Pregenerated sensors for TBX21 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001444Ensembl transcript IDs: ENSMUST00000001484.3
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGTGTGTGTACACACCGGTTCAAAGTGACCTCGCCTGGTGAAATGTaGACCCTTCAAACCCTTCCTCTGCACCCACCCTCTCTTGTCTCC | + |
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Preference number: 1 (lower is better) Translates to: RVCTHRFKVTSPGEM*TLQTLPLHPPSLVS Trigger: GGAGACAAGAGAGGGTGGGTGCAGAGGAAGGGTTTGAAGGGTGCACATTTCACCAGGCGAGGTCACTTTGAACCGGTGTGTACACACACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| 3UTR GCA 90 bp | TTCCTTGTGGGCCAGGAAACAAGAAGTAAACCCCAGAATCCTTCTTaGCCCGCTTCCTCTCCAACCAATCACTATACAGGGAAGGGATGG | + |
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Preference number: 1 (lower is better) Translates to: FLVGQETRSKPQNPS*PASSPTNHYTGKGW Trigger: CCATCCCTTCCCTGTATAGTGATTGGTTGGAGAGGAAGCGGGGCAAGAAGGATTCTGGGGTTTACTTCTTGTTTCCTGGCCCACAAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| 3UTR-3UTR CCA 90 bp | CTTCCTCTGCACCCACCCTCTCTTGTCTCCTCGCAGGTGGCCCAGTCCGCCCGCGGGTCCAAAACTCTCTaGAGTCCATTCTCCGTTCTC | + |
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Preference number: 2 (lower is better) Translates to: LPLHPPSLVSSQVAQSARGSKTL*SPFSVL Trigger: GAGAACGGAGAATGGACTCCAGAGAGTTTTGGACCC...GCGGGCGGACTGGGCCACCTGCGAGGAGACAAGAGAGGGTGGGTGCAGAGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| 3UTR-3UTR CCA 90 bp | GTGGCCCAGTCCGCCCGCAGTCACCTGAGTCTTCTCTGTTTGGCTGGCTGTTGTTATACAGGGAAGGGATaGGGAAGAGCTCGGGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: VAQSARSHLSLLCLAGCCYTGKG*GRARGS Trigger: AGAGCCCCGAGCTCTTCCCCATCCCTTCCCTGTATA...ACAACAGCCAGCCAAACAGAGAAGACTCAGGTGACTGCGGGCGGACTGGGCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| 3UTR CCA 72 bp | GCTTCCTCTCCAACCAATCACTATACAGGGAAGGGATaGGGAAGAGCTCGGGGCTCTCAGCCCCGCGTCTGT | + |
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Preference number: 3 (lower is better) Translates to: ASSPTNHYTGKG*GRARGSQPRVC Trigger: ACAGACGCGGGGCTGAGAGCCCCGAGCTCTTCCCCATCCCTTCCCTGTATAGTGATTGGTTGGAGAGGAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| 3UTR TCA 72 bp | TCTCCTCGCAGGTGGCCCAGTCCGCCCGCAGTCACCTaGGTCTTCTCTGTTTGGCTGGCTGTTGTAAAAATG | + |
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Preference number: 3 (lower is better) Translates to: SPRRWPSPPAVT*VFSVWLAVVKM Trigger: CATTTTTACAACAGCCAGCCAAACAGAGAAGACTCAGGTGACTGCGGGCGGACTGGGCCACCTGCGAGGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| 3UTR GCA 72 bp | ACACACCGGTTCAAAGTGACCTCGCCTGGTGAAATGTaGACCCTTCAAACCCTTCCTCTGCACCCACCCTCT | + |
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Preference number: 3 (lower is better) Translates to: THRFKVTSPGEM*TLQTLPLHPPS Trigger: AGAGGGTGGGTGCAGAGGAAGGGTTTGAAGGGTGCACATTTCACCAGGCGAGGTCACTTTGAACCGGTGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| 3UTR CCA 72 bp | GACCCCTCCACCTCGCAGAAAGCCATGAAGTCCCTCTaGGTCCAAAACTCTCTGGAGTCCATTCTCCGTTCT | + |
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Preference number: 3 (lower is better) Translates to: DPSTSQKAMKSL*VQNSLESILRS Trigger: AGAACGGAGAATGGACTCCAGAGAGTTTTGGACCCAGAGGGACTTCATGGCTTTCTGCGAGGTGGAGGGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| 3UTR TCA 72 bp | TGTGTGTACACACCGGTTCAAAGTGACCTCGCCTGGTaGAATGTGCACCCTTCAAACCCTTCCTCTGCACCC | + |
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Preference number: 3 (lower is better) Translates to: CVYTPVQSDLAW*NVHPSNPSSAP Trigger: GGGTGCAGAGGAAGGGTTTGAAGGGTGCACATTTCACCAGGCGAGGTCACTTTGAACCGGTGTGTACACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR TCA 90 bp | CTTCCTCTGCACCCACCCTCTCTTGTCTCCTCGCAGGTGGCCCAGTCCGCCCGCGGAGCCCTGTTCCTCTaGGGATCCCAGGCCCGGGTC | + |
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Preference number: 4 (lower is better) Translates to: LPLHPPSLVSSQVAQSARGALFL*GSQARV Trigger: GACCCGGGCCTGGGATCCTCAGAGGAACAGGGCTCC...GCGGGCGGACTGGGCCACCTGCGAGGAGACAAGAGAGGGTGGGTGCAGAGGAAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR CCA 90 bp | CAGGTTCGTGACTGTAGTTCGGGCAGAGAAAGGGGCAGGGGACACTCCTGTCGTTCGCTGGGCTCCGGCTaGAGGGAGGTGACCTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: QVRDCSSGRERGRGHSCRSLGSG*REVTSG Trigger: GCCTGAGGTCACCTCCCTCCAGCCGGAGCCCAGCGA...ACGACAGGAGTGTCCCCTGCCCCTTTCTCTGCCCGAACTACAGTCACGAACCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR TCA 90 bp | CAGGTTCGTGACTGTAGTTCGGGCAGAGAAAGGGGCAGGGGACACTCCTGTCGTCCAGCCCGGCCACGGTaGAGGACAGGAATGGGAACA | + |
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Preference number: 4 (lower is better) Translates to: QVRDCSSGRERGRGHSCRPARPR*RTGMGT Trigger: TGTTCCCATTCCTGTCCTTCACCGTGGCCGGGCTGG...ACGACAGGAGTGTCCCCTGCCCCTTTCTCTGCCCGAACTACAGTCACGAACCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR TCA 90 bp | CTTCCTCTGCACCCACCCTCTCTTGTCTCCTCGCAGGTGGCCCAGTCCGCCCGCCGATTTTCAGCTGAGTaGTCTCTGCGTTCTGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: LPLHPPSLVSSQVAQSARRFSAE*SLRSGR Trigger: CCTACCAGAACGCAGAGATCACTCAGCTGAAAATCG...GCGGGCGGACTGGGCCACCTGCGAGGAGACAAGAGAGGGTGGGTGCAGAGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR CCA 90 bp | CAGGTTCGTGACTGTAGTTCGGGCAGAGAAAGGGGCAGGGGACACTCCTGTCGTAGTGGGCTCCGGTGTTaGGGGAGTCTGGGTGGACAT | + |
