Pregenerated sensors for TBX22 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031241Ensembl transcript IDs: ENSMUST00000068451.12, ENSMUST00000118986.8, ENSMUST00000168174.9, ENSMUST00000168403.2, ENSMUST00000172682.8
Found 184 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCCAGAGCAAGGGGAGTCCGGGTGGACATAGAATCTGGGAGTTATaGACGAATGGTCAGTATTTCCAGCTACCATCCACTGTGAGCTGT | + |
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Preference number: 1 (lower is better) Translates to: LQSKGSPGGHRIWEL*TNGQYFQLPSTVSC Trigger: ACAGCTCACAGTGGATGGTAGCTGGAAATACTGACCATTCGTGCATAACTCCCAGATTCTATGTCCACCCGGACTCCCCTTGCTCTGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172682.8 |
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| 3UTR CCA 90 bp | TCCAGTTTTCTCCAGAGCAAGGGGAGTCCGGGTGGACATAGAATCTaGGAGTTATGCACGAATGGTCAGTATTTCCAGCTACCATCCACT | + |
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Preference number: 1 (lower is better) Translates to: SSFLQSKGSPGGHRI*ELCTNGQYFQLPST Trigger: AGTGGATGGTAGCTGGAAATACTGACCATTCGTGCATAACTCCCAGATTCTATGTCCACCCGGACTCCCCTTGCTCTGGAGAAAACTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172682.8 |
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| 3UTR CCA 90 bp | CATGTCCATCTTCAGTCCATATGGAGAACTCATACTTTAAAACACTaGGAACCACCCATCTCTTCACAGCTTGGGAGCTTTAAAGAAGTG | + |
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Preference number: 1 (lower is better) Translates to: HVHLQSIWRTHTLKH*EPPISSQLGSFKEV Trigger: CACTTCTTTAAAGCTCCCAAGCTGTGAAGAGATGGGTGGTTCCCAGTGTTTTAAAGTATGAGTTCTCCATATGGACTGAAGATGGACATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
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| 3UTR TCA 90 bp | AATCCTTCCCTGACCAGGGAATCTGACTTCAGGTCTAAGTATGACTaGGAGTTGTGCAAGGATAAAATATCACTCACATATTTCCTGACT | + |
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Preference number: 1 (lower is better) Translates to: NPSLTRESDFRSKYD*ELCKDKISLTYFLT Trigger: AGTCAGGAAATATGTGAGTGATATTTTATCCTTGCACAACTCTCAGTCATACTTAGACCTGAAGTCAGATTCCCTGGTCAGGGAAGGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168174.9 |
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| 3UTR GCA 90 bp | TTAAGAAGACTCTTCCATAATGTCCAGTGCAGATGCTTGTCTTTATaGATTGTTGGCAACCATGTCATGTTGTCAGCACATAAGACACTG | + |
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Preference number: 1 (lower is better) Translates to: LRRLFHNVQCRCLSL*IVGNHVMLSAHKTL Trigger: CAGTGTCTTATGTGCTGACAACATGACATGGTTGCCAACAATGCATAAAGACAAGCATCTGCACTGGACATTATGGAAGAGTCTTCTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
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| 3UTR GCA 90 bp | TATGCATTGTTGGCAACCATGTCATGTTGTCAGCACATAAGACACTaGTGGTTCAAAGATTATCCATTGAATCATCCCTTGCTTAGACTA | + |
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Preference number: 1 (lower is better) Translates to: YALLATMSCCQHIRH*WFKDYPLNHPLLRL Trigger: TAGTCTAAGCAAGGGATGATTCAATGGATAATCTTTGAACCAGCAGTGTCTTATGTGCTGACAACATGACATGGTTGCCAACAATGCATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
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| 3UTR GCA 90 bp | TGTGAGCCAATAAAGTTGTATATGCATTTCAACCAAACACAAAGATaGGATACATTTTCCCGAACATCTGCTCACCATAATGTATGTTTA | + |
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Preference number: 1 (lower is better) Translates to: CEPIKLYMHFNQTQR*DTFSRTSAHHNVCL Trigger: TAAACATACATTATGGTGAGCAGATGTTCGGGAAAATGTATCGCATCTTTGTGTTTGGTTGAAATGCATATACAACTTTATTGGCTCACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 |
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| 3UTR CAA 90 bp | GACTCTTCCATAATGTCCAGTGCAGATGCTTGTCTTTATGCATTGTaGGCAACCATGTCATGTTGTCAGCACATAAGACACTGCTGGTTC | + |
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Preference number: 2 (lower is better) Translates to: DSSIMSSADACLYAL*ATMSCCQHIRHCWF Trigger: GAACCAGCAGTGTCTTATGTGCTGACAACATGACATGGTTGCCAACAATGCATAAAGACAAGCATCTGCACTGGACATTATGGAAGAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGTGCAGATGCTTGTCTTTATGCATTGTTGGCAACCATGTCATGTTGTCAGCCATACTTTAAAACACTaGGAACCACCCATCTCTTCA | + |
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Preference number: 2 (lower is better) Translates to: PVQMLVFMHCWQPCHVVSHTLKH*EPPISS Trigger: TGAAGAGATGGGTGGTTCCCAGTGTTTTAAAGTATG...GCTGACAACATGACATGGTTGCCAACAATGCATAAAGACAAGCATCTGCACTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
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| 3UTR-3UTR CCA 90 bp | TCCAGTGCAGATGCTTGTCTTTATGCATTGTTGGCAACCATGTCATGTTGTCAGATTTCAGCTACATTCTaGCTCAGCCAGAAAACTGAC | + |
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Preference number: 2 (lower is better) Translates to: SSADACLYALLATMSCCQISATF*LSQKTD Trigger: GTCAGTTTTCTGGCTGAGCCAGAATGTAGCTGAAAT...CTGACAACATGACATGGTTGCCAACAATGCATAAAGACAAGCATCTGCACTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 |
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| 3UTR-3UTR CCA 90 bp | AGACTCTTCCATAATGTCCAGTGCAGATGCTTGTCTTTATGCATTGTTGGCAACCATACTTTAAAACACTaGGAACCACCCATCTCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: RLFHNVQCRCLSLCIVGNHTLKH*EPPISS Trigger: TGAAGAGATGGGTGGTTCCCAGTGTTTTAAAGTATG...GTTGCCAACAATGCATAAAGACAAGCATCTGCACTGGACATTATGGAAGAGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
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| 3UTR-3UTR GCA 90 bp | TATCTAGTGAGCAAATTTTCAGTACAGCATCTCTCTTTAGGAGTGGGAGAAAAATGTACCTGCTTTGTGTaGCATGATTTTCCCAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: YLVSKFSVQHLSLGVGEKCTCFV*HDFPKV Trigger: CACCTTGGGAAAATCATGGCACACAAAGCAGGTACA...TTTTTCTCCCACTCCTAAAGAGAGATGCTGTACTGAAAATTTGCTCACTAGATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 |
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| 3UTR-3UTR CCA 90 bp | GCTACATTTGTACCTGCTTTGTGTGCCATGATTTTCCCAAGGTGCAAAATAGAAGTCTTTATGCATTGTTaGCAACCATGTCATGTTGTC | + |
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Preference number: 2 (lower is better) Translates to: ATFVPALCAMIFPRCKIEVFMHC*QPCHVV Trigger: GACAACATGACATGGTTGCCAACAATGCATAAAGAC...TTCTATTTTGCACCTTGGGAAAATCATGGCACACAAAGCAGGTACAAATGTAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 |
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| 3UTR-3UTR CCA 90 bp | GCATTTCAACCAAACACAAAGATGCGATACATTTTCCCGAACATCTGCTCACCAAGTGACCAAACTATTTaGTTTGTTTTGAACTGCTCC | + |
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Preference number: 2 (lower is better) Translates to: AFQPNTKMRYIFPNICSPSDQTI*FVLNCS Trigger: GGAGCAGTTCAAAACAAACCAAATAGTTTGGTCACT...TGGTGAGCAGATGTTCGGGAAAATGTATCGCATCTTTGTGTTTGGTTGAAATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 |
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| 3UTR-3UTR GCA 90 bp | GTATATGCATTTCAACCAAACACAAAGATGCGATACATTTTCCCGAACATCTGCCAGCACATAAGACACTaGTGGTTCAAAGATTATCCA | + |
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Preference number: 2 (lower is better) Translates to: VYAFQPNTKMRYIFPNICQHIRH*WFKDYP Trigger: TGGATAATCTTTGAACCAGCAGTGTCTTATGTGCTG...GCAGATGTTCGGGAAAATGTATCGCATCTTTGTGTTTGGTTGAAATGCATATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 |
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| 3UTR-3UTR GCA 90 bp | GCTACATTTGTACCTGCTTTGTGTGCCATGATTTTCCCAAGGTGCAAAATAGAAAATGTCCAGTGCAGATaGTTGTCTTTATGCATTGTT | + |
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Preference number: 2 (lower is better) Translates to: ATFVPALCAMIFPRCKIENVQCR*LSLCIV Trigger: AACAATGCATAAAGACAAGCATCTGCACTGGACATT...TTCTATTTTGCACCTTGGGAAAATCATGGCACACAAAGCAGGTACAAATGTAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 |
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| 3UTR-3UTR TCA 90 bp | GTATATGCATTTCAACCAAACACAAAGATGCGATACATTTTCCCGAACATCTGCGAACATTTGAAACTTTaGGGGGAAATGATACTCATC | + |
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Preference number: 2 (lower is better) Translates to: VYAFQPNTKMRYIFPNICEHLKL*GEMILI Trigger: GATGAGTATCATTTCCCCTCAAAGTTTCAAATGTTC...GCAGATGTTCGGGAAAATGTATCGCATCTTTGTGTTTGGTTGAAATGCATATAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 |
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| 3UTR-3UTR GCA 90 bp | TATCTAGTGAGCAAATTTTCAGTACAGCATCTCTCTTTAGGAGTGGGAGAAAAATTCCATAATGTCCAGTaGAGATGCTTGTCTTTATGC | + |
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Preference number: 2 (lower is better) Translates to: YLVSKFSVQHLSLGVGEKFHNVQ*RCLSLC Trigger: GCATAAAGACAAGCATCTGCACTGGACATTATGGAA...TTTTTCTCCCACTCCTAAAGAGAGATGCTGTACTGAAAATTTGCTCACTAGATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 |
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| 3UTR-3UTR CCA 90 bp | TCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTTTCCTTTTGGTCTTAGGAAATTGTGTAGACTTAACTTCTaGCCTCAATTATCACTGATA | + |
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Preference number: 2 (lower is better) Translates to: SLSLSLSLFLFPFGLRKLCRLNF*PQLSLI Trigger: TATCAGTGATAATTGAGGCCAGAAGTTAAGTCTACA...CAATTTCCTAAGACCAAAAGGAAAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
