCCGGATCCCACCCAGGGCATaGCAAGAGATGTCAGCTAAT | + |
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Preference number: 2 (lower is better) Translates to: LSLNTQVLSLSCPSSASRIPPRA*QEMSAN Trigger: ATTAGCTGACATCTCTTGGCATGCCCTGGGTGGGAT...CCGGCTGGCAGAAGATGGACAGCTGAGAGAAAGTACTTGAGTGTTCAAGCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| 3UTR-3UTR CCA 90 bp | AACACTCAAGTACTTTCTCTCAGCTGTCCATCTTCTGCCAGCCGGCATCCTCGCGCCAGAGATCTCACTTaGCCCCTGAGTAAAACCAAA | + |
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Preference number: 2 (lower is better) Translates to: NTQVLSLSCPSSASRHPRARDLT*PLSKTK Trigger: TTTGGTTTTACTCAGGGGCCAAGTGAGATCTCTGGC...GCGAGGATGCCGGCTGGCAGAAGATGGACAGCTGAGAGAAAGTACTTGAGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| 3UTR-3UTR TCA 90 bp | GTATCAACACAATCTCCAGAAGCTAAGGGAAGGGGGTGCTTCTGTTCCCCAAAGAGATTAACACTGGATTaGCATGGCCCTGGGGCTGTT | + |
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Preference number: 2 (lower is better) Translates to: VSTQSPEAKGRGCFCSPKRLTLD*HGPGAV Trigger: AACAGCCCCAGGGCCATGTCAATCCAGTGTTAATCT...CTTTGGGGAACAGAAGCACCCCCTTCCCTTAGCTTCTGGAGATTGTGTTGATAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| 3UTR-3UTR TCA 90 bp | CTCTCAGCTGTCCATCTTCTGCCAGCCGGCATCCTCGCTCCAGGCATGTATGTACACACACACACATTCTaGAATACCTTTCCATGTTTC | + |
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Preference number: 2 (lower is better) Translates to: LSAVHLLPAGILAPGMYVHTHTF*NTFPCF Trigger: GAAACATGGAAAGGTATTTCAGAATGTGTGTGTGTG...TACATACATGCCTGGAGCGAGGATGCCGGCTGGCAGAAGATGGACAGCTGAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| 3UTR-3UTR CCA 90 bp | GTATCAACACAATCTCCAGAAGCTAAGGGAAGGGGGTGCTTCTGTTCCCCAAAGGTTTCTTGGCAGTGCTaGCCACCCACAGAGATTAAC | + |
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Preference number: 2 (lower is better) Translates to: VSTQSPEAKGRGCFCSPKVSWQC*PPTEIN Trigger: GTTAATCTCTGTGGGTGGCCAGCACTGCCAAGAAAC...CTTTGGGGAACAGAAGCACCCCCTTCCCTTAGCTTCTGGAGATTGTGTTGATAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| 3UTR-3UTR GCA 90 bp | GGGATGATATGCTCCTCTGAGCTTGAACACTCAAGTACTTTCTCTCAGCTGTCCCATGTTTCTTGGCAGTaGTGGCCACCCACAGAGATT | + |
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Preference number: 2 (lower is better) Translates to: GMICSSELEHSSTFSQLSHVSWQ*WPPTEI Trigger: AATCTCTGTGGGTGGCCAGCACTGCCAAGAAACATG...GGACAGCTGAGAGAAAGTACTTGAGTGTTCAAGCTCAGAGGAGCATATCATCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| 3UTR-3UTR GCA 90 bp | GGGATGATATGCTCCTCTGAGCTTGAACACTCAAGTACTTTCTCTCAGCTGTCCATCCCACCCAGGGCATaGCAAGAGATGTCAGCTAAT | + |
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Preference number: 2 (lower is better) Translates to: GMICSSELEHSSTFSQLSIPPRA*QEMSAN Trigger: ATTAGCTGACATCTCTTGGCATGCCCTGGGTGGGAT...GGACAGCTGAGAGAAAGTACTTGAGTGTTCAAGCTCAGAGGAGCATATCATCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCCCTACTCTGAAGGGATGATATGCTCCTCTGAGCTTGAACACTCAAGTACTGTTTCTTGGCAGTGCTaGCCACCCACAGAGATTAAC | + |
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Preference number: 2 (lower is better) Translates to: PPYSEGMICSSELEHSSTVSWQC*PPTEIN Trigger: GTTAATCTCTGTGGGTGGCCAGCACTGCCAAGAAAC...AGTACTTGAGTGTTCAAGCTCAGAGGAGCATATCATCCCTTCAGAGTAGGGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| 3UTR-3UTR TCA 90 bp | CACACACACACACACATTCTGAAATACCTTTCCATGTTTCTTGGCAGTGCTGGCAGATTAACACTGGATTaGCATGGCCCTGGGGCTGTT | + |
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Preference number: 2 (lower is better) Translates to: HTHTHILKYLSMFLGSAGRLTLD*HGPGAV Trigger: AACAGCCCCAGGGCCATGTCAATCCAGTGTTAATCT...GCCAGCACTGCCAAGAAACATGGAAAGGTATTTCAGAATGTGTGTGTGTGTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| 3UTR-3UTR TCA 90 bp | CCAGGCATGTATGTAGGTTTTCTGGGAGCAGAGCCAGTCCAGCGGATATGTGACCACACACACACATTCTaGAATACCTTTCCATGTTTC | + |
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Preference number: 2 (lower is better) Translates to: PGMYVGFLGAEPVQRICDHTHTF*NTFPCF Trigger: GAAACATGGAAAGGTATTTCAGAATGTGTGTGTGTG...GTCACATATCCGCTGGACTGGCTCTGCTCCCAGAAAACCTACATACATGCCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| 3UTR-3UTR CCA 90 bp | GGGATGATATGCTCCTCTGAGCTTGAACACTCAAGTACTTTCTCTCAGCTGTCCGCCAGAGATCTCACTTaGCCCCTGAGTAAAACCAAA | + |
|
Preference number: 2 (lower is better) Translates to: GMICSSELEHSSTFSQLSARDLT*PLSKTK Trigger: TTTGGTTTTACTCAGGGGCCAAGTGAGATCTCTGGC...GGACAGCTGAGAGAAAGTACTTGAGTGTTCAAGCTCAGAGGAGCATATCATCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| 3UTR-3UTR GCA 90 bp | GTATCAACACAATCTCCAGAAGCTAAGGGAAGGGGGTGCTTCTGTTCCCCAAAGTGTTTTGGCCTTAGTTaGATGTCAGAAGACAGATGC | + |
|
Preference number: 2 (lower is better) Translates to: VSTQSPEAKGRGCFCSPKCFGLS*MSEDRC Trigger: GCATCTGTCTTCTGACATGCAACTAAGGCCAAAACA...CTTTGGGGAACAGAAGCACCCCCTTCCCTTAGCTTCTGGAGATTGTGTTGATAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| 3UTR-3UTR TCA 90 bp | CCTCCCTACTCTGAAGGGATGATATGCTCCTCTGAGCTTGAACACTCAAGTACTATCTCACTTGGCCCCTaGGTAAAACCAAAGTACATT | + |
|
Preference number: 2 (lower is better) Translates to: PPYSEGMICSSELEHSSTISLGP*VKPKYI Trigger: AATGTACTTTGGTTTTACTCAGGGGCCAAGTGAGAT...AGTACTTGAGTGTTCAAGCTCAGAGGAGCATATCATCCCTTCAGAGTAGGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCGGCATCCTCGCTCCAGGCATGTATGTAGGTTTTCTGGGAGCAGAGCCAGTCACCTTTCCATGTTTCTaGGCAGTGCTGGCCACCCAC | + |
|
Preference number: 3 (lower is better) Translates to: AGILAPGMYVGFLGAEPVTFPCF*AVLATH Trigger: GTGGGTGGCCAGCACTGCCAAGAAACATGGAAAGGT...GACTGGCTCTGCTCCCAGAAAACCTACATACATGCCTGGAGCGAGGATGCCGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| 3UTR GCA 72 bp | ACTCCTGAGCCCTCTACTTCTATCCCACCCAGGGCATaGCAAGAGATGTCAGCTAATGGTGGACTCGGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: TPEPSTSIPPRA*QEMSANGGLGS Trigger: GGAGCCGAGTCCACCATTAGCTGACATCTCTTGGCATGCCCTGGGTGGGATAGAAGTAGAGGGCTCAGGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| 3UTR CCA 72 bp | GCTTCTGTTCCCCAAAGTGGCAGCTCCCCGTGCTGGTaGAAGACCAGGGAGTCTATGGTAAGCATGGATACC | + |
|
Preference number: 3 (lower is better) Translates to: ASVPQSGSSPCW*KTRESMVSMDT Trigger: GGTATCCATGCTTACCATAGACTCCCTGGTCTTCCACCAGCACGGGGAGCTGCCACTTTGGGGAACAGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| 3UTR CCA 72 bp | GGTGCTTCTGTTCCCCAAAGTGGCAGCTCCCCGTGCTaGTGGAAGACCAGGGAGTCTATGGTAAGCATGGAT | + |
|
Preference number: 3 (lower is better) Translates to: GASVPQSGSSPC*WKTRESMVSMD Trigger: ATCCATGCTTACCATAGACTCCCTGGTCTTCCACCAGCACGGGGAGCTGCCACTTTGGGGAACAGAAGCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| 3UTR TCA 72 bp | AGGTTTTCTGGGAGCAGAGCCAGTCCAGCGGATATGTaGCATCAGTCCAGTGAGATCTCCAAGGGACACTGC | + |
|