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Preference number: 4 (lower is better) Translates to: QVRDCSSGRERGRGHSCRSGLRC*GSLGGH Trigger: ATGTCCACCCAGACTCCCCCAACACCGGAGCCCACT...ACGACAGGAGTGTCCCCTGCCCCTTTCTCTGCCCGAACTACAGTCACGAACCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR TCA 90 bp | CGTGACTGTAGTTCGGGCAGAGAAAGGGGCAGGGGACACTCCTGTCGTATTTCCTCTCCCCCAAGCAGTTaGCAGTTGGGTCCAGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: RDCSSGRERGRGHSCRISSPPSS*QLGPGG Trigger: GCCACCTGGACCCAACTGTCAACTGCTTGGGGGAGA...GGAAATACGACAGGAGTGTCCCCTGCCCCTTTCTCTGCCCGAACTACAGTCACG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR GCA 90 bp | AACCATGGGGTCAGAAGCAGCACCAGGTTCGTGACTGTAGTTCGGGCAGAGAAATCGGCATCGGCTCGGTaGCGGTCAGCATGTCTCCGC | + |
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Preference number: 4 (lower is better) Translates to: NHGVRSSTRFVTVVRAEKSASAR*RSACLR Trigger: GCGGAGACATGCTGACCGGCACCGAGCCGATGCCGA...TTTCTCTGCCCGAACTACAGTCACGAACCTGGTGCTGCTTCTGACCCCATGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR CCA 90 bp | CAGGTTCGTGACTGTAGTTCGGGCAGAGAAAGGGGCAGGGGACACTCCTGTCGTCGGGGCTGGTACTTGTaGAGAGACTGCAGGACGATC | + |
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Preference number: 4 (lower is better) Translates to: QVRDCSSGRERGRGHSCRRGWYL*RDCRTI Trigger: GATCGTCCTGCAGTCTCTCCACAAGTACCAGCCCCG...ACGACAGGAGTGTCCCCTGCCCCTTTCTCTGCCCGAACTACAGTCACGAACCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR TCA 90 bp | CTGGAGTCCATTCTCCGTTCTCCATGGAACCATGGGGTCAGAAGCAGCACCAGGACAACAGGTGGTTGCTaGGCGCGACTCTCAGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: LESILRSPWNHGVRSSTRTTGGC*ARLSAS Trigger: GGAAGCTGAGAGTCGCGCTCAGCAACCACCTGTTGT...CCTGGTGCTGCTTCTGACCCCATGGTTCCATGGAGAACGGAGAATGGACTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR CCA 90 bp | CCCGACCCCTCCACCTCGCAGAAAGCCATGAAGTCCCTCTGGGTCCAAAACTCTTTGGACCACAACAGGTaGTTGCTGAGCGCGACTCTC | + |
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Preference number: 4 (lower is better) Translates to: PDPSTSQKAMKSLWVQNSLDHNR*LLSATL Trigger: GAGAGTCGCGCTCAGCAACCACCTGTTGTGGTCCAA...AGAGTTTTGGACCCAGAGGGACTTCATGGCTTTCTGCGAGGTGGAGGGGTCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR TCA 90 bp | CCCGACCCCTCCACCTCGCAGAAAGCCATGAAGTCCCTCTGGGTCCAAAACTCTCTGTCTGGTGCTGGTTaGACTTGGACCACAACAGGT | + |
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Preference number: 4 (lower is better) Translates to: PDPSTSQKAMKSLWVQNSLSGAG*TWTTTG Trigger: ACCTGTTGTGGTCCAAGTTCAACCAGCACCAGACAG...AGAGTTTTGGACCCAGAGGGACTTCATGGCTTTCTGCGAGGTGGAGGGGTCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR GCA 90 bp | CTGGAGTCCATTCTCCGTTCTCCATGGAACCATGGGGTCAGAAGCAGCACCAGGTGGCATGCTGCCTTCTaGCTTTCCACACTGCACCCA | + |
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Preference number: 4 (lower is better) Translates to: LESILRSPWNHGVRSSTRWHAAF*LSTLHP Trigger: TGGGTGCAGTGTGGAAAGGCAGAAGGCAGCATGCCA...CCTGGTGCTGCTTCTGACCCCATGGTTCCATGGAGAACGGAGAATGGACTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR CCA 90 bp | AGGGGACACTCCTGTCGTATTTCCTTGTGGGCCAGGAAACAAGAAGTAAACCCCACCCACTTGCCGCTCTaGTACCGCCAGTGGTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: RGHSCRISLWARKQEVNPTHLPL*YRQWCW Trigger: CCAGCACCACTGGCGGTACCAGAGCGGCAAGTGGGT...GGGGTTTACTTCTTGTTTCCTGGCCCACAAGGAAATACGACAGGAGTGTCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR CCA 90 bp | CTCCAACCAATCACTATACAGGGAAGGGATGGGGAAGAGCTCGGGGCTCTCAGCCGGGGTAGAAACGGCTaGGAACAGGATACTGGTTGG | + |
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Preference number: 4 (lower is better) Translates to: LQPITIQGRDGEELGALSRGRNG*EQDTGW Trigger: CCAACCAGTATCCTGTTCCCAGCCGTTTCTACCCCG...GCTGAGAGCCCCGAGCTCTTCCCCATCCCTTCCCTGTATAGTGATTGGTTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR GCA 90 bp | AACCATGGGGTCAGAAGCAGCACCAGGTTCGTGACTGTAGTTCGGGCAGAGAAATGGTACCGCCAGTGGTaGTGGTCCACCAAGACCACA | + |
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Preference number: 4 (lower is better) Translates to: NHGVRSSTRFVTVVRAEKWYRQW*WSTKTT Trigger: TGTGGTCTTGGTGGACCAGCACCACTGGCGGTACCA...TTTCTCTGCCCGAACTACAGTCACGAACCTGGTGCTGCTTCTGACCCCATGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR CCA 90 bp | AGGGGACACTCCTGTCGTATTTCCTTGTGGGCCAGGAAACAAGAAGTAAACCCCCTCTGGTACCGCCAGTaGTGCTGGTCCACCAAGACC | + |
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Preference number: 4 (lower is better) Translates to: RGHSCRISLWARKQEVNPLWYRQ*CWSTKT Trigger: GGTCTTGGTGGACCAGCACCACTGGCGGTACCAGAG...GGGGTTTACTTCTTGTTTCCTGGCCCACAAGGAAATACGACAGGAGTGTCCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR CCA 90 bp | CTCCAACCAATCACTATACAGGGAAGGGATGGGGAAGAGCTCGGGGCTCTCAGCTTGGGGGAGTCTGGGTaGACATATAAGCGGTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: LQPITIQGRDGEELGALSLGESG*TYKRFP Trigger: AGGGAACCGCTTATATGTCCACCCAGACTCCCCCAA...GCTGAGAGCCCCGAGCTCTTCCCCATCCCTTCCCTGTATAGTGATTGGTTGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR CCA 90 bp | AAAGGGGCAGGGGACACTCCTGTCGTATTTCCTTGTGGGCCAGGAAACAAGAAGATGTGCAGCCGGGGCTaGTACTTGTGGAGAGACTGC | + |