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| 3UTR-3UTR GCA 90 bp | ATACATTTTCCCGAACATCTGCTCACCATAATGTATGTTTACAGATTAATGTGCTTCCATAATGTCCAGTaGAGATGCTTGTCTTTATGC | + |
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Preference number: 2 (lower is better) Translates to: IHFPEHLLTIMYVYRLMCFHNVQ*RCLSLC Trigger: GCATAAAGACAAGCATCTGCACTGGACATTATGGAA...GCACATTAATCTGTAAACATACATTATGGTGAGCAGATGTTCGGGAAAATGTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 |
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| 3UTR CCA 72 bp | CTCCAGAGCAAGGGGAGTCCGGGTGGACATAGAATCTaGGAGTTATGCACGAATGGTCAGTATTTCCAGCTA | + |
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Preference number: 3 (lower is better) Translates to: LQSKGSPGGHRI*ELCTNGQYFQL Trigger: TAGCTGGAAATACTGACCATTCGTGCATAACTCCCAGATTCTATGTCCACCCGGACTCCCCTTGCTCTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172682.8 |
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| 3UTR GCA 72 bp | AAGGGGAGTCCGGGTGGACATAGAATCTGGGAGTTATaGACGAATGGTCAGTATTTCCAGCTACCATCCACT | + |
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Preference number: 3 (lower is better) Translates to: KGSPGGHRIWEL*TNGQYFQLPST Trigger: AGTGGATGGTAGCTGGAAATACTGACCATTCGTGCATAACTCCCAGATTCTATGTCCACCCGGACTCCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172682.8 |
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| 3UTR-3UTR CAA 90 bp | CAGTGCAGATGCTTGTCTTTATGCATTGTTGGCAACCATGTCATGTTGTCAGCACCATCTCTTCACAGCTaGGGAGCTTTAAAGAAGTGT | + |
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Preference number: 3 (lower is better) Translates to: QCRCLSLCIVGNHVMLSAPSLHS*GALKKC Trigger: ACACTTCTTTAAAGCTCCCAAGCTGTGAAGAGATGG...TGCTGACAACATGACATGGTTGCCAACAATGCATAAAGACAAGCATCTGCACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
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| 3UTR-3UTR CAA 90 bp | GCATTTCAACCAAACACAAAGATGCGATACATTTTCCCGAACATCTGCTCACCAGGCAACCATGTCATGTaGTCAGCACATAAGACACTG | + |
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Preference number: 3 (lower is better) Translates to: AFQPNTKMRYIFPNICSPGNHVM*SAHKTL Trigger: CAGTGTCTTATGTGCTGACAACATGACATGGTTGCC...TGGTGAGCAGATGTTCGGGAAAATGTATCGCATCTTTGTGTTTGGTTGAAATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 |
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| 3UTR-3UTR CAA 90 bp | GCATTTCAACCAAACACAAAGATGCGATACATTTTCCCGAACATCTGCTCACCACCATCTCTTCACAGCTaGGGAGCTTTAAAGAAGTGT | + |
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Preference number: 3 (lower is better) Translates to: AFQPNTKMRYIFPNICSPPSLHS*GALKKC Trigger: ACACTTCTTTAAAGCTCCCAAGCTGTGAAGAGATGG...TGGTGAGCAGATGTTCGGGAAAATGTATCGCATCTTTGTGTTTGGTTGAAATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 |
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| 3UTR GCA 72 bp | CTCTTCCATAATGTCCAGTGCAGATGCTTGTCTTTATaGATTGTTGGCAACCATGTCATGTTGTCAGCACAT | + |
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Preference number: 3 (lower is better) Translates to: LFHNVQCRCLSL*IVGNHVMLSAH Trigger: ATGTGCTGACAACATGACATGGTTGCCAACAATGCATAAAGACAAGCATCTGCACTGGACATTATGGAAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
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| 3UTR GCA 72 bp | TTGGCAACCATGTCATGTTGTCAGCACATAAGACACTaGTGGTTCAAAGATTATCCATTGAATCATCCCTTG | + |
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Preference number: 3 (lower is better) Translates to: LATMSCCQHIRH*WFKDYPLNHPL Trigger: CAAGGGATGATTCAATGGATAATCTTTGAACCAGCAGTGTCTTATGTGCTGACAACATGACATGGTTGCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
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| 3UTR-3UTR CAA 90 bp | GTATATGCATTTCAACCAAACACAAAGATGCGATACATTTTCCCGAACATCTGCCCATCTCTTCACAGCTaGGGAGCTTTAAAGAAGTGT | + |
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Preference number: 3 (lower is better) Translates to: VYAFQPNTKMRYIFPNICPSLHS*GALKKC Trigger: ACACTTCTTTAAAGCTCCCAAGCTGTGAAGAGATGG...GCAGATGTTCGGGAAAATGTATCGCATCTTTGTGTTTGGTTGAAATGCATATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 |
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| 3UTR-3UTR CAA 90 bp | TCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTTTCCTTTTGGTCTTAGGAAATTGGCTTGTCTTTATGCATaGTTGGCAACCATGTCATGT | + |
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Preference number: 3 (lower is better) Translates to: SLSLSLSLFLFPFGLRKLACLYA*LATMSC Trigger: ACATGACATGGTTGCCAACAATGCATAAAGACAAGC...CAATTTCCTAAGACCAAAAGGAAAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168174.9 |
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| 3UTR-3UTR CAA 90 bp | TTTCAGCTACATTCTGGCTCAGCCAGAAAACTGACTGGCACATCAGTAATATTTACATTTGTACCTGCTTaGTGTGCCATGATTTTCCCA | + |
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Preference number: 3 (lower is better) Translates to: FQLHSGSARKLTGTSVIFTFVPA*CAMIFP Trigger: TGGGAAAATCATGGCACACAAAGCAGGTACAAATGT...AAATATTACTGATGTGCCAGTCAGTTTTCTGGCTGAGCCAGAATGTAGCTGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 |
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| 3UTR-3UTR CAA 90 bp | ATACATTTTCCCGAACATCTGCTCACCATAATGTATGTTTACAGATTAATGTGCGGCAACCATGTCATGTaGTCAGCACATAAGACACTG | + |
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Preference number: 3 (lower is better) Translates to: IHFPEHLLTIMYVYRLMCGNHVM*SAHKTL Trigger: CAGTGTCTTATGTGCTGACAACATGACATGGTTGCC...GCACATTAATCTGTAAACATACATTATGGTGAGCAGATGTTCGGGAAAATGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 |
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| 3UTR-3UTR CAA 90 bp | GCTACATTTGTACCTGCTTTGTGTGCCATGATTTTCCCAAGGTGCAAAATAGAATGTCTTTATGCATTGTaGGCAACCATGTCATGTTGT | + |
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Preference number: 3 (lower is better) Translates to: ATFVPALCAMIFPRCKIECLYAL*ATMSCC Trigger: ACAACATGACATGGTTGCCAACAATGCATAAAGACA...TTCTATTTTGCACCTTGGGAAAATCATGGCACACAAAGCAGGTACAAATGTAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 |
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| 3UTR-3UTR CAA 90 bp | TGTGAGCCAATAAAGTTGTATATGCATTTCAACCAAACACAAAGATGCGATACAGTCCAGTGCAGATGCTaGTCTTTATGCATTGTTGGC | + |
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Preference number: 3 (lower is better) Translates to: CEPIKLYMHFNQTQRCDTVQCRC*SLCIVG Trigger: GCCAACAATGCATAAAGACAAGCATCTGCACTGGAC...TGTATCGCATCTTTGTGTTTGGTTGAAATGCATATACAACTTTATTGGCTCACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 |
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| 3UTR-3UTR CAA 90 bp | GTATATGCATTTCAACCAAACACAAAGATGCGATACATTTTCCCGAACATCTGCACATTTGTACCTGCTTaGTGTGCCATGATTTTCCCA | + |
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Preference number: 3 (lower is better) Translates to: VYAFQPNTKMRYIFPNICTFVPA*CAMIFP Trigger: TGGGAAAATCATGGCACACAAAGCAGGTACAAATGT...GCAGATGTTCGGGAAAATGTATCGCATCTTTGTGTTTGGTTGAAATGCATATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 |
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| 3UTR GCA 72 bp | AATTTAAGAAGACTCTTCCATAATGTCCAGTGCAGATaGTTGTCTTTATGCATTGTTGGCAACCATGTCATG | + |
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Preference number: 3 (lower is better) Translates to: NLRRLFHNVQCR*LSLCIVGNHVM Trigger: CATGACATGGTTGCCAACAATGCATAAAGACAAGCATCTGCACTGGACATTATGGAAGAGTCTTCTTAAATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
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| 3UTR GCA 72 bp | ATAAAGTTGTATATGCATTTCAACCAAACACAAAGATaGGATACATTTTCCCGAACATCTGCTCACCATAAT | + |
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Preference number: 3 (lower is better) Translates to: IKLYMHFNQTQR*DTFSRTSAHHN Trigger: ATTATGGTGAGCAGATGTTCGGGAAAATGTATCGCATCTTTGTGTTTGGTTGAAATGCATATACAACTTTAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 |
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| CDS-3UTR GCA 90 bp | GCTGTGATACACATACCTATAGCGTTTGGAATCCACCGGTACCACGTCCAAAATTCCACGGAGAAGGCGTaGGCGCGAGAGCTCAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: AVIHIPIAFGIHRYHVQNSTEKA*ARELRA Trigger: GGCTCTGAGCTCTCGCGCGCACGCCTTCTCCGTGGA...ATTTTGGACGTGGTACCGGTGGATTCCAAACGCTATAGGTATGTGTATCACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172682.8 |
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| CDS-3UTR GCA 90 bp | CATCCAGTTTTCTCCAGAGCAAGGGGAGTCCGGGTGGACATAGAATCTGGGAGTTCCTGCAGCTCAGGCTaGATCTCCTCTCTTGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: HPVFSRARGVRVDIESGSSCSSG*ISSLGS Trigger: AGACCCAAGAGAGGAGATGCAGCCTGAGCTGCAGGA...ACTCCCAGATTCTATGTCCACCCGGACTCCCCTTGCTCTGGAGAAAACTGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172682.8 |
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| CDS-3UTR GCA 90 bp | CGGGTGGACATAGAATCTGGGAGTTATGCACGAATGGTCAGTATTTCCAGCTACCCTTCCTCCACGAACTaGTCCTCCTGCAGCTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: RVDIESGSYARMVSISSYPSSTN*SSCSSG Trigger: GCCTGAGCTGCAGGAGGAGCAGTTCGTGGAGGAAGG...GTAGCTGGAAATACTGACCATTCGTGCATAACTCCCAGATTCTATGTCCACCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172682.8 |