Preference number: 3 (lower is better) Translates to: RFSGSRASPADM*HQSSEISKGHC Trigger: GCAGTGTCCCTTGGAGATCTCACTGGACTGATGTCACATATCCGCTGGACTGGCTCTGCTCCCAGAAAACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAGGCATGTATGTAGGTTTTCTGGGAGCAGAGCCAGTCCAGCGGATATGTGACGAGATTAACACTGGATaGACATGGCCCTGGGGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: PGMYVGFLGAEPVQRICDEINTG*TWPWGC Trigger: ACAGCCCCAGGGCCATGTCAATCCAGTGTTAATCTC...GTCACATATCCGCTGGACTGGCTCTGCTCCCAGAAAACCTACATACATGCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| 3UTR-3UTR CAA 90 bp | GTATCAACACAATCTCCAGAAGCTAAGGGAAGGGGGTGCTTCTGTTCCCCAAAGGAGATTAACACTGGATaGACATGGCCCTGGGGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: VSTQSPEAKGRGCFCSPKEINTG*TWPWGC Trigger: ACAGCCCCAGGGCCATGTCAATCCAGTGTTAATCTC...CTTTGGGGAACAGAAGCACCCCCTTCCCTTAGCTTCTGGAGATTGTGTTGATAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGATGATATGCTCCTCTGAGCTTGAACACTCAAGTACTTTCTCTCAGCTGTCCACCTTTCCATGTTTCTaGGCAGTGCTGGCCACCCAC | + |
|
Preference number: 3 (lower is better) Translates to: GMICSSELEHSSTFSQLSTFPCF*AVLATH Trigger: GTGGGTGGCCAGCACTGCCAAGAAACATGGAAAGGT...GGACAGCTGAGAGAAAGTACTTGAGTGTTCAAGCTCAGAGGAGCATATCATCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| 3UTR-3UTR CAA 90 bp | AACACTCAAGTACTTTCTCTCAGCTGTCCATCTTCTGCCAGCCGGCATCCTCGCGCGCATGACTCCTTTTaGAAAGTCATGCTTCAGACC | + |
|
Preference number: 3 (lower is better) Translates to: NTQVLSLSCPSSASRHPRAHDSF*KVMLQT Trigger: GGTCTGAAGCATGACTTTCAAAAAGGAGTCATGCGC...GCGAGGATGCCGGCTGGCAGAAGATGGACAGCTGAGAGAAAGTACTTGAGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| 3UTR TCA 72 bp | AACCAAAGTACATTTCAGAAAGCTCCAGGTGACTCCTaGGCCCTCTACTTCTATCCCACCCAGGGCATGCCA | + |
|
Preference number: 3 (lower is better) Translates to: NQSTFQKAPGDS*ALYFYPTQGMP Trigger: TGGCATGCCCTGGGTGGGATAGAAGTAGAGGGCTCAGGAGTCACCTGGAGCTTTCTGAAATGTACTTTGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGAGCTTGAACACTCAAGTACTTTCTCTCAGCTGTCCATCTTCTGCCAGCCGGGCGCATGACTCCTTTTaGAAAGTCATGCTTCAGACC | + |
|
Preference number: 3 (lower is better) Translates to: LSLNTQVLSLSCPSSASRAHDSF*KVMLQT Trigger: GGTCTGAAGCATGACTTTCAAAAAGGAGTCATGCGC...CCGGCTGGCAGAAGATGGACAGCTGAGAGAAAGTACTTGAGTGTTCAAGCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| 3UTR-3UTR CAA 90 bp | CACACACACACACACATTCTGAAATACCTTTCCATGTTTCTTGGCAGTGCTGGCGAGATTAACACTGGATaGACATGGCCCTGGGGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: HTHTHILKYLSMFLGSAGEINTG*TWPWGC Trigger: ACAGCCCCAGGGCCATGTCAATCCAGTGTTAATCTC...GCCAGCACTGCCAAGAAACATGGAAAGGTATTTCAGAATGTGTGTGTGTGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| 3UTR TCA 72 bp | CACCACACACACACACACACACACACACACACATTCTaGAATACCTTTCCATGTTTCTTGGCAGTGCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: HHTHTHTHTHTF*NTFPCFLAVLA Trigger: GGCCAGCACTGCCAAGAAACATGGAAAGGTATTTCAGAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| 3UTR TCA 72 bp | TTGGCCTTAGTTGCATGTCAGAAGACAGATGCTCTCTaGCCACATGTGTGTAGAAGTTCAAGCACGCGCACA | + |
|
Preference number: 3 (lower is better) Translates to: LALVACQKTDAL*PHVCRSSSTRT Trigger: TGTGCGCGTGCTTGAACTTCTACACACATGTGGTCAGAGAGCATCTGTCTTCTGACATGCAACTAAGGCCAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| 3UTR GCA 72 bp | CAAGGATACTCCCCTCCCTACTCTGAAGGGATGATATaGTCCTCTGAGCTTGAACACTCAAGTACTTTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: QGYSPPYSEGMI*SSELEHSSTFS Trigger: AGAGAAAGTACTTGAGTGTTCAAGCTCAGAGGAGCATATCATCCCTTCAGAGTAGGGAGGGGAGTATCCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| 3UTR CCA 72 bp | CATTCTGAAATACCTTTCCATGTTTCTTGGCAGTGCTaGCCACCCACAGAGATTAACACTGGATTGACATGG | + |
|
Preference number: 3 (lower is better) Translates to: HSEIPFHVSWQC*PPTEINTGLTW Trigger: CCATGTCAATCCAGTGTTAATCTCTGTGGGTGGCCAGCACTGCCAAGAAACATGGAAAGGTATTTCAGAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| 3UTR GCA 72 bp | ACACATTCTGAAATACCTTTCCATGTTTCTTGGCAGTaGTGGCCACCCACAGAGATTAACACTGGATTGACA | + |
|
Preference number: 3 (lower is better) Translates to: THSEIPFHVSWQ*WPPTEINTGLT Trigger: TGTCAATCCAGTGTTAATCTCTGTGGGTGGCCAGCACTGCCAAGAAACATGGAAAGGTATTTCAGAATGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR TCA 90 bp | AACACTCAAGTACTTTCTCTCAGCTGTCCATCTTCTGCCAGCCGGCATCCTCGCCTGGGCCCGGGGCCCTaGAGGCCTCCTCGCTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: NTQVLSLSCPSSASRHPRLGPGP*RPPRSR Trigger: CCGAGAGCGAGGAGGCCTTCAGGGCCCCGGGCCCAG...GCGAGGATGCCGGCTGGCAGAAGATGGACAGCTGAGAGAAAGTACTTGAGTGTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000096.12 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCAGCTGTCCATCTTCTGCCAGCCGGCATCCTCGCTCCAGGCATGTATGTAACAGCTCAGTGGGGGTaGGGGCAGGTCGTCCACGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSAVHLLPAGILAPGMYVTAQWG*GQVVHG Trigger: GCCGTGGACGACCTGCCCCCACCCCCACTGAGCTGT...TACATACATGCCTGGAGCGAGGATGCCGGCTGGCAGAAGATGGACAGCTGAGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | GCCGGCATCCTCGCTCCAGGCATGTATGTAGGTTTTCTGGGAGCAGAGCCAGTCTTGAGGGGCAGGTCCTaGGGCTCTGCAGCAGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: AGILAPGMYVGFLGAEPVLRGRS*GSAAAN Trigger: GTTTGCTGCTGCAGAGCCCCAGGACCTGCCCCTCAA...GACTGGCTCTGCTCCCAGAAAACCTACATACATGCCTGGAGCGAGGATGCCGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | AACACTCAAGTACTTTCTCTCAGCTGTCCATCTTCTGCCAGCCGGCATCCTCGCACAGCTCAGTGGGGGTaGGGGCAGGTCGTCCACGGC | + |
|
Preference number: 4 (lower is better) Translates to: NTQVLSLSCPSSASRHPRTAQWG*GQVVHG Trigger: GCCGTGGACGACCTGCCCCCACCCCCACTGAGCTGT...GCGAGGATGCCGGCTGGCAGAAGATGGACAGCTGAGAGAAAGTACTTGAGTGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGCATGTATGTAGGTTTTCTGGGAGCAGAGCCAGTCCAGCGGATATGTGACGTGGGCATTTCCTGGTaGCTGGGCGCTCTGGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: PGMYVGFLGAEPVQRICDVGISW*LGALGG Trigger: GCCGCCCAGAGCGCCCAGCCACCAGGAAATGCCCAC...GTCACATATCCGCTGGACTGGCTCTGCTCCCAGAAAACCTACATACATGCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR TCA 90 bp | CACACACACACACACATTCTGAAATACCTTTCCATGTTTCTTGGCAGTGCTGGCCTGGGCCCGGGGCCCTaGAGGCCTCCTCGCTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHILKYLSMFLGSAGLGPGP*RPPRSR Trigger: CCGAGAGCGAGGAGGCCTTCAGGGCCCCGGGCCCAG...GCCAGCACTGCCAAGAAACATGGAAAGGTATTTCAGAATGTGTGTGTGTGTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000096.12 ENSMUST00000108047.8 |
||