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Preference number: 4 (lower is better) Translates to: KGAGDTPVVFPCGPGNKKMCSRG*YLWRDC Trigger: GCAGTCTCTCCACAAGTACCAGCCCCGGCTGCACAT...CTTCTTGTTTCCTGGCCCACAAGGAAATACGACAGGAGTGTCCCCTGCCCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR CCA 90 bp | ACTGTAGTTCGGGCAGAGAAAGGGGCAGGGGACACTCCTGTCGTATTTCCTTGTATCCTTGGGCTGGCCTaGAAGGTCGGGGTAGAAACG | + |
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Preference number: 4 (lower is better) Translates to: TVVRAEKGAGDTPVVFPCILGLA*KVGVET Trigger: CGTTTCTACCCCGACCTTCCAGGCCAGCCCAAGGAT...ACAAGGAAATACGACAGGAGTGTCCCCTGCCCCTTTCTCTGCCCGAACTACAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR TCA 90 bp | CCATGGGGTCAGAAGCAGCACCAGGTTCGTGACTGTAGTTCGGGCAGAGAAAGGCCCCCTTGTTGTTGGTaGGCTTTAGCTTCCCAAATG | + |
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Preference number: 4 (lower is better) Translates to: PWGQKQHQVRDCSSGRERPPCCW*ALASQM Trigger: CATTTGGGAAGCTAAAGCTCACCAACAACAAGGGGG...CCTTTCTCTGCCCGAACTACAGTCACGAACCTGGTGCTGCTTCTGACCCCATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR GCA 90 bp | CAGGTTCGTGACTGTAGTTCGGGCAGAGAAAGGGGCAGGGGACACTCCTGTCGTATCATCTCTGTCTGGTaGTGGTTGAACTTGGACCAC | + |
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Preference number: 4 (lower is better) Translates to: QVRDCSSGRERGRGHSCRIISVW*WLNLDH Trigger: GTGGTCCAAGTTCAACCAGCACCAGACAGAGATGAT...ACGACAGGAGTGTCCCCTGCCCCTTTCTCTGCCCGAACTACAGTCACGAACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR GCA 90 bp | TTGTGGGCCAGGAAACAAGAAGTAAACCCCAGAATCCTTCTTGCCCCGCTTCCTTCTGCCTTTCCACACTaGACCCACTTGCCGCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: LWARKQEVNPRILLAPLPSAFPH*THLPLW Trigger: CCAGAGCGGCAAGTGGGTGCAGTGTGGAAAGGCAGA...AGGAAGCGGGGCAAGAAGGATTCTGGGGTTTACTTCTTGTTTCCTGGCCCACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR GCA 90 bp | GGGACACTCCTGTCGTATTTCCTTGTGGGCCAGGAAACAAGAAGTAAACCCCAGGGAGTGTGGGCTTCATaGTCACAGCTCGGAACTCCG | + |
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Preference number: 4 (lower is better) Translates to: GTLLSYFLVGQETRSKPQGVWAS*SQLGTP Trigger: CGGAGTTCCGAGCTGTGAGCATGAAGCCCACACTCC...CTGGGGTTTACTTCTTGTTTCCTGGCCCACAAGGAAATACGACAGGAGTGTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR CCA 90 bp | AAAGGGGCAGGGGACACTCCTGTCGTATTTCCTTGTGGGCCAGGAAACAAGAAGCCAAATGAAACTTCCTaGCGCATCCAGTGGGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: KGAGDTPVVFPCGPGNKKPNETS*RIQWAP Trigger: CGGAGCCCACTGGATGCGCCAGGAAGTTTCATTTGG...CTTCTTGTTTCCTGGCCCACAAGGAAATACGACAGGAGTGTCCCCTGCCCCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR CCA 90 bp | AAAGGGGCAGGGGACACTCCTGTCGTATTTCCTTGTGGGCCAGGAAACAAGAAGGTGAGATCATATCCTTaGGCTGGCCTGGAAGGTCGG | + |
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Preference number: 4 (lower is better) Translates to: KGAGDTPVVFPCGPGNKKVRSYP*AGLEGR Trigger: CCGACCTTCCAGGCCAGCCCAAGGATATGATCTCAC...CTTCTTGTTTCCTGGCCCACAAGGAAATACGACAGGAGTGTCCCCTGCCCCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR CCA 90 bp | CCCCAGAATCCTTCTTGCCCCGCTTCCTCTCCAACCAATCACTATACAGGGAAGCAGAGGGTAGGAGTGTaGGCTTCATGCTCACAGCTC | + |
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Preference number: 4 (lower is better) Translates to: PQNPSCPASSPTNHYTGKQRVGV*ASCSQL Trigger: GAGCTGTGAGCATGAAGCCCACACTCCTACCCTCTG...CTTCCCTGTATAGTGATTGGTTGGAGAGGAAGCGGGGCAAGAAGGATTCTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR CCA 90 bp | TCCTGTCGTATTTCCTTGTGGGCCAGGAAACAAGAAGTAAACCCCAGAATCCTTGGTAGTAGGGCACAGTaGGCCCCGGGGCAGAGGGTA | + |
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Preference number: 4 (lower is better) Translates to: SCRISLWARKQEVNPRILGSRAQ*APGQRV Trigger: TACCCTCTGCCCCGGGGCCCACTGTGCCCTACTACC...AAGGATTCTGGGGTTTACTTCTTGTTTCCTGGCCCACAAGGAAATACGACAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR CCA 90 bp | CCCCAGAATCCTTCTTGCCCCGCTTCCTCTCCAACCAATCACTATACAGGGAAGAGGAGCTGTCGCCACTaGAAGGATAGGGGGATATCC | + |
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Preference number: 4 (lower is better) Translates to: PQNPSCPASSPTNHYTGKRSCRH*KDRGIS Trigger: GGATATCCCCCTATCCTTCCAGTGGCGACAGCTCCT...CTTCCCTGTATAGTGATTGGTTGGAGAGGAAGCGGGGCAAGAAGGATTCTGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR TCA 90 bp | TTCACTTTCAGGTCAGAGATTAACACAGGTGTCAGACCAACAGTTGAAAGTTACCCGGCTGGAGGGAGGTaGCCTCAGGCCACAGCGAGG | + |
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Preference number: 4 (lower is better) Translates to: FTFRSEINTGVRPTVESYPAGGR*PQATAR Trigger: CCTCGCTGTGGCCTGAGGTCACCTCCCTCCAGCCGG...GTAACTTTCAACTGTTGGTCTGACACCTGTGTTAATCTCTGACCTGAAAGTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR TCA 90 bp | AACCATGGGGTCAGAAGCAGCACCAGGTTCGTGACTGTAGTTCGGGCAGAGAAAAGGCAGTCACTGCAATaGACTGGGTCTCTTGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: NHGVRSSTRFVTVVRAEKRQSLQ*TGSLGK Trigger: CTTTCCAAGAGACCCAGTTCATTGCAGTGACTGCCT...TTTCTCTGCCCGAACTACAGTCACGAACCTGGTGCTGCTTCTGACCCCATGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR CCA 90 bp | AACCATGGGGTCAGAAGCAGCACCAGGTTCGTGACTGTAGTTCGGGCAGAGAAATCTGGGTCACATTGTTaGAAGCCCCCTTGTTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: NHGVRSSTRFVTVVRAEKSGSHC*KPPCCW Trigger: CCAACAACAAGGGGGCTTCCAACAATGTGACCCAGA...TTTCTCTGCCCGAACTACAGTCACGAACCTGGTGCTGCTTCTGACCCCATGGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR CCA 90 bp | CAAGAAGTAAACCCCAGAATCCTTCTTGCCCCGCTTCCTCTCCAACCAATCACTACTGCAGGCAGCCTCTaGCTCTCCATCATTCACCTC | + |