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| CDS-3UTR TCA 90 bp | CCGGGTGGACATAGAATCTGGGAGTTATGCACGAATGGTCAGTATTTCCAGCTACATACGTCGGGCTGTTaGCTGTCCCTAGAAGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: PGGHRIWELCTNGQYFQLHTSGC*LSLEGL Trigger: GAGCCCTTCTAGGGACAGTCAACAGCCCGACGTATG...TAGCTGGAAATACTGACCATTCGTGCATAACTCCCAGATTCTATGTCCACCCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172682.8 |
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| CDS-3UTR GCA 90 bp | TCCAGTGCAGATGCTTGTCTTTATGCATTGTTGGCAACCATGTCATGTTGTCAGCCTTCCTCCACGAACTaGTCCTCCTGCAGCTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: SSADACLYALLATMSCCQPSSTN*SSCSSG Trigger: GCCTGAGCTGCAGGAGGAGCAGTTCGTGGAGGAAGG...CTGACAACATGACATGGTTGCCAACAATGCATAAAGACAAGCATCTGCACTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168174.9 |
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| CDS-3UTR TCA 90 bp | AAACACTGGGAACCACCCATCTCTTCACAGCTTGGGAGCTTTAAAGAAGTGTCTCTGGGACTTCCATCATaGGTGGGGGTAAGGTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: KHWEPPISSQLGSFKEVSLGLPS*VGVRSE Trigger: CTCAGACCTTACCCCCACTCATGATGGAAGTCCCAG...AGACACTTCTTTAAAGCTCCCAAGCTGTGAAGAGATGGGTGGTTCCCAGTGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
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| CDS-3UTR GCA 90 bp | TCAAGTGCTCTTTGCATCCCTCCAGTATTAAATATTATTCATGCTACACAGGTTTCCACGGAGAAGGCGTaGGCGCGAGAGCTCAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: SSALCIPPVLNIIHATQVSTEKA*ARELRA Trigger: GGCTCTGAGCTCTCGCGCGCACGCCTTCTCCGTGGA...AACCTGTGTAGCATGAATAATATTTAATACTGGAGGGATGCAAAGAGCACTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
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| CDS-3UTR GCA 90 bp | TCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTTTCCTTTTGGTCTTAGGAAATTGCCTTCCTCCACGAACTaGTCCTCCTGCAGCTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLSLSLSLFLFPFGLRKLPSSTN*SSCSSG Trigger: GCCTGAGCTGCAGGAGGAGCAGTTCGTGGAGGAAGG...CAATTTCCTAAGACCAAAAGGAAAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
||
| CDS-3UTR GCA 90 bp | GCATTTCAACCAAACACAAAGATGCGATACATTTTCCCGAACATCTGCTCACCATCCTGCAGCTCAGGCTaGATCTCCTCTCTTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: AFQPNTKMRYIFPNICSPSCSSG*ISSLGS Trigger: AGACCCAAGAGAGGAGATGCAGCCTGAGCTGCAGGA...TGGTGAGCAGATGTTCGGGAAAATGTATCGCATCTTTGTGTTTGGTTGAAATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168174.9 |
||
| CDS-3UTR TCA 90 bp | GCATTTCAACCAAACACAAAGATGCGATACATTTTCCCGAACATCTGCTCACCAAGAGGTCACTGGAGATaGGCCACTGCTTCCACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: AFQPNTKMRYIFPNICSPRGHWR*ATASTL Trigger: CAAAGTGGAAGCAGTGGCTCATCTCCAGTGACCTCT...TGGTGAGCAGATGTTCGGGAAAATGTATCGCATCTTTGTGTTTGGTTGAAATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 |
||
| CDS-3UTR TCA 90 bp | AGACTCTTCCATAATGTCCAGTGCAGATGCTTGTCTTTATGCATTGTTGGCAACAGAGGTCACTGGAGATaGGCCACTGCTTCCACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RLFHNVQCRCLSLCIVGNRGHWR*ATASTL Trigger: CAAAGTGGAAGCAGTGGCTCATCTCCAGTGACCTCT...GTTGCCAACAATGCATAAAGACAAGCATCTGCACTGGACATTATGGAAGAGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
||
| CDS-3UTR TCA 90 bp | CCAGTGCAGATGCTTGTCTTTATGCATTGTTGGCAACCATGTCATGTTGTCAGCAGTGGGGGTAAGGTCTaGGGAATGATGAAACTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PVQMLVFMHCWQPCHVVSSGGKV*GMMKLG Trigger: ACCAAGTTTCATCATTCCTCAGACCTTACCCCCACT...GCTGACAACATGACATGGTTGCCAACAATGCATAAAGACAAGCATCTGCACTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
||
| CDS-3UTR TCA 90 bp | TCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTTTCCTTTTGGTCTTAGGAAATTGCTGGGACTTCCATCATaGGTGGGGGTAAGGTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLSLSLSLFLFPFGLRKLLGLPS*VGVRSE Trigger: CTCAGACCTTACCCCCACTCATGATGGAAGTCCCAG...CAATTTCCTAAGACCAAAAGGAAAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
||
| CDS-3UTR GCA 90 bp | TCCAGTGCAGATGCTTGTCTTTATGCATTGTTGGCAACCATGTCATGTTGTCAGCTGGAGATGAGCCACTaGTTCCACTTTGTGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSADACLYALLATMSCCQLEMSH*FHFVCL Trigger: CAGACACACAAAGTGGAAGCAGTGGCTCATCTCCAG...CTGACAACATGACATGGTTGCCAACAATGCATAAAGACAAGCATCTGCACTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
||
| CDS-3UTR GCA 90 bp | CAGTGCAGATGCTTGTCTTTATGCATTGTTGGCAACCATGTCATGTTGTCAGCACTGGAGATGAGCCACTaGTTCCACTTTGTGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QCRCLSLCIVGNHVMLSALEMSH*FHFVCL Trigger: CAGACACACAAAGTGGAAGCAGTGGCTCATCTCCAG...TGCTGACAACATGACATGGTTGCCAACAATGCATAAAGACAAGCATCTGCACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
||
| CDS-3UTR GCA 90 bp | TCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTTTCCTTTTGGTCTTAGGAAATTGTCCTGCAGCTCAGGCTaGATCTCCTCTCTTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLSLSLSLFLFPFGLRKLSCSSG*ISSLGS Trigger: AGACCCAAGAGAGGAGATGCAGCCTGAGCTGCAGGA...CAATTTCCTAAGACCAAAAGGAAAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
||
| CDS-3UTR CCA 90 bp | AGACTCTTCCATAATGTCCAGTGCAGATGCTTGTCTTTATGCATTGTTGGCAACCCTGGAGGATACCACTaGGACTTCCATCATGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RLFHNVQCRCLSLCIVGNPGGYH*DFHHEW Trigger: CCACTCATGATGGAAGTCCCAGTGGTATCCTCCAGG...GTTGCCAACAATGCATAAAGACAAGCATCTGCACTGGACATTATGGAAGAGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
||
| CDS-3UTR TCA 90 bp | ATAATGTCCAGTGCAGATGCTTGTCTTTATGCATTGTTGGCAACCATGTCATGTAGAGGTCACTGGAGATaGGCCACTGCTTCCACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: IMSSADACLYALLATMSCRGHWR*ATASTL Trigger: CAAAGTGGAAGCAGTGGCTCATCTCCAGTGACCTCT...ACATGACATGGTTGCCAACAATGCATAAAGACAAGCATCTGCACTGGACATTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
||
| CDS-3UTR TCA 90 bp | GTATATGCATTTCAACCAAACACAAAGATGCGATACATTTTCCCGAACATCTGCCTGGGACTTCCATCATaGGTGGGGGTAAGGTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VYAFQPNTKMRYIFPNICLGLPS*VGVRSE Trigger: CTCAGACCTTACCCCCACTCATGATGGAAGTCCCAG...GCAGATGTTCGGGAAAATGTATCGCATCTTTGTGTTTGGTTGAAATGCATATAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 |
||
| CDS-3UTR TCA 90 bp | AAACACTGGGAACCACCCATCTCTTCACAGCTTGGGAGCTTTAAAGAAGTGTCTCCATTTTCACTGAGGTaGCTGGCAACATTTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KHWEPPISSQLGSFKEVSPFSLR*LATFSS Trigger: ACTGGAAAATGTTGCCAGTCACCTCAGTGAAAATGG...AGACACTTCTTTAAAGCTCCCAAGCTGTGAAGAGATGGGTGGTTCCCAGTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
||
| CDS-3UTR GCA 90 bp | CAGTGCAGATGCTTGTCTTTATGCATTGTTGGCAACCATGTCATGTTGTCAGCACGGGGGTTGTACTTATaGATGGACTGCAGAATGATC | + |
|
Preference number: 4 (lower is better) Translates to: QCRCLSLCIVGNHVMLSARGLYL*MDCRMI Trigger: GATCATTCTGCAGTCCATGCATAAGTACAACCCCCG...TGCTGACAACATGACATGGTTGCCAACAATGCATAAAGACAAGCATCTGCACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068451.12 ENSMUST00000168403.2 |
||
| CDS-3UTR GCA 90 bp | CCAGTGCAGATGCTTGTCTTTATGCATTGTTGGCAACCATGTCATGTTGTCAGCGATGCTTGTAGACACTaGCCATTGCAGTCTTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: PVQMLVFMHCWQPCHVVSDACRH*PLQSSC Trigger: ACATGAAGACTGCAATGGGCAGTGTCTACAAGCATC...GCTGACAACATGACATGGTTGCCAACAATGCATAAAGACAAGCATCTGCACTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
||
| CDS-3UTR CCA 90 bp | CCAGTGCAGATGCTTGTCTTTATGCATTGTTGGCAACCATGTCATGTTGTCAGCTTGGGCAATGGCGTTTaGATGGAAAATGTTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PVQMLVFMHCWQPCHVVSLGNGV*MENVSR Trigger: CCTGGAAACATTTTCCATCCAAACGCCATTGCCCAA...GCTGACAACATGACATGGTTGCCAACAATGCATAAAGACAAGCATCTGCACTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
||
| CDS-3UTR CCA 90 bp | GAGAACTCATACTTTAAAACACTGGGAACCACCCATCTCTTCACAGCTTGGGAGTTGGGCAATGGCGTTTaGATGGAAAATGTTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ENSYFKTLGTTHLFTAWELGNGV*MENVSR Trigger: CCTGGAAACATTTTCCATCCAAACGCCATTGCCCAA...CTCCCAAGCTGTGAAGAGATGGGTGGTTCCCAGTGTTTTAAAGTATGAGTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
||
| CDS-3UTR CCA 90 bp | AAACACTGGGAACCACCCATCTCTTCACAGCTTGGGAGCTTTAAAGAAGTGTCTATTTTCCAGTCTAGGTaGCATGGAGATGGTGTACCT | + |
|
Preference number: 4 (lower is better) Translates to: KHWEPPISSQLGSFKEVSIFQSR*HGDGVP Trigger: AGGTACACCATCTCCATGCCACCTAGACTGGAAAAT...AGACACTTCTTTAAAGCTCCCAAGCTGTGAAGAGATGGGTGGTTCCCAGTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
||
| CDS-3UTR TCA 90 bp | AATGTCCAGTGCAGATGCTTGTCTTTATGCATTGTTGGCAACCATGTCATGTTGAGTGGGGGTAAGGTCTaGGGAATGATGAAACTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: NVQCRCLSLCIVGNHVMLSGGKV*GMMKLG Trigger: ACCAAGTTTCATCATTCCTCAGACCTTACCCCCACT...CAACATGACATGGTTGCCAACAATGCATAAAGACAAGCATCTGCACTGGACATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
||
| CDS-3UTR TCA 90 bp | TTCCATAATGTCCAGTGCAGATGCTTGTCTTTATGCATTGTTGGCAACCATGTCAGTGGGGGTAAGGTCTaGGGAATGATGAAACTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FHNVQCRCLSLCIVGNHVSGGKV*GMMKLG Trigger: ACCAAGTTTCATCATTCCTCAGACCTTACCCCCACT...GACATGGTTGCCAACAATGCATAAAGACAAGCATCTGCACTGGACATTATGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
||
