Pregenerated sensors for TBX20 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031965Ensembl transcript IDs: ENSMUST00000052946.12, ENSMUST00000166018.4, ENSMUST00000215802.2
Found 218 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACGCTGATTCTTCCCTGGATCCAATCACAGATGAAGCCCGGCCCGTaGTGCACTCCCTTGCGAGTACGTGTTTTGCGAGTCCAGCTCTCC | + |
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Preference number: 1 (lower is better) Translates to: TLILPWIQSQMKPGP*CTPLRVRVLRVQLS Trigger: GGAGAGCTGGACTCGCAAAACACGTACTCGCAAGGGAGTGCACCACGGGCCGGGCTTCATCTGTGATTGGATCCAGGGAAGAATCAGCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR GCA 90 bp | CTGATTCTTCCCTGGATCCAATCACAGATGAAGCCCGGCCCGTGGTaGACTCCCTTGCGAGTACGTGTTTTGCGAGTCCAGCTCTCCTCT | + |
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Preference number: 1 (lower is better) Translates to: LILPWIQSQMKPGPW*TPLRVRVLRVQLSS Trigger: AGAGGAGAGCTGGACTCGCAAAACACGTACTCGCAAGGGAGTGCACCACGGGCCGGGCTTCATCTGTGATTGGATCCAGGGAAGAATCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR GCA 90 bp | GGTCTCCCATTTGAACTCAGAGCTCTGTGGTTTGGCCAGTCTAGCTaGCAGGTTGCTCACTGGATCTTGCCTCTGCCTCCTGATGATTGG | + |
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Preference number: 1 (lower is better) Translates to: GLPFELRALWFGQSS*QVAHWILPLPPDDW Trigger: CCAATCATCAGGAGGCAGAGGCAAGATCCAGTGAGCAACCTGGCAGCTAGACTGGCCAAACCACAGAGCTCTGAGTTCAAATGGGAGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR TCA 90 bp | GGAGGATGGAAGGTGTCCTTTTCCATTACCCTCCAGCTCACGTATTaGGGTGGGGTCTCCCATTTGAACTCAGAGCTCTGTGGTTTGGCC | + |
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Preference number: 1 (lower is better) Translates to: GGWKVSFSITLQLTY*GGVSHLNSELCGLA Trigger: GGCCAAACCACAGAGCTCTGAGTTCAAATGGGAGACCCCACCTCAATACGTGAGCTGGAGGGTAATGGAAAAGGACACCTTCCATCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR TCA 90 bp | TTCCCAGGGCAGAGAAATTTCCCTCAGAAGAGAGACACCAGACTTTaGATGTGTGAGGGAGAGCTTCAGCCATCACCATGCACGGGCTCT | + |
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Preference number: 1 (lower is better) Translates to: FPGQRNFPQKRDTRL*MCEGELQPSPCTGS Trigger: AGAGCCCGTGCATGGTGATGGCTGAAGCTCTCCCTCACACATTCAAAGTCTGGTGTCTCTCTTCTGAGGGAAATTTCTCTGCCCTGGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR GCA 90 bp | GGTTTGGCCAGTCTAGCTGCCAGGTTGCTCACTGGATCTTGCCTCTaGCTCCTGATGATTGGATTACAGGTGACCTCATGTCTACTCAGT | + |
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Preference number: 1 (lower is better) Translates to: GLASLAARLLTGSCL*LLMIGLQVTSCLLS Trigger: ACTGAGTAGACATGAGGTCACCTGTAATCCAATCATCAGGAGGCAGAGGCAAGATCCAGTGAGCAACCTGGCAGCTAGACTGGCCAAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR TCA 90 bp | ACTGCCAAAATAAGTCAGAAAGGCACTGGTGGTCCCAGGGTCAAGTaGCAGGGCACTCACATGGTGCTGTTTCTCTTGGGAGGTTTCTGT | + |
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Preference number: 1 (lower is better) Translates to: TAKISQKGTGGPRVK*QGTHMVLFLLGGFC Trigger: ACAGAAACCTCCCAAGAGAAACAGCACCATGTGAGTGCCCTGTCACTTGACCCTGGGACCACCAGTGCCTTTCTGACTTATTTTGGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR CCA 90 bp | AGCTGCCAGGTTGCTCACTGGATCTTGCCTCTGCCTCCTGATGATTaGATTACAGGTGACCTCATGTCTACTCAGTGTTTTCATGGGAAC | + |
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Preference number: 1 (lower is better) Translates to: SCQVAHWILPLPPDD*ITGDLMSTQCFHGN Trigger: GTTCCCATGAAAACACTGAGTAGACATGAGGTCACCTGTAATCCAATCATCAGGAGGCAGAGGCAAGATCCAGTGAGCAACCTGGCAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR CCA 90 bp | GGAGGTGTATCTGTAAGATACATGTGCATGTGGTACACATACAGGTaGGAGGAGGAGGATGGAAGGTGTCCTTTTCCATTACCCTCCAGC | + |
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Preference number: 1 (lower is better) Translates to: GGVSVRYMCMWYTYR*EEEDGRCPFPLPSS Trigger: GCTGGAGGGTAATGGAAAAGGACACCTTCCATCCTCCTCCTCCCACCTGTATGTGTACCACATGCACATGTATCTTACAGATACACCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR CCA 90 bp | AGCATGAGTATGTATGGAGGTGTATCTGTAAGATACATGTGCATGTaGTACACATACAGGTGGGAGGAGGAGGATGGAAGGTGTCCTTTT | + |
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Preference number: 1 (lower is better) Translates to: SMSMYGGVSVRYMCM*YTYRWEEEDGRCPF Trigger: AAAAGGACACCTTCCATCCTCCTCCTCCCACCTGTATGTGTACCACATGCACATGTATCTTACAGATACACCTCCATACATACTCATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR TCA 90 bp | ACTTTGGGAAATGGTCCACAGGTTAAACATAGTCTCCATCATTTCTaGAGGCAGTTTCTACACTGTGCACATCTGTTCACGTGTACCCCT | + |
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Preference number: 1 (lower is better) Translates to: TLGNGPQVKHSLHHF*RQFLHCAHLFTCTP Trigger: AGGGGTACACGTGAACAGATGTGCACAGTGTAGAAACTGCCTTCAGAAATGATGGAGACTATGTTTAACCTGTGGACCATTTCCCAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR CCA 90 bp | CAACTGGAAGTATTTCCACATGAACTGCTAAGGACAGGAACCAGGTaGTATGGTTCATTTAATACGGGATTGGCACACCATAACTTGGGA | + |
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Preference number: 1 (lower is better) Translates to: QLEVFPHELLRTGTR*YGSFNTGLAHHNLG Trigger: TCCCAAGTTATGGTGTGCCAATCCCGTATTAAATGAACCATACCACCTGGTTCCTGTCCTTAGCAGTTCATGTGGAAATACTTCCAGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR TCA 90 bp | CTTGAGTTAGTCTTGTCAATACGCTATATAGTATTGCCTTCTGGATaGTGCTCTGAACCTGTTGAAAGCGGAAAGAAACCTCTACACACG | + |
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Preference number: 1 (lower is better) Translates to: LELVLSIRYIVLPSG*CSEPVESGKKPLHT Trigger: CGTGTGTAGAGGTTTCTTTCCGCTTTCAACAGGTTCAGAGCATCATCCAGAAGGCAATACTATATAGCGTATTGACAAGACTAACTCAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR GCA 90 bp | ACAGGTGACCTCATGTCTACTCAGTGTTTTCATGGGAACAAGAGATaGAAAGTGCTGTTCTCAAACATTGTTCAGCAAGTGCTTTTCACA | + |
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Preference number: 1 (lower is better) Translates to: TGDLMSTQCFHGNKR*KVLFSNIVQQVLFT Trigger: TGTGAAAAGCACTTGCTGAACAATGTTTGAGAACAGCACTTTGCATCTCTTGTTCCCATGAAAACACTGAGTAGACATGAGGTCACCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR CCA 90 bp | ACCAGGGAAAATGAAAAGAAGTCTGTAAATGTAATACAGTCAGACTaGAGAAACCCACTACAGGGCATGTACATGCCCATAAGCATACAT | + |
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Preference number: 1 (lower is better) Translates to: TRENEKKSVNVIQSD*RNPLQGMYMPISIH Trigger: ATGTATGCTTATGGGCATGTACATGCCCTGTAGTGGGTTTCTCCAGTCTGACTGTATTACATTTACAGACTTCTTTTCATTTTCCCTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR CCA 90 bp | GGTTACCTGGTATGCAGGCTAGTTTTGTGCCAATCTGGAGTCAATTaGAAAGAGAGAATCTCAGTTGAGAAAATAACTTTACGAGAATGC | + |
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Preference number: 1 (lower is better) Translates to: GYLVCRLVLCQSGVN*KERISVEKITLREC Trigger: GCATTCTCGTAAAGTTATTTTCTCAACTGAGATTCTCTCTTTCCAATTGACTCCAGATTGGCACAAAACTAGCCTGCATACCAGGTAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR GCA 90 bp | GGAACAAGAGATGCAAAGTGCTGTTCTCAAACATTGTTCAGCAAGTaGTTTTCACATAGAGAACCTTCTGACCACAAGGAGTTTTCATTT | + |
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Preference number: 1 (lower is better) Translates to: GTRDAKCCSQTLFSK*FSHREPSDHKEFSF Trigger: AAATGAAAACTCCTTGTGGTCAGAAGGTTCTCTATGTGAAAAGCACTTGCTGAACAATGTTTGAGAACAGCACTTTGCATCTCTTGTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR CCA 90 bp | AAAAAGAGAGGGGATGGAAGACAGAGTTTATGTTATCATGGCCTGTaGATATGGCAGGAACTTGGTAAATGTGTTACCACATATTCATTC | + |
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Preference number: 1 (lower is better) Translates to: KKRGDGRQSLCYHGL*IWQELGKCVTTYSF Trigger: GAATGAATATGTGGTAACACATTTACCAAGTTCCTGCCATATCCACAGGCCATGATAACATAAACTCTGTCTTCCATCCCCTCTCTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR CCA 90 bp | AGATTATTTCTTGGGTTTGTGACAGATTCATTTTCCCTTTTCTTCTaGGAAGAAGTATGCTGTGTGGAGAAGTCAAGGGACAGATATTTA | + |
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Preference number: 1 (lower is better) Translates to: RLFLGFVTDSFSLFF*EEVCCVEKSRDRYL Trigger: TAAATATCTGTCCCTTGACTTCTCCACACAGCATACTTCTTCCCAGAAGAAAAGGGAAAATGAATCTGTCACAAACCCAAGAAATAATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR TCA 90 bp | GCAAACTGGTCACATCCTATAGGTGGAACACACTGTCTTCAAAGCTaGAAGTCTAAGGACTTTAATAAATCTATATTATTAGGGAAATGT | + |
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Preference number: 1 (lower is better) Translates to: ANWSHPIGGTHCLQS*KSKDFNKSILLGKC Trigger: ACATTTCCCTAATAATATAGATTTATTAAAGTCCTTAGACTTTCAGCTTTGAAGACAGTGTGTTCCACCTATAGGATGTGACCAGTTTGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR TCA 90 bp | GGGTCAAGTGACAGGGCACTCACATGGTGCTGTTTCTCTTGGGAGGTTTCTGTCATACCAGGGGAGAGATaGGGGGCACCCTGCACAGTC | + |
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Preference number: 2 (lower is better) Translates to: GSSDRALTWCCFSWEVSVIPGER*GAPCTV Trigger: GACTGTGCAGGGTGCCCCTCATCTCTCCCCTGGTAT...GACAGAAACCTCCCAAGAGAAACAGCACCATGTGAGTGCCCTGTCACTTGACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR TCA 90 bp | ACAGGTGGGAGGAGGAGGATGGAAGGTGTCCTTTTCCATTACCCTCCAGCTCACGCCTGGTCTATAGAGTaGGTTTCCAGGACAGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: TGGRRRMEGVLFHYPPAHAWSIE*VSRTAR Trigger: CCTGGCTGTCCTGGAAACTCACTCTATAGACCAGGC...GTGAGCTGGAGGGTAATGGAAAAGGACACCTTCCATCCTCCTCCTCCCACCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR GCA 90 bp | ATACAGGTGGGAGGAGGAGGATGGAAGGTGTCCTTTTCCATTACCCTCCAGCTCGAGGCAGAGGCAGGTTaGTTTCTGAGTTCGAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: IQVGGGGWKVSFSITLQLEAEAG*FLSSRP Trigger: TGGCCTCGAACTCAGAAAGCAACCTGCCTCTGCCTC...GAGCTGGAGGGTAATGGAAAAGGACACCTTCCATCCTCCTCCTCCCACCTGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR CCA 90 bp | ACAGGTGGGAGGAGGAGGATGGAAGGTGTCCTTTTCCATTACCCTCCAGCTCACTTTAATCCCAGCTCTTaGGAGGCAGAGGCAGGTTGC | + |
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Preference number: 2 (lower is better) Translates to: TGGRRRMEGVLFHYPPAHFNPSS*EAEAGC Trigger: GCAACCTGCCTCTGCCTCCCAAGAGCTGGGATTAAA...GTGAGCTGGAGGGTAATGGAAAAGGACACCTTCCATCCTCCTCCTCCCACCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR CCA 90 bp | ACAGGTGGGAGGAGGAGGATGGAAGGTGTCCTTTTCCATTACCCTCCAGCTCACAAGTCAGAAAGGCACTaGTGGTCCCAGGGTCAAGTG | + |
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Preference number: 2 (lower is better) Translates to: TGGRRRMEGVLFHYPPAHKSERH*WSQGQV Trigger: CACTTGACCCTGGGACCACCAGTGCCTTTCTGACTT...GTGAGCTGGAGGGTAATGGAAAAGGACACCTTCCATCCTCCTCCTCCCACCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR CAA 90 bp | AGGAGGATGGAAGGTGTCCTTTTCCATTACCCTCCAGCTCACGTATaGAGGTGGGGTCTCCCATTTGAACTCAGAGCTCTGTGGTTTGGC | + |
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Preference number: 2 (lower is better) Translates to: RRMEGVLFHYPPAHV*RWGLPFELRALWFG Trigger: GCCAAACCACAGAGCTCTGAGTTCAAATGGGAGACCCCACCTCAATACGTGAGCTGGAGGGTAATGGAAAAGGACACCTTCCATCCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR TCA 90 bp | ATACAGGTGGGAGGAGGAGGATGGAAGGTGTCCTTTTCCATTACCCTCCAGCTCAGGGTTGCTCTCCACTaGATTGGCATTGCTTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: IQVGGGGWKVSFSITLQLRVALH*IGIASW Trigger: CCAAGAAGCAATGCCAATTCAGTGGAGAGCAACCCT...GAGCTGGAGGGTAATGGAAAAGGACACCTTCCATCCTCCTCCTCCCACCTGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR GCA 90 bp | ACAGGTGGGAGGAGGAGGATGGAAGGTGTCCTTTTCCATTACCCTCCAGCTCACTTGCTCACTGGATCTTaGCTCTGCCTCCTGATGATT | + |
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Preference number: 2 (lower is better) Translates to: TGGRRRMEGVLFHYPPAHLLTGS*LCLLMI Trigger: AATCATCAGGAGGCAGAGGCAAGATCCAGTGAGCAA...GTGAGCTGGAGGGTAATGGAAAAGGACACCTTCCATCCTCCTCCTCCCACCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR CCA 90 bp | ACAGGTGGGAGGAGGAGGATGGAAGGTGTCCTTTTCCATTACCCTCCAGCTCACGTATACCATTGCTCATaGCTTAGATGGGGCAGGAGT | + |
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Preference number: 2 (lower is better) Translates to: TGGRRRMEGVLFHYPPAHVYHCS*LRWGRS Trigger: ACTCCTGCCCCATCTAAGCCATGAGCAATGGTATAC...GTGAGCTGGAGGGTAATGGAAAAGGACACCTTCCATCCTCCTCCTCCCACCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR CCA 90 bp | ACAGGTGGGAGGAGGAGGATGGAAGGTGTCCTTTTCCATTACCCTCCAGCTCACACGCTGATTCTTCCCTaGATCCAATCACAGATGAAG | + |
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Preference number: 2 (lower is better) Translates to: TGGRRRMEGVLFHYPPAHTLILP*IQSQMK Trigger: CTTCATCTGTGATTGGATCCAGGGAAGAATCAGCGT...GTGAGCTGGAGGGTAATGGAAAAGGACACCTTCCATCCTCCTCCTCCCACCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR CCA 90 bp | ATACAGGTGGGAGGAGGAGGATGGAAGGTGTCCTTTTCCATTACCCTCCAGCTCCTGCCTCCTGATGATTaGATTACAGGTGACCTCATG | + |
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Preference number: 2 (lower is better) Translates to: IQVGGGGWKVSFSITLQLLPPDD*ITGDLM Trigger: CATGAGGTCACCTGTAATCCAATCATCAGGAGGCAG...GAGCTGGAGGGTAATGGAAAAGGACACCTTCCATCCTCCTCCTCCCACCTGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR GCA 90 bp | ACAGGTGGGAGGAGGAGGATGGAAGGTGTCCTTTTCCATTACCCTCCAGCTCACTTCAAGAGCCCTCTTTaGTGTCATCATGCATTTCAG | + |
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Preference number: 2 (lower is better) Translates to: TGGRRRMEGVLFHYPPAHFKSPL*CHHAFQ Trigger: CTGAAATGCATGATGACAGCAAAGAGGGCTCTTGAA...GTGAGCTGGAGGGTAATGGAAAAGGACACCTTCCATCCTCCTCCTCCCACCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR GCA 90 bp | ATACAGGTGGGAGGAGGAGGATGGAAGGTGTCCTTTTCCATTACCCTCCAGCTCGCAGTTTCTACACTGTaGACATCTGTTCACGTGTAC | + |
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Preference number: 2 (lower is better) Translates to: IQVGGGGWKVSFSITLQLAVSTL*TSVHVY Trigger: GTACACGTGAACAGATGTGCACAGTGTAGAAACTGC...GAGCTGGAGGGTAATGGAAAAGGACACCTTCCATCCTCCTCCTCCCACCTGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR TCA 90 bp | ACTGGATCTTGCCTCTGCCTCCTGATGATTGGATTACAGGTGACCTCATGTCTAAGCAGGACCCCACTGTaGATTTTCAGTTCTTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: TGSCLCLLMIGLQVTSCLSRTPL*IFSSCL Trigger: CAGGCAAGAACTGAAAATTCACAGTGGGGTCCTGCT...TAGACATGAGGTCACCTGTAATCCAATCATCAGGAGGCAGAGGCAAGATCCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR GCA 90 bp | ATACAGGTGGGAGGAGGAGGATGGAAGGTGTCCTTTTCCATTACCCTCCAGCTCGCGTATAAGTCTCAGTaGACATGTGACAGAGCAAAT | + |
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Preference number: 2 (lower is better) Translates to: IQVGGGGWKVSFSITLQLAYKSQ*TCDRAN Trigger: ATTTGCTCTGTCACATGTGCACTGAGACTTATACGC...GAGCTGGAGGGTAATGGAAAAGGACACCTTCCATCCTCCTCCTCCCACCTGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR CCA 90 bp | GGGTCAAGTGACAGGGCACTCACATGGTGCTGTTTCTCTTGGGAGGTTTCTGTCGAGTTTATGTTATCATaGCCTGTGGATATGGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: GSSDRALTWCCFSWEVSVEFMLS*PVDMAG Trigger: TCCTGCCATATCCACAGGCCATGATAACATAAACTC...GACAGAAACCTCCCAAGAGAAACAGCACCATGTGAGTGCCCTGTCACTTGACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR TCA 90 bp | ACTGGATCTTGCCTCTGCCTCCTGATGATTGGATTACAGGTGACCTCATGTCTACGCTGGAGTGAAAAATaGAGAGGACTTTGGTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: TGSCLCLLMIGLQVTSCLRWSEK*RGLWFP Trigger: TGGGAACCAAAGTCCTCTTCATTTTTCACTCCAGCG...TAGACATGAGGTCACCTGTAATCCAATCATCAGGAGGCAGAGGCAAGATCCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR GCA 90 bp | ATACAGGTGGGAGGAGGAGGATGGAAGGTGTCCTTTTCCATTACCCTCCAGCTCATGCAGTGTCTTACATaGTCCTTAGTGACTAAACCA | + |
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Preference number: 2 (lower is better) Translates to: IQVGGGGWKVSFSITLQLMQCLT*SLVTKP Trigger: TGGTTTAGTCACTAAGGAGCATGTAAGACACTGCAT...GAGCTGGAGGGTAATGGAAAAGGACACCTTCCATCCTCCTCCTCCCACCTGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR CCA 90 bp | ACTGGATCTTGCCTCTGCCTCCTGATGATTGGATTACAGGTGACCTCATGTCTAATGGAGAGTGGCCATTaGCAAATCCCTGACAAGGAT | + |