| CDS-3UTR GCA 90 bp | GCCGGCATCCTCGCTCCAGGCATGTATGTAGGTTTTCTGGGAGCAGAGCCAGTCCAGGTCCTGGGGCTCTaGAGCAGCAAACTGCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: AGILAPGMYVGFLGAEPVQVLGL*SSKLHV Trigger: CACATGCAGTTTGCTGCTGCAGAGCCCCAGGACCTG...GACTGGCTCTGCTCCCAGAAAACCTACATACATGCCTGGAGCGAGGATGCCGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR GCA 90 bp | CTCTCAGCTGTCCATCTTCTGCCAGCCGGCATCCTCGCTCCAGGCATGTATGTACCAGGTAGGATCGCTTaGAGGGCAAGTCCAGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSAVHLLPAGILAPGMYVPGRIA*RASPGG Trigger: GCCACCTGGACTTGCCCTGCAAGCGATCCTACCTGG...TACATACATGCCTGGAGCGAGGATGCCGGCTGGCAGAAGATGGACAGCTGAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCAGCTGTCCATCTTCTGCCAGCCGGCATCCTCGCTCCAGGCATGTATGTATTGAGGGGCAGGTCCTaGGGCTCTGCAGCAGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LSAVHLLPAGILAPGMYVLRGRS*GSAAAN Trigger: GTTTGCTGCTGCAGAGCCCCAGGACCTGCCCCTCAA...TACATACATGCCTGGAGCGAGGATGCCGGCTGGCAGAAGATGGACAGCTGAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | AACACTCAAGTACTTTCTCTCAGCTGTCCATCTTCTGCCAGCCGGCATCCTCGCGCATTTCCTGGTGGCTaGGCGCTCTGGGCGGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: NTQVLSLSCPSSASRHPRAFPGG*ALWAAM Trigger: CATCGCCGCCCAGAGCGCCCAGCCACCAGGAAATGC...GCGAGGATGCCGGCTGGCAGAAGATGGACAGCTGAGAGAAAGTACTTGAGTGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCAGCTGTCCATCTTCTGCCAGCCGGCATCCTCGCTCCAGGCATGTATGTAAAAGTGGGCATTTCCTaGTGGCTGGGCGCTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSAVHLLPAGILAPGMYVKVGIS*WLGALG Trigger: GCCCAGAGCGCCCAGCCACCAGGAAATGCCCACTTT...TACATACATGCCTGGAGCGAGGATGCCGGCTGGCAGAAGATGGACAGCTGAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR TCA 90 bp | GCCGGCATCCTCGCTCCAGGCATGTATGTAGGTTTTCTGGGAGCAGAGCCAGTCAGTGTTCAGGTGAGGTaGGGGTGGCTTCCTCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: AGILAPGMYVGFLGAEPVSVQVR*GWLPLT Trigger: TGTGAGAGGAAGCCACCCTCACCTCACCTGAACACT...GACTGGCTCTGCTCCCAGAAAACCTACATACATGCCTGGAGCGAGGATGCCGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR GCA 90 bp | ACTCCTGAGCCCTCTACTTCTATCCCACCCAGGGCATGCCAAGAGATGTCAGCTCCAGGTAGGATCGCTTaGAGGGCAAGTCCAGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TPEPSTSIPPRACQEMSAPGRIA*RASPGG Trigger: GCCACCTGGACTTGCCCTGCAAGCGATCCTACCTGG...AGCTGACATCTCTTGGCATGCCCTGGGTGGGATAGAAGTAGAGGGCTCAGGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | AACACTCAAGTACTTTCTCTCAGCTGTCCATCTTCTGCCAGCCGGCATCCTCGCTCCAGTGAGCCCCGGTaGCAGGAGAATCCGGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NTQVLSLSCPSSASRHPRSSEPR*QENPGA Trigger: TGCACCCGGATTCTCCTGCCACCGGGGCTCACTGGA...GCGAGGATGCCGGCTGGCAGAAGATGGACAGCTGAGAGAAAGTACTTGAGTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR TCA 90 bp | ACTCCTGAGCCCTCTACTTCTATCCCACCCAGGGCATGCCAAGAGATGTCAGCTTTGGCAGTGTTCAGGTaGGGTGAGGGTGGCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TPEPSTSIPPRACQEMSALAVFR*GEGGFL Trigger: GAGGAAGCCACCCTCACCTCACCTGAACACTGCCAA...AGCTGACATCTCTTGGCATGCCCTGGGTGGGATAGAAGTAGAGGGCTCAGGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR TCA 90 bp | GCCGGCATCCTCGCTCCAGGCATGTATGTAGGTTTTCTGGGAGCAGAGCCAGTCCAAGGAGAAGCTCTGTaGGTAGAGGAACTCGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: AGILAPGMYVGFLGAEPVQGEAL*VEELVG Trigger: GCCAACGAGTTCCTCTACTCACAGAGCTTCTCCTTG...GACTGGCTCTGCTCCCAGAAAACCTACATACATGCCTGGAGCGAGGATGCCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR GCA 90 bp | GCCGGCATCCTCGCTCCAGGCATGTATGTAGGTTTTCTGGGAGCAGAGCCAGTCTCTGCAGCAGCAAACTaGATGTGGGCCCCATTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: AGILAPGMYVGFLGAEPVSAAAN*MWAPFS Trigger: TGAGAATGGGGCCCACATGCAGTTTGCTGCTGCAGA...GACTGGCTCTGCTCCCAGAAAACCTACATACATGCCTGGAGCGAGGATGCCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | ACTCCTGAGCCCTCTACTTCTATCCCACCCAGGGCATGCCAAGAGATGTCAGCTTCCGTGCCTGCCTCGTaGAACTTCTTCCACAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TPEPSTSIPPRACQEMSASVPAS*NFFHSS Trigger: GGAGCTGTGGAAGAAGTTCCACGAGGCAGGCACGGA...AGCTGACATCTCTTGGCATGCCCTGGGTGGGATAGAAGTAGAGGGCTCAGGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000096.12 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGGCATGCCAAGAGATGTCAGCTAATGGTGGACTCGGCTCCTGTAGCCAAAAAAGTCTTCCTGGCATaGCCGGCTCAGCCTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PGHAKRCQLMVDSAPVAKKVFLA*PAQPSL Trigger: CAGGGAAGGCTGAGCCGGCCATGCCAGGAAGACTTT...TTTGGCTACAGGAGCCGAGTCCACCATTAGCTGACATCTCTTGGCATGCCCTGG 57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGCTTGAACACTCAAGTACTTTCTCTCAGCTGTCCATCTTCTGCCAGCCGGTCCAGTGAGCCCCGGTaGCAGGAGAATCCGGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSLNTQVLSLSCPSSASRSSEPR*QENPGA Trigger: TGCACCCGGATTCTCCTGCCACCGGGGCTCACTGGA...CCGGCTGGCAGAAGATGGACAGCTGAGAGAAAGTACTTGAGTGTTCAAGCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGGCATGCCAAGAGATGTCAGCTAATGGTGGACTCGGCTCCTGTAGCCAAACAGGGGGCTGACATCTaGCTTAGCCGAGAGTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PGHAKRCQLMVDSAPVAKQGADI*LSRELA Trigger: AGCCAACTCTCGGCTAAGCCAGATGTCAGCCCCCTG...TTTGGCTACAGGAGCCGAGTCCACCATTAGCTGACATCTCTTGGCATGCCCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | CCTCCCTACTCTGAAGGGATGATATGCTCCTCTGAGCTTGAACACTCAAGTACTGTGGGCATTTCCTGGTaGCTGGGCGCTCTGGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: PPYSEGMICSSELEHSSTVGISW*LGALGG Trigger: GCCGCCCAGAGCGCCCAGCCACCAGGAAATGCCCAC...AGTACTTGAGTGTTCAAGCTCAGAGGAGCATATCATCCCTTCAGAGTAGGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR TCA 90 bp | CCAGGGCATGCCAAGAGATGTCAGCTAATGGTGGACTCGGCTCCTGTAGCCAAACATGCAGCCCCACCTTaGTGTTCTCGATGGTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PGHAKRCQLMVDSAPVAKHAAPP*CSRWSA Trigger: AGCAGACCATCGAGAACATCAAGGTGGGGCTGCATG...TTTGGCTACAGGAGCCGAGTCCACCATTAGCTGACATCTCTTGGCATGCCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000096.12 ENSMUST00000108047.8 |
||
| CDS-3UTR TCA 90 bp | GCCGGCATCCTCGCTCCAGGCATGTATGTAGGTTTTCTGGGAGCAGAGCCAGTCCGGGGACGATGTCGATaGGAAGTATGTACTTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: AGILAPGMYVGFLGAEPVRGRCR*EVCTWS Trigger: AGACCAAGTACATACTTCTCATCGACATCGTCCCCG...GACTGGCTCTGCTCCCAGAAAACCTACATACATGCCTGGAGCGAGGATGCCGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR TCA 90 bp | CCAGGGCATGCCAAGAGATGTCAGCTAATGGTGGACTCGGCTCCTGTAGCCAAACGAGCCTCTGCCTCATaGTGCTTTTGGAGATCACGG | + |
|
Preference number: 4 (lower is better) Translates to: PGHAKRCQLMVDSAPVAKRASAS*CFWRSR Trigger: CCGTGATCTCCAAAAGCATCATGAGGCAGAGGCTCG...TTTGGCTACAGGAGCCGAGTCCACCATTAGCTGACATCTCTTGGCATGCCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR TCA 90 bp | ACTCCTGAGCCCTCTACTTCTATCCCACCCAGGGCATGCCAAGAGATGTCAGCTCGAGCCTCTGCCTCATaGTGCTTTTGGAGATCACGG | + |
|
Preference number: 4 (lower is better) Translates to: TPEPSTSIPPRACQEMSARASAS*CFWRSR Trigger: CCGTGATCTCCAAAAGCATCATGAGGCAGAGGCTCG...AGCTGACATCTCTTGGCATGCCCTGGGTGGGATAGAAGTAGAGGGCTCAGGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR GCA 90 bp | CTCTCAGCTGTCCATCTTCTGCCAGCCGGCATCCTCGCTCCAGGCATGTATGTATCTGCAGCAGCAAACTaGATGTGGGCCCCATTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSAVHLLPAGILAPGMYVSAAAN*MWAPFS Trigger: TGAGAATGGGGCCCACATGCAGTTTGCTGCTGCAGA...TACATACATGCCTGGAGCGAGGATGCCGGCTGGCAGAAGATGGACAGCTGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGCATGTATGTAGGTTTTCTGGGAGCAGAGCCAGTCCAGCGGATATGTGACCAGGTCCTGGGGCTCTaGAGCAGCAAACTGCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: PGMYVGFLGAEPVQRICDQVLGL*SSKLHV Trigger: CACATGCAGTTTGCTGCTGCAGAGCCCCAGGACCTG...GTCACATATCCGCTGGACTGGCTCTGCTCCCAGAAAACCTACATACATGCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | GTATCAACACAATCTCCAGAAGCTAAGGGAAGGGGGTGCTTCTGTTCCCCAAAGTCCAGTGAGCCCCGGTaGCAGGAGAATCCGGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VSTQSPEAKGRGCFCSPKSSEPR*QENPGA Trigger: TGCACCCGGATTCTCCTGCCACCGGGGCTCACTGGA...CTTTGGGGAACAGAAGCACCCCCTTCCCTTAGCTTCTGGAGATTGTGTTGATAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | AACACTCAAGTACTTTCTCTCAGCTGTCCATCTTCTGCCAGCCGGCATCCTCGCGGAGTCCCTCTGAGTTaGGAAGGTGTTGAGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NTQVLSLSCPSSASRHPRGVPLS*EGVEGQ Trigger: CTGCCCCTCAACACCTTCCCAACTCAGAGGGACTCC...GCGAGGATGCCGGCTGGCAGAAGATGGACAGCTGAGAGAAAGTACTTGAGTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | GCCGGCATCCTCGCTCCAGGCATGTATGTAGGTTTTCTGGGAGCAGAGCCAGTCACATACAGGCTTCTCTaGGGGTCACCTCACTGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: AGILAPGMYVGFLGAEPVTYRLL*GSPHCN Trigger: ATTGCAGTGAGGTGACCCCCAGAGAAGCCTGTATGT...GACTGGCTCTGCTCCCAGAAAACCTACATACATGCCTGGAGCGAGGATGCCGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGCTTGAACACTCAAGTACTTTCTCTCAGCTGTCCATCTTCTGCCAGCCGGCATGTTACAGCTCAGTaGGGGTGGGGGCAGGTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSLNTQVLSLSCPSSASRHVTAQ*GWGQVV Trigger: GACGACCTGCCCCCACCCCCACTGAGCTGTAACATG...CCGGCTGGCAGAAGATGGACAGCTGAGAGAAAGTACTTGAGTGTTCAAGCTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCAGCTGTCCATCTTCTGCCAGCCGGCATCCTCGCTCCAGGCATGTATGTAAAGGCACAGTCTCCATaGTCTGAACGCTGTAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSAVHLLPAGILAPGMYVKAQSP*SERCSW Trigger: CCAGCTACAGCGTTCAGACCATGGAGACTGTGCCTT...TACATACATGCCTGGAGCGAGGATGCCGGCTGGCAGAAGATGGACAGCTGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | GGGATGATATGCTCCTCTGAGCTTGAACACTCAAGTACTTTCTCTCAGCTGTCCGCATTTCCTGGTGGCTaGGCGCTCTGGGCGGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: GMICSSELEHSSTFSQLSAFPGG*ALWAAM Trigger: CATCGCCGCCCAGAGCGCCCAGCCACCAGGAAATGC...GGACAGCTGAGAGAAAGTACTTGAGTGTTCAAGCTCAGAGGAGCATATCATCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | CACACACACACACACATTCTGAAATACCTTTCCATGTTTCTTGGCAGTGCTGGCGTGGGCATTTCCTGGTaGCTGGGCGCTCTGGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHILKYLSMFLGSAGVGISW*LGALGG Trigger: GCCGCCCAGAGCGCCCAGCCACCAGGAAATGCCCAC...GCCAGCACTGCCAAGAAACATGGAAAGGTATTTCAGAATGTGTGTGTGTGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR TCA 90 bp | CTCTCAGCTGTCCATCTTCTGCCAGCCGGCATCCTCGCTCCAGGCATGTATGTACGGGGACGATGTCGATaGGAAGTATGTACTTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSAVHLLPAGILAPGMYVRGRCR*EVCTWS Trigger: AGACCAAGTACATACTTCTCATCGACATCGTCCCCG...TACATACATGCCTGGAGCGAGGATGCCGGCTGGCAGAAGATGGACAGCTGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR TCA 90 bp | ACTCCTGAGCCCTCTACTTCTATCCCACCCAGGGCATGCCAAGAGATGTCAGCTCAAGGAGAAGCTCTGTaGGTAGAGGAACTCGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TPEPSTSIPPRACQEMSAQGEAL*VEELVG Trigger: GCCAACGAGTTCCTCTACTCACAGAGCTTCTCCTTG...AGCTGACATCTCTTGGCATGCCCTGGGTGGGATAGAAGTAGAGGGCTCAGGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR GCA 90 bp | CTCTCAGCTGTCCATCTTCTGCCAGCCGGCATCCTCGCTCCAGGCATGTATGTACTGGGAACACGTGGGTaGAAAAGGCTGTGTTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSAVHLLPAGILAPGMYVLGTRG*KRLCFW Trigger: CCAAAAACACAGCCTTTTGCACCCACGTGTTCCCAG...TACATACATGCCTGGAGCGAGGATGCCGGCTGGCAGAAGATGGACAGCTGAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | ACTCCTGAGCCCTCTACTTCTATCCCACCCAGGGCATGCCAAGAGATGTCAGCTGAGTTGAGGATGATATaGCCAAAGGGGTCCAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TPEPSTSIPPRACQEMSAELRMI*PKGSRW Trigger: CCACCTGGACCCCTTTGGCCATATCATCCTCAACTC...AGCTGACATCTCTTGGCATGCCCTGGGTGGGATAGAAGTAGAGGGCTCAGGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCAGCTGTCCATCTTCTGCCAGCCGGCATCCTCGCTCCAGGCATGTATGTAGATGAAGGAGGTCTCTaGGAACACGTGGGTGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSAVHLLPAGILAPGMYVDEGGL*EHVGAK Trigger: TTTTGCACCCACGTGTTCCCAGAGACCTCCTTCATC...TACATACATGCCTGGAGCGAGGATGCCGGCTGGCAGAAGATGGACAGCTGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGCTTGAACACTCAAGTACTTTCTCTCAGCTGTCCATCTTCTGCCAGCCGGCAGGGGGCTGACATCTaGCTTAGCCGAGAGTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSLNTQVLSLSCPSSASRQGADI*LSRELA Trigger: AGCCAACTCTCGGCTAAGCCAGATGTCAGCCCCCTG...CCGGCTGGCAGAAGATGGACAGCTGAGAGAAAGTACTTGAGTGTTCAAGCTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | GTATCAACACAATCTCCAGAAGCTAAGGGAAGGGGGTGCTTCTGTTCCCCAAAGCATGTTACAGCTCAGTaGGGGTGGGGGCAGGTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: VSTQSPEAKGRGCFCSPKHVTAQ*GWGQVV Trigger: GACGACCTGCCCCCACCCCCACTGAGCTGTAACATG...CTTTGGGGAACAGAAGCACCCCCTTCCCTTAGCTTCTGGAGATTGTGTTGATAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGCATGTATGTAGGTTTTCTGGGAGCAGAGCCAGTCCAGCGGATATGTGACGCTGTAGCTGGTGTATaGCGACACCGACGTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: PGMYVGFLGAEPVQRICDAVAGV*RHRRPH Trigger: ATGTGGACGTCGGTGTCGCCATACACCAGCTACAGC...GTCACATATCCGCTGGACTGGCTCTGCTCCCAGAAAACCTACATACATGCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | CACACACACACACACATTCTGAAATACCTTTCCATGTTTCTTGGCAGTGCTGGCGCATTTCCTGGTGGCTaGGCGCTCTGGGCGGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHILKYLSMFLGSAGAFPGG*ALWAAM Trigger: CATCGCCGCCCAGAGCGCCCAGCCACCAGGAAATGC...GCCAGCACTGCCAAGAAACATGGAAAGGTATTTCAGAATGTGTGTGTGTGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | GTATCAACACAATCTCCAGAAGCTAAGGGAAGGGGGTGCTTCTGTTCCCCAAAGAAAGTGGGCATTTCCTaGTGGCTGGGCGCTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VSTQSPEAKGRGCFCSPKKVGIS*WLGALG Trigger: GCCCAGAGCGCCCAGCCACCAGGAAATGCCCACTTT...CTTTGGGGAACAGAAGCACCCCCTTCCCTTAGCTTCTGGAGATTGTGTTGATAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR TCA 90 bp | ACTCCTGAGCCCTCTACTTCTATCCCACCCAGGGCATGCCAAGAGATGTCAGCTTGGGGTTCATGCCTGTaGCTTTTACCTTGTAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TPEPSTSIPPRACQEMSAWGSCL*LLPCSW Trigger: CCAGCTACAAGGTAAAAGTCACAGGCATGAACCCCA...AGCTGACATCTCTTGGCATGCCCTGGGTGGGATAGAAGTAGAGGGCTCAGGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR TCA 90 bp | GTATCAACACAATCTCCAGAAGCTAAGGGAAGGGGGTGCTTCTGTTCCCCAAAGTTGGCAGTGTTCAGGTaGGGTGAGGGTGGCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VSTQSPEAKGRGCFCSPKLAVFR*GEGGFL Trigger: GAGGAAGCCACCCTCACCTCACCTGAACACTGCCAA...CTTTGGGGAACAGAAGCACCCCCTTCCCTTAGCTTCTGGAGATTGTGTTGATAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR TCA 90 bp | ACTCCTGAGCCCTCTACTTCTATCCCACCCAGGGCATGCCAAGAGATGTCAGCTGTCCCCATCCCTGAATaGTACTGTAAGGATGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: TPEPSTSIPPRACQEMSAVPIPE*YCKDDS Trigger: GGAGTCATCCTTACAGTATCATTCAGGGATGGGGAC...AGCTGACATCTCTTGGCATGCCCTGGGTGGGATAGAAGTAGAGGGCTCAGGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR TCA 90 bp | CCAGGGCATGCCAAGAGATGTCAGCTAATGGTGGACTCGGCTCCTGTAGCCAAAGTCCCCATCCCTGAATaGTACTGTAAGGATGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: PGHAKRCQLMVDSAPVAKVPIPE*YCKDDS Trigger: GGAGTCATCCTTACAGTATCATTCAGGGATGGGGAC...TTTGGCTACAGGAGCCGAGTCCACCATTAGCTGACATCTCTTGGCATGCCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR GCA 90 bp | AACACTCAAGTACTTTCTCTCAGCTGTCCATCTTCTGCCAGCCGGCATCCTCGCCACAGCTCCTTCTCATaGAGCCCCACCTTGATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: NTQVLSLSCPSSASRHPRHSSFS*SPTLMF Trigger: GAACATCAAGGTGGGGCTGCATGAGAAGGAGCTGTG...GCGAGGATGCCGGCTGGCAGAAGATGGACAGCTGAGAGAAAGTACTTGAGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000096.12 ENSMUST00000108047.8 |