| CDS-3UTR TCA 90 bp | TATCTAGTGAGCAAATTTTCAGTACAGCATCTCTCTTTAGGAGTGGGAGAAAAACTGGGACTTCCATCATaGGTGGGGGTAAGGTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: YLVSKFSVQHLSLGVGEKLGLPS*VGVRSE Trigger: CTCAGACCTTACCCCCACTCATGATGGAAGTCCCAG...TTTTTCTCCCACTCCTAAAGAGAGATGCTGTACTGAAAATTTGCTCACTAGATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 |
||
| CDS-3UTR TCA 90 bp | AAACACTGGGAACCACCCATCTCTTCACAGCTTGGGAGCTTTAAAGAAGTGTCTCCATCTCATTGTTGGTaGGTTTCACTCGATCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KHWEPPISSQLGSFKEVSPSHCW*VSLDQK Trigger: CTTTTGATCGAGTGAAACTCACCAACAATGAGATGG...AGACACTTCTTTAAAGCTCCCAAGCTGTGAAGAGATGGGTGGTTCCCAGTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168174.9 |
||
| CDS-3UTR GCA 90 bp | CAGCTTGGGAGCTTTAAAGAAGTGTCTTCATTTTCGAAGCACAATGTAAATGTCGGGACAGGTCAATCCTaGTGTCCTGTTCCACCACAT | + |
|
Preference number: 4 (lower is better) Translates to: QLGSFKEVSSFSKHNVNVGTGQS*CPVPPH Trigger: ATGTGGTGGAACAGGACAGCAGGATTGACCTGTCCC...GACATTTACATTGTGCTTCGAAAATGAAGACACTTCTTTAAAGCTCCCAAGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068451.12 ENSMUST00000168403.2 |
||
| CDS-3UTR CCA 90 bp | CAGTGCAGATGCTTGTCTTTATGCATTGTTGGCAACCATGTCATGTTGTCAGCAGACTGCAGAATGATATaGCCCTTGTCATCCATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QCRCLSLCIVGNHVMLSADCRMI*PLSSIS Trigger: TGAGATGGATGACAAGGGCCATATCATTCTGCAGTC...TGCTGACAACATGACATGGTTGCCAACAATGCATAAAGACAAGCATCTGCACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168174.9 |
||
| CDS-3UTR TCA 90 bp | TCAAGTGCTCTTTGCATCCCTCCAGTATTAAATATTATTCATGCTACACAGGTTAGAGGTCACTGGAGATaGGCCACTGCTTCCACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSALCIPPVLNIIHATQVRGHWR*ATASTL Trigger: CAAAGTGGAAGCAGTGGCTCATCTCCAGTGACCTCT...AACCTGTGTAGCATGAATAATATTTAATACTGGAGGGATGCAAAGAGCACTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
||
| CDS-3UTR GCA 90 bp | CAGTGCAGATGCTTGTCTTTATGCATTGTTGGCAACCATGTCATGTTGTCAGCATACTTATGCATGGACTaGAGAATGATCTCCTCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: QCRCLSLCIVGNHVMLSAYLCMD*RMISSR Trigger: CCTAGAGGAGATCATTCTGCAGTCCATGCATAAGTA...TGCTGACAACATGACATGGTTGCCAACAATGCATAAAGACAAGCATCTGCACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068451.12 ENSMUST00000168403.2 |
||
| CDS-3UTR GCA 90 bp | TCCAGTGCAGATGCTTGTCTTTATGCATTGTTGGCAACCATGTCATGTTGTCAGTACTTATGCATGGACTaGAGAATGATCTCCTCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSADACLYALLATMSCCQYLCMD*RMISSR Trigger: CCTAGAGGAGATCATTCTGCAGTCCATGCATAAGTA...CTGACAACATGACATGGTTGCCAACAATGCATAAAGACAAGCATCTGCACTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068451.12 ENSMUST00000168403.2 |
||
| CDS-3UTR GCA 90 bp | GCTACATTTGTACCTGCTTTGTGTGCCATGATTTTCCCAAGGTGCAAAATAGAACGGGGGTTGTACTTATaGATGGACTGCAGAATGATC | + |
|
Preference number: 4 (lower is better) Translates to: ATFVPALCAMIFPRCKIERGLYL*MDCRMI Trigger: GATCATTCTGCAGTCCATGCATAAGTACAACCCCCG...TTCTATTTTGCACCTTGGGAAAATCATGGCACACAAAGCAGGTACAAATGTAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000068451.12 |
||
| CDS-3UTR GCA 90 bp | AAACACTGGGAACCACCCATCTCTTCACAGCTTGGGAGCTTTAAAGAAGTGTCTAAAAGGATAACTGATTaGTTCTTGGGCAATGGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: KHWEPPISSQLGSFKEVSKRITD*FLGNGV Trigger: AACGCCATTGCCCAAGAAGCAATCAGTTATCCTTTT...AGACACTTCTTTAAAGCTCCCAAGCTGTGAAGAGATGGGTGGTTCCCAGTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
||
| CDS-3UTR GCA 90 bp | CAGTGCAGATGCTTGTCTTTATGCATTGTTGGCAACCATGTCATGTTGTCAGCATACTTATGCATGGACTaGAGAATGATATGGCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QCRCLSLCIVGNHVMLSAYLCMD*RMIWPL Trigger: CAAGGGCCATATCATTCTGCAGTCCATGCATAAGTA...TGCTGACAACATGACATGGTTGCCAACAATGCATAAAGACAAGCATCTGCACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168174.9 |
||
| CDS-3UTR CCA 90 bp | TCAAGTGCTCTTTGCATCCCTCCAGTATTAAATATTATTCATGCTACACAGGTTCCTGGAGGATACCACTaGGACTTCCATCATGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSALCIPPVLNIIHATQVPGGYH*DFHHEW Trigger: CCACTCATGATGGAAGTCCCAGTGGTATCCTCCAGG...AACCTGTGTAGCATGAATAATATTTAATACTGGAGGGATGCAAAGAGCACTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
||
| CDS-3UTR CCA 90 bp | CATCCCTTGCTTAGACTAAGAGTTCATTCCTTTTCCCAACAAAAACATACTTCACCTGGAGGATACCACTaGGACTTCCATCATGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HPLLRLRVHSFSQQKHTSPGGYH*DFHHEW Trigger: CCACTCATGATGGAAGTCCCAGTGGTATCCTCCAGG...TGAAGTATGTTTTTGTTGGGAAAAGGAATGAACTCTTAGTCTAAGCAAGGGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
||
| CDS-3UTR CCA 90 bp | GCATTTCAACCAAACACAAAGATGCGATACATTTTCCCGAACATCTGCTCACCATTGGGCAATGGCGTTTaGATGGAAAATGTTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AFQPNTKMRYIFPNICSPLGNGV*MENVSR Trigger: CCTGGAAACATTTTCCATCCAAACGCCATTGCCCAA...TGGTGAGCAGATGTTCGGGAAAATGTATCGCATCTTTGTGTTTGGTTGAAATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 |
||
| CDS-3UTR CCA 90 bp | GAGAACTCATACTTTAAAACACTGGGAACCACCCATCTCTTCACAGCTTGGGAGGTAATGGTTAATGGCTaGATACCAATGGGAATGATC | + |
|
Preference number: 4 (lower is better) Translates to: ENSYFKTLGTTHLFTAWEVMVNG*IPMGMI Trigger: GATCATTCCCATTGGTATCCAGCCATTAACCATTAC...CTCCCAAGCTGTGAAGAGATGGGTGGTTCCCAGTGTTTTAAAGTATGAGTTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
||
| CDS-3UTR CCA 90 bp | CATACCTATAGCGTTTGGAATCCACCGGTACCACGTCCAAAATCACATAGTACTCTGCATCTCCTCTCTTaGGTCTTGAGCTTTTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: HTYSVWNPPVPRPKSHSTLHLLS*VLSFSF Trigger: AAAAGAAAAGCTCAAGACCCAAGAGAGGAGATGCAG...AGTACTATGTGATTTTGGACGTGGTACCGGTGGATTCCAAACGCTATAGGTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172682.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTTTCCTTTTGGTCTTAGGAAATTGCATACCTATAGCGTTTaGAATCCACCGGTACCACGT | + |
|
Preference number: 4 (lower is better) Translates to: SLSLSLSLFLFPFGLRKLHTYSV*NPPVPR Trigger: ACGTGGTACCGGTGGATTCCAAACGCTATAGGTATG...CAATTTCCTAAGACCAAAAGGAAAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
||
| CDS-3UTR TCA 90 bp | GTATATGCATTTCAACCAAACACAAAGATGCGATACATTTTCCCGAACATCTGCAGCAGAAGGGTATGTTaGCACTGTGCAGGTATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VYAFQPNTKMRYIFPNICSRRVC*HCAGMH Trigger: ATGCATACCTGCACAGTGTCAACATACCCTTCTGCT...GCAGATGTTCGGGAAAATGTATCGCATCTTTGTGTTTGGTTGAAATGCATATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 |
||
| CDS-3UTR TCA 90 bp | AATGTCCAGTGCAGATGCTTGTCTTTATGCATTGTTGGCAACCATGTCATGTTGGATGAAAAGGATAACTaGTTGCTTCTTGGGCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: NVQCRCLSLCIVGNHVMLDEKDN*LLLGQW Trigger: CCATTGCCCAAGAAGCAATCAGTTATCCTTTTCATC...CAACATGACATGGTTGCCAACAATGCATAAAGACAAGCATCTGCACTGGACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
||
| CDS-3UTR TCA 90 bp | TTCCATAATGTCCAGTGCAGATGCTTGTCTTTATGCATTGTTGGCAACCATGTCGATGAAAAGGATAACTaGTTGCTTCTTGGGCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: FHNVQCRCLSLCIVGNHVDEKDN*LLLGQW Trigger: CCATTGCCCAAGAAGCAATCAGTTATCCTTTTCATC...GACATGGTTGCCAACAATGCATAAAGACAAGCATCTGCACTGGACATTATGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
||
| CDS-3UTR TCA 90 bp | TCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTTTCCTTTTGGTCTTAGGAAATTGCCATTTTCACTGAGGTaGCTGGCAACATTTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SLSLSLSLFLFPFGLRKLPFSLR*LATFSS Trigger: ACTGGAAAATGTTGCCAGTCACCTCAGTGAAAATGG...CAATTTCCTAAGACCAAAAGGAAAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
||
| CDS-3UTR GCA 90 bp | TCAAGTGCTCTTTGCATCCCTCCAGTATTAAATATTATTCATGCTACACAGGTTCTGGAGATGAGCCACTaGTTCCACTTTGTGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSALCIPPVLNIIHATQVLEMSH*FHFVCL Trigger: CAGACACACAAAGTGGAAGCAGTGGCTCATCTCCAG...AACCTGTGTAGCATGAATAATATTTAATACTGGAGGGATGCAAAGAGCACTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
||
| CDS-3UTR GCA 90 bp | ATAATGTCCAGTGCAGATGCTTGTCTTTATGCATTGTTGGCAACCATGTCATGTGATGCTTGTAGACACTaGCCATTGCAGTCTTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: IMSSADACLYALLATMSCDACRH*PLQSSC Trigger: ACATGAAGACTGCAATGGGCAGTGTCTACAAGCATC...ACATGACATGGTTGCCAACAATGCATAAAGACAAGCATCTGCACTGGACATTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
||
| CDS-3UTR GCA 90 bp | TCCAGTGCAGATGCTTGTCTTTATGCATTGTTGGCAACCATGTCATGTTGTCAGAAAAGGATAACTGATTaGTTCTTGGGCAATGGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSADACLYALLATMSCCQKRITD*FLGNGV Trigger: AACGCCATTGCCCAAGAAGCAATCAGTTATCCTTTT...CTGACAACATGACATGGTTGCCAACAATGCATAAAGACAAGCATCTGCACTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
||
| CDS-3UTR GCA 90 bp | CAGTGCAGATGCTTGTCTTTATGCATTGTTGGCAACCATGTCATGTTGTCAGCAAGAATCTGGGAGTTATaGACGAATGGTCAGTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: QCRCLSLCIVGNHVMLSARIWEL*TNGQYF Trigger: GAAATACTGACCATTCGTGCATAACTCCCAGATTCT...TGCTGACAACATGACATGGTTGCCAACAATGCATAAAGACAAGCATCTGCACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168174.9 |
||
| CDS-3UTR CCA 90 bp | CCAGTGCAGATGCTTGTCTTTATGCATTGTTGGCAACCATGTCATGTTGTCAGCTATGTAAACCATAGGTaGAGAACAAGATGGAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PVQMLVFMHCWQPCHVVSYVNHR*RTRWRK Trigger: CTTTCTCCATCTTGTTCTCCACCTATGGTTTACATA...GCTGACAACATGACATGGTTGCCAACAATGCATAAAGACAAGCATCTGCACTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
||