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Preference number: 2 (lower is better) Translates to: TGSCLCLLMIGLQVTSCLMESGH*QIPDKD Trigger: ATCCTTGTCAGGGATTTGCCAATGGCCACTCTCCAT...TAGACATGAGGTCACCTGTAATCCAATCATCAGGAGGCAGAGGCAAGATCCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR CCA 90 bp | ACTGGATCTTGCCTCTGCCTCCTGATGATTGGATTACAGGTGACCTCATGTCTAGTAATACAGTCAGACTaGAGAAACCCACTACAGGGC | + |
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Preference number: 2 (lower is better) Translates to: TGSCLCLLMIGLQVTSCLVIQSD*RNPLQG Trigger: GCCCTGTAGTGGGTTTCTCCAGTCTGACTGTATTAC...TAGACATGAGGTCACCTGTAATCCAATCATCAGGAGGCAGAGGCAAGATCCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR CCA 90 bp | ATACAGGTGGGAGGAGGAGGATGGAAGGTGTCCTTTTCCATTACCCTCCAGCTCGGAATTCATCCCGCATaGAAAAGCCTAACATTAAAG | + |
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Preference number: 2 (lower is better) Translates to: IQVGGGGWKVSFSITLQLGIHPA*KSLTLK Trigger: CTTTAATGTTAGGCTTTTCCATGCGGGATGAATTCC...GAGCTGGAGGGTAATGGAAAAGGACACCTTCCATCCTCCTCCTCCCACCTGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR GCA 90 bp | GACAGATTCATTTTCCCTTTTCTTCTGGGAAGAAGTATGCTGTGTGGAGAAGTCTTCCTGGAGAGTCCTTaGTCCAATACCCCACTTCCC | + |
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Preference number: 2 (lower is better) Translates to: DRFIFPFLLGRSMLCGEVFLESP*SNTPLP Trigger: GGGAAGTGGGGTATTGGAGCAAGGACTCTCCAGGAA...GACTTCTCCACACAGCATACTTCTTCCCAGAAGAAAAGGGAAAATGAATCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR GCA 90 bp | ATACAGGTGGGAGGAGGAGGATGGAAGGTGTCCTTTTCCATTACCCTCCAGCTCGTCATTGAATTAACATaGAGCTTCATATTAGGGACC | + |
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Preference number: 2 (lower is better) Translates to: IQVGGGGWKVSFSITLQLVIELT*SFILGT Trigger: GGTCCCTAATATGAAGCTGCATGTTAATTCAATGAC...GAGCTGGAGGGTAATGGAAAAGGACACCTTCCATCCTCCTCCTCCCACCTGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR GCA 90 bp | GGGTCAAGTGACAGGGCACTCACATGGTGCTGTTTCTCTTGGGAGGTTTCTGTCGTGGAGAACATCAAGTaGAAAAACCTAAAACTAGCA | + |
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Preference number: 2 (lower is better) Translates to: GSSDRALTWCCFSWEVSVVENIK*KNLKLA Trigger: TGCTAGTTTTAGGTTTTTGCACTTGATGTTCTCCAC...GACAGAAACCTCCCAAGAGAAACAGCACCATGTGAGTGCCCTGTCACTTGACCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR GCA 90 bp | ATACAGGTGGGAGGAGGAGGATGGAAGGTGTCCTTTTCCATTACCCTCCAGCTCTTTGGTCAGCCCATTTaGTATAACATCACTACGTAT | + |
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Preference number: 2 (lower is better) Translates to: IQVGGGGWKVSFSITLQLFGQPI*YNITTY Trigger: ATACGTAGTGATGTTATAGCAAATGGGCTGACCAAA...GAGCTGGAGGGTAATGGAAAAGGACACCTTCCATCCTCCTCCTCCCACCTGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR CCA 90 bp | ACAGGTGGGAGGAGGAGGATGGAAGGTGTCCTTTTCCATTACCCTCCAGCTCACCTTACCCTTGCTCTATaGGCATTTATTTTAAATACC | + |
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Preference number: 2 (lower is better) Translates to: TGGRRRMEGVLFHYPPAHLTLAL*AFILNT Trigger: GGTATTTAAAATAAATGCCCATAGAGCAAGGGTAAG...GTGAGCTGGAGGGTAATGGAAAAGGACACCTTCCATCCTCCTCCTCCCACCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR CAA 90 bp | AAAAACCTAAAACTAGCATCCCATGCTCAGACTGGGTATGGTACCTaGTTTCATAGACTGGACTTGGCCTTGGAATTCATCCCGCATGGA | + |
|
Preference number: 2 (lower is better) Translates to: KNLKLASHAQTGYGT*FHRLDLALEFIPHG Trigger: TCCATGCGGGATGAATTCCAAGGCCAAGTCCAGTCTATGAAACAAGGTACCATACCCAGTCTGAGCATGGGATGCTAGTTTTAGGTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR-3UTR TCA 90 bp | ACTGGATCTTGCCTCTGCCTCCTGATGATTGGATTACAGGTGACCTCATGTCTACATCATGCATTTCAGTaGGTTTCATCCTCAAGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: TGSCLCLLMIGLQVTSCLHHAFQ*VSSSSK Trigger: TTTGCTTGAGGATGAAACTCACTGAAATGCATGATG...TAGACATGAGGTCACCTGTAATCCAATCATCAGGAGGCAGAGGCAAGATCCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR-3UTR TCA 90 bp | ACTGGATCTTGCCTCTGCCTCCTGATGATTGGATTACAGGTGACCTCATGTCTACACACTGCATTACAGTaGCTTTTCCACACAATTTGT | + |
|
Preference number: 2 (lower is better) Translates to: TGSCLCLLMIGLQVTSCLHTALQ*LFHTIC Trigger: ACAAATTGTGTGGAAAAGTCACTGTAATGCAGTGTG...TAGACATGAGGTCACCTGTAATCCAATCATCAGGAGGCAGAGGCAAGATCCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR TCA 90 bp | ACTGGATCTTGCCTCTGCCTCCTGATGATTGGATTACAGGTGACCTCATGTCTACCTCTTTTTATCAGGTaGGAATATACAGACACCAGA | + |
|
Preference number: 2 (lower is better) Translates to: TGSCLCLLMIGLQVTSCLPLFIR*EYTDTR Trigger: TCTGGTGTCTGTATATTCTCACCTGATAAAAAGAGG...TAGACATGAGGTCACCTGTAATCCAATCATCAGGAGGCAGAGGCAAGATCCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR CCA 90 bp | GCCATTGGCAAATCCCTGACAAGGATGGAAACAGCAGCAAAGCAGATGTATATTCATGGCCTGTGGATATaGCAGGAACTTGGTAAATGT | + |
|
Preference number: 2 (lower is better) Translates to: AIGKSLTRMETAAKQMYIHGLWI*QELGKC Trigger: ACATTTACCAAGTTCCTGCCATATCCACAGGCCATG...AATATACATCTGCTTTGCTGCTGTTTCCATCCTTGTCAGGGATTTGCCAATGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR CCA 90 bp | ATGCCTTTAACTACTTTGGGAAATGGTCCACAGGTTAAACATAGTCTCCATCATTCAGAAAGGCACTGGTaGTCCCAGGGTCAAGTGACA | + |
|
Preference number: 2 (lower is better) Translates to: MPLTTLGNGPQVKHSLHHSERHW*SQGQVT Trigger: TGTCACTTGACCCTGGGACCACCAGTGCCTTTCTGA...ATGATGGAGACTATGTTTAACCTGTGGACCATTTCCCAAAGTAGTTAAAGGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR CCA 90 bp | ACTGGATCTTGCCTCTGCCTCCTGATGATTGGATTACAGGTGACCTCATGTCTAAGTTTTGTGCCAATCTaGAGTCAATTGGAAAGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: TGSCLCLLMIGLQVTSCLSFVPI*SQLERE Trigger: CTCTCTTTCCAATTGACTCCAGATTGGCACAAAACT...TAGACATGAGGTCACCTGTAATCCAATCATCAGGAGGCAGAGGCAAGATCCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR CAA 90 bp | GGTGTGTGGAAGATGACTAAGACCTTGAATTTGGCTAGTCCTACTTaGGTCAGCCCATTTGCTATAACATCACTACGTATACCATTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: GVWKMTKTLNLASPT*VSPFAITSLRIPLL Trigger: GAGCAATGGTATACGTAGTGATGTTATAGCAAATGGGCTGACCAAAGTAGGACTAGCCAAATTCAAGGTCTTAGTCATCTTCCACACACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR-3UTR TCA 90 bp | CATCTGTATTTTGTCTGGAAACCAACTACCTGTGGATACTACTACAAGGCACACTTGCTGACGCTGGAGTaGAAAATGAAGAGGACTTTG | + |
|
Preference number: 2 (lower is better) Translates to: HLYFVWKPTTCGYYYKAHLLTLE*KMKRTL Trigger: CAAAGTCCTCTTCATTTTTCACTCCAGCGTCAGCAA...GTGTGCCTTGTAGTAGTATCCACAGGTAGTTGGTTTCCAGACAAAATACAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR-3UTR TCA 90 bp | GATTGGATTACAGGTGACCTCATGTCTACTCAGTGTTTTCATGGGAACAAGAGATTACCTGACAACTGTTaGTGTGTCACACACAACTGG | + |
|
Preference number: 2 (lower is better) Translates to: DWITGDLMSTQCFHGNKRLPDNC*CVTHNW Trigger: CCAGTTGTGTGTGACACATCAACAGTTGTCAGGTAA...TCTCTTGTTCCCATGAAAACACTGAGTAGACATGAGGTCACCTGTAATCCAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR-3UTR GCA 90 bp | AATATGCCTTTAACTACTTTGGGAAATGGTCCACAGGTTAAACATAGTCTCCATCAACTCTGCCCCGTCTaGAGCAAGCAAACTGACACA | + |
|
Preference number: 2 (lower is better) Translates to: NMPLTTLGNGPQVKHSLHQLCPV*SKQTDT Trigger: TGTGTCAGTTTGCTTGCTGCAGACGGGGCAGAGTTG...ATGGAGACTATGTTTAACCTGTGGACCATTTCCCAAAGTAGTTAAAGGCATATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR-3UTR GCA 90 bp | ACTGGATCTTGCCTCTGCCTCCTGATGATTGGATTACAGGTGACCTCATGTCTATCTTTGCTGTCATCATaGATTTCAGTGAGTTTCATC | + |
|
Preference number: 2 (lower is better) Translates to: TGSCLCLLMIGLQVTSCLSLLSS*ISVSFI Trigger: GATGAAACTCACTGAAATGCATGATGACAGCAAAGA...TAGACATGAGGTCACCTGTAATCCAATCATCAGGAGGCAGAGGCAAGATCCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR GCA 90 bp | ATGCCTTTAACTACTTTGGGAAATGGTCCACAGGTTAAACATAGTCTCCATCATAGGGCACTCACATGGTaGTGTTTCTCTTGGGAGGTT | + |
|