||
| CDS-3UTR GCA 90 bp | ACTCCTGAGCCCTCTACTTCTATCCCACCCAGGGCATGCCAAGAGATGTCAGCTCTGGAAACGAGCCTCTaGCTCATGATGCTTTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TPEPSTSIPPRACQEMSALETSL*LMMLLE Trigger: CTCCAAAAGCATCATGAGGCAGAGGCTCGTTTCCAG...AGCTGACATCTCTTGGCATGCCCTGGGTGGGATAGAAGTAGAGGGCTCAGGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR GCA 90 bp | AACACTCAAGTACTTTCTCTCAGCTGTCCATCTTCTGCCAGCCGGCATCCTCGCTCTGCAGCAGCAAACTaGATGTGGGCCCCATTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NTQVLSLSCPSSASRHPRSAAAN*MWAPFS Trigger: TGAGAATGGGGCCCACATGCAGTTTGCTGCTGCAGA...GCGAGGATGCCGGCTGGCAGAAGATGGACAGCTGAGAGAAAGTACTTGAGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | GTATCAACACAATCTCCAGAAGCTAAGGGAAGGGGGTGCTTCTGTTCCCCAAAGAAAGTCTTCCTGGCATaGCCGGCTCAGCCTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VSTQSPEAKGRGCFCSPKKVFLA*PAQPSL Trigger: CAGGGAAGGCTGAGCCGGCCATGCCAGGAAGACTTT...CTTTGGGGAACAGAAGCACCCCCTTCCCTTAGCTTCTGGAGATTGTGTTGATAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | AACACTCAAGTACTTTCTCTCAGCTGTCCATCTTCTGCCAGCCGGCATCCTCGCGAGTTGAGGATGATATaGCCAAAGGGGTCCAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NTQVLSLSCPSSASRHPRELRMI*PKGSRW Trigger: CCACCTGGACCCCTTTGGCCATATCATCCTCAACTC...GCGAGGATGCCGGCTGGCAGAAGATGGACAGCTGAGAGAAAGTACTTGAGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | GTATCAACACAATCTCCAGAAGCTAAGGGAAGGGGGTGCTTCTGTTCCCCAAAGGGAGTCCCTCTGAGTTaGGAAGGTGTTGAGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VSTQSPEAKGRGCFCSPKGVPLS*EGVEGQ Trigger: CTGCCCCTCAACACCTTCCCAACTCAGAGGGACTCC...CTTTGGGGAACAGAAGCACCCCCTTCCCTTAGCTTCTGGAGATTGTGTTGATAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGCATGTATGTAGGTTTTCTGGGAGCAGAGCCAGTCCAGCGGATATGTGACAGTGGTAGAAGAGGCTaGAGTCCCTCTGAGTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PGMYVGFLGAEPVQRICDSGRRG*SPSELG Trigger: TCCCAACTCAGAGGGACTCCAGCCTCTTCTACCACT...GTCACATATCCGCTGGACTGGCTCTGCTCCCAGAAAACCTACATACATGCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGCTTGAACACTCAAGTACTTTCTCTCAGCTGTCCATCTTCTGCCAGCCGGGCTGTAGCTGGTGTATaGCGACACCGACGTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: LSLNTQVLSLSCPSSASRAVAGV*RHRRPH Trigger: ATGTGGACGTCGGTGTCGCCATACACCAGCTACAGC...CCGGCTGGCAGAAGATGGACAGCTGAGAGAAAGTACTTGAGTGTTCAAGCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR TCA 90 bp | GTATCAACACAATCTCCAGAAGCTAAGGGAAGGGGGTGCTTCTGTTCCCCAAAGAGTGTTCAGGTGAGGTaGGGGTGGCTTCCTCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: VSTQSPEAKGRGCFCSPKSVQVR*GWLPLT Trigger: TGTGAGAGGAAGCCACCCTCACCTCACCTGAACACT...CTTTGGGGAACAGAAGCACCCCCTTCCCTTAGCTTCTGGAGATTGTGTTGATAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGCTTGAACACTCAAGTACTTTCTCTCAGCTGTCCATCTTCTGCCAGCCGGCAAGGAGAAGCTCTGTaGGTAGAGGAACTCGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSLNTQVLSLSCPSSASRQGEAL*VEELVG Trigger: GCCAACGAGTTCCTCTACTCACAGAGCTTCTCCTTG...CCGGCTGGCAGAAGATGGACAGCTGAGAGAAAGTACTTGAGTGTTCAAGCTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR GCA 90 bp | GGGATGATATGCTCCTCTGAGCTTGAACACTCAAGTACTTTCTCTCAGCTGTCCGGTCACTGTCATCGCTaGCCCGGAATCCCTTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GMICSSELEHSSTFSQLSGHCHR*PGIPWQ Trigger: TTGCCAAGGGATTCCGGGGCAGCGATGACAGTGACC...GGACAGCTGAGAGAAAGTACTTGAGTGTTCAAGCTCAGAGGAGCATATCATCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR GCA 90 bp | CCTCCCTACTCTGAAGGGATGATATGCTCCTCTGAGCTTGAACACTCAAGTACTCAGGTCCTGGGGCTCTaGAGCAGCAAACTGCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: PPYSEGMICSSELEHSSTQVLGL*SSKLHV Trigger: CACATGCAGTTTGCTGCTGCAGAGCCCCAGGACCTG...AGTACTTGAGTGTTCAAGCTCAGAGGAGCATATCATCCCTTCAGAGTAGGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | GGGATGATATGCTCCTCTGAGCTTGAACACTCAAGTACTTTCTCTCAGCTGTCCTCCGTGCCTGCCTCGTaGAACTTCTTCCACAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GMICSSELEHSSTFSQLSSVPAS*NFFHSS Trigger: GGAGCTGTGGAAGAAGTTCCACGAGGCAGGCACGGA...GGACAGCTGAGAGAAAGTACTTGAGTGTTCAAGCTCAGAGGAGCATATCATCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000096.12 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | CCTCCCTACTCTGAAGGGATGATATGCTCCTCTGAGCTTGAACACTCAAGTACTAAAGTCTTCCTGGCATaGCCGGCTCAGCCTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PPYSEGMICSSELEHSSTKVFLA*PAQPSL Trigger: CAGGGAAGGCTGAGCCGGCCATGCCAGGAAGACTTT...AGTACTTGAGTGTTCAAGCTCAGAGGAGCATATCATCCCTTCAGAGTAGGGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | CCTCCCTACTCTGAAGGGATGATATGCTCCTCTGAGCTTGAACACTCAAGTACTCAGGGGGCTGACATCTaGCTTAGCCGAGAGTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PPYSEGMICSSELEHSSTQGADI*LSRELA Trigger: AGCCAACTCTCGGCTAAGCCAGATGTCAGCCCCCTG...AGTACTTGAGTGTTCAAGCTCAGAGGAGCATATCATCCCTTCAGAGTAGGGAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | CACACACACACACACATTCTGAAATACCTTTCCATGTTTCTTGGCAGTGCTGGCTTGAGGGGCAGGTCCTaGGGCTCTGCAGCAGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHILKYLSMFLGSAGLRGRS*GSAAAN Trigger: GTTTGCTGCTGCAGAGCCCCAGGACCTGCCCCTCAA...GCCAGCACTGCCAAGAAACATGGAAAGGTATTTCAGAATGTGTGTGTGTGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | AACACTCAAGTACTTTCTCTCAGCTGTCCATCTTCTGCCAGCCGGCATCCTCGCACATACAGGCTTCTCTaGGGGTCACCTCACTGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: NTQVLSLSCPSSASRHPRTYRLL*GSPHCN Trigger: ATTGCAGTGAGGTGACCCCCAGAGAAGCCTGTATGT...GCGAGGATGCCGGCTGGCAGAAGATGGACAGCTGAGAGAAAGTACTTGAGTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGCATGTATGTAGGTTTTCTGGGAGCAGAGCCAGTCCAGCGGATATGTGACACATACAGGCTTCTCTaGGGGTCACCTCACTGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: PGMYVGFLGAEPVQRICDTYRLL*GSPHCN Trigger: ATTGCAGTGAGGTGACCCCCAGAGAAGCCTGTATGT...GTCACATATCCGCTGGACTGGCTCTGCTCCCAGAAAACCTACATACATGCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | CACACACACACACACATTCTGAAATACCTTTCCATGTTTCTTGGCAGTGCTGGCAAAGTGGGCATTTCCTaGTGGCTGGGCGCTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHILKYLSMFLGSAGKVGIS*WLGALG Trigger: GCCCAGAGCGCCCAGCCACCAGGAAATGCCCACTTT...GCCAGCACTGCCAAGAAACATGGAAAGGTATTTCAGAATGTGTGTGTGTGTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGGCATGCCAAGAGATGTCAGCTAATGGTGGACTCGGCTCCTGTAGCCAAATTGTACACACTAAAGTaGGCATTTCCTGGTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGHAKRCQLMVDSAPVAKLYTLK*AFPGGW Trigger: CCAGCCACCAGGAAATGCCCACTTTAGTGTGTACAA...TTTGGCTACAGGAGCCGAGTCCACCATTAGCTGACATCTCTTGGCATGCCCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR TCA 90 bp | GGGATGATATGCTCCTCTGAGCTTGAACACTCAAGTACTTTCTCTCAGCTGTCCCATGCAGCCCCACCTTaGTGTTCTCGATGGTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GMICSSELEHSSTFSQLSHAAPP*CSRWSA Trigger: AGCAGACCATCGAGAACATCAAGGTGGGGCTGCATG...GGACAGCTGAGAGAAAGTACTTGAGTGTTCAAGCTCAGAGGAGCATATCATCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000096.12 ENSMUST00000108047.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGCTTGAACACTCAAGTACTTTCTCTCAGCTGTCCATCTTCTGCCAGCCGGCGGGGACGATGTCGATaGGAAGTATGTACTTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSLNTQVLSLSCPSSASRRGRCR*EVCTWS Trigger: AGACCAAGTACATACTTCTCATCGACATCGTCCCCG...CCGGCTGGCAGAAGATGGACAGCTGAGAGAAAGTACTTGAGTGTTCAAGCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR TCA 90 bp | GGGATGATATGCTCCTCTGAGCTTGAACACTCAAGTACTTTCTCTCAGCTGTCCCGAGCCTCTGCCTCATaGTGCTTTTGGAGATCACGG | + |