| CDS-3UTR CCA 90 bp | ATACATTTTCCCGAACATCTGCTCACCATAATGTATGTTTACAGATTAATGTGCCCTGGAGGATACCACTaGGACTTCCATCATGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: IHFPEHLLTIMYVYRLMCPGGYH*DFHHEW Trigger: CCACTCATGATGGAAGTCCCAGTGGTATCCTCCAGG...GCACATTAATCTGTAAACATACATTATGGTGAGCAGATGTTCGGGAAAATGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 |
||
| CDS-3UTR CCA 90 bp | AATGTCCAGTGCAGATGCTTGTCTTTATGCATTGTTGGCAACCATGTCATGTTGGCAATGGCGTTTGGATaGAAAATGTTTCCAGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: NVQCRCLSLCIVGNHVMLAMAFG*KMFPGF Trigger: GAATCCTGGAAACATTTTCCATCCAAACGCCATTGC...CAACATGACATGGTTGCCAACAATGCATAAAGACAAGCATCTGCACTGGACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
||
| CDS-3UTR CCA 90 bp | TCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTTTCCTTTTGGTCTTAGGAAATTGTTGGGCAATGGCGTTTaGATGGAAAATGTTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLSLSLSLFLFPFGLRKLLGNGV*MENVSR Trigger: CCTGGAAACATTTTCCATCCAAACGCCATTGCCCAA...CAATTTCCTAAGACCAAAAGGAAAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
||
| CDS-3UTR TCA 90 bp | TCAAGTGCTCTTTGCATCCCTCCAGTATTAAATATTATTCATGCTACACAGGTTAGTGGGGGTAAGGTCTaGGGAATGATGAAACTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSALCIPPVLNIIHATQVSGGKV*GMMKLG Trigger: ACCAAGTTTCATCATTCCTCAGACCTTACCCCCACT...AACCTGTGTAGCATGAATAATATTTAATACTGGAGGGATGCAAAGAGCACTTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
||
| CDS-3UTR TCA 90 bp | TCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTTTCCTTTTGGTCTTAGGAAATTGGATGAAAAGGATAACTaGTTGCTTCTTGGGCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: SLSLSLSLFLFPFGLRKLDEKDN*LLLGQW Trigger: CCATTGCCCAAGAAGCAATCAGTTATCCTTTTCATC...CAATTTCCTAAGACCAAAAGGAAAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
||
| CDS-3UTR TCA 90 bp | TTCAAGTGCTCTTTGCATCCCTCCAGTATTAAATATTATTCATGCTACACAGGTTTGAAGATTCTGCCTTaGGTCGCTTTTCGGGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FKCSLHPSSIKYYSCYTGLKILP*VAFRAV Trigger: AACAGCCCGAAAAGCGACTCAAGGCAGAATCTTCAA...ACCTGTGTAGCATGAATAATATTTAATACTGGAGGGATGCAAAGAGCACTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
||
| CDS-3UTR TCA 90 bp | TATCTAGTGAGCAAATTTTCAGTACAGCATCTCTCTTTAGGAGTGGGAGAAAAATTGAAGATTCTGCCTTaGGTCGCTTTTCGGGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: YLVSKFSVQHLSLGVGEKLKILP*VAFRAV Trigger: AACAGCCCGAAAAGCGACTCAAGGCAGAATCTTCAA...TTTTTCTCCCACTCCTAAAGAGAGATGCTGTACTGAAAATTTGCTCACTAGATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000168174.9 |
||
| CDS-3UTR TCA 90 bp | TCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTTTCCTTTTGGTCTTAGGAAATTGGGAGAAAACAGTTTTTaGAGATTCTGCCTTGAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: SLSLSLSLFLFPFGLRKLGENSF*RFCLES Trigger: CGACTCAAGGCAGAATCTTCAAAAACTGTTTTCTCC...CAATTTCCTAAGACCAAAAGGAAAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
||
| CDS-3UTR TCA 90 bp | TCAAGTGCTCTTTGCATCCCTCCAGTATTAAATATTATTCATGCTACACAGGTTCCATCCCTTTCACCTTaGTCCGAACAGAAGGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: SSALCIPPVLNIIHATQVPSLSP*SEQKET Trigger: TGTTTCCTTCTGTTCGGATCAAGGTGAAAGGGATGG...AACCTGTGTAGCATGAATAATATTTAATACTGGAGGGATGCAAAGAGCACTTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
||
| CDS-3UTR TCA 90 bp | TTCAAGTGCTCTTTGCATCCCTCCAGTATTAAATATTATTCATGCTACACAGGTAGCTACCATCCACTGTaGGCTGTGATACACATACCT | + |
|
Preference number: 4 (lower is better) Translates to: FKCSLHPSSIKYYSCYTGSYHPL*AVIHIP Trigger: AGGTATGTGTATCACAGCTCACAGTGGATGGTAGCT...ACCTGTGTAGCATGAATAATATTTAATACTGGAGGGATGCAAAGAGCACTTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
||
| CDS-3UTR CCA 90 bp | CCAGTGCAGATGCTTGTCTTTATGCATTGTTGGCAACCATGTCATGTTGTCAGCTCGCCAATTATTAGTTaGACAAATTCTGTAGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PVQMLVFMHCWQPCHVVSSPIIS*TNSVAE Trigger: TTCTGCTACAGAATTTGTCCAACTAATAATTGGCGA...GCTGACAACATGACATGGTTGCCAACAATGCATAAAGACAAGCATCTGCACTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
||
| CDS-3UTR CCA 90 bp | TCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTTTCCTTTTGGTCTTAGGAAATTGGCAATGGCGTTTGGATaGAAAATGTTTCCAGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: SLSLSLSLFLFPFGLRKLAMAFG*KMFPGF Trigger: GAATCCTGGAAACATTTTCCATCCAAACGCCATTGC...CAATTTCCTAAGACCAAAAGGAAAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
||
| CDS-3UTR CCA 90 bp | GCTACATTTGTACCTGCTTTGTGTGCCATGATTTTCCCAAGGTGCAAAATAGAAGCAATGGCGTTTGGATaGAAAATGTTTCCAGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: ATFVPALCAMIFPRCKIEAMAFG*KMFPGF Trigger: GAATCCTGGAAACATTTTCCATCCAAACGCCATTGC...TTCTATTTTGCACCTTGGGAAAATCATGGCACACAAAGCAGGTACAAATGTAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 |
||
| CDS-3UTR CCA 90 bp | TTCCATAATGTCCAGTGCAGATGCTTGTCTTTATGCATTGTTGGCAACCATGTCGTAATGGTTAATGGCTaGATACCAATGGGAATGATC | + |
|
Preference number: 4 (lower is better) Translates to: FHNVQCRCLSLCIVGNHVVMVNG*IPMGMI Trigger: GATCATTCCCATTGGTATCCAGCCATTAACCATTAC...GACATGGTTGCCAACAATGCATAAAGACAAGCATCTGCACTGGACATTATGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
||
| CDS-3UTR CCA 90 bp | AATGTCCAGTGCAGATGCTTGTCTTTATGCATTGTTGGCAACCATGTCATGTTGGTAATGGTTAATGGCTaGATACCAATGGGAATGATC | + |
|
Preference number: 4 (lower is better) Translates to: NVQCRCLSLCIVGNHVMLVMVNG*IPMGMI Trigger: GATCATTCCCATTGGTATCCAGCCATTAACCATTAC...CAACATGACATGGTTGCCAACAATGCATAAAGACAAGCATCTGCACTGGACATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
||
| CDS-3UTR CCA 90 bp | TCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTTTCCTTTTGGTCTTAGGAAATTGCTGCATCTCCTCTCTTaGGTCTTGAGCTTTTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLSLSLSLFLFPFGLRKLLHLLS*VLSFSF Trigger: AAAAGAAAAGCTCAAGACCCAAGAGAGGAGATGCAG...CAATTTCCTAAGACCAAAAGGAAAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
||
| CDS-3UTR CCA 90 bp | TTCAAGTGCTCTTTGCATCCCTCCAGTATTAAATATTATTCATGCTACACAGGTCATACCTATAGCGTTTaGAATCCACCGGTACCACGT | + |
|
Preference number: 4 (lower is better) Translates to: FKCSLHPSSIKYYSCYTGHTYSV*NPPVPR Trigger: ACGTGGTACCGGTGGATTCCAAACGCTATAGGTATG...ACCTGTGTAGCATGAATAATATTTAATACTGGAGGGATGCAAAGAGCACTTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
||
| CDS-3UTR TCA 90 bp | TTCAAGTGCTCTTTGCATCCCTCCAGTATTAAATATTATTCATGCTACACAGGTCCATTTTCACTGAGGTaGCTGGCAACATTTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FKCSLHPSSIKYYSCYTGPFSLR*LATFSS Trigger: ACTGGAAAATGTTGCCAGTCACCTCAGTGAAAATGG...ACCTGTGTAGCATGAATAATATTTAATACTGGAGGGATGCAAAGAGCACTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
||
| CDS-3UTR TCA 90 bp | ATACATTTTCCCGAACATCTGCTCACCATAATGTATGTTTACAGATTAATGTGCCCATCCCTTTCACCTTaGTCCGAACAGAAGGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: IHFPEHLLTIMYVYRLMCPSLSP*SEQKET Trigger: TGTTTCCTTCTGTTCGGATCAAGGTGAAAGGGATGG...GCACATTAATCTGTAAACATACATTATGGTGAGCAGATGTTCGGGAAAATGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168174.9 |
||
| CDS-3UTR TCA 90 bp | ATACATTTTCCCGAACATCTGCTCACCATAATGTATGTTTACAGATTAATGTGCAGCTACCATCCACTGTaGGCTGTGATACACATACCT | + |
|
Preference number: 4 (lower is better) Translates to: IHFPEHLLTIMYVYRLMCSYHPL*AVIHIP Trigger: AGGTATGTGTATCACAGCTCACAGTGGATGGTAGCT...GCACATTAATCTGTAAACATACATTATGGTGAGCAGATGTTCGGGAAAATGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168174.9 |
||
| CDS-3UTR GCA 90 bp | TTCAAGTGCTCTTTGCATCCCTCCAGTATTAAATATTATTCATGCTACACAGGTGATGCTTGTAGACACTaGCCATTGCAGTCTTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: FKCSLHPSSIKYYSCYTGDACRH*PLQSSC Trigger: ACATGAAGACTGCAATGGGCAGTGTCTACAAGCATC...ACCTGTGTAGCATGAATAATATTTAATACTGGAGGGATGCAAAGAGCACTTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
||
| CDS-3UTR GCA 90 bp | TTCAAGTGCTCTTTGCATCCCTCCAGTATTAAATATTATTCATGCTACACAGGTCGGGGGTTGTACTTATaGATGGACTGCAGAATGATA | + |
|
Preference number: 4 (lower is better) Translates to: FKCSLHPSSIKYYSCYTGRGLYL*MDCRMI Trigger: TATCATTCTGCAGTCCATGCATAAGTACAACCCCCG...ACCTGTGTAGCATGAATAATATTTAATACTGGAGGGATGCAAAGAGCACTTGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
||
| CDS-3UTR CCA 90 bp | TTGAATCATCCCTTGCTTAGACTAAGAGTTCATTCCTTTTCCCAACAAAAACATGTGCAGGTATGCATCTaGATAGGTCATCCCAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LNHPLLRLRVHSFSQQKHVQVCI*IGHPKG Trigger: TCCTTTGGGATGACCTATCCAGATGCATACCTGCAC...ATGTTTTTGTTGGGAAAAGGAATGAACTCTTAGTCTAAGCAAGGGATGATTCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
||
| CDS-3UTR CCA 90 bp | TCAAGTGCTCTTTGCATCCCTCCAGTATTAAATATTATTCATGCTACACAGGTTATTTTCCAGTCTAGGTaGCATGGAGATGGTGTACCT | + |
|
Preference number: 4 (lower is better) Translates to: SSALCIPPVLNIIHATQVIFQSR*HGDGVP Trigger: AGGTACACCATCTCCATGCCACCTAGACTGGAAAAT...AACCTGTGTAGCATGAATAATATTTAATACTGGAGGGATGCAAAGAGCACTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
||
| CDS-3UTR CCA 90 bp | AGTGTCTTCATTTTCGAAGCACAATGTAAATGTCTTAAATGTGGATGTTGTCCCATTTTCCAGTCTAGGTaGCATGGAGATGGTGTACCT | + |
|
Preference number: 4 (lower is better) Translates to: SVFIFEAQCKCLKCGCCPIFQSR*HGDGVP Trigger: AGGTACACCATCTCCATGCCACCTAGACTGGAAAAT...GGGACAACATCCACATTTAAGACATTTACATTGTGCTTCGAAAATGAAGACACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068451.12 ENSMUST00000168403.2 |
||