Preference number: 2 (lower is better) Translates to: MPLTTLGNGPQVKHSLHHRALTW*CFSWEV Trigger: AACCTCCCAAGAGAAACAGCACCATGTGAGTGCCCT...ATGATGGAGACTATGTTTAACCTGTGGACCATTTCCCAAAGTAGTTAAAGGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR GCA 90 bp | GACAGATTCATTTTCCCTTTTCTTCTGGGAAGAAGTATGCTGTGTGGAGAAGTCGGTAAGATCTTAGAATaGCCCAGAAGTTGGTGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: DRFIFPFLLGRSMLCGEVGKILE*PRSWCS Trigger: ACTGCACCAACTTCTGGGGCATTCTAAGATCTTACC...GACTTCTCCACACAGCATACTTCTTCCCAGAAGAAAAGGGAAAATGAATCTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR CAA 90 bp | CCAAGATCAGATCCATCTGGAGAGAGCTTCATGCTGTTTCTTAATTaGGCAGATGACATCAAGTGGCAGTATCATGTTTTATCAGCAAGG | + |
|
Preference number: 2 (lower is better) Translates to: PRSDPSGESFMLFLN*ADDIKWQYHVLSAR Trigger: CCTTGCTGATAAAACATGATACTGCCACTTGATGTCATCTGCCAAATTAAGAAACAGCATGAAGCTCTCTCCAGATGGATCTGATCTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166018.4 |
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| 3UTR-3UTR TCA 90 bp | ATGCCTTTAACTACTTTGGGAAATGGTCCACAGGTTAAACATAGTCTCCATCATGTGCCTTTCTATGATTaGGCTTGCAGAGGAAAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: MPLTTLGNGPQVKHSLHHVPFYD*ACRGKV Trigger: CACCTTTCCTCTGCAAGCTCAATCATAGAAAGGCAC...ATGATGGAGACTATGTTTAACCTGTGGACCATTTCCCAAAGTAGTTAAAGGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR TCA 90 bp | GATTGGATTACAGGTGACCTCATGTCTACTCAGTGTTTTCATGGGAACAAGAGAAGTCTCCATCATTTCTaGAGGCAGTTTCTACACTGT | + |
|
Preference number: 2 (lower is better) Translates to: DWITGDLMSTQCFHGNKRSLHHF*RQFLHC Trigger: ACAGTGTAGAAACTGCCTTCAGAAATGATGGAGACT...TCTCTTGTTCCCATGAAAACACTGAGTAGACATGAGGTCACCTGTAATCCAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR CCA 90 bp | ATGCCTTTAACTACTTTGGGAAATGGTCCACAGGTTAAACATAGTCTCCATCATGAATGCCCCAGAAGTTaGTGCAGTTCATACACAAGG | + |
|
Preference number: 2 (lower is better) Translates to: MPLTTLGNGPQVKHSLHHECPRS*CSSYTR Trigger: CCTTGTGTATGAACTGCACCAACTTCTGGGGCATTC...ATGATGGAGACTATGTTTAACCTGTGGACCATTTCCCAAAGTAGTTAAAGGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR CAA 90 bp | AGGACAGTGATAAAGGGTTGCTCTCCACTGAATTGGCATTGCTTCTaGGTTAATTATATAAACCAGCCATGTTGTTACTTGGCTATGCTG | + |
|
Preference number: 2 (lower is better) Translates to: RTVIKGCSPLNWHCF*VNYINQPCCYLAML Trigger: CAGCATAGCCAAGTAACAACATGGCTGGTTTATATAATTAACCAAGAAGCAATGCCAATTCAGTGGAGAGCAACCCTTTATCACTGTCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR TCA 90 bp | CCGAACAGAGAACGCACAAGATTTCTTATACTTACAACATTTCTAGTAAGTGTGGAACCTCCTGAGTTATaGGCAAGTCCATTAGAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: PNRERTRFLILTTFLVSVEPPEL*ASPLEL Trigger: GAGCTCTAATGGACTTGCTCATAACTCAGGAGGTTC...CACACTTACTAGAAATGTTGTAAGTATAAGAAATCTTGTGCGTTCTCTGTTCGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR GCA 90 bp | ATGCCTTTAACTACTTTGGGAAATGGTCCACAGGTTAAACATAGTCTCCATCATCCACATCCCACACACTaGATTACAGTGACTTTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: MPLTTLGNGPQVKHSLHHPHPTH*ITVTFP Trigger: TGGAAAAGTCACTGTAATGCAGTGTGTGGGATGTGG...ATGATGGAGACTATGTTTAACCTGTGGACCATTTCCCAAAGTAGTTAAAGGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR CCA 90 bp | AATATGCCTTTAACTACTTTGGGAAATGGTCCACAGGTTAAACATAGTCTCCATTTCATAGACTGGACTTaGCCTTGGAATTCATCCCGC | + |
|
Preference number: 2 (lower is better) Translates to: NMPLTTLGNGPQVKHSLHFIDWT*PWNSSR Trigger: GCGGGATGAATTCCAAGGCCAAGTCCAGTCTATGAA...ATGGAGACTATGTTTAACCTGTGGACCATTTCCCAAAGTAGTTAAAGGCATATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR CCA 90 bp | GATTGGATTACAGGTGACCTCATGTCTACTCAGTGTTTTCATGGGAACAAGAGAATAAAGAGCCTTCTTTaGAGCACTCACCATAAATGC | + |
|
Preference number: 2 (lower is better) Translates to: DWITGDLMSTQCFHGNKRIKSLL*STHHKC Trigger: GCATTTATGGTGAGTGCTCCAAAGAAGGCTCTTTAT...TCTCTTGTTCCCATGAAAACACTGAGTAGACATGAGGTCACCTGTAATCCAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR CAA 90 bp | AAACAAACAAAAGCAAAACAAGGTTACCTGGTATGCAGGCTAGTTTaGTGCCAATCTGGAGTCAATTGGAAAGAGAGAATCTCAGTTGAG | + |
|
Preference number: 2 (lower is better) Translates to: KQTKAKQGYLVCRLV*CQSGVNWKERISVE Trigger: CTCAACTGAGATTCTCTCTTTCCAATTGACTCCAGATTGGCACAAAACTAGCCTGCATACCAGGTAACCTTGTTTTGCTTTTGTTTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR GCA 90 bp | GATTGGATTACAGGTGACCTCATGTCTACTCAGTGTTTTCATGGGAACAAGAGAGTAGAGGGTTTTCATTaGATAACTGCAAAGTTGTTG | + |
|
Preference number: 2 (lower is better) Translates to: DWITGDLMSTQCFHGNKRVEGFH*ITAKLL Trigger: CAACAACTTTGCAGTTATGCAATGAAAACCCTCTAC...TCTCTTGTTCCCATGAAAACACTGAGTAGACATGAGGTCACCTGTAATCCAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR CCA 90 bp | AATATGCCTTTAACTACTTTGGGAAATGGTCCACAGGTTAAACATAGTCTCCATTGTTATCATGGCCTGTaGATATGGCAGGAACTTGGT | + |
|
Preference number: 2 (lower is better) Translates to: NMPLTTLGNGPQVKHSLHCYHGL*IWQELG Trigger: ACCAAGTTCCTGCCATATCCACAGGCCATGATAACA...ATGGAGACTATGTTTAACCTGTGGACCATTTCCCAAAGTAGTTAAAGGCATATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR CCA 90 bp | ATGCCTTTAACTACTTTGGGAAATGGTCCACAGGTTAAACATAGTCTCCATCATCCTTGTTTCATAGACTaGACTTGGCCTTGGAATTCA | + |
|
Preference number: 2 (lower is better) Translates to: MPLTTLGNGPQVKHSLHHPCFID*TWPWNS Trigger: TGAATTCCAAGGCCAAGTCCAGTCTATGAAACAAGG...ATGATGGAGACTATGTTTAACCTGTGGACCATTTCCCAAAGTAGTTAAAGGCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR CCA 90 bp | GACAGATTCATTTTCCCTTTTCTTCTGGGAAGAAGTATGCTGTGTGGAGAAGTCACTATGGACTTTTGGTaGAGAACATCAAGTGCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: DRFIFPFLLGRSMLCGEVTMDFW*RTSSAK Trigger: TTTTGCACTTGATGTTCTCCACCAAAAGTCCATAGT...GACTTCTCCACACAGCATACTTCTTCCCAGAAGAAAAGGGAAAATGAATCTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR CCA 90 bp | TTCTTCAAAGGTCCCCTGAAAGGCAGAGAAAGTCATGTCATCTTCCTTCACATTGCAGATGACATCAAGTaGCAGTATCATGTTTTATCA | + |
|
Preference number: 2 (lower is better) Translates to: FFKGPLKGRESHVIFLHIADDIK*QYHVLS Trigger: TGATAAAACATGATACTGCCACTTGATGTCATCTGC...AATGTGAAGGAAGATGACATGACTTTCTCTGCCTTTCAGGGGACCTTTGAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166018.4 |
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| 3UTR-3UTR TCA 90 bp | CCGAACAGAGAACGCACAAGATTTCTTATACTTACAACATTTCTAGTAAGTGTGATTAAGCTTTCTGGGTaGACTGATAGCCCATTAGCT | + |
|
Preference number: 2 (lower is better) Translates to: PNRERTRFLILTTFLVSVIKLSG*TDSPLA Trigger: AGCTAATGGGCTATCAGTTCACCCAGAAAGCTTAAT...CACACTTACTAGAAATGTTGTAAGTATAAGAAATCTTGTGCGTTCTCTGTTCGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR GCA 90 bp | GCAGAGAAAGTCATGTCATCTTCCTTCACATTTCTCCACTATAAGAGAATACTTCTGGAGAGAGCTTCATaGTGTTTCTTAATTTGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: AEKVMSSSFTFLHYKRILLERAS*CFLIWQ Trigger: CTGCCAAATTAAGAAACAGCATGAAGCTCTCTCCAG...AAGTATTCTCTTATAGTGGAGAAATGTGAAGGAAGATGACATGACTTTCTCTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166018.4 |
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| 3UTR-3UTR CCA 90 bp | GACAGATTCATTTTCCCTTTTCTTCTGGGAAGAAGTATGCTGTGTGGAGAAGTCGATGTGGTAAGTATATaGCATTTACTCCTAAACACA | + |
|
Preference number: 2 (lower is better) Translates to: DRFIFPFLLGRSMLCGEVDVVSI*HLLLNT Trigger: TGTGTTTAGGAGTAAATGCCATATACTTACCACATC...GACTTCTCCACACAGCATACTTCTTCCCAGAAGAAAAGGGAAAATGAATCTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR CCA 90 bp | ATGCCTTTAACTACTTTGGGAAATGGTCCACAGGTTAAACATAGTCTCCATCATTTTTCCCTTTTCTTCTaGGAAGAAGTATGCTGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: MPLTTLGNGPQVKHSLHHFSLFF*EEVCCV Trigger: CACACAGCATACTTCTTCCCAGAAGAAAAGGGAAAA...ATGATGGAGACTATGTTTAACCTGTGGACCATTTCCCAAAGTAGTTAAAGGCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR TCA 90 bp | AATATGCCTTTAACTACTTTGGGAAATGGTCCACAGGTTAAACATAGTCTCCATAGGGACCAGGGAAAATaGAAAGAAGTCTGTAAATGT | + |
|
Preference number: 2 (lower is better) Translates to: NMPLTTLGNGPQVKHSLHRDQGK*KEVCKC Trigger: ACATTTACAGACTTCTTTTCATTTTCCCTGGTCCCT...ATGGAGACTATGTTTAACCTGTGGACCATTTCCCAAAGTAGTTAAAGGCATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR CCA 90 bp | ATGCCTTTAACTACTTTGGGAAATGGTCCACAGGTTAAACATAGTCTCCATCATGAACATAGGAAAAACTaGATGAAGCTCTTGTATTCC | + |