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Preference number: 4 (lower is better) Translates to: QEVNPRILLAPLPLQPITTAGSL*LSIIHL Trigger: GAGGTGAATGATGGAGAGCCAGAGGCTGCCTGCAGT...AGTGATTGGTTGGAGAGGAAGCGGGGCAAGAAGGATTCTGGGGTTTACTTCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR CCA 90 bp | CCCGACCCCTCCACCTCGCAGAAAGCCATGAAGTCCCTCTGGGTCCAAAACTCTGTCACTGCAATGAACTaGGTCTCTTGGAAAGTAAAG | + |
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Preference number: 4 (lower is better) Translates to: PDPSTSQKAMKSLWVQNSVTAMN*VSWKVK Trigger: CTTTACTTTCCAAGAGACCCAGTTCATTGCAGTGAC...AGAGTTTTGGACCCAGAGGGACTTCATGGCTTTCTGCGAGGTGGAGGGGTCGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR GCA 90 bp | CTGGAGTCCATTCTCCGTTCTCCATGGAACCATGGGGTCAGAAGCAGCACCAGGAACATTCGCCGTCCTTaGTTAGTGATGATCATCTCT | + |
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Preference number: 4 (lower is better) Translates to: LESILRSPWNHGVRSSTRNIRRP*LVMIIS Trigger: AGAGATGATCATCACTAAGCAAGGACGGCGAATGTT...CCTGGTGCTGCTTCTGACCCCATGGTTCCATGGAGAACGGAGAATGGACTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR CCA 90 bp | CTTCCTCTCCAACCAATCACTATACAGGGAAGGGATGGGGAAGAGCTCGGGGCTATGATCATCTCTGTCTaGTGCTGGTTGAACTTGGAC | + |
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Preference number: 4 (lower is better) Translates to: LPLQPITIQGRDGEELGAMIISV*CWLNLD Trigger: GTCCAAGTTCAACCAGCACCAGACAGAGATGATCAT...AGCCCCGAGCTCTTCCCCATCCCTTCCCTGTATAGTGATTGGTTGGAGAGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR TCA 90 bp | TTGTGGGCCAGGAAACAAGAAGTAAACCCCAGAATCCTTCTTGCCCCGCTTCCTTTGTCGATTTTCAGCTaGGTGATCTCTGCGTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: LWARKQEVNPRILLAPLPLSIFS*VISAFW Trigger: CCAGAACGCAGAGATCACTCAGCTGAAAATCGACAA...AGGAAGCGGGGCAAGAAGGATTCTGGGGTTTACTTCTTGTTTCCTGGCCCACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR CCA 90 bp | TTGTGGGCCAGGAAACAAGAAGTAAACCCCAGAATCCTTCTTGCCCCGCTTCCTATCTCTGTCTGGTGCTaGTTGAACTTGGACCACAAC | + |
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Preference number: 4 (lower is better) Translates to: LWARKQEVNPRILLAPLPISVWC*LNLDHN Trigger: GTTGTGGTCCAAGTTCAACCAGCACCAGACAGAGAT...AGGAAGCGGGGCAAGAAGGATTCTGGGGTTTACTTCTTGTTTCCTGGCCCACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR CCA 90 bp | TTCACTTTCAGGTCAGAGATTAACACAGGTGTCAGACCAACAGTTGAAAGTTACTCCTGTAATGGCTTGTaGGCTCCAGCCCGGCCACGG | + |
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Preference number: 4 (lower is better) Translates to: FTFRSEINTGVRPTVESYSCNGL*APARPR Trigger: CCGTGGCCGGGCTGGAGCCCACAAGCCATTACAGGA...GTAACTTTCAACTGTTGGTCTGACACCTGTGTTAATCTCTGACCTGAAAGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR CCA 90 bp | TTGTGGGCCAGGAAACAAGAAGTAAACCCCAGAATCCTTCTTGCCCCGCTTCCTCAACAGATGCGTACATaGACTCAAAGTTCTCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LWARKQEVNPRILLAPLPQQMRT*TQSSPG Trigger: TCCGGGAGAACTTTGAGTCCATGTACGCATCTGTTG...AGGAAGCGGGGCAAGAAGGATTCTGGGGTTTACTTCTTGTTTCCTGGCCCACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR CCA 90 bp | CCCCAGAATCCTTCTTGCCCCGCTTCCTCTCCAACCAATCACTATACAGGGAAGGAACAGGATACTGGTTaGATAGAAGAGGTGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PQNPSCPASSPTNHYTGKEQDTG*IEEVRR Trigger: CCTTCTCACCTCTTCTATCCAACCAGTATCCTGTTC...CTTCCCTGTATAGTGATTGGTTGGAGAGGAAGCGGGGCAAGAAGGATTCTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR CCA 90 bp | GGGACACTCCTGTCGTATTTCCTTGTGGGCCAGGAAACAAGAAGTAAACCCCAGCTGGGAACAGGATACTaGTTGGATAGAAGAGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GTLLSYFLVGQETRSKPQLGTGY*LDRRGE Trigger: CTCACCTCTTCTATCCAACCAGTATCCTGTTCCCAG...CTGGGGTTTACTTCTTGTTTCCTGGCCCACAAGGAAATACGACAGGAGTGTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR GCA 90 bp | TTCACTTTCAGGTCAGAGATTAACACAGGTGTCAGACCAACAGTTGAAAGTTACCACACTGCACCCACTTaGCGCTCTGGTACCGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FTFRSEINTGVRPTVESYHTAPT*RSGTAS Trigger: ACTGGCGGTACCAGAGCGGCAAGTGGGTGCAGTGTG...GTAACTTTCAACTGTTGGTCTGACACCTGTGTTAATCTCTGACCTGAAAGTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR CCA 90 bp | TCTGTTTGGCTGGCTGTTGTAAAAATGCGTGTATCTTCACTTTCAGGTCAGAGATACCGCCAGTGGTGCTaGTCCACCAAGACCACATCC | + |
|
Preference number: 4 (lower is better) Translates to: SVWLAVVKMRVSSLSGQRYRQWC*STKTTS Trigger: GGATGTGGTCTTGGTGGACCAGCACCACTGGCGGTA...TCTCTGACCTGAAAGTGAAGATACACGCATTTTTACAACAGCCAGCCAAACAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR CCA 90 bp | TTCACTTTCAGGTCAGAGATTAACACAGGTGTCAGACCAACAGTTGAAAGTTACACAGTTGGGTCCAGGTaGCGAGGGGACACTCGTATC | + |
|