| CDS-3UTR CCA 90 bp | TCAAGTGCTCTTTGCATCCCTCCAGTATTAAATATTATTCATGCTACACAGGTTGGTGGACATAGAATCTaGGAGTTATGCACGAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSALCIPPVLNIIHATQVGGHRI*ELCTNG Trigger: ACCATTCGTGCATAACTCCCAGATTCTATGTCCACC...AACCTGTGTAGCATGAATAATATTTAATACTGGAGGGATGCAAAGAGCACTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
||
| CDS-3UTR CCA 90 bp | TATCTAGTGAGCAAATTTTCAGTACAGCATCTCTCTTTAGGAGTGGGAGAAAAAGGTGGACATAGAATCTaGGAGTTATGCACGAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: YLVSKFSVQHLSLGVGEKGGHRI*ELCTNG Trigger: ACCATTCGTGCATAACTCCCAGATTCTATGTCCACC...TTTTTCTCCCACTCCTAAAGAGAGATGCTGTACTGAAAATTTGCTCACTAGATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168174.9 |
||
| CDS-3UTR CCA 90 bp | TCAAGTGCTCTTTGCATCCCTCCAGTATTAAATATTATTCATGCTACACAGGTTGACTGCAGAATGATATaGCCCTTGTCATCCATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSALCIPPVLNIIHATQVDCRMI*PLSSIS Trigger: TGAGATGGATGACAAGGGCCATATCATTCTGCAGTC...AACCTGTGTAGCATGAATAATATTTAATACTGGAGGGATGCAAAGAGCACTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
||
| 3UTR CAA 72 bp | CAGCACATAAGACACTGCTGGTTCAAAGATTATCCATaGAATCATCCCTTGCTTAGACTAAGAGTTCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: QHIRHCWFKDYP*NHPLLRLRVHS Trigger: GGAATGAACTCTTAGTCTAAGCAAGGGATGATTCAATGGATAATCTTTGAACCAGCAGTGTCTTATGTGCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
||
| 3UTR CAA 72 bp | TGCTTGTCTTTATGCATTGTTGGCAACCATGTCATGTaGTCAGCACATAAGACACTGCTGGTTCAAAGATTA | + |
|
Preference number: 4 (lower is better) Translates to: CLSLCIVGNHVM*SAHKTLLVQRL Trigger: TAATCTTTGAACCAGCAGTGTCTTATGTGCTGACAACATGACATGGTTGCCAACAATGCATAAAGACAAGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
||
| 3UTR CAA 72 bp | TTAAGAAGACTCTTCCATAATGTCCAGTGCAGATGCTaGTCTTTATGCATTGTTGGCAACCATGTCATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LRRLFHNVQCRC*SLCIVGNHVML Trigger: CAACATGACATGGTTGCCAACAATGCATAAAGACAAGCATCTGCACTGGACATTATGGAAGAGTCTTCTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
||
| CDS-3UTR TCA 90 bp | CATCCCTTGCTTAGACTAAGAGTTCATTCCTTTTCCCAACAAAAACATACTTCAGATGAAAAGGATAACTaGTTGCTTCTTGGGCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: HPLLRLRVHSFSQQKHTSDEKDN*LLLGQW Trigger: CCATTGCCCAAGAAGCAATCAGTTATCCTTTTCATC...TGAAGTATGTTTTTGTTGGGAAAAGGAATGAACTCTTAGTCTAAGCAAGGGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
||
| CDS-3UTR TCA 90 bp | ATACATTTTCCCGAACATCTGCTCACCATAATGTATGTTTACAGATTAATGTGCCCATTTTCACTGAGGTaGCTGGCAACATTTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: IHFPEHLLTIMYVYRLMCPFSLR*LATFSS Trigger: ACTGGAAAATGTTGCCAGTCACCTCAGTGAAAATGG...GCACATTAATCTGTAAACATACATTATGGTGAGCAGATGTTCGGGAAAATGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 |
||
| CDS-3UTR TCA 90 bp | TTCAAGTGCTCTTTGCATCCCTCCAGTATTAAATATTATTCATGCTACACAGGTCCATCTCATTGTTGGTaGGTTTCACTCGATCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: FKCSLHPSSIKYYSCYTGPSHCW*VSLDQK Trigger: CTTTTGATCGAGTGAAACTCACCAACAATGAGATGG...ACCTGTGTAGCATGAATAATATTTAATACTGGAGGGATGCAAAGAGCACTTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
||
| CDS-3UTR GCA 90 bp | TCAAGTGCTCTTTGCATCCCTCCAGTATTAAATATTATTCATGCTACACAGGTTTACTTATGCATGGACTaGAGAATGATATGGCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSALCIPPVLNIIHATQVYLCMD*RMIWPL Trigger: CAAGGGCCATATCATTCTGCAGTCCATGCATAAGTA...AACCTGTGTAGCATGAATAATATTTAATACTGGAGGGATGCAAAGAGCACTTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
||
| CDS-3UTR GCA 90 bp | TGTGAGCCAATAAAGTTGTATATGCATTTCAACCAAACACAAAGATGCGATACACGGGGGTTGTACTTATaGATGGACTGCAGAATGATA | + |
|
Preference number: 4 (lower is better) Translates to: CEPIKLYMHFNQTQRCDTRGLYL*MDCRMI Trigger: TATCATTCTGCAGTCCATGCATAAGTACAACCCCCG...TGTATCGCATCTTTGTGTTTGGTTGAAATGCATATACAACTTTATTGGCTCACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168174.9 |
||
| CDS-3UTR CCA 90 bp | CATCCCTTGCTTAGACTAAGAGTTCATTCCTTTTCCCAACAAAAACATACTTCAGCAATGGCGTTTGGATaGAAAATGTTTCCAGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: HPLLRLRVHSFSQQKHTSAMAFG*KMFPGF Trigger: GAATCCTGGAAACATTTTCCATCCAAACGCCATTGC...TGAAGTATGTTTTTGTTGGGAAAAGGAATGAACTCTTAGTCTAAGCAAGGGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
||
| CDS-3UTR CCA 90 bp | TTGAATCATCCCTTGCTTAGACTAAGAGTTCATTCCTTTTCCCAACAAAAACATATTTTCCAGTCTAGGTaGCATGGAGATGGTGTACCT | + |
|
Preference number: 4 (lower is better) Translates to: LNHPLLRLRVHSFSQQKHIFQSR*HGDGVP Trigger: AGGTACACCATCTCCATGCCACCTAGACTGGAAAAT...ATGTTTTTGTTGGGAAAAGGAATGAACTCTTAGTCTAAGCAAGGGATGATTCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
||
| CDS-3UTR GCA 90 bp | TTCAAGTGCTCTTTGCATCCCTCCAGTATTAAATATTATTCATGCTACACAGGTAAAAGGATAACTGATTaGTTCTTGGGCAATGGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: FKCSLHPSSIKYYSCYTGKRITD*FLGNGV Trigger: AACGCCATTGCCCAAGAAGCAATCAGTTATCCTTTT...ACCTGTGTAGCATGAATAATATTTAATACTGGAGGGATGCAAAGAGCACTTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
||
| CDS-3UTR GCA 90 bp | TCAAGTGCTCTTTGCATCCCTCCAGTATTAAATATTATTCATGCTACACAGGTTAGAATCTGGGAGTTATaGACGAATGGTCAGTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSALCIPPVLNIIHATQVRIWEL*TNGQYF Trigger: GAAATACTGACCATTCGTGCATAACTCCCAGATTCT...AACCTGTGTAGCATGAATAATATTTAATACTGGAGGGATGCAAAGAGCACTTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
||
| CDS-3UTR CCA 90 bp | TTCAAGTGCTCTTTGCATCCCTCCAGTATTAAATATTATTCATGCTACACAGGTGTAATGGTTAATGGCTaGATACCAATGGGAATGATC | + |
|
Preference number: 4 (lower is better) Translates to: FKCSLHPSSIKYYSCYTGVMVNG*IPMGMI Trigger: GATCATTCCCATTGGTATCCAGCCATTAACCATTAC...ACCTGTGTAGCATGAATAATATTTAATACTGGAGGGATGCAAAGAGCACTTGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
||
| CDS-3UTR GCA 90 bp | TGTGAGCCAATAAAGTTGTATATGCATTTCAACCAAACACAAAGATGCGATACAAAAAGGATAACTGATTaGTTCTTGGGCAATGGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: CEPIKLYMHFNQTQRCDTKRITD*FLGNGV Trigger: AACGCCATTGCCCAAGAAGCAATCAGTTATCCTTTT...TGTATCGCATCTTTGTGTTTGGTTGAAATGCATATACAACTTTATTGGCTCACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 |
||
| CDS-3UTR CCA 90 bp | TCAAGTGCTCTTTGCATCCCTCCAGTATTAAATATTATTCATGCTACACAGGTTTATGTAAACCATAGGTaGAGAACAAGATGGAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSALCIPPVLNIIHATQVYVNHR*RTRWRK Trigger: CTTTCTCCATCTTGTTCTCCACCTATGGTTTACATA...AACCTGTGTAGCATGAATAATATTTAATACTGGAGGGATGCAAAGAGCACTTGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
||
| CDS-3UTR CCA 90 bp | CATCCCTTGCTTAGACTAAGAGTTCATTCCTTTTCCCAACAAAAACATACTTCATATGTAAACCATAGGTaGAGAACAAGATGGAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: HPLLRLRVHSFSQQKHTSYVNHR*RTRWRK Trigger: CTTTCTCCATCTTGTTCTCCACCTATGGTTTACATA...TGAAGTATGTTTTTGTTGGGAAAAGGAATGAACTCTTAGTCTAAGCAAGGGATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
||
| CDS-3UTR CCA 90 bp | ATACATTTTCCCGAACATCTGCTCACCATAATGTATGTTTACAGATTAATGTGCTATGTAAACCATAGGTaGAGAACAAGATGGAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: IHFPEHLLTIMYVYRLMCYVNHR*RTRWRK Trigger: CTTTCTCCATCTTGTTCTCCACCTATGGTTTACATA...GCACATTAATCTGTAAACATACATTATGGTGAGCAGATGTTCGGGAAAATGTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 |
||
| CDS-3UTR CCA 90 bp | TTCAAGTGCTCTTTGCATCCCTCCAGTATTAAATATTATTCATGCTACACAGGTTCGCCAATTATTAGTTaGACAAATTCTGTAGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FKCSLHPSSIKYYSCYTGSPIIS*TNSVAE Trigger: TTCTGCTACAGAATTTGTCCAACTAATAATTGGCGA...ACCTGTGTAGCATGAATAATATTTAATACTGGAGGGATGCAAAGAGCACTTGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
||
| CDS-3UTR CCA 90 bp | TGTGAGCCAATAAAGTTGTATATGCATTTCAACCAAACACAAAGATGCGATACATCGCCAATTATTAGTTaGACAAATTCTGTAGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CEPIKLYMHFNQTQRCDTSPIIS*TNSVAE Trigger: TTCTGCTACAGAATTTGTCCAACTAATAATTGGCGA...TGTATCGCATCTTTGTGTTTGGTTGAAATGCATATACAACTTTATTGGCTCACA 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 |
||
| CDS-3UTR CCA 90 bp | TTGAATCATCCCTTGCTTAGACTAAGAGTTCATTCCTTTTCCCAACAAAAACATTCGCCAATTATTAGTTaGACAAATTCTGTAGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LNHPLLRLRVHSFSQQKHSPIIS*TNSVAE Trigger: TTCTGCTACAGAATTTGTCCAACTAATAATTGGCGA...ATGTTTTTGTTGGGAAAAGGAATGAACTCTTAGTCTAAGCAAGGGATGATTCAA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
||
| CDS TCA 90 bp | CTGGAGGATACCACTGGGACTTCCATCATGAGTGGGGGTAAGGTCTaGGGAATGATGAAACTTGGTAGCCTTTCAGGAGTAGGTAAAACA | + |
|
Preference number: 5 (lower is better) Translates to: LEDTTGTSIMSGGKV*GMMKLGSLSGVGKT Trigger: TGTTTTACCTACTCCTGAAAGGCTACCAAGTTTCATCATTCCTCAGACCTTACCCCCACTCATGATGGAAGTCCCAGTGGTATCCTCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068451.12 ENSMUST00000118986.8 ENSMUST00000168174.9 ENSMUST00000168403.2 |
||
| CDS-3UTR CAA 90 bp | TCCAGTGCAGATGCTTGTCTTTATGCATTGTTGGCAACCATGTCATGTTGTCAGACATGCACACGGGGGTaGTACTTATGCATGGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSADACLYALLATMSCCQTCTRG*YLCMDC Trigger: GCAGTCCATGCATAAGTACAACCCCCGTGTGCATGT...CTGACAACATGACATGGTTGCCAACAATGCATAAAGACAAGCATCTGCACTGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
||