|
Preference number: 2 (lower is better) Translates to: MPLTTLGNGPQVKHSLHHEHRKN*MKLLYS Trigger: GGAATACAAGAGCTTCATCCAGTTTTTCCTATGTTC...ATGATGGAGACTATGTTTAACCTGTGGACCATTTCCCAAAGTAGTTAAAGGCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| 3UTR-3UTR CCA 90 bp | GCAGAGAAAGTCATGTCATCTTCCTTCACATTTCTCCACTATAAGAGAATACTTTGCTGTTTCTTAATTTaGCAGATGACATCAAGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: AEKVMSSSFTFLHYKRILCCFLI*QMTSSG Trigger: GCCACTTGATGTCATCTGCCAAATTAAGAAACAGCA...AAGTATTCTCTTATAGTGGAGAAATGTGAAGGAAGATGACATGACTTTCTCTGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166018.4 |
||
| 3UTR-3UTR TCA 90 bp | CCGAACAGAGAACGCACAAGATTTCTTATACTTACAACATTTCTAGTAAGTGTGAGGCAGTACAAGACATaGCATTTTACTGCTAAGATT | + |
|
Preference number: 2 (lower is better) Translates to: PNRERTRFLILTTFLVSVRQYKT*HFTAKI Trigger: AATCTTAGCAGTAAAATGTCATGTCTTGTACTGCCT...CACACTTACTAGAAATGTTGTAAGTATAAGAAATCTTGTGCGTTCTCTGTTCGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR-3UTR CCA 90 bp | CTCCACTATAAGAGAATACTTGAGACTGGGCTCTCCATAAAGAAAAGATGTTCAATATGTCAAGGAAGATaGGTCTATTTTGTAACCACT | + |
|
Preference number: 2 (lower is better) Translates to: LHYKRILETGLSIKKRCSICQGR*VYFVTT Trigger: AGTGGTTACAAAATAGACCCATCTTCCTTGACATAT...TGAACATCTTTTCTTTATGGAGAGCCCAGTCTCAAGTATTCTCTTATAGTGGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166018.4 |
||
| 3UTR CCA 72 bp | CTTCCCTGGATCCAATCACAGATGAAGCCCGGCCCGTaGTGCACTCCCTTGCGAGTACGTGTTTTGCGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: LPWIQSQMKPGP*CTPLRVRVLRV Trigger: GACTCGCAAAACACGTACTCGCAAGGGAGTGCACCACGGGCCGGGCTTCATCTGTGATTGGATCCAGGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR CCA 72 bp | GGCACTGGTGGCATGCACGCCTTTAATCCCAGCTCTTaGGAGGCAGAGGCAGGTTGCTTTCTGAGTTCGAGG | + |
|
Preference number: 3 (lower is better) Translates to: GTGGMHAFNPSS*EAEAGCFLSSR Trigger: CCTCGAACTCAGAAAGCAACCTGCCTCTGCCTCCCAAGAGCTGGGATTAAAGGCGTGCATGCCACCAGTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR GCA 72 bp | GCCTTTAATCCCAGCTCTTGGGAGGCAGAGGCAGGTTaGTTTCTGAGTTCGAGGCCAGCCTGGTCTATAGAG | + |
|
Preference number: 3 (lower is better) Translates to: AFNPSSWEAEAG*FLSSRPAWSIE Trigger: CTCTATAGACCAGGCTGGCCTCGAACTCAGAAAGCAACCTGCCTCTGCCTCCCAAGAGCTGGGATTAAAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR CCA 72 bp | GTGCATGTGGTACACATACAGGTGGGAGGAGGAGGATaGAAGGTGTCCTTTTCCATTACCCTCCAGCTCACG | + |
|
Preference number: 3 (lower is better) Translates to: VHVVHIQVGGGG*KVSFSITLQLT Trigger: CGTGAGCTGGAGGGTAATGGAAAAGGACACCTTCCATCCTCCTCCTCCCACCTGTATGTGTACCACATGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGTGGGAGGAGGAGGATGGAAGGTGTCCTTTTCCATTACCCTCCAGCTCACAACAACCCCATGACATaGCATCATAACCCAGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: TGGRRRMEGVLFHYPPAHNNPMT*HHNPEP Trigger: TGGCTCTGGGTTATGATGCAATGTCATGGGGTTGTT...GTGAGCTGGAGGGTAATGGAAAAGGACACCTTCCATCCTCCTCCTCCCACCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR GCA 72 bp | AGTCTAGCTGCCAGGTTGCTCACTGGATCTTGCCTCTaGCTCCTGATGATTGGATTACAGGTGACCTCATGT | + |
|
Preference number: 3 (lower is better) Translates to: SLAARLLTGSCL*LLMIGLQVTSC Trigger: ACATGAGGTCACCTGTAATCCAATCATCAGGAGGCAGAGGCAAGATCCAGTGAGCAACCTGGCAGCTAGACT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR-3UTR CAA 90 bp | ACTGGATCTTGCCTCTGCCTCCTGATGATTGGATTACAGGTGACCTCATGTCTATTTCCTGGAGAGTCCTaGCTCCAATACCCCACTTCC | + |
|
Preference number: 3 (lower is better) Translates to: TGSCLCLLMIGLQVTSCLFPGES*LQYPTS Trigger: GGAAGTGGGGTATTGGAGCAAGGACTCTCCAGGAAA...TAGACATGAGGTCACCTGTAATCCAATCATCAGGAGGCAGAGGCAAGATCCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR-3UTR CAA 90 bp | GACAGATTCATTTTCCCTTTTCTTCTGGGAAGAAGTATGCTGTGTGGAGAAGTCGGAGGCAGAGGCAGGTaGCTTTCTGAGTTCGAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: DRFIFPFLLGRSMLCGEVGGRGR*LSEFEA Trigger: GGCCTCGAACTCAGAAAGCAACCTGCCTCTGCCTCC...GACTTCTCCACACAGCATACTTCTTCCCAGAAGAAAAGGGAAAATGAATCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGTGGGAGGAGGAGGATGGAAGGTGTCCTTTTCCATTACCCTCCAGCTCACATGCCTTTAACTACTTaGGGAAATGGTCCACAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: TGGRRRMEGVLFHYPPAHMPLTT*GNGPQV Trigger: AACCTGTGGACCATTTCCCAAAGTAGTTAAAGGCAT...GTGAGCTGGAGGGTAATGGAAAAGGACACCTTCCATCCTCCTCCTCCCACCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR TCA 72 bp | AAGGTGTCCTTTTCCATTACCCTCCAGCTCACGTATTaGGGTGGGGTCTCCCATTTGAACTCAGAGCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: KVSFSITLQLTY*GGVSHLNSELC Trigger: ACAGAGCTCTGAGTTCAAATGGGAGACCCCACCTCAATACGTGAGCTGGAGGGTAATGGAAAAGGACACCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR CCA 72 bp | AGCTCTCCTCTTTCCTTTAATAAGTCCTGTGTTTCCTaGAGAGTCCTTGCTCCAATACCCCACTTCCCACCC | + |
|
Preference number: 3 (lower is better) Translates to: SSPLSFNKSCVS*RVLAPIPHFPP Trigger: GGGTGGGAAGTGGGGTATTGGAGCAAGGACTCTCCAGGAAACACAGGACTTATTAAAGGAAAGAGGAGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR CCA 72 bp | GTCCTTTTCCATTACCCTCCAGCTCACGTATTGAGGTaGGGTCTCCCATTTGAACTCAGAGCTCTGTGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: VLFHYPPAHVLR*GLPFELRALWF Trigger: AAACCACAGAGCTCTGAGTTCAAATGGGAGACCCCACCTCAATACGTGAGCTGGAGGGTAATGGAAAAGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR-3UTR CAA 90 bp | ATACAGGTGGGAGGAGGAGGATGGAAGGTGTCCTTTTCCATTACCCTCCAGCTCCAGAAGCCATCCTCTTaGAAAATGAGAGAGCTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: IQVGGGGWKVSFSITLQLQKPSS*KMRELL Trigger: AAGAAGCTCTCTCATTTTCAAAGAGGATGGCTTCTG...GAGCTGGAGGGTAATGGAAAAGGACACCTTCCATCCTCCTCCTCCCACCTGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR-3UTR CAA 90 bp | ACAGTCAGACTGGAGAAACCCACTACAGGGCATGTACATGCCCATAAGCATACAGATGCTCTGAACCTGTaGAAAGCGGAAAGAAACCTC | + |
|
Preference number: 3 (lower is better) Translates to: TVRLEKPTTGHVHAHKHTDALNL*KAERNL Trigger: GAGGTTTCTTTCCGCTTTCAACAGGTTCAGAGCATC...TGTATGCTTATGGGCATGTACATGCCCTGTAGTGGGTTTCTCCAGTCTGACTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR-3UTR CAA 90 bp | GACAGATTCATTTTCCCTTTTCTTCTGGGAAGAAGTATGCTGTGTGGAGAAGTCTTGCGAGTACGTGTTTaGCGAGTCCAGCTCTCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: DRFIFPFLLGRSMLCGEVLRVRV*RVQLSS Trigger: AGAGGAGAGCTGGACTCGCAAAACACGTACTCGCAA...GACTTCTCCACACAGCATACTTCTTCCCAGAAGAAAAGGGAAAATGAATCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR-3UTR CAA 90 bp | GACAGATTCATTTTCCCTTTTCTTCTGGGAAGAAGTATGCTGTGTGGAGAAGTCAGACTGGACTTGGCCTaGGAATTCATCCCGCATGGA | + |
|
Preference number: 3 (lower is better) Translates to: DRFIFPFLLGRSMLCGEVRLDLA*EFIPHG Trigger: TCCATGCGGGATGAATTCCAAGGCCAAGTCCAGTCT...GACTTCTCCACACAGCATACTTCTTCCCAGAAGAAAAGGGAAAATGAATCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR-3UTR CAA 90 bp | ATACAGGTGGGAGGAGGAGGATGGAAGGTGTCCTTTTCCATTACCCTCCAGCTCTTGGCACACCATAACTaGGGATTATTGAGGAATATT | + |
|
Preference number: 3 (lower is better) Translates to: IQVGGGGWKVSFSITLQLLAHHN*GLLRNI Trigger: AATATTCCTCAATAATCCCAAGTTATGGTGTGCCAA...GAGCTGGAGGGTAATGGAAAAGGACACCTTCCATCCTCCTCCTCCCACCTGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR-3UTR CAA 90 bp | ATACAGGTGGGAGGAGGAGGATGGAAGGTGTCCTTTTCCATTACCCTCCAGCTCCAGAGGAAAGGTGTTTaGGTATTTTATAACTCGCAT | + |
|