|
Preference number: 4 (lower is better) Translates to: GMICSSELEHSSTFSQLSRASAS*CFWRSR Trigger: CCGTGATCTCCAAAAGCATCATGAGGCAGAGGCTCG...GGACAGCTGAGAGAAAGTACTTGAGTGTTCAAGCTCAGAGGAGCATATCATCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR GCA 90 bp | GTATCAACACAATCTCCAGAAGCTAAGGGAAGGGGGTGCTTCTGTTCCCCAAAGCACAGCTCCTTCTCATaGAGCCCCACCTTGATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSTQSPEAKGRGCFCSPKHSSFS*SPTLMF Trigger: GAACATCAAGGTGGGGCTGCATGAGAAGGAGCTGTG...CTTTGGGGAACAGAAGCACCCCCTTCCCTTAGCTTCTGGAGATTGTGTTGATAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000000096.12 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | CACACACACACACACATTCTGAAATACCTTTCCATGTTTCTTGGCAGTGCTGGCGGAGTCCCTCTGAGTTaGGAAGGTGTTGAGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHILKYLSMFLGSAGGVPLS*EGVEGQ Trigger: CTGCCCCTCAACACCTTCCCAACTCAGAGGGACTCC...GCCAGCACTGCCAAGAAACATGGAAAGGTATTTCAGAATGTGTGTGTGTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | CCTCCCTACTCTGAAGGGATGATATGCTCCTCTGAGCTTGAACACTCAAGTACTGCTGTAGCTGGTGTATaGCGACACCGACGTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: PPYSEGMICSSELEHSSTAVAGV*RHRRPH Trigger: ATGTGGACGTCGGTGTCGCCATACACCAGCTACAGC...AGTACTTGAGTGTTCAAGCTCAGAGGAGCATATCATCCCTTCAGAGTAGGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | GTATCAACACAATCTCCAGAAGCTAAGGGAAGGGGGTGCTTCTGTTCCCCAAAGAAGGCACAGTCTCCATaGTCTGAACGCTGTAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VSTQSPEAKGRGCFCSPKKAQSP*SERCSW Trigger: CCAGCTACAGCGTTCAGACCATGGAGACTGTGCCTT...CTTTGGGGAACAGAAGCACCCCCTTCCCTTAGCTTCTGGAGATTGTGTTGATAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGCATGTATGTAGGTTTTCTGGGAGCAGAGCCAGTCCAGCGGATATGTGACTTGTACACACTAAAGTaGGCATTTCCTGGTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGMYVGFLGAEPVQRICDLYTLK*AFPGGW Trigger: CCAGCCACCAGGAAATGCCCACTTTAGTGTGTACAA...GTCACATATCCGCTGGACTGGCTCTGCTCCCAGAAAACCTACATACATGCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR GCA 90 bp | GTATCAACACAATCTCCAGAAGCTAAGGGAAGGGGGTGCTTCTGTTCCCCAAAGCTGGGAACACGTGGGTaGAAAAGGCTGTGTTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VSTQSPEAKGRGCFCSPKLGTRG*KRLCFW Trigger: CCAAAAACACAGCCTTTTGCACCCACGTGTTCCCAG...CTTTGGGGAACAGAAGCACCCCCTTCCCTTAGCTTCTGGAGATTGTGTTGATAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR GCA 90 bp | GTATCAACACAATCTCCAGAAGCTAAGGGAAGGGGGTGCTTCTGTTCCCCAAAGCTGGAAACGAGCCTCTaGCTCATGATGCTTTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VSTQSPEAKGRGCFCSPKLETSL*LMMLLE Trigger: CTCCAAAAGCATCATGAGGCAGAGGCTCGTTTCCAG...CTTTGGGGAACAGAAGCACCCCCTTCCCTTAGCTTCTGGAGATTGTGTTGATAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | GGGATGATATGCTCCTCTGAGCTTGAACACTCAAGTACTTTCTCTCAGCTGTCCCACATAAAGTCTTCCTaGCATGGCCGGCTCAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GMICSSELEHSSTFSQLSHIKSS*HGRLSL Trigger: AAGGCTGAGCCGGCCATGCCAGGAAGACTTTATGTG...GGACAGCTGAGAGAAAGTACTTGAGTGTTCAAGCTCAGAGGAGCATATCATCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | CCTCCCTACTCTGAAGGGATGATATGCTCCTCTGAGCTTGAACACTCAAGTACTAGTGGTAGAAGAGGCTaGAGTCCCTCTGAGTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PPYSEGMICSSELEHSSTSGRRG*SPSELG Trigger: TCCCAACTCAGAGGGACTCCAGCCTCTTCTACCACT...AGTACTTGAGTGTTCAAGCTCAGAGGAGCATATCATCCCTTCAGAGTAGGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | CCTCCCTACTCTGAAGGGATGATATGCTCCTCTGAGCTTGAACACTCAAGTACTAAGGCACAGTCTCCATaGTCTGAACGCTGTAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PPYSEGMICSSELEHSSTKAQSP*SERCSW Trigger: CCAGCTACAGCGTTCAGACCATGGAGACTGTGCCTT...AGTACTTGAGTGTTCAAGCTCAGAGGAGCATATCATCCCTTCAGAGTAGGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR TCA 90 bp | GGGATGATATGCTCCTCTGAGCTTGAACACTCAAGTACTTTCTCTCAGCTGTCCGTCCCCATCCCTGAATaGTACTGTAAGGATGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: GMICSSELEHSSTFSQLSVPIPE*YCKDDS Trigger: GGAGTCATCCTTACAGTATCATTCAGGGATGGGGAC...GGACAGCTGAGAGAAAGTACTTGAGTGTTCAAGCTCAGAGGAGCATATCATCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR GCA 90 bp | GGGATGATATGCTCCTCTGAGCTTGAACACTCAAGTACTTTCTCTCAGCTGTCCCTGGAAACGAGCCTCTaGCTCATGATGCTTTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GMICSSELEHSSTFSQLSLETSL*LMMLLE Trigger: CTCCAAAAGCATCATGAGGCAGAGGCTCGTTTCCAG...GGACAGCTGAGAGAAAGTACTTGAGTGTTCAAGCTCAGAGGAGCATATCATCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | CACACACACACACACATTCTGAAATACCTTTCCATGTTTCTTGGCAGTGCTGGCCACATAAAGTCTTCCTaGCATGGCCGGCTCAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHILKYLSMFLGSAGHIKSS*HGRLSL Trigger: AAGGCTGAGCCGGCCATGCCAGGAAGACTTTATGTG...GCCAGCACTGCCAAGAAACATGGAAAGGTATTTCAGAATGTGTGTGTGTGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | GGGATGATATGCTCCTCTGAGCTTGAACACTCAAGTACTTTCTCTCAGCTGTCCGATGAAGGAGGTCTCTaGGAACACGTGGGTGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GMICSSELEHSSTFSQLSDEGGL*EHVGAK Trigger: TTTTGCACCCACGTGTTCCCAGAGACCTCCTTCATC...GGACAGCTGAGAGAAAGTACTTGAGTGTTCAAGCTCAGAGGAGCATATCATCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | CCTCCCTACTCTGAAGGGATGATATGCTCCTCTGAGCTTGAACACTCAAGTACTGATGAAGGAGGTCTCTaGGAACACGTGGGTGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: PPYSEGMICSSELEHSSTDEGGL*EHVGAK Trigger: TTTTGCACCCACGTGTTCCCAGAGACCTCCTTCATC...AGTACTTGAGTGTTCAAGCTCAGAGGAGCATATCATCCCTTCAGAGTAGGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CCA 90 bp | GGGATGATATGCTCCTCTGAGCTTGAACACTCAAGTACTTTCTCTCAGCTGTCCTTGTACACACTAAAGTaGGCATTTCCTGGTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GMICSSELEHSSTFSQLSLYTLK*AFPGGW Trigger: CCAGCCACCAGGAAATGCCCACTTTAGTGTGTACAA...GGACAGCTGAGAGAAAGTACTTGAGTGTTCAAGCTCAGAGGAGCATATCATCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS GCA 90 bp | GGCGGCGGCGACGTCGGCGCCCTGGCCCGGTGGGCTGCTGAGCGCTaGTCCACTAAGGCCCGGCGTGGCCAGCGCGGGTTCGGGGGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: GGGDVGALARWAAER*STKARRGQRGFGGV Trigger: AACGCCCCCGAACCCGCGCTGGCCACGCCGGGCCTTAGTGGAGCAGCGCTCAGCAGCCCACCGGGCCAGGGCGCCGACGTCGCCGCCGCC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000096.12 ENSMUST00000108047.8 |
||
| CDS TCA 90 bp | CCTCGTGGAACTTCTTCCACAGCTCCTTCTCATGCAGCCCCACCTTaGTGTTCTCGATGGTCTGCTCCGCGGCGGCAGCGGCGGCGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: PRGTSSTAPSHAAPP*CSRWSAPRRQRRRR Trigger: CCGCCGCCGCCGCTGCCGCCGCGGAGCAGACCATCGAGAACATCAAGGTGGGGCTGCATGAGAAGGAGCTGTGGAAGAAGTTCCACGAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000096.12 ENSMUST00000108047.8 |
||