| CDS-3UTR CAA 90 bp | ATAGCGTTTGGAATCCACCGGTACCACGTCCAAAATCACATAGTACTGCTTCACCTCCTCTCTTGGGTCTaGAGCTTTTCTTTTGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: IAFGIHRYHVQNHIVLLHLLSWV*SFSFAG Trigger: CCCAGCAAAAGAAAAGCTCAAGACCCAAGAGAGGAG...GTGAAGCAGTACTATGTGATTTTGGACGTGGTACCGGTGGATTCCAAACGCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000172682.8 |
||
| CDS TCA 90 bp | ATCTCAGTGCCAATGTCGTGGAATCTCTTCCATAGGTCAGATCCCTaGAGCTCCACTTGGATAACACTTTCTTCTTGCAGACTTTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ISVPMSWNLFHRSDP*SSTWITLSSCRLSW Trigger: CCAGGAAAGTCTGCAAGAAGAAAGTGTTATCCAAGTGGAGCTTCAGGGATCTGACCTATGGAAGAGATTCCACGACATTGGCACTGAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
||
| CDS-3UTR CAA 90 bp | AATGTCCAGTGCAGATGCTTGTCTTTATGCATTGTTGGCAACCATGTCATGTTGACATGCACACGGGGGTaGTACTTATGCATGGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: NVQCRCLSLCIVGNHVMLTCTRG*YLCMDC Trigger: GCAGTCCATGCATAAGTACAACCCCCGTGTGCATGT...CAACATGACATGGTTGCCAACAATGCATAAAGACAAGCATCTGCACTGGACATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
||
| CDS-3UTR CAA 90 bp | CCAGTGCAGATGCTTGTCTTTATGCATTGTTGGCAACCATGTCATGTTGTCAGCTGTAGACACTGCCCATaGCAGTCTTCATGTAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PVQMLVFMHCWQPCHVVSCRHCP*QSSCKP Trigger: TGGCTTACATGAAGACTGCAATGGGCAGTGTCTACA...GCTGACAACATGACATGGTTGCCAACAATGCATAAAGACAAGCATCTGCACTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
||
| CDS-3UTR CAA 90 bp | CCAGTGCAGATGCTTGTCTTTATGCATTGTTGGCAACCATGTCATGTTGTCAGCTCCATCCCTTTCACCTaGATCCGAACAGAAGGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: PVQMLVFMHCWQPCHVVSSIPFT*IRTEGN Trigger: GTTTCCTTCTGTTCGGATCAAGGTGAAAGGGATGGA...GCTGACAACATGACATGGTTGCCAACAATGCATAAAGACAAGCATCTGCACTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168174.9 |
||
| CDS CCA 90 bp | GGTACCATTTTCACTGAGGTGACTGGCAACATTTTCCAGTCTAGGTaGCATGGAGATGGTGTACCTATAACAGCCATTAGGAGGATGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GTIFTEVTGNIFQSR*HGDGVPITAIRRMK Trigger: TTTCATCCTCCTAATGGCTGTTATAGGTACACCATCTCCATGCCACCTAGACTGGAAAATGTTGCCAGTCACCTCAGTGAAAATGGTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068451.12 ENSMUST00000118986.8 ENSMUST00000168174.9 ENSMUST00000168403.2 |
||
| CDS-3UTR CAA 90 bp | TCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTTTCCTTTTGGTCTTAGGAAATTGACATGCACACGGGGGTaGTACTTATGCATGGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: SLSLSLSLFLFPFGLRKLTCTRG*YLCMDC Trigger: GCAGTCCATGCATAAGTACAACCCCCGTGTGCATGT...CAATTTCCTAAGACCAAAAGGAAAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
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| CDS-3UTR CAA 90 bp | AGACTCTTCCATAATGTCCAGTGCAGATGCTTGTCTTTATGCATTGTTGGCAACAAGCCACTGTTTGGATaGATGATGCCCCTGGAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: RLFHNVQCRCLSLCIVGNKPLFG*MMPLED Trigger: ATCCTCCAGGGGCATCATCAATCCAAACAGTGGCTT...GTTGCCAACAATGCATAAAGACAAGCATCTGCACTGGACATTATGGAAGAGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
||
| CDS-3UTR CAA 90 bp | CCAGTGCAGATGCTTGTCTTTATGCATTGTTGGCAACCATGTCATGTTGTCAGCGGATCTCTAAATCCTTaGGCAAAAGGATTCCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PVQMLVFMHCWQPCHVVSGSLNP*AKGFLS Trigger: AGACAGGAATCCTTTTGCCAAAGGATTTAGAGATCC...GCTGACAACATGACATGGTTGCCAACAATGCATAAAGACAAGCATCTGCACTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
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| CDS-3UTR CAA 90 bp | GCTACATTTGTACCTGCTTTGTGTGCCATGATTTTCCCAAGGTGCAAAATAGAAAAGCCACTGTTTGGATaGATGATGCCCCTGGAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: ATFVPALCAMIFPRCKIEKPLFG*MMPLED Trigger: ATCCTCCAGGGGCATCATCAATCCAAACAGTGGCTT...TTCTATTTTGCACCTTGGGAAAATCATGGCACACAAAGCAGGTACAAATGTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 |
||
| CDS-3UTR CAA 90 bp | TTCCATAATGTCCAGTGCAGATGCTTGTCTTTATGCATTGTTGGCAACCATGTCTGTAGACACTGCCCATaGCAGTCTTCATGTAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FHNVQCRCLSLCIVGNHVCRHCP*QSSCKP Trigger: TGGCTTACATGAAGACTGCAATGGGCAGTGTCTACA...GACATGGTTGCCAACAATGCATAAAGACAAGCATCTGCACTGGACATTATGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
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| CDS-3UTR CAA 90 bp | TCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTTTCCTTTTGGTCTTAGGAAATTGCTCCTCTCTTGGGTCTaGAGCTTTTCTTTTGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SLSLSLSLFLFPFGLRKLLLSWV*SFSFAG Trigger: CCCAGCAAAAGAAAAGCTCAAGACCCAAGAGAGGAG...CAATTTCCTAAGACCAAAAGGAAAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
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| CDS-3UTR CAA 90 bp | CAGTGCAGATGCTTGTCTTTATGCATTGTTGGCAACCATGTCATGTTGTCAGCATCCCTGAAGCTCCACTaGGATAACACTTTCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QCRCLSLCIVGNHVMLSASLKLH*DNTFFL Trigger: CAAGAAGAAAGTGTTATCCAAGTGGAGCTTCAGGGA...TGCTGACAACATGACATGGTTGCCAACAATGCATAAAGACAAGCATCTGCACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168174.9 |
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| CDS-3UTR CAA 90 bp | CCAGTGCAGATGCTTGTCTTTATGCATTGTTGGCAACCATGTCATGTTGTCAGCAGAATGATATGGCCCTaGTCATCCATCTCATTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PVQMLVFMHCWQPCHVVSRMIWP*SSISLL Trigger: CAACAATGAGATGGATGACAAGGGCCATATCATTCT...GCTGACAACATGACATGGTTGCCAACAATGCATAAAGACAAGCATCTGCACTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168174.9 |
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| CDS-3UTR CAA 90 bp | CAGTGCAGATGCTTGTCTTTATGCATTGTTGGCAACCATGTCATGTTGTCAGCAGATAACACTTTCTTCTaGCAGACTTTCCTGGCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: QCRCLSLCIVGNHVMLSADNTFF*QTFLAV Trigger: AACAGCCAGGAAAGTCTGCAAGAAGAAAGTGTTATC...TGCTGACAACATGACATGGTTGCCAACAATGCATAAAGACAAGCATCTGCACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168174.9 |
||
| CDS-3UTR CAA 90 bp | TTGAATCATCCCTTGCTTAGACTAAGAGTTCATTCCTTTTCCCAACAAAAACATACATGCACACGGGGGTaGTACTTATGCATGGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: LNHPLLRLRVHSFSQQKHTCTRG*YLCMDC Trigger: GCAGTCCATGCATAAGTACAACCCCCGTGTGCATGT...ATGTTTTTGTTGGGAAAAGGAATGAACTCTTAGTCTAAGCAAGGGATGATTCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
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| CDS-3UTR CAA 90 bp | TCAAGTGCTCTTTGCATCCCTCCAGTATTAAATATTATTCATGCTACACAGGTTAAGCCACTGTTTGGATaGATGATGCCCCTGGAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SSALCIPPVLNIIHATQVKPLFG*MMPLED Trigger: ATCCTCCAGGGGCATCATCAATCCAAACAGTGGCTT...AACCTGTGTAGCATGAATAATATTTAATACTGGAGGGATGCAAAGAGCACTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
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| CDS-3UTR CAA 90 bp | TCAAGTGCTCTTTGCATCCCTCCAGTATTAAATATTATTCATGCTACACAGGTTCTCCTCTCTTGGGTCTaGAGCTTTTCTTTTGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SSALCIPPVLNIIHATQVLLSWV*SFSFAG Trigger: CCCAGCAAAAGAAAAGCTCAAGACCCAAGAGAGGAG...AACCTGTGTAGCATGAATAATATTTAATACTGGAGGGATGCAAAGAGCACTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
||
| CDS-3UTR CAA 90 bp | TTTCAGCTACATTCTGGCTCAGCCAGAAAACTGACTGGCACATCAGTAATATTTGGATCTCTAAATCCTTaGGCAAAAGGATTCCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: FQLHSGSARKLTGTSVIFGSLNP*AKGFLS Trigger: AGACAGGAATCCTTTTGCCAAAGGATTTAGAGATCC...AAATATTACTGATGTGCCAGTCAGTTTTCTGGCTGAGCCAGAATGTAGCTGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 |
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| CDS-3UTR CAA 90 bp | TTGAATCATCCCTTGCTTAGACTAAGAGTTCATTCCTTTTCCCAACAAAAACATAAGCCACTGTTTGGATaGATGATGCCCCTGGAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LNHPLLRLRVHSFSQQKHKPLFG*MMPLED Trigger: ATCCTCCAGGGGCATCATCAATCCAAACAGTGGCTT...ATGTTTTTGTTGGGAAAAGGAATGAACTCTTAGTCTAAGCAAGGGATGATTCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 ENSMUST00000168403.2 |
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| CDS-3UTR CAA 90 bp | TCAAGTGCTCTTTGCATCCCTCCAGTATTAAATATTATTCATGCTACACAGGTTTGTAGACACTGCCCATaGCAGTCTTCATGTAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SSALCIPPVLNIIHATQVCRHCP*QSSCKP Trigger: TGGCTTACATGAAGACTGCAATGGGCAGTGTCTACA...AACCTGTGTAGCATGAATAATATTTAATACTGGAGGGATGCAAAGAGCACTTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
||
| CDS-3UTR CAA 90 bp | TTCAAGTGCTCTTTGCATCCCTCCAGTATTAAATATTATTCATGCTACACAGGTTCCATCCCTTTCACCTaGATCCGAACAGAAGGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: FKCSLHPSSIKYYSCYTGSIPFT*IRTEGN Trigger: GTTTCCTTCTGTTCGGATCAAGGTGAAAGGGATGGA...ACCTGTGTAGCATGAATAATATTTAATACTGGAGGGATGCAAAGAGCACTTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
||
| CDS-3UTR CAA 90 bp | TCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTTTCCTTTTGGTCTTAGGAAATTGAGAATGATATGGCCCTaGTCATCCATCTCATTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLSLSLSLFLFPFGLRKLRMIWP*SSISLL Trigger: CAACAATGAGATGGATGACAAGGGCCATATCATTCT...CAATTTCCTAAGACCAAAAGGAAAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
||
| CDS-3UTR CAA 90 bp | ATACATTTTCCCGAACATCTGCTCACCATAATGTATGTTTACAGATTAATGTGCTGTAGACACTGCCCATaGCAGTCTTCATGTAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: IHFPEHLLTIMYVYRLMCCRHCP*QSSCKP Trigger: TGGCTTACATGAAGACTGCAATGGGCAGTGTCTACA...GCACATTAATCTGTAAACATACATTATGGTGAGCAGATGTTCGGGAAAATGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 |
||