Preference number: 3 (lower is better) Translates to: IQVGGGGWKVSFSITLQLQRKGV*VFYNSH Trigger: ATGCGAGTTATAAAATACCAAAACACCTTTCCTCTG...GAGCTGGAGGGTAATGGAAAAGGACACCTTCCATCCTCCTCCTCCCACCTGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR CCA 72 bp | ATGCTCAGACTGGGTATGGTACCTTGTTTCATAGACTaGACTTGGCCTTGGAATTCATCCCGCATGGAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: MLRLGMVPCFID*TWPWNSSRMEK Trigger: CTTTTCCATGCGGGATGAATTCCAAGGCCAAGTCCAGTCTATGAAACAAGGTACCATACCCAGTCTGAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR CCA 72 bp | GTTGCTCACTGGATCTTGCCTCTGCCTCCTGATGATTaGATTACAGGTGACCTCATGTCTACTCAGTGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: VAHWILPLPPDD*ITGDLMSTQCF Trigger: AAAACACTGAGTAGACATGAGGTCACCTGTAATCCAATCATCAGGAGGCAGAGGCAAGATCCAGTGAGCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR CCA 72 bp | ATGTATGGAGGTGTATCTGTAAGATACATGTGCATGTaGTACACATACAGGTGGGAGGAGGAGGATGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: MYGGVSVRYMCM*YTYRWEEEDGR Trigger: CCTTCCATCCTCCTCCTCCCACCTGTATGTGTACCACATGCACATGTATCTTACAGATACACCTCCATACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR TCA 72 bp | AAGCATGCATATGGAGAGTGGCCATTGGCAAATCCCTaGCAAGGATGGAAACAGCAGCAAAGCAGATGTATA | + |
|
Preference number: 3 (lower is better) Translates to: KHAYGEWPLANP*QGWKQQQSRCI Trigger: TATACATCTGCTTTGCTGCTGTTTCCATCCTTGTCAGGGATTTGCCAATGGCCACTCTCCATATGCATGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR TCA 72 bp | ATGGAGCAGACAGCCACTGAGCTAGACAATGTTACCTaGCAACTGTTGATGTGTCACACACAACTGGAAGTA | + |
|
Preference number: 3 (lower is better) Translates to: MEQTATELDNVT*QLLMCHTQLEV Trigger: TACTTCCAGTTGTGTGTGACACATCAACAGTTGTCAGGTAACATTGTCTAGCTCAGTGGCTGTCTGCTCCAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR GCA 72 bp | GCCCCAGAAGTTGGTGCAGTTCATACACAAGGCTTCTaGATGACGATGAACCTATATAAAGAGCCTTCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: APEVGAVHTQGF*MTMNLYKEPSL Trigger: CAAAGAAGGCTCTTTATATAGGTTCATCGTCATGCAGAAGCCTTGTGTATGAACTGCACCAACTTCTGGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR-3UTR CAA 90 bp | GATTGGATTACAGGTGACCTCATGTCTACTCAGTGTTTTCATGGGAACAAGAGAAGAATGCCCCAGAAGTaGGTGCAGTTCATACACAAG | + |
|
Preference number: 3 (lower is better) Translates to: DWITGDLMSTQCFHGNKRRMPQK*VQFIHK Trigger: CTTGTGTATGAACTGCACCAACTTCTGGGGCATTCT...TCTCTTGTTCCCATGAAAACACTGAGTAGACATGAGGTCACCTGTAATCCAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR TCA 72 bp | CACACAAGAAGCTGCACTCACCTGCAGTGTCTGCCATaGGAGTTTAGAATCATTTCCTTAACAGTTCATGCT | + |
|
Preference number: 3 (lower is better) Translates to: HTRSCTHLQCLP*EFRIISLTVHA Trigger: AGCATGAACTGTTAAGGAAATGATTCTAAACTCTCATGGCAGACACTGCAGGTGAGTGCAGCTTCTTGTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR TCA 72 bp | GTGGAGAAGTCAAGGGACAGATATTTATCCAGTGGTTaGGAAGGTAAGATCTTAGAATGCCCCAGAAGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: VEKSRDRYLSSG*EGKILECPRSW Trigger: CCAACTTCTGGGGCATTCTAAGATCTTACCTTCTCAACCACTGGATAAATATCTGTCCCTTGACTTCTCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR CCA 72 bp | GTATTTCCACATGAACTGCTAAGGACAGGAACCAGGTaGTATGGTTCATTTAATACGGGATTGGCACACCAT | + |
|
Preference number: 3 (lower is better) Translates to: VFPHELLRTGTR*YGSFNTGLAHH Trigger: ATGGTGTGCCAATCCCGTATTAAATGAACCATACCACCTGGTTCCTGTCCTTAGCAGTTCATGTGGAAATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR CCA 72 bp | CTTGGGTTTGTGACAGATTCATTTTCCCTTTTCTTCTaGGAAGAAGTATGCTGTGTGGAGAAGTCAAGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: LGFVTDSFSLFF*EEVCCVEKSRD Trigger: GTCCCTTGACTTCTCCACACAGCATACTTCTTCCCAGAAGAAAAGGGAAAATGAATCTGTCACAAACCCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR-3UTR CAA 90 bp | ACAGTCAGACTGGAGAAACCCACTACAGGGCATGTACATGCCCATAAGCATACATATTTTCATAGCCATTaGCACACTCTGTATCTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: TVRLEKPTTGHVHAHKHTYFHSH*HTLYLA Trigger: AGCTAGATACAGAGTGTGCAAATGGCTATGAAAATA...TGTATGCTTATGGGCATGTACATGCCCTGTAGTGGGTTTCTCCAGTCTGACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR TCA 72 bp | AATGGTCCACAGGTTAAACATAGTCTCCATCATTTCTaGAGGCAGTTTCTACACTGTGCACATCTGTTCACG | + |
|
Preference number: 3 (lower is better) Translates to: NGPQVKHSLHHF*RQFLHCAHLFT Trigger: CGTGAACAGATGTGCACAGTGTAGAAACTGCCTTCAGAAATGATGGAGACTATGTTTAACCTGTGGACCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR TCA 72 bp | CATGCTTTCTTTCACATCAGTTCTTCAAAGGTCCCCTaGAAGGCAGAGAAAGTCATGTCATCTTCCTTCACA | + |
|
Preference number: 3 (lower is better) Translates to: HAFFHISSSKVP*KAEKVMSSSFT Trigger: TGTGAAGGAAGATGACATGACTTTCTCTGCCTTTCAGGGGACCTTTGAAGAACTGATGTGAAAGAAAGCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166018.4 |
||
| 3UTR GCA 72 bp | GATGCAAAGTGCTGTTCTCAAACATTGTTCAGCAAGTaGTTTTCACATAGAGAACCTTCTGACCACAAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: DAKCCSQTLFSK*FSHREPSDHKE Trigger: CTCCTTGTGGTCAGAAGGTTCTCTATGTGAAAAGCACTTGCTGAACAATGTTTGAGAACAGCACTTTGCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR CCA 72 bp | GGTATGGTACCTTGTTTCATAGACTGGACTTGGCCTTaGAATTCATCCCGCATGGAAAAGCCTAACATTAAA | + |
|
Preference number: 3 (lower is better) Translates to: GMVPCFIDWTWP*NSSRMEKPNIK Trigger: TTTAATGTTAGGCTTTTCCATGCGGGATGAATTCCAAGGCCAAGTCCAGTCTATGAAACAAGGTACCATACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR TCA 72 bp | GTCTTGTCAATACGCTATATAGTATTGCCTTCTGGATaGTGCTCTGAACCTGTTGAAAGCGGAAAGAAACCT | + |
|
Preference number: 3 (lower is better) Translates to: VLSIRYIVLPSG*CSEPVESGKKP Trigger: AGGTTTCTTTCCGCTTTCAACAGGTTCAGAGCATCATCCAGAAGGCAATACTATATAGCGTATTGACAAGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR TCA 72 bp | GTTAATCAAATGAAGACACAGCAAACAGGGAGACTGTaGCAGAGACTACTGATCAGGGTTACAGAATCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: VNQMKTQQTGRL*QRLLIRVTESL Trigger: AAGAGATTCTGTAACCCTGATCAGTAGTCTCTGTCACAGTCTCCCTGTTTGCTGTGTCTTCATTTGATTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR GCA 72 bp | CTCATGTCTACTCAGTGTTTTCATGGGAACAAGAGATaGAAAGTGCTGTTCTCAAACATTGTTCAGCAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: LMSTQCFHGNKR*KVLFSNIVQQV Trigger: CACTTGCTGAACAATGTTTGAGAACAGCACTTTGCATCTCTTGTTCCCATGAAAACACTGAGTAGACATGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR CCA 72 bp | CATTTTCCCTTTTCTTCTGGGAAGAAGTATGCTGTGTaGAGAAGTCAAGGGACAGATATTTATCCAGTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: HFPFSSGKKYAV*RSQGTDIYPVV Trigger: AACCACTGGATAAATATCTGTCCCTTGACTTCTCCACACAGCATACTTCTTCCCAGAAGAAAAGGGAAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR-3UTR CAA 90 bp | ATGCCTTTAACTACTTTGGGAAATGGTCCACAGGTTAAACATAGTCTCCATCATATGGTGCTGTTTCTCTaGGGAGGTTTCTGTCTGATT | + |
|
Preference number: 3 (lower is better) Translates to: MPLTTLGNGPQVKHSLHHMVLFL*GGFCLI Trigger: AATCAGACAGAAACCTCCCAAGAGAAACAGCACCAT...ATGATGGAGACTATGTTTAACCTGTGGACCATTTCCCAAAGTAGTTAAAGGCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR GCA 72 bp | ACAGATTCATTTTCCCTTTTCTTCTGGGAAGAAGTATaGTGTGTGGAGAAGTCAAGGGACAGATATTTATCC | + |
|
Preference number: 3 (lower is better) Translates to: TDSFSLFFWEEV*CVEKSRDRYLS Trigger: GGATAAATATCTGTCCCTTGACTTCTCCACACAGCATACTTCTTCCCAGAAGAAAAGGGAAAATGAATCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR GCA 72 bp | CTACTCAGTGTTTTCATGGGAACAAGAGATGCAAAGTaGTGTTCTCAAACATTGTTCAGCAAGTGCTTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: LLSVFMGTRDAK*CSQTLFSKCFS Trigger: TGAAAAGCACTTGCTGAACAATGTTTGAGAACAGCACTTTGCATCTCTTGTTCCCATGAAAACACTGAGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR CCA 72 bp | AATGAAAAGAAGTCTGTAAATGTAATACAGTCAGACTaGAGAAACCCACTACAGGGCATGTACATGCCCATA | + |
|
Preference number: 3 (lower is better) Translates to: NEKKSVNVIQSD*RNPLQGMYMPI Trigger: TATGGGCATGTACATGCCCTGTAGTGGGTTTCTCCAGTCTGACTGTATTACATTTACAGACTTCTTTTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR-3UTR CAA 90 bp | CTCCACTATAAGAGAATACTTGAGACTGGGCTCTCCATAAAGAAAAGATGTTCAATGCTGTTTCTTAATTaGGCAGATGACATCAAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: LHYKRILETGLSIKKRCSMLFLN*ADDIKW Trigger: CCACTTGATGTCATCTGCCAAATTAAGAAACAGCAT...TGAACATCTTTTCTTTATGGAGAGCCCAGTCTCAAGTATTCTCTTATAGTGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166018.4 |
||
| 3UTR TCA 72 bp | AGACACAGCTGCTCCTTTGGCTCACTTCATCAATATTaGGGTGGCTTGATGTATCTTTTCTGTATAAACTTT | + |