Preference number: 4 (lower is better) Translates to: FTFRSEINTGVRPTVESYTVGSR*RGDTRI Trigger: GATACGAGTGTCCCCTCGCCACCTGGACCCAACTGT...GTAACTTTCAACTGTTGGTCTGACACCTGTGTTAATCTCTGACCTGAAAGTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR CCA 90 bp | TCTGTTTGGCTGGCTGTTGTAAAAATGCGTGTATCTTCACTTTCAGGTCAGAGAATGAACTGGGTCTCTTaGAAAGTAAAGACGTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SVWLAVVKMRVSSLSGQRMNWVS*KVKTCV Trigger: CACACACGTCTTTACTTTCCAAGAGACCCAGTTCAT...TCTCTGACCTGAAAGTGAAGATACACGCATTTTTACAACAGCCAGCCAAACAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS GCA 90 bp | GCGCGGCAGGCACCAGGGCGCCCCCAGAGTAGGGCGTCCCCAGGCTaGTACCTGCGCGGCGATCGGTCGGGTCCTGTGCGCCCGGCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: ARQAPGRPQSRASPG*YLRGDRSGPVRPAR Trigger: CCGAGCCGGGCGCACAGGACCCGACCGATCGCCGCGCAGGTAGCAGCCTGGGGACGCCCTACTCTGGGGGCGCCCTGGTGCCTGCCGCGC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS GCA 90 bp | AGGCACCAGGGCGCCCCCAGAGTAGGGCGTCCCCAGGCTGCTACCTaGGCGGCGATCGGTCGGGTCCTGTGCGCCCGGCTCGGGATAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RHQGAPRVGRPQAAT*AAIGRVLCARLGIE Trigger: TTCTATCCCGAGCCGGGCGCACAGGACCCGACCGATCGCCGCGCAGGTAGCAGCCTGGGGACGCCCTACTCTGGGGGCGCCCTGGTGCCT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS GCA 90 bp | GAGCGCGACTCTCAGCTTCCCAGACACCTCCAACCCCGCGGGCAATaGGTAGTCCTCGCGCGGCCCTGGGTAGAGCCCCGCGCGCGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: ERDSQLPRHLQPRGQ*VVLARPWVEPRARV Trigger: GACCCGCGCGCGGGGCTCTACCCAGGGCCGCGCGAGGACTACGCATTGCCCGCGGGGTTGGAGGTGTCTGGGAAGCTGAGAGTCGCGCTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS TCA 90 bp | CGCATGGGCCGGAACCAGCCAGCTGGGCTCATCTTGGGCGGGTATTaGGGGGCCACGGGCCAACCAGCTCCAGGCGCCAGGACGTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: RMGRNQPAGLILGGY*GATGQPAPGARTSW Trigger: CCAAGACGTCCTGGCGCCTGGAGCTGGTTGGCCCGTGGCCCCTCAATACCCGCCCAAGATGAGCCCAGCTGGCTGGTTCCGGCCCATGCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS TCA 90 bp | GGAGGTGACCTCAGGCCACAGCGAGGGGGAGGAGCCCTGTTCCTCTaGGGATCCCAGGCCCGGGTCCATGGGCAGAGTTCGCATGGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: GGDLRPQRGGGALFL*GSQARVHGQSSHGP Trigger: CGGCCCATGCGAACTCTGCCCATGGACCCGGGCCTGGGATCCTCAGAGGAACAGGGCTCCTCCCCCTCGCTGTGGCCTGAGGTCACCTCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS GCA 90 bp | GGGCGTCCCCAGGCTGCTACCTGCGCGGCGATCGGTCGGGTCCTGTaGGCCCGGCTCGGGATAGAAGAAACGATGCTGTTGGTCCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GRPQAATCAAIGRVL*ARLGIEETMLLVRS Trigger: GGAGCGGACCAACAGCATCGTTTCTTCTATCCCGAGCCGGGCGCACAGGACCCGACCGATCGCCGCGCAGGTAGCAGCCTGGGGACGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS CCA 90 bp | GCCCGGGTCCATGGGCAGAGTTCGCATGGGCCGGAACCAGCCAGCTaGGCTCATCTTGGGCGGGTATTGAGGGGCCACGGGCCAACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ARVHGQSSHGPEPAS*AHLGRVLRGHGPTS Trigger: GCTGGTTGGCCCGTGGCCCCTCAATACCCGCCCAAGATGAGCCCAGCTGGCTGGTTCCGGCCCATGCGAACTCTGCCCATGGACCCGGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS CCA 90 bp | TGGGCAGAGTTCGCATGGGCCGGAACCAGCCAGCTGGGCTCATCTTaGGCGGGTATTGAGGGGCCACGGGCCAACCAGCTCCAGGCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: WAEFAWAGTSQLGSS*AGIEGPRANQLQAP Trigger: TGGCGCCTGGAGCTGGTTGGCCCGTGGCCCCTCAATACCCGCCCAAGATGAGCCCAGCTGGCTGGTTCCGGCCCATGCGAACTCTGCCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS CCA 90 bp | CTCTTAGTGTCTCCTTCGCCTAGTCCTGAGTCGCTGGGCTCCGGCTaGAGGGAGGTGACCTCAGGCCACAGCGAGGGGGAGGAGCCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LLVSPSPSPESLGSG*REVTSGHSEGEEPC Trigger: ACAGGGCTCCTCCCCCTCGCTGTGGCCTGAGGTCACCTCCCTCCAGCCGGAGCCCAGCGACTCAGGACTAGGCGAAGGAGACACTAAGAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS CCA 90 bp | GTTCCTCTGAGGATCCCAGGCCCGGGTCCATGGGCAGAGTTCGCATaGGCCGGAACCAGCCAGCTGGGCTCATCTTGGGCGGGTATTGAG | + |
|
Preference number: 5 (lower is better) Translates to: VPLRIPGPGPWAEFA*AGTSQLGSSWAGIE Trigger: CTCAATACCCGCCCAAGATGAGCCCAGCTGGCTGGTTCCGGCCCATGCGAACTCTGCCCATGGACCCGGGCCTGGGATCCTCAGAGGAAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS GCA 90 bp | AGGGCACAGTGGGCCCCGGGGCAGAGGGTAGGAGTGTGGGCTTCATaGTCACAGCTCGGAACTCCGCTTCATAACTGTGTTCCCGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RAQWAPGQRVGVWAS*SQLGTPLHNCVPEV Trigger: CACCTCGGGAACACAGTTATGAAGCGGAGTTCCGAGCTGTGAGCATGAAGCCCACACTCCTACCCTCTGCCCCGGGGCCCACTGTGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS CCA 90 bp | CCCGGTAGTAGGGCACAGTGGGCCCCGGGGCAGAGGGTAGGAGTGTaGGCTTCATGCTCACAGCTCGGAACTCCGCTTCATAACTGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: PGSRAQWAPGQRVGV*ASCSQLGTPLHNCV Trigger: AACACAGTTATGAAGCGGAGTTCCGAGCTGTGAGCATGAAGCCCACACTCCTACCCTCTGCCCCGGGGCCCACTGTGCCCTACTACCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR CAA 90 bp | CTGGAGTCCATTCTCCGTTCTCCATGGAACCATGGGGTCAGAAGCAGCACCAGGAGCCGGGGCTGGTACTaGTGGAGAGACTGCAGGACG | + |
|
Preference number: 5 (lower is better) Translates to: LESILRSPWNHGVRSSTRSRGWY*WRDCRT Trigger: CGTCCTGCAGTCTCTCCACAAGTACCAGCCCCGGCT...CCTGGTGCTGCTTCTGACCCCATGGTTCCATGGAGAACGGAGAATGGACTCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR CAA 90 bp | AAAGGGGCAGGGGACACTCCTGTCGTATTTCCTTGTGGGCCAGGAAACAAGAAGCCACACTGCACCCACTaGCCGCTCTGGTACCGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KGAGDTPVVFPCGPGNKKPHCTH*PLWYRQ Trigger: CTGGCGGTACCAGAGCGGCAAGTGGGTGCAGTGTGG...CTTCTTGTTTCCTGGCCCACAAGGAAATACGACAGGAGTGTCCCCTGCCCCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS CCA 90 bp | GCCTCTGGCTCTCCATCATTCACCTCCACGATGTGCAGCCGGGGCTaGTACTTGTGGAGAGACTGCAGGACGATCATCTGGGTCACATTG | + |
|
Preference number: 5 (lower is better) Translates to: ASGSPSFTSTMCSRG*YLWRDCRTIIWVTL Trigger: CAATGTGACCCAGATGATCGTCCTGCAGTCTCTCCACAAGTACCAGCCCCGGCTGCACATCGTGGAGGTGAATGATGGAGAGCCAGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR CAA 90 bp | GGGACACTCCTGTCGTATTTCCTTGTGGGCCAGGAAACAAGAAGTAAACCCCAGCAGTGGGCTCCGGTGTaGGGGGAGTCTGGGTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: GTLLSYFLVGQETRSKPQQWAPV*GESGWT Trigger: TGTCCACCCAGACTCCCCCAACACCGGAGCCCACTG...CTGGGGTTTACTTCTTGTTTCCTGGCCCACAAGGAAATACGACAGGAGTGTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS TCA 90 bp | CGCTTCATAACTGTGTTCCCGAGGTGTCCCCAGCCAGTAAGGCTGTaGGATCATATCCTTGGGCTGGCCTGGAAGGTCGGGGTAGAAACG | + |