| CDS-3UTR CAA 90 bp | TCAAGTGCTCTTTGCATCCCTCCAGTATTAAATATTATTCATGCTACACAGGTTTCCCTGAAGCTCCACTaGGATAACACTTTCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSALCIPPVLNIIHATQVSLKLH*DNTFFL Trigger: CAAGAAGAAAGTGTTATCCAAGTGGAGCTTCAGGGA...AACCTGTGTAGCATGAATAATATTTAATACTGGAGGGATGCAAAGAGCACTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
||
| CDS-3UTR CAA 90 bp | GTATATGCATTTCAACCAAACACAAAGATGCGATACATTTTCCCGAACATCTGCTCATCCATCTCATTGTaGGTGAGTTTCACTCGATCA | + |
|
Preference number: 5 (lower is better) Translates to: VYAFQPNTKMRYIFPNICSSISL*VSFTRS Trigger: TGATCGAGTGAAACTCACCAACAATGAGATGGATGA...GCAGATGTTCGGGAAAATGTATCGCATCTTTGTGTTTGGTTGAAATGCATATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168174.9 |
||
| CDS CCA 90 bp | GATGGAAAATGTTTCCAGGATTCTGTAATCCATATAACATTTGATTaGCAGAATGAGATGCTTGTAGACACTGCCCATTGCAGTCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: DGKCFQDSVIHITFD*QNEMLVDTAHCSLH Trigger: ATGAAGACTGCAATGGGCAGTGTCTACAAGCATCTCATTCTGCCAATCAAATGTTATATGGATTACAGAATCCTGGAAACATTTTCCATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068451.12 ENSMUST00000118986.8 ENSMUST00000168174.9 ENSMUST00000168403.2 |
||
| CDS-3UTR CAA 90 bp | TATCTAGTGAGCAAATTTTCAGTACAGCATCTCTCTTTAGGAGTGGGAGAAAAAGGATCTCTAAATCCTTaGGCAAAAGGATTCCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: YLVSKFSVQHLSLGVGEKGSLNP*AKGFLS Trigger: AGACAGGAATCCTTTTGCCAAAGGATTTAGAGATCC...TTTTTCTCCCACTCCTAAAGAGAGATGCTGTACTGAAAATTTGCTCACTAGATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 |
||
| CDS-3UTR CAA 90 bp | TTCAAGTGCTCTTTGCATCCCTCCAGTATTAAATATTATTCATGCTACACAGGTGGATCTCTAAATCCTTaGGCAAAAGGATTCCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: FKCSLHPSSIKYYSCYTGGSLNP*AKGFLS Trigger: AGACAGGAATCCTTTTGCCAAAGGATTTAGAGATCC...ACCTGTGTAGCATGAATAATATTTAATACTGGAGGGATGCAAAGAGCACTTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
||
| CDS-3UTR CAA 90 bp | TTCAAGTGCTCTTTGCATCCCTCCAGTATTAAATATTATTCATGCTACACAGGTGATAACACTTTCTTCTaGCAGACTTTCCTGGCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: FKCSLHPSSIKYYSCYTGDNTFF*QTFLAV Trigger: AACAGCCAGGAAAGTCTGCAAGAAGAAAGTGTTATC...ACCTGTGTAGCATGAATAATATTTAATACTGGAGGGATGCAAAGAGCACTTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
||
| CDS-3UTR CAA 90 bp | TTCAAGTGCTCTTTGCATCCCTCCAGTATTAAATATTATTCATGCTACACAGGTTCATCCATCTCATTGTaGGTGAGTTTCACTCGATCA | + |
|
Preference number: 5 (lower is better) Translates to: FKCSLHPSSIKYYSCYTGSSISL*VSFTRS Trigger: TGATCGAGTGAAACTCACCAACAATGAGATGGATGA...ACCTGTGTAGCATGAATAATATTTAATACTGGAGGGATGCAAAGAGCACTTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
||
| CDS-3UTR CAA 90 bp | TCAAGTGCTCTTTGCATCCCTCCAGTATTAAATATTATTCATGCTACACAGGTTTTGTCATCCATCTCATaGTTGGTGAGTTTCACTCGA | + |
|
Preference number: 5 (lower is better) Translates to: SSALCIPPVLNIIHATQVLSSIS*LVSFTR Trigger: TCGAGTGAAACTCACCAACAATGAGATGGATGACAA...AACCTGTGTAGCATGAATAATATTTAATACTGGAGGGATGCAAAGAGCACTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
||
| CDS-3UTR CAA 90 bp | TATCTAGTGAGCAAATTTTCAGTACAGCATCTCTCTTTAGGAGTGGGAGAAAAACTGTCTATTTTCAGTTaGGTAATCTGCTGGTTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: YLVSKFSVQHLSLGVGEKLSIFS*VICWFW Trigger: CCAAAACCAGCAGATTACCAAACTGAAAATAGACAG...TTTTTCTCCCACTCCTAAAGAGAGATGCTGTACTGAAAATTTGCTCACTAGATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000068451.12 ENSMUST00000168174.9 |
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| CDS TCA 72 bp | AGGAGAGGGAGCTCCTCCACTAGAGGTCACTGGAGATaGGCCACTGCTTCCACTTTGTGTGTCTGTGACAAA | + |
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Preference number: 6 (lower is better) Translates to: RRGSSSTRGHWR*ATASTLCVCDK Trigger: TTTGTCACAGACACACAAAGTGGAAGCAGTGGCTCATCTCCAGTGACCTCTAGTGGAGGAGCTCCCTCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068451.12 ENSMUST00000118986.8 ENSMUST00000168174.9 ENSMUST00000168403.2 |
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| CDS TCA 72 bp | CTTGATCCGAACAGAAGGAAACATACGTCGGGCTGTTaGCTGTCCCTAGAAGGGCTCCTCAGTATCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: LDPNRRKHTSGC*LSLEGLLSISS Trigger: GGAGGAGATACTGAGGAGCCCTTCTAGGGACAGTCAACAGCCCGACGTATGTTTCCTTCTGTTCGGATCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172682.8 |
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| CDS TCA 72 bp | TTTGAAGATTCTGCCTTGAGTCGCTTTTCGGGCTGTTaGCTGTCCCTAGAAGGGCTCCTCAGTATCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: FEDSALSRFSGC*LSLEGLLSISS Trigger: GGAGGAGATACTGAGGAGCCCTTCTAGGGACAGTCAACAGCCCGAAAAGCGACTCAAGGCAGAATCTTCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
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| CDS TCA 72 bp | CATAGTACTGCTTCACAGGGTCCATCCCTTTCACCTTaGTCCGAACAGAAGGAAACATACGTCTGCCCGCCT | + |
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Preference number: 6 (lower is better) Translates to: HSTASQGPSLSP*SEQKETYVCPP Trigger: AGGCGGGCAGACGTATGTTTCCTTCTGTTCGGATCAAGGTGAAAGGGATGGACCCTGTGAAGCAGTACTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
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| CDS TCA 72 bp | ACCACTGGGACTTCCATCATGAGTGGGGGTAAGGTCTaGGGAATGATGAAACTTGGTAGCCTTTCAGGAGTA | + |
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Preference number: 6 (lower is better) Translates to: TTGTSIMSGGKV*GMMKLGSLSGV Trigger: TACTCCTGAAAGGCTACCAAGTTTCATCATTCCTCAGACCTTACCCCCACTCATGATGGAAGTCCCAGTGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000068451.12 ENSMUST00000118986.8 ENSMUST00000168174.9 ENSMUST00000168403.2 |
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| CDS GCA 72 bp | ACCACATGCACACGGGGGTTGTACTTATGCATGGACTaGAGAATGATATGGCCCTTGTCATCCATCTCATTG | + |
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Preference number: 6 (lower is better) Translates to: TTCTRGLYLCMD*RMIWPLSSISL Trigger: CAATGAGATGGATGACAAGGGCCATATCATTCTGCAGTCCATGCATAAGTACAACCCCCGTGTGCATGTGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
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| CDS CAA 72 bp | AGATCCCTGAAGCTCCACTTGGATAACACTTTCTTCTaGCAGACTTTCCTGGCTGTTGCTCTCGTCAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: RSLKLHLDNTFF*QTFLAVALVRA Trigger: TGCTCTGACGAGAGCAACAGCCAGGAAAGTCTGCAAGAAGAAAGTGTTATCCAAGTGGAGCTTCAGGGATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
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| CDS CCA 72 bp | TTCACTGAGGTGACTGGCAACATTTTCCAGTCTAGGTaGCATGGAGATGGTGTACCTATAACAGCCATTAGG | + |
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Preference number: 6 (lower is better) Translates to: FTEVTGNIFQSR*HGDGVPITAIR Trigger: CCTAATGGCTGTTATAGGTACACCATCTCCATGCCACCTAGACTGGAAAATGTTGCCAGTCACCTCAGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068451.12 ENSMUST00000118986.8 ENSMUST00000168174.9 ENSMUST00000168403.2 |
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| CDS CAA 90 bp | AGCTCCACTTGGATAACACTTTCTTCTTGCAGACTTTCCTGGCTGTaGCTCTCGTCAGAGCAGGAGAAAACAGTTTTTGAAGATTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: SSTWITLSSCRLSWL*LSSEQEKTVFEDSA Trigger: GGCAGAATCTTCAAAAACTGTTTTCTCCTGCTCTGACGAGAGCAACAGCCAGGAAAGTCTGCAAGAAGAAAGTGTTATCCAAGTGGAGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
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| CDS TCA 72 bp | CCAATGTCGTGGAATCTCTTCCATAGGTCAGATCCCTaGAGCTCCACTTGGATAACACTTTCTTCTTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: PMSWNLFHRSDP*SSTWITLSSCR Trigger: TCTGCAAGAAGAAAGTGTTATCCAAGTGGAGCTTCAGGGATCTGACCTATGGAAGAGATTCCACGACATTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118986.8 ENSMUST00000168174.9 |
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| CDS CAA 72 bp | GCCATTAGGAGGATGAAAAGGATAACTGATTGCTTCTaGGGCAATGGCGTTTGGATGGAAAATGTTTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: AIRRMKRITDCF*GNGVWMENVSR Trigger: CCTGGAAACATTTTCCATCCAAACGCCATTGCCCAAGAAGCAATCAGTTATCCTTTTCATCCTCCTAATGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068451.12 ENSMUST00000118986.8 ENSMUST00000168174.9 ENSMUST00000168403.2 |
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| CDS GCA 72 bp | ATAACAGCCATTAGGAGGATGAAAAGGATAACTGATTaGTTCTTGGGCAATGGCGTTTGGATGGAAAATGTT | + |
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Preference number: 6 (lower is better) Translates to: ITAIRRMKRITD*FLGNGVWMENV Trigger: AACATTTTCCATCCAAACGCCATTGCCCAAGAAGCAATCAGTTATCCTTTTCATCCTCCTAATGGCTGTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068451.12 ENSMUST00000118986.8 ENSMUST00000168174.9 ENSMUST00000168403.2 |
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| CDS CCA 72 bp | TGTTTCCAGGATTCTGTAATCCATATAACATTTGATTaGCAGAATGAGATGCTTGTAGACACTGCCCATTGC | + |
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Preference number: 6 (lower is better) Translates to: CFQDSVIHITFD*QNEMLVDTAHC Trigger: GCAATGGGCAGTGTCTACAAGCATCTCATTCTGCCAATCAAATGTTATATGGATTACAGAATCCTGGAAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068451.12 ENSMUST00000118986.8 ENSMUST00000168174.9 ENSMUST00000168403.2 |
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