| CDS GCA 90 bp | AGTGATCGTCCCCCACTGAAGAGGGGGTTTCCAGGTAGGATCGCTTaGAGGGCAAGTCCAGGTGGCGGGCACTGTCTCTACGCTTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SDRPPLKRGFPGRIA*RASPGGGHCLYASG Trigger: GCCTGAAGCGTAGAGACAGTGCCCGCCACCTGGACTTGCCCTGCAAGCGATCCTACCTGGAAACCCCCTCTTCAGTGGGGGACGATCACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS CCA 90 bp | GTAGTGCTGCAGGGCCTGGTGTGCGCTGTGCAGGGGGCTGACATCTaGCTTAGCCGAGAGTTGGCTGGAAACGAGCCTCTGCCTCATGAT | + |
|
Preference number: 5 (lower is better) Translates to: VVLQGLVCAVQGADI*LSRELAGNEPLPHD Trigger: ATCATGAGGCAGAGGCTCGTTTCCAGCCAACTCTCGGCTAAGCCAGATGTCAGCCCCCTGCACAGCGCACACCAGGCCCTGCAGCACTAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS CCA 90 bp | CTGGTAAGGCACAGTCTCCATGGTCTGAACGCTGTAGCTGGTGTATaGCGACACCGACGTCCACATGTTACAGCTCAGTGGGGGTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LVRHSLHGLNAVAGV*RHRRPHVTAQWGWG Trigger: CCCCCACCCCCACTGAGCTGTAACATGTGGACGTCGGTGTCGCCATACACCAGCTACAGCGTTCAGACCATGGAGACTGTGCCTTACCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS CCA 90 bp | TGGTGTGCGCTGTGCAGGGGGCTGACATCTGGCTTAGCCGAGAGTTaGCTGGAAACGAGCCTCTGCCTCATGATGCTTTTGGAGATCACG | + |
|
Preference number: 5 (lower is better) Translates to: WCALCRGLTSGLAES*LETSLCLMMLLEIT Trigger: CGTGATCTCCAAAAGCATCATGAGGCAGAGGCTCGTTTCCAGCCAACTCTCGGCTAAGCCAGATGTCAGCCCCCTGCACAGCGCACACCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS CCA 90 bp | GGAAGGGCTGGTAAGGCACAGTCTCCATGGTCTGAACGCTGTAGCTaGTGTATGGCGACACCGACGTCCACATGTTACAGCTCAGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GRAGKAQSPWSERCS*CMATPTSTCYSSVG Trigger: CCCCACTGAGCTGTAACATGTGGACGTCGGTGTCGCCATACACCAGCTACAGCGTTCAGACCATGGAGACTGTGCCTTACCAGCCCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS GCA 90 bp | GGGCTGACATCTGGCTTAGCCGAGAGTTGGCTGGAAACGAGCCTCTaGCTCATGATGCTTTTGGAGATCACGGGATACTCCTTGCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GLTSGLAESWLETSL*LMMLLEITGYSLLC Trigger: GCAGAGCAAGGAGTATCCCGTGATCTCCAAAAGCATCATGAGGCAGAGGCTCGTTTCCAGCCAACTCTCGGCTAAGCCAGATGTCAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS CCA 90 bp | ATGACTCCCGGGTCAAGGAGAAGCTCTGTGAGTAGAGGAACTCGTTaGCAGTGTTCAGGTGAGGTGAGGGTGGCTTCCTCTCACACATCC | + |
|
Preference number: 5 (lower is better) Translates to: MTPGSRRSSVSRGTR*QCSGEVRVASSHTS Trigger: GGATGTGTGAGAGGAAGCCACCCTCACCTCACCTGAACACTGCCAACGAGTTCCTCTACTCACAGAGCTTCTCCTTGACCCGGGAGTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CAA 90 bp | GGGATGATATGCTCCTCTGAGCTTGAACACTCAAGTACTTTCTCTCAGCTGTCCGCGGGTTCGGGGGCGTaGGTGGTGCTAGTGTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GMICSSELEHSSTFSQLSAGSGA*VVLVLL Trigger: CAGCAACACTAGCACCACCAACGCCCCCGAACCCGC...GGACAGCTGAGAGAAAGTACTTGAGTGTTCAAGCTCAGAGGAGCATATCATCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000096.12 ENSMUST00000108047.8 |
||
| CDS-3UTR CAA 90 bp | CACACACACACACACATTCTGAAATACCTTTCCATGTTTCTTGGCAGTGCTGGCGCGGGTTCGGGGGCGTaGGTGGTGCTAGTGTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HTHTHILKYLSMFLGSAGAGSGA*VVLVLL Trigger: CAGCAACACTAGCACCACCAACGCCCCCGAACCCGC...GCCAGCACTGCCAAGAAACATGGAAAGGTATTTCAGAATGTGTGTGTGTGTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000096.12 ENSMUST00000108047.8 |
||
| CDS-3UTR CAA 90 bp | GTATCAACACAATCTCCAGAAGCTAAGGGAAGGGGGTGCTTCTGTTCCCCAAAGTCATGCAGCCCCACCTaGATGTTCTCGATGGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VSTQSPEAKGRGCFCSPKSCSPT*MFSMVC Trigger: GCAGACCATCGAGAACATCAAGGTGGGGCTGCATGA...CTTTGGGGAACAGAAGCACCCCCTTCCCTTAGCTTCTGGAGATTGTGTTGATAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000000096.12 ENSMUST00000108047.8 |
||
| CDS-3UTR CAA 90 bp | GGGATGATATGCTCCTCTGAGCTTGAACACTCAAGTACTTTCTCTCAGCTGTCCTCATGCAGCCCCACCTaGATGTTCTCGATGGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GMICSSELEHSSTFSQLSSCSPT*MFSMVC Trigger: GCAGACCATCGAGAACATCAAGGTGGGGCTGCATGA...GGACAGCTGAGAGAAAGTACTTGAGTGTTCAAGCTCAGAGGAGCATATCATCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000096.12 ENSMUST00000108047.8 |
||
| CDS-3UTR CAA 90 bp | CTGAGCTTGAACACTCAAGTACTTTCTCTCAGCTGTCCATCTTCTGCCAGCCGGATGAGAAGTATGTACTaGGTCTTGGGGTTCATGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LSLNTQVLSLSCPSSASRMRSMY*VLGFMP Trigger: AGGCATGAACCCCAAGACCAAGTACATACTTCTCAT...CCGGCTGGCAGAAGATGGACAGCTGAGAGAAAGTACTTGAGTGTTCAAGCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGCATGTATGTAGGTTTTCTGGGAGCAGAGCCAGTCCAGCGGATATGTGACTACTTATGCATGGAGTaGAGGATGATATGGCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: PGMYVGFLGAEPVQRICDYLCME*RMIWPK Trigger: CTTTGGCCATATCATCCTCAACTCCATGCATAAGTA...GTCACATATCCGCTGGACTGGCTCTGCTCCCAGAAAACCTACATACATGCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CAA 90 bp | CACACACACACACACATTCTGAAATACCTTTCCATGTTTCTTGGCAGTGCTGGCAGTATGTACTTGGTCTaGGGGTTCATGCCTGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: HTHTHILKYLSMFLGSAGSMYLV*GFMPVT Trigger: AGTCACAGGCATGAACCCCAAGACCAAGTACATACT...GCCAGCACTGCCAAGAAACATGGAAAGGTATTTCAGAATGTGTGTGTGTGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
||
| CDS-3UTR CAA 90 bp | CACACACACACACACATTCTGAAATACCTTTCCATGTTTCTTGGCAGTGCTGGCATGAGAAGTATGTACTaGGTCTTGGGGTTCATGCCT | + |
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Preference number: 5 (lower is better) Translates to: HTHTHILKYLSMFLGSAGMRSMY*VLGFMP Trigger: AGGCATGAACCCCAAGACCAAGTACATACTTCTCAT...GCCAGCACTGCCAAGAAACATGGAAAGGTATTTCAGAATGTGTGTGTGTGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| CDS-3UTR CAA 90 bp | CCTCCCTACTCTGAAGGGATGATATGCTCCTCTGAGCTTGAACACTCAAGTACTTACTTATGCATGGAGTaGAGGATGATATGGCCAAAG | + |
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Preference number: 5 (lower is better) Translates to: PPYSEGMICSSELEHSSTYLCME*RMIWPK Trigger: CTTTGGCCATATCATCCTCAACTCCATGCATAAGTA...AGTACTTGAGTGTTCAAGCTCAGAGGAGCATATCATCCCTTCAGAGTAGGGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| CDS-3UTR CAA 90 bp | CACACACACACACACATTCTGAAATACCTTTCCATGTTTCTTGGCAGTGCTGGCTACTTATGCATGGAGTaGAGGATGATATGGCCAAAG | + |
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Preference number: 5 (lower is better) Translates to: HTHTHILKYLSMFLGSAGYLCME*RMIWPK Trigger: CTTTGGCCATATCATCCTCAACTCCATGCATAAGTA...GCCAGCACTGCCAAGAAACATGGAAAGGTATTTCAGAATGTGTGTGTGTGTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| CDS GCA 72 bp | GACGTCGGCGCCCTGGCCCGGTGGGCTGCTGAGCGCTaGTCCACTAAGGCCCGGCGTGGCCAGCGCGGGTTC | + |
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Preference number: 6 (lower is better) Translates to: DVGALARWAAER*STKARRGQRGF Trigger: GAACCCGCGCTGGCCACGCCGGGCCTTAGTGGAGCAGCGCTCAGCAGCCCACCGGGCCAGGGCGCCGACGTC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000096.12 ENSMUST00000108047.8 |
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| CDS CAA 90 bp | GCTGCTCCACTAAGGCCCGGCGTGGCCAGCGCGGGTTCGGGGGCGTaGGTGGTGCTAGTGTTGCTGGCCTCCCCGAGAGCTGGGCCCGGG | + |
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Preference number: 6 (lower is better) Translates to: AAPLRPGVASAGSGA*VVLVLLASPRAGPG Trigger: CCCGGGCCCAGCTCTCGGGGAGGCCAGCAACACTAGCACCACCAACGCCCCCGAACCCGCGCTGGCCACGCCGGGCCTTAGTGGAGCAGC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000096.12 ENSMUST00000108047.8 |