|
Preference number: 5 (lower is better) Translates to: RFITVFPRCPQPVRL*DHILGLAWKVGVET Trigger: CGTTTCTACCCCGACCTTCCAGGCCAGCCCAAGGATATGATCTCACAGCCTTACTGGCTGGGGACACCTCGGGAACACAGTTATGAAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR CAA 90 bp | CCCGACCCCTCCACCTCGCAGAAAGCCATGAAGTCCCTCTGGGTCCAAAACTCTGAAGCCCCCTTGTTGTaGGTGAGCTTTAGCTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PDPSTSQKAMKSLWVQNSEAPLL*VSFSFP Trigger: TGGGAAGCTAAAGCTCACCAACAACAAGGGGGCTTC...AGAGTTTTGGACCCAGAGGGACTTCATGGCTTTCTGCGAGGTGGAGGGGTCGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR CAA 90 bp | CTCCAACCAATCACTATACAGGGAAGGGATGGGGAAGAGCTCGGGGCTCTCAGCTGTGAGATCATATCCTaGGGCTGGCCTGGAAGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: LQPITIQGRDGEELGALSCEIIS*GWPGRS Trigger: CGACCTTCCAGGCCAGCCCAAGGATATGATCTCACA...GCTGAGAGCCCCGAGCTCTTCCCCATCCCTTCCCTGTATAGTGATTGGTTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS CCA 90 bp | ATGATCATCTCTGTCTGGTGCTGGTTGAACTTGGACCACAACAGGTaGTTGCTGAGCGCGACTCTCAGCTTCCCAGACACCTCCAACCCC | + |
|
Preference number: 5 (lower is better) Translates to: MIISVWCWLNLDHNR*LLSATLSFPDTSNP Trigger: GGGGTTGGAGGTGTCTGGGAAGCTGAGAGTCGCGCTCAGCAACCACCTGTTGTGGTCCAAGTTCAACCAGCACCAGACAGAGATGATCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR CAA 90 bp | TTGTGGGCCAGGAAACAAGAAGTAAACCCCAGAATCCTTCTTGCCCCGCTTCCTACATCCTGTAATGGCTaGTGGGCTCCAGCCCGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LWARKQEVNPRILLAPLPTSCNG*WAPARP Trigger: TGGCCGGGCTGGAGCCCACAAGCCATTACAGGATGT...AGGAAGCGGGGCAAGAAGGATTCTGGGGTTTACTTCTTGTTTCCTGGCCCACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR CAA 90 bp | CAGGTTCGTGACTGTAGTTCGGGCAGAGAAAGGGGCAGGGGACACTCCTGTCGTTTGGAAGCCCCCTTGTaGTTGGTGAGCTTTAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QVRDCSSGRERGRGHSCRLEAPL*LVSFSF Trigger: GAAGCTAAAGCTCACCAACAACAAGGGGGCTTCCAA...ACGACAGGAGTGTCCCCTGCCCCTTTCTCTGCCCGAACTACAGTCACGAACCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR CAA 90 bp | CAGGTTCGTGACTGTAGTTCGGGCAGAGAAAGGGGCAGGGGACACTCCTGTCGTATCATCTGGGTCACATaGTTGGAAGCCCCCTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: QVRDCSSGRERGRGHSCRIIWVT*LEAPLL Trigger: CAACAAGGGGGCTTCCAACAATGTGACCCAGATGAT...ACGACAGGAGTGTCCCCTGCCCCTTTCTCTGCCCGAACTACAGTCACGAACCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS CCA 90 bp | TTGGAAAGTAAAGACGTGTGTGTTAGAAGCACTGCAGGCAGCCTCTaGCTCTCCATCATTCACCTCCACGATGTGCAGCCGGGGCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LESKDVCVRSTAGSL*LSIIHLHDVQPGLV Trigger: TACCAGCCCCGGCTGCACATCGTGGAGGTGAATGATGGAGAGCCAGAGGCTGCCTGCAGTGCTTCTAACACACACGTCTTTACTTTCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS CCA 90 bp | AGATCATATCCTTGGGCTGGCCTGGAAGGTCGGGGTAGAAACGGCTaGGAACAGGATACTGGTTGGATAGAAGAGGTGAGAAGGGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RSYPWAGLEGRGRNG*EQDTGWIEEVRRGL Trigger: GAGACCCCTTCTCACCTCTTCTATCCAACCAGTATCCTGTTCCCAGCCGTTTCTACCCCGACCTTCCAGGCCAGCCCAAGGATATGATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR CAA 90 bp | CAAGAAGTAAACCCCAGAATCCTTCTTGCCCCGCTTCCTCTCCAACCAATCACTGTCTCCCCCAAGCAGTaGACAGTTGGGTCCAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: QEVNPRILLAPLPLQPITVSPKQ*TVGSRW Trigger: CCACCTGGACCCAACTGTCAACTGCTTGGGGGAGAC...AGTGATTGGTTGGAGAGGAAGCGGGGCAAGAAGGATTCTGGGGTTTACTTCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR CAA 90 bp | AACCATGGGGTCAGAAGCAGCACCAGGTTCGTGACTGTAGTTCGGGCAGAGAAATGGTGCTGGTTGAACTaGGACCACAACAGGTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: NHGVRSSTRFVTVVRAEKWCWLN*DHNRWL Trigger: CAACCACCTGTTGTGGTCCAAGTTCAACCAGCACCA...TTTCTCTGCCCGAACTACAGTCACGAACCTGGTGCTGCTTCTGACCCCATGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR CAA 90 bp | CGTGACTGTAGTTCGGGCAGAGAAAGGGGCAGGGGACACTCCTGTCGTATTTCCGAACATTCGCCGTCCTaGCTTAGTGATGATCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: RDCSSGRERGRGHSCRISEHSPS*LSDDHL Trigger: GAGATGATCATCACTAAGCAAGGACGGCGAATGTTC...GGAAATACGACAGGAGTGTCCCCTGCCCCTTTCTCTGCCCGAACTACAGTCACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR CAA 90 bp | TTGTGGGCCAGGAAACAAGAAGTAAACCCCAGAATCCTTCTTGCCCCGCTTCCTTCTGTCTGGTGCTGGTaGAACTTGGACCACAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: LWARKQEVNPRILLAPLPSVWCW*NLDHNR Trigger: CCTGTTGTGGTCCAAGTTCAACCAGCACCAGACAGA...AGGAAGCGGGGCAAGAAGGATTCTGGGGTTTACTTCTTGTTTCCTGGCCCACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR CAA 90 bp | ACTGTAGTTCGGGCAGAGAAAGGGGCAGGGGACACTCCTGTCGTATTTCCTTGTATCTGGGTCACATTGTaGGAAGCCCCCTTGTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: TVVRAEKGAGDTPVVFPCIWVTL*EAPLLL Trigger: CAACAACAAGGGGGCTTCCAACAATGTGACCCAGAT...ACAAGGAAATACGACAGGAGTGTCCCCTGCCCCTTTCTCTGCCCGAACTACAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR CAA 90 bp | TTGTGGGCCAGGAAACAAGAAGTAAACCCCAGAATCCTTCTTGCCCCGCTTCCTTTGTTGGAAGCCCCCTaGTTGTTGGTGAGCTTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: LWARKQEVNPRILLAPLPLLEAP*LLVSFS Trigger: GCTAAAGCTCACCAACAACAAGGGGGCTTCCAACAA...AGGAAGCGGGGCAAGAAGGATTCTGGGGTTTACTTCTTGTTTCCTGGCCCACAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR CAA 90 bp | AGGGGACACTCCTGTCGTATTTCCTTGTGGGCCAGGAAACAAGAAGTAAACCCCGGAACAGGATACTGGTaGGATAGAAGAGGTGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RGHSCRISLWARKQEVNPGTGYW*DRRGEK Trigger: CTTCTCACCTCTTCTATCCAACCAGTATCCTGTTCC...GGGGTTTACTTCTTGTTTCCTGGCCCACAAGGAAATACGACAGGAGTGTCCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS-3UTR CAA 90 bp | AGGGGACACTCCTGTCGTATTTCCTTGTGGGCCAGGAAACAAGAAGTAAACCCCAATGAACTGGGTCTCTaGGAAAGTAAAGACGTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: RGHSCRISLWARKQEVNPNELGL*ESKDVC Trigger: ACACACGTCTTTACTTTCCAAGAGACCCAGTTCATT...GGGGTTTACTTCTTGTTTCCTGGCCCACAAGGAAATACGACAGGAGTGTCCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS GCA 72 bp | CGGGCCCCCGGCCCTCGTCACTCGGCATCGGCTCGGTaGCGGTCAGCATGTCTCCGCAGCCCGGCTCCACGA | + |
|
Preference number: 6 (lower is better) Translates to: RAPGPRHSASAR*RSACLRSPAPR Trigger: TCGTGGAGCCGGGCTGCGGAGACATGCTGACCGGCACCGAGCCGATGCCGAGTGACGAGGGCCGGGGGCCCG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS CAA 90 bp | GGTCGGGTCCTGTGCGCCCGGCTCGGGATAGAAGAAACGATGCTGTaGGTCCGCTCCGGGCCCCCGGCCCTCGTCACTCGGCATCGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: GRVLCARLGIEETML*VRSGPPALVTRHRL Trigger: GAGCCGATGCCGAGTGACGAGGGCCGGGGGCCCGGAGCGGACCAACAGCATCGTTTCTTCTATCCCGAGCCGGGCGCACAGGACCCGACC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS GCA 72 bp | TCTCAGCTTCCCAGACACCTCCAACCCCGCGGGCAATaGGTAGTCCTCGCGCGGCCCTGGGTAGAGCCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: SQLPRHLQPRGQ*VVLARPWVEPR Trigger: GCGGGGCTCTACCCAGGGCCGCGCGAGGACTACGCATTGCCCGCGGGGTTGGAGGTGTCTGGGAAGCTGAGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS CAA 72 bp | CTGTGCGCCCGGCTCGGGATAGAAGAAACGATGCTGTaGGTCCGCTCCGGGCCCCCGGCCCTCGTCACTCGG | + |
|
Preference number: 6 (lower is better) Translates to: LCARLGIEETML*VRSGPPALVTR Trigger: CCGAGTGACGAGGGCCGGGGGCCCGGAGCGGACCAACAGCATCGTTTCTTCTATCCCGAGCCGGGCGCACAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS CAA 90 bp | TCGCATGGGCCGGAACCAGCCAGCTGGGCTCATCTTGGGCGGGTATaGAGGGGCCACGGGCCAACCAGCTCCAGGCGCCAGGACGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SHGPEPASWAHLGRV*RGHGPTSSRRQDVL Trigger: CAAGACGTCCTGGCGCCTGGAGCTGGTTGGCCCGTGGCCCCTCAATACCCGCCCAAGATGAGCCCAGCTGGCTGGTTCCGGCCCATGCGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS TCA 72 bp | CTAGTCCTGAGTCGCTGGGCTCCGGCTGGAGGGAGGTaGCCTCAGGCCACAGCGAGGGGGAGGAGCCCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: LVLSRWAPAGGR*PQATARGRSPV Trigger: AACAGGGCTCCTCCCCCTCGCTGTGGCCTGAGGTCACCTCCCTCCAGCCGGAGCCCAGCGACTCAGGACTAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS CCA 72 bp | AGGATCCCAGGCCCGGGTCCATGGGCAGAGTTCGCATaGGCCGGAACCAGCCAGCTGGGCTCATCTTGGGCG | + |
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Preference number: 6 (lower is better) Translates to: RIPGPGPWAEFA*AGTSQLGSSWA Trigger: CGCCCAAGATGAGCCCAGCTGGCTGGTTCCGGCCCATGCGAACTCTGCCCATGGACCCGGGCCTGGGATCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS CCA 72 bp | CATGGGCAGAGTTCGCATGGGCCGGAACCAGCCAGCTaGGCTCATCTTGGGCGGGTATTGAGGGGCCACGGG | + |
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Preference number: 6 (lower is better) Translates to: HGQSSHGPEPAS*AHLGRVLRGHG Trigger: CCCGTGGCCCCTCAATACCCGCCCAAGATGAGCCCAGCTGGCTGGTTCCGGCCCATGCGAACTCTGCCCATG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS CCA 72 bp | AGCCCTGTTCCTCTGAGGATCCCAGGCCCGGGTCCATaGGCAGAGTTCGCATGGGCCGGAACCAGCCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: SPVPLRIPGPGP*AEFAWAGTSQL Trigger: CAGCTGGCTGGTTCCGGCCCATGCGAACTCTGCCCATGGACCCGGGCCTGGGATCCTCAGAGGAACAGGGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS CCA 72 bp | AGGGCACAGTGGGCCCCGGGGCAGAGGGTAGGAGTGTaGGCTTCATGCTCACAGCTCGGAACTCCGCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: RAQWAPGQRVGV*ASCSQLGTPLH Trigger: ATGAAGCGGAGTTCCGAGCTGTGAGCATGAAGCCCACACTCCTACCCTCTGCCCCGGGGCCCACTGTGCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS CCA 72 bp | CCTTCTGCCTTTCCACACTGCACCCACTTGCCGCTCTaGTACCGCCAGTGGTGCTGGTCCACCAAGACCACA | + |
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Preference number: 6 (lower is better) Translates to: PSAFPHCTHLPL*YRQWCWSTKTT Trigger: TGTGGTCTTGGTGGACCAGCACCACTGGCGGTACCAGAGCGGCAAGTGGGTGCAGTGTGGAAAGGCAGAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS TCA 72 bp | TCCTGTAATGGCTTGTGGGCTCCAGCCCGGCCACGGTaGAGGACAGGAATGGGAACATTCGCCGTCCTTGCT | + |
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Preference number: 6 (lower is better) Translates to: SCNGLWAPARPR*RTGMGTFAVLA Trigger: AGCAAGGACGGCGAATGTTCCCATTCCTGTCCTTCACCGTGGCCGGGCTGGAGCCCACAAGCCATTACAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS GCA 72 bp | TGGGCCCCGGGGCAGAGGGTAGGAGTGTGGGCTTCATaGTCACAGCTCGGAACTCCGCTTCATAACTGTGTT | + |
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Preference number: 6 (lower is better) Translates to: WAPGQRVGVWAS*SQLGTPLHNCV Trigger: AACACAGTTATGAAGCGGAGTTCCGAGCTGTGAGCATGAAGCCCACACTCCTACCCTCTGCCCCGGGGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS CAA 90 bp | ATCATCTCTGTCTGGTGCTGGTTGAACTTGGACCACAACAGGTGGTaGCTGAGCGCGACTCTCAGCTTCCCAGACACCTCCAACCCCGCG | + |
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Preference number: 6 (lower is better) Translates to: IISVWCWLNLDHNRW*LSATLSFPDTSNPA Trigger: CGCGGGGTTGGAGGTGTCTGGGAAGCTGAGAGTCGCGCTCAGCAACCACCTGTTGTGGTCCAAGTTCAACCAGCACCAGACAGAGATGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS CCA 72 bp | TCTGTCTGGTGCTGGTTGAACTTGGACCACAACAGGTaGTTGCTGAGCGCGACTCTCAGCTTCCCAGACACC | + |
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Preference number: 6 (lower is better) Translates to: SVWCWLNLDHNR*LLSATLSFPDT Trigger: GGTGTCTGGGAAGCTGAGAGTCGCGCTCAGCAACCACCTGTTGTGGTCCAAGTTCAACCAGCACCAGACAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS CCA 72 bp | TCTCCATCATTCACCTCCACGATGTGCAGCCGGGGCTaGTACTTGTGGAGAGACTGCAGGACGATCATCTGG | + |
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Preference number: 6 (lower is better) Translates to: SPSFTSTMCSRG*YLWRDCRTIIW Trigger: CCAGATGATCGTCCTGCAGTCTCTCCACAAGTACCAGCCCCGGCTGCACATCGTGGAGGTGAATGATGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS CCA 72 bp | CCTTGGGCTGGCCTGGAAGGTCGGGGTAGAAACGGCTaGGAACAGGATACTGGTTGGATAGAAGAGGTGAGA | + |
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Preference number: 6 (lower is better) Translates to: PWAGLEGRGRNG*EQDTGWIEEVR Trigger: TCTCACCTCTTCTATCCAACCAGTATCCTGTTCCCAGCCGTTTCTACCCCGACCTTCCAGGCCAGCCCAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS CCA 72 bp | AAAGACGTGTGTGTTAGAAGCACTGCAGGCAGCCTCTaGCTCTCCATCATTCACCTCCACGATGTGCAGCCG | + |
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Preference number: 6 (lower is better) Translates to: KDVCVRSTAGSL*LSIIHLHDVQP Trigger: CGGCTGCACATCGTGGAGGTGAATGATGGAGAGCCAGAGGCTGCCTGCAGTGCTTCTAACACACACGTCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS GCA 72 bp | GGGTCCAGGTGGCGAGGGGACACTCGTATCAACAGATaGGTACATGGACTCAAAGTTCTCCCGGAATCCTTT | + |
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Preference number: 6 (lower is better) Translates to: GSRWRGDTRINR*VHGLKVLPESF Trigger: AAAGGATTCCGGGAGAACTTTGAGTCCATGTACGCATCTGTTGATACGAGTGTCCCCTCGCCACCTGGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS CAA 90 bp | GACTGCAGGACGATCATCTGGGTCACATTGTTGGAAGCCCCCTTGTaGTTGGTGAGCTTTAGCTTCCCAAATGAAACTTCCTGGCGCATC | + |
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Preference number: 6 (lower is better) Translates to: DCRTIIWVTLLEAPL*LVSFSFPNETSWRI Trigger: GATGCGCCAGGAAGTTTCATTTGGGAAGCTAAAGCTCACCAACAACAAGGGGGCTTCCAACAATGTGACCCAGATGATCGTCCTGCAGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS CAA 90 bp | AGAGACTGCAGGACGATCATCTGGGTCACATTGTTGGAAGCCCCCTaGTTGTTGGTGAGCTTTAGCTTCCCAAATGAAACTTCCTGGCGC | + |
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Preference number: 6 (lower is better) Translates to: RDCRTIIWVTLLEAP*LLVSFSFPNETSWR Trigger: GCGCCAGGAAGTTTCATTTGGGAAGCTAAAGCTCACCAACAACAAGGGGGCTTCCAACAATGTGACCCAGATGATCGTCCTGCAGTCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS CAA 72 bp | TGGAGAGACTGCAGGACGATCATCTGGGTCACATTGTaGGAAGCCCCCTTGTTGTTGGTGAGCTTTAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: WRDCRTIIWVTL*EAPLLLVSFSF Trigger: GAAGCTAAAGCTCACCAACAACAAGGGGGCTTCCAACAATGTGACCCAGATGATCGTCCTGCAGTCTCTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS CAA 72 bp | TTGTGGAGAGACTGCAGGACGATCATCTGGGTCACATaGTTGGAAGCCCCCTTGTTGTTGGTGAGCTTTAGC | + |
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Preference number: 6 (lower is better) Translates to: LWRDCRTIIWVT*LEAPLLLVSFS Trigger: GCTAAAGCTCACCAACAACAAGGGGGCTTCCAACAATGTGACCCAGATGATCGTCCTGCAGTCTCTCCACAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS TCA 72 bp | TCTGGGTCACATTGTTGGAAGCCCCCTTGTTGTTGGTaGGCTTTAGCTTCCCAAATGAAACTTCCTGGCGCA | + |
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Preference number: 6 (lower is better) Translates to: SGSHCWKPPCCW*ALASQMKLPGA Trigger: TGCGCCAGGAAGTTTCATTTGGGAAGCTAAAGCTCACCAACAACAAGGGGGCTTCCAACAATGTGACCCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS CAA 90 bp | TGGTACTTGTGGAGAGACTGCAGGACGATCATCTGGGTCACATTGTaGGAAGCCCCCTTGTTGTTGGTGAGCTTTAGCTTCCCAAATGAA | + |
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Preference number: 6 (lower is better) Translates to: WYLWRDCRTIIWVTL*EAPLLLVSFSFPNE Trigger: TTCATTTGGGAAGCTAAAGCTCACCAACAACAAGGGGGCTTCCAACAATGTGACCCAGATGATCGTCCTGCAGTCTCTCCACAAGTACCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS CAA 72 bp | ACGATCATCTGGGTCACATTGTTGGAAGCCCCCTTGTaGTTGGTGAGCTTTAGCTTCCCAAATGAAACTTCC | + |
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Preference number: 6 (lower is better) Translates to: TIIWVTLLEAPL*LVSFSFPNETS Trigger: GGAAGTTTCATTTGGGAAGCTAAAGCTCACCAACAACAAGGGGGCTTCCAACAATGTGACCCAGATGATCGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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| CDS CAA 72 bp | AGGACGATCATCTGGGTCACATTGTTGGAAGCCCCCTaGTTGTTGGTGAGCTTTAGCTTCCCAAATGAAACT | + |
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Preference number: 6 (lower is better) Translates to: RTIIWVTLLEAP*LLVSFSFPNET Trigger: AGTTTCATTTGGGAAGCTAAAGCTCACCAACAACAAGGGGGCTTCCAACAATGTGACCCAGATGATCGTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001484.3 |
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