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| CDS CAA 72 bp | CTAAGGCCCGGCGTGGCCAGCGCGGGTTCGGGGGCGTaGGTGGTGCTAGTGTTGCTGGCCTCCCCGAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: LRPGVASAGSGA*VVLVLLASPRA Trigger: AGCTCTCGGGGAGGCCAGCAACACTAGCACCACCAACGCCCCCGAACCCGCGCTGGCCACGCCGGGCCTTAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000096.12 ENSMUST00000108047.8 |
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| CDS TCA 72 bp | TGTTGCTGGCCTCCCCGAGAGCTGGGCCCGGGGCCCTaGAGGCCTCCTCGCTCTCGGACAGGCCCTTATCCT | + |
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Preference number: 6 (lower is better) Translates to: CCWPPRELGPGP*RPPRSRTGPYP Trigger: AGGATAAGGGCCTGTCCGAGAGCGAGGAGGCCTTCAGGGCCCCGGGCCCAGCTCTCGGGGAGGCCAGCAACA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000096.12 ENSMUST00000108047.8 |
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| CDS GCA 72 bp | TTCTCATGCAGCCCCACCTTGATGTTCTCGATGGTCTaGTCCGCGGCGGCAGCGGCGGCGGCGGCGACGTCG | + |
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Preference number: 6 (lower is better) Translates to: FSCSPTLMFSMV*SAAAAAAAATS Trigger: CGACGTCGCCGCCGCCGCCGCTGCCGCCGCGGAGCAGACCATCGAGAACATCAAGGTGGGGCTGCATGAGAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000096.12 ENSMUST00000108047.8 |
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| CDS CCA 72 bp | GTTGGTGGTGCTAGTGTTGCTGGCCTCCCCGAGAGCTaGGCCCGGGGCCCTGAAGGCCTCCTCGCTCTCGGA | + |
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Preference number: 6 (lower is better) Translates to: VGGASVAGLPES*ARGPEGLLALG Trigger: TCCGAGAGCGAGGAGGCCTTCAGGGCCCCGGGCCCAGCTCTCGGGGAGGCCAGCAACACTAGCACCACCAAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000096.12 ENSMUST00000108047.8 |
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| CDS CCA 72 bp | CAGGGCCTGGTGTGCGCTGTGCAGGGGGCTGACATCTaGCTTAGCCGAGAGTTGGCTGGAAACGAGCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: QGLVCAVQGADI*LSRELAGNEPL Trigger: CAGAGGCTCGTTTCCAGCCAACTCTCGGCTAAGCCAGATGTCAGCCCCCTGCACAGCGCACACCAGGCCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| CDS GCA 72 bp | CCCCCACTGAAGAGGGGGTTTCCAGGTAGGATCGCTTaGAGGGCAAGTCCAGGTGGCGGGCACTGTCTCTAC | + |
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Preference number: 6 (lower is better) Translates to: PPLKRGFPGRIA*RASPGGGHCLY Trigger: GTAGAGACAGTGCCCGCCACCTGGACTTGCCCTGCAAGCGATCCTACCTGGAAACCCCCTCTTCAGTGGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| CDS TCA 72 bp | ACTTCTTCCACAGCTCCTTCTCATGCAGCCCCACCTTaGTGTTCTCGATGGTCTGCTCCGCGGCGGCAGCGG | + |
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Preference number: 6 (lower is better) Translates to: TSSTAPSHAAPP*CSRWSAPRRQR Trigger: CCGCTGCCGCCGCGGAGCAGACCATCGAGAACATCAAGGTGGGGCTGCATGAGAAGGAGCTGTGGAAGAAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000096.12 ENSMUST00000108047.8 |
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| CDS CCA 72 bp | GGTGGCAGGAGAATCCGGGTGCACATAAAGTCTTCCTaGCATGGCCGGCTCAGCCTTCCCTGCGACCATCCA | + |
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Preference number: 6 (lower is better) Translates to: GGRRIRVHIKSS*HGRLSLPCDHP Trigger: TGGATGGTCGCAGGGAAGGCTGAGCCGGCCATGCCAGGAAGACTTTATGTGCACCCGGATTCTCCTGCCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| CDS CAA 90 bp | CTGGTGTGCGCTGTGCAGGGGGCTGACATCTGGCTTAGCCGAGAGTaGGCTGGAAACGAGCCTCTGCCTCATGATGCTTTTGGAGATCAC | + |
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Preference number: 6 (lower is better) Translates to: LVCAVQGADIWLSRE*AGNEPLPHDAFGDH Trigger: GTGATCTCCAAAAGCATCATGAGGCAGAGGCTCGTTTCCAGCCAACTCTCGGCTAAGCCAGATGTCAGCCCCCTGCACAGCGCACACCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| CDS GCA 72 bp | CCTGCCTCGTGGAACTTCTTCCACAGCTCCTTCTCATaGAGCCCCACCTTGATGTTCTCGATGGTCTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: PASWNFFHSSFS*SPTLMFSMVCS Trigger: GGAGCAGACCATCGAGAACATCAAGGTGGGGCTGCATGAGAAGGAGCTGTGGAAGAAGTTCCACGAGGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000096.12 ENSMUST00000108047.8 |
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| CDS CCA 72 bp | CTGTGCAGGGGGCTGACATCTGGCTTAGCCGAGAGTTaGCTGGAAACGAGCCTCTGCCTCATGATGCTTTTG | + |
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Preference number: 6 (lower is better) Translates to: LCRGLTSGLAES*LETSLCLMMLL Trigger: CAAAAGCATCATGAGGCAGAGGCTCGTTTCCAGCCAACTCTCGGCTAAGCCAGATGTCAGCCCCCTGCACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| CDS CAA 72 bp | GCTGTGCAGGGGGCTGACATCTGGCTTAGCCGAGAGTaGGCTGGAAACGAGCCTCTGCCTCATGATGCTTTT | + |
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Preference number: 6 (lower is better) Translates to: AVQGADIWLSRE*AGNEPLPHDAF Trigger: AAAAGCATCATGAGGCAGAGGCTCGTTTCCAGCCAACTCTCGGCTAAGCCAGATGTCAGCCCCCTGCACAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| CDS CCA 72 bp | CACAGTCTCCATGGTCTGAACGCTGTAGCTGGTGTATaGCGACACCGACGTCCACATGTTACAGCTCAGTGG | + |
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Preference number: 6 (lower is better) Translates to: HSLHGLNAVAGV*RHRRPHVTAQW Trigger: CCACTGAGCTGTAACATGTGGACGTCGGTGTCGCCATACACCAGCTACAGCGTTCAGACCATGGAGACTGTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| CDS CCA 72 bp | GGTAAGGCACAGTCTCCATGGTCTGAACGCTGTAGCTaGTGTATGGCGACACCGACGTCCACATGTTACAGC | + |
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Preference number: 6 (lower is better) Translates to: GKAQSPWSERCS*CMATPTSTCYS Trigger: GCTGTAACATGTGGACGTCGGTGTCGCCATACACCAGCTACAGCGTTCAGACCATGGAGACTGTGCCTTACC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| CDS CCA 72 bp | GGGTCAAGGAGAAGCTCTGTGAGTAGAGGAACTCGTTaGCAGTGTTCAGGTGAGGTGAGGGTGGCTTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: GSRRSSVSRGTR*QCSGEVRVASS Trigger: AGAGGAAGCCACCCTCACCTCACCTGAACACTGCCAACGAGTTCCTCTACTCACAGAGCTTCTCCTTGACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| CDS GCA 72 bp | TCTGGCTTAGCCGAGAGTTGGCTGGAAACGAGCCTCTaGCTCATGATGCTTTTGGAGATCACGGGATACTCC | + |
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Preference number: 6 (lower is better) Translates to: SGLAESWLETSL*LMMLLEITGYS Trigger: GGAGTATCCCGTGATCTCCAAAAGCATCATGAGGCAGAGGCTCGTTTCCAGCCAACTCTCGGCTAAGCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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| CDS TCA 72 bp | ACTTGTAGCGATGGTCATCTGCGGGGACGATGTCGATaGGAAGTATGTACTTGGTCTTGGGGTTCATGCCTG | + |
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Preference number: 6 (lower is better) Translates to: TCSDGHLRGRCR*EVCTWSWGSCL Trigger: CAGGCATGAACCCCAAGACCAAGTACATACTTCTCATCGACATCGTCCCCGCAGATGACCATCGCTACAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000096.12 ENSMUST00000108045.3 ENSMUST00000108047.8 |
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