|
Preference number: 3 (lower is better) Translates to: RHSCSFGSLHQY*GGLMYLFCINF Trigger: AAAGTTTATACAGAAAAGATACATCAAGCCACCTCAATATTGATGAAGTGAGCCAAAGGAGCAGCTGTGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR TCA 72 bp | CCAATCTGGAGTCAATTGGAAAGAGAGAATCTCAGTTaGGAAAATAACTTTACGAGAATGCTCCATGGACAA | + |
|
Preference number: 3 (lower is better) Translates to: PIWSQLERENLS*ENNFTRMLHGQ Trigger: TTGTCCATGGAGCATTCTCGTAAAGTTATTTTCTCAACTGAGATTCTCTCTTTCCAATTGACTCCAGATTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR GCA 72 bp | ACAGTGATAAAGGGTTGCTCTCCACTGAATTGGCATTaGTTCTTGGTTAATTATATAAACCAGCCATGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: TVIKGCSPLNWH*FLVNYINQPCC Trigger: ACAACATGGCTGGTTTATATAATTAACCAAGAAGCAATGCCAATTCAGTGGAGAGCAACCCTTTATCACTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR CCA 72 bp | ATCCATCTGGAGAGAGCTTCATGCTGTTTCTTAATTTaGCAGATGACATCAAGTGGCAGTATCATGTTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: IHLERASCCFLI*QMTSSGSIMFY Trigger: ATAAAACATGATACTGCCACTTGATGTCATCTGCCAAATTAAGAAACAGCATGAAGCTCTCTCCAGATGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166018.4 |
||
| 3UTR GCA 72 bp | GAGAGAATCTCAGTTGAGAAAATAACTTTACGAGAATaGTCCATGGACAAGCCTATAGTGTGTTTTCTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: ERISVEKITLRE*SMDKPIVCFLD Trigger: ATCAAGAAAACACACTATAGGCTTGTCCATGGAGCATTCTCGTAAAGTTATTTTCTCAACTGAGATTCTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR CCA 72 bp | ACTAAAATAAATTCAGGCAACCTACATAAAGCAAACTaGTCACATCCTATAGGTGGAACACACTGTCTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: TKINSGNLHKAN*SHPIGGTHCLQ Trigger: TTGAAGACAGTGTGTTCCACCTATAGGATGTGACCAGTTTGCTTTATGTAGGTTGCCTGAATTTATTTTAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR CCA 72 bp | TTCATGCTGTTTCTTAATTTGGCAGATGACATCAAGTaGCAGTATCATGTTTTATCAGCAAGGGTATATCCA | + |
|
Preference number: 3 (lower is better) Translates to: FMLFLNLADDIK*QYHVLSARVYP Trigger: TGGATATACCCTTGCTGATAAAACATGATACTGCCACTTGATGTCATCTGCCAAATTAAGAAACAGCATGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166018.4 |
||
| 3UTR-3UTR CAA 90 bp | CCGAACAGAGAACGCACAAGATTTCTTATACTTACAACATTTCTAGTAAGTGTGTGTAGAGGGTTTTCATaGCATAACTGCAAAGTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: PNRERTRFLILTTFLVSVCRGFS*HNCKVV Trigger: AACAACTTTGCAGTTATGCAATGAAAACCCTCTACA...CACACTTACTAGAAATGTTGTAAGTATAAGAAATCTTGTGCGTTCTCTGTTCGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR TCA 72 bp | GTTTTTAAGATACATATATTCAAGTTCAGGGCCAAGTaGCATAGGAAACATAAAGTCATATGTCCCTGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: VFKIHIFKFRAK*HRKHKVICPWS Trigger: ACTCCAGGGACATATGACTTTATGTTTCCTATGTCACTTGGCCCTGAACTTGAATATATGTATCTTAAAAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR TCA 72 bp | AAATTGTTTATAGAAACAAAGCTCTTGCTGGTGTTTTaGGTGGAATTGTGCTGGACTGATTGTTCGAAATTG | + |
|
Preference number: 3 (lower is better) Translates to: KLFIETKLLLVF*VELCWTDCSKL Trigger: CAATTTCGAACAATCAGTCCAGCACAATTCCACTCAAAACACCAGCAAGAGCTTTGTTTCTATAAACAATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| CDS-3UTR CCA 90 bp | ACTGGATCTTGCCTCTGCCTCCTGATGATTGGATTACAGGTGACCTCATGTCTAGCTCGAGAGGAGAGCTaGGGCTTGGGCGACGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: TGSCLCLLMIGLQVTSCLAREES*GLGDAV Trigger: CACGGCGTCGCCCAAGCCCCAGCTCTCCTCTCGAGC...TAGACATGAGGTCACCTGTAATCCAATCATCAGGAGGCAGAGGCAAGATCCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| CDS-3UTR GCA 90 bp | ACAGTCAGACTGGAGAAACCCACTACAGGGCATGTACATGCCCATAAGCATACAGCGGGGGATCAGCTTTaGCAGCCACCAGCCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: TVRLEKPTTGHVHAHKHTAGDQL*QPPARM Trigger: CATCCTGGCTGGTGGCTGGCAAAGCTGATCCCCCGC...TGTATGCTTATGGGCATGTACATGCCCTGTAGTGGGTTTCTCCAGTCTGACTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| CDS-3UTR TCA 90 bp | GGGTCAAGTGACAGGGCACTCACATGGTGCTGTTTCTCTTGGGAGGTTTCTGTCTCCTGCCAGACTTGGTaGTTATCATCTCCGTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GSSDRALTWCCFSWEVSVSCQTW*LSSPCP Trigger: TGGGCACGGAGATGATAATCACCAAGTCTGGCAGGA...GACAGAAACCTCCCAAGAGAAACAGCACCATGTGAGTGCCCTGTCACTTGACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| CDS-3UTR GCA 90 bp | ATACAGGTGGGAGGAGGAGGATGGAAGGTGTCCTTTTCCATTACCCTCCAGCTCCGGTGTCGCTATGGATaGTGTACTGGTACCAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: IQVGGGGWKVSFSITLQLRCRYG*CTGTKS Trigger: GCTCTTGGTACCAGTACAGCATCCATAGCGACACCG...GAGCTGGAGGGTAATGGAAAAGGACACCTTCCATCCTCCTCCTCCCACCTGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR CAA 72 bp | TTTGGCCAGTCTAGCTGCCAGGTTGCTCACTGGATCTaGCCTCTGCCTCCTGATGATTGGATTACAGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: FGQSSCQVAHWI*PLPPDDWITGD Trigger: GTCACCTGTAATCCAATCATCAGGAGGCAGAGGCAAGATCCAGTGAGCAACCTGGCAGCTAGACTGGCCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| CDS-3UTR TCA 90 bp | CATCTGTATTTTGTCTGGAAACCAACTACCTGTGGATACTACTACAAGGCACACTGTGCACAGAGAGGATaGGGATGGGCTGCCGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: HLYFVWKPTTCGYYYKAHCAQRG*GWAAAP Trigger: GGGGGCGGCAGCCCATCCTCATCCTCTCTGTGCACA...GTGTGCCTTGTAGTAGTATCCACAGGTAGTTGGTTTCCAGACAAAATACAGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| CDS-3UTR GCA 90 bp | ATACAGGTGGGAGGAGGAGGATGGAAGGTGTCCTTTTCCATTACCCTCCAGCTCTTTGATGGTGTTCTCTaGTGCCTCCTTCTCCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: IQVGGGGWKVSFSITLQLFDGVL*CLLLLG Trigger: CCCAAGGAGAAGGAGGCAGCAGAGAACACCATCAAA...GAGCTGGAGGGTAATGGAAAAGGACACCTTCCATCCTCCTCCTCCCACCTGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| CDS-3UTR GCA 90 bp | GGGTCAAGTGACAGGGCACTCACATGGTGCTGTTTCTCTTGGGAGGTTTCTGTCGTATCAGTGGCTCTGTaGACAGAGAGGATGAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: GSSDRALTWCCFSWEVSVVSVAL*TERMRM Trigger: CATCCTCATCCTCTCTGTGCACAGAGCCACTGATAC...GACAGAAACCTCCCAAGAGAAACAGCACCATGTGAGTGCCCTGTCACTTGACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| CDS-3UTR CCA 90 bp | TGTCATCTTCCTTCACATTTCTCCACTATAAGAGAATACTTGAGACTGGGCTCTGCTCGAGAGGAGAGCTaGGGCTTGGGCGACGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: CHLPSHFSTIREYLRLGSAREES*GLGDAV Trigger: CACGGCGTCGCCCAAGCCCCAGCTCTCCTCTCGAGC...AGAGCCCAGTCTCAAGTATTCTCTTATAGTGGAGAAATGTGAAGGAAGATGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166018.4 |
||
| CDS-3UTR CCA 90 bp | ACTGGATCTTGCCTCTGCCTCCTGATGATTGGATTACAGGTGACCTCATGTCTAATGACACGCGGATGGTaGGGAACATCCTCCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TGSCLCLLMIGLQVTSCLMTRGW*GTSSCQ Trigger: CTGGCAGGAGGATGTTCCCCACCATCCGCGTGTCAT...TAGACATGAGGTCACCTGTAATCCAATCATCAGGAGGCAGAGGCAAGATCCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| CDS-3UTR CCA 90 bp | ACAGTCAGACTGGAGAAACCCACTACAGGGCATGTACATGCCCATAAGCATACAGGTGGTGGGTATCAGTaGCTCTGTGCACAGAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TVRLEKPTTGHVHAHKHTGGGYQ*LCAQRG Trigger: TCCTCTCTGTGCACAGAGCCACTGATACCCACCACC...TGTATGCTTATGGGCATGTACATGCCCTGTAGTGGGTTTCTCCAGTCTGACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR CAA 72 bp | GAAGGTGTCCTTTTCCATTACCCTCCAGCTCACGTATaGAGGTGGGGTCTCCCATTTGAACTCAGAGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EGVLFHYPPAHV*RWGLPFELRAL Trigger: CAGAGCTCTGAGTTCAAATGGGAGACCCCACCTCAATACGTGAGCTGGAGGGTAATGGAAAAGGACACCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| CDS-3UTR TCA 90 bp | CATCTGTATTTTGTCTGGAAACCAACTACCTGTGGATACTACTACAAGGCACACCCCTCTCAATGTCAGTaGGCCTGGAGGAGTCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: HLYFVWKPTTCGYYYKAHPSQCQ*AWRSPG Trigger: TCCGGGACTCCTCCAGGCTCACTGACATTGAGAGGG...GTGTGCCTTGTAGTAGTATCCACAGGTAGTTGGTTTCCAGACAAAATACAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| CDS-3UTR GCA 90 bp | CATCTGTATTTTGTCTGGAAACCAACTACCTGTGGATACTACTACAAGGCACACCCTCTTCCCCATAGGTaGGGATGGGTGACCGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: HLYFVWKPTTCGYYYKAHPLPHR*GWVTGH Trigger: ATGCCCGGTCACCCATCCGCACCTATGGGGAAGAGG...GTGTGCCTTGTAGTAGTATCCACAGGTAGTTGGTTTCCAGACAAAATACAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| CDS-3UTR CCA 90 bp | ACTGGATCTTGCCTCTGCCTCCTGATGATTGGATTACAGGTGACCTCATGTCTAAGCTCACCCAGTGGCTaGGCACATGATGATTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TGSCLCLLMIGLQVTSCLSSPSG*AHDDFS Trigger: GGAGAAATCATCATGTGCCCAGCCACTGGGTGAGCT...TAGACATGAGGTCACCTGTAATCCAATCATCAGGAGGCAGAGGCAAGATCCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| CDS-3UTR CCA 90 bp | ATACAGGTGGGAGGAGGAGGATGGAAGGTGTCCTTTTCCATTACCCTCCAGCTCTCAGGACTATATACTTaGACTCAGGATCCACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IQVGGGGWKVSFSITLQLSGLYT*TQDPLQ Trigger: CTGGAGTGGATCCTGAGTCCAAGTATATAGTCCTGA...GAGCTGGAGGGTAATGGAAAAGGACACCTTCCATCCTCCTCCTCCCACCTGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| CDS-3UTR CCA 90 bp | GATTGGATTACAGGTGACCTCATGTCTACTCAGTGTTTTCATGGGAACAAGAGACACGTAGAGCCTGGCTaGCAGCGGGGGATCAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: DWITGDLMSTQCFHGNKRHVEPG*QRGISF Trigger: AAAGCTGATCCCCCGCTGCCAGCCAGGCTCTACGTG...TCTCTTGTTCCCATGAAAACACTGAGTAGACATGAGGTCACCTGTAATCCAATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| CDS-3UTR CCA 90 bp | ACTGGATCTTGCCTCTGCCTCCTGATGATTGGATTACAGGTGACCTCATGTCTAGACCACTTCCCTGCATaGAGCTGGCTATTGCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: TGSCLCLLMIGLQVTSCLDHFPA*SWLLQM Trigger: CATCTGCAATAGCCAGCTCCATGCAGGGAAGTGGTC...TAGACATGAGGTCACCTGTAATCCAATCATCAGGAGGCAGAGGCAAGATCCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| CDS-3UTR TCA 90 bp | GCAGAGAAAGTCATGTCATCTTCCTTCACATTTCTCCACTATAAGAGAATACTTTGTGCACAGAGAGGATaGGGATGGGCTGCCGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: AEKVMSSSFTFLHYKRILCAQRG*GWAAAP Trigger: GGGGGCGGCAGCCCATCCTCATCCTCTCTGTGCACA...AAGTATTCTCTTATAGTGGAGAAATGTGAAGGAAGATGACATGACTTTCTCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166018.4 |
||
| CDS-3UTR TCA 90 bp | CATCTGTATTTTGTCTGGAAACCAACTACCTGTGGATACTACTACAAGGCACACTCTCTTCGCTGGGGATaGTGGGGGTGGTGGGTATCA | + |
|
Preference number: 4 (lower is better) Translates to: HLYFVWKPTTCGYYYKAHSLRWG*WGWWVS Trigger: TGATACCCACCACCCCCATCATCCCCAGCGAAGAGA...GTGTGCCTTGTAGTAGTATCCACAGGTAGTTGGTTTCCAGACAAAATACAGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| CDS-3UTR TCA 90 bp | TTTCTTTCACATCAGTTCTTCAAAGGTCCCCTGAAAGGCAGAGAAAGTCATGTCTCTCTTCGCTGGGGATaGTGGGGGTGGTGGGTATCA | + |
|
Preference number: 4 (lower is better) Translates to: FLSHQFFKGPLKGRESHVSLRWG*WGWWVS Trigger: TGATACCCACCACCCCCATCATCCCCAGCGAAGAGA...GACATGACTTTCTCTGCCTTTCAGGGGACCTTTGAAGAACTGATGTGAAAGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000166018.4 |
||
| CDS-3UTR TCA 90 bp | CTCCACTATAAGAGAATACTTGAGACTGGGCTCTCCATAAAGAAAAGATGTTCAAGCCACCAGCCAGGATaGCCGGTGGTAGGCATAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LHYKRILETGLSIKKRCSSHQPG*PVVGIA Trigger: CGCTATGCCTACCACCGGTCATCCTGGCTGGTGGCT...TGAACATCTTTTCTTTATGGAGAGCCCAGTCTCAAGTATTCTCTTATAGTGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166018.4 |
||
| CDS-3UTR CCA 90 bp | GATTGGATTACAGGTGACCTCATGTCTACTCAGTGTTTTCATGGGAACAAGAGACGATGGAGAAGGCATTaGCTCGAGAGGAGAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: DWITGDLMSTQCFHGNKRRWRRH*LERRAG Trigger: CCCAGCTCTCCTCTCGAGCCAATGCCTTCTCCATCG...TCTCTTGTTCCCATGAAAACACTGAGTAGACATGAGGTCACCTGTAATCCAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| CDS-3UTR CCA 90 bp | TGTCTCATGGTTTTAAGAAGCAAAACATCCAAGATTCAGGCTCACTCTCCTAGGATGACACGCGGATGGTaGGGAACATCCTCCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CLMVLRSKTSKIQAHSPRMTRGW*GTSSCQ Trigger: CTGGCAGGAGGATGTTCCCCACCATCCGCGTGTCAT...CCTAGGAGAGTGAGCCTGAATCTTGGATGTTTTGCTTCTTAAAACCATGAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166018.4 |
||
| CDS-3UTR TCA 90 bp | AATATGCCTTTAACTACTTTGGGAAATGGTCCACAGGTTAAACATAGTCTCCATAGCCACCAGCCAGGATaGCCGGTGGTAGGCATAGCG | + |
|
Preference number: 4 (lower is better) Translates to: NMPLTTLGNGPQVKHSLHSHQPG*PVVGIA Trigger: CGCTATGCCTACCACCGGTCATCCTGGCTGGTGGCT...ATGGAGACTATGTTTAACCTGTGGACCATTTCCCAAAGTAGTTAAAGGCATATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| CDS-3UTR TCA 90 bp | CTCCACTATAAGAGAATACTTGAGACTGGGCTCTCCATAAAGAAAAGATGTTCACCCTCTCAATGTCAGTaGGCCTGGAGGAGTCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LHYKRILETGLSIKKRCSPSQCQ*AWRSPG Trigger: TCCGGGACTCCTCCAGGCTCACTGACATTGAGAGGG...TGAACATCTTTTCTTTATGGAGAGCCCAGTCTCAAGTATTCTCTTATAGTGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166018.4 |
||
| CDS-3UTR CCA 90 bp | TGTCATCTTCCTTCACATTTCTCCACTATAAGAGAATACTTGAGACTGGGCTCTCGATGGAGAAGGCATTaGCTCGAGAGGAGAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CHLPSHFSTIREYLRLGSRWRRH*LERRAG Trigger: CCCAGCTCTCCTCTCGAGCCAATGCCTTCTCCATCG...AGAGCCCAGTCTCAAGTATTCTCTTATAGTGGAGAAATGTGAAGGAAGATGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166018.4 |
||
| CDS-3UTR CCA 90 bp | TTCATGCTTTCTTTCACATCAGTTCTTCAAAGGTCCCCTGAAAGGCAGAGAAAGGGTGGTGGGTATCAGTaGCTCTGTGCACAGAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FMLSFTSVLQRSPERQRKGGGYQ*LCAQRG Trigger: TCCTCTCTGTGCACAGAGCCACTGATACCCACCACC...CTTTCTCTGCCTTTCAGGGGACCTTTGAAGAACTGATGTGAAAGAAAGCATGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166018.4 |
||
| CDS-3UTR CCA 90 bp | GCCATTGGCAAATCCCTGACAAGGATGGAAACAGCAGCAAAGCAGATGTATATTAAAATGACACGCGGATaGTGGGGAACATCCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AIGKSLTRMETAAKQMYIKMTRG*WGTSSC Trigger: GCAGGAGGATGTTCCCCACCATCCGCGTGTCATTTT...AATATACATCTGCTTTGCTGCTGTTTCCATCCTTGTCAGGGATTTGCCAATGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| CDS-3UTR CCA 90 bp | AAGGCAGAGAAAGTCATGTCATCTTCCTTCACATTTCTCCACTATAAGAGAATACACGTAGAGCCTGGCTaGCAGCGGGGGATCAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KAEKVMSSSFTFLHYKRIHVEPG*QRGISF Trigger: AAAGCTGATCCCCCGCTGCCAGCCAGGCTCTACGTG...TATTCTCTTATAGTGGAGAAATGTGAAGGAAGATGACATGACTTTCTCTGCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166018.4 |
||
| CDS-3UTR CCA 90 bp | GGGTCAAGTGACAGGGCACTCACATGGTGCTGTTTCTCTTGGGAGGTTTCTGTCTGTCTATTTTCAGCTTaGTTATCAGTTGGTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GSSDRALTWCCFSWEVSVCLFSA*LSVGSG Trigger: ACCAGAACCAACTGATAACCAAGCTGAAAATAGACA...GACAGAAACCTCCCAAGAGAAACAGCACCATGTGAGTGCCCTGTCACTTGACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR CAA 72 bp | AAACTAGCATCCCATGCTCAGACTGGGTATGGTACCTaGTTTCATAGACTGGACTTGGCCTTGGAATTCATC | + |
|
Preference number: 4 (lower is better) Translates to: KLASHAQTGYGT*FHRLDLALEFI Trigger: GATGAATTCCAAGGCCAAGTCCAGTCTATGAAACAAGGTACCATACCCAGTCTGAGCATGGGATGCTAGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR CAA 72 bp | AGGCCTGGTGTGTGGAAGATGACTAAGACCTTGAATTaGGCTAGTCCTACTTTGGTCAGCCCATTTGCTATA | + |
|
Preference number: 4 (lower is better) Translates to: RPGVWKMTKTLN*ASPTLVSPFAI Trigger: TATAGCAAATGGGCTGACCAAAGTAGGACTAGCCAAATTCAAGGTCTTAGTCATCTTCCACACACCAGGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| CDS-3UTR TCA 90 bp | AATATGCCTTTAACTACTTTGGGAAATGGTCCACAGGTTAAACATAGTCTCCATATAGGTGCGGATGGGTaGCCGGGCATAGGAATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NMPLTTLGNGPQVKHSLHIGADG*PGIGML Trigger: AAGCATTCCTATGCCCGGTCACCCATCCGCACCTAT...ATGGAGACTATGTTTAACCTGTGGACCATTTCCCAAAGTAGTTAAAGGCATATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| CDS-3UTR GCA 90 bp | AAGGCAGAGAAAGTCATGTCATCTTCCTTCACATTTCTCCACTATAAGAGAATATTTGATGGTGTTCTCTaGTGCCTCCTTCTCCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KAEKVMSSSFTFLHYKRIFDGVL*CLLLLG Trigger: CCCAAGGAGAAGGAGGCAGCAGAGAACACCATCAAA...TATTCTCTTATAGTGGAGAAATGTGAAGGAAGATGACATGACTTTCTCTGCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166018.4 |
||
| CDS-3UTR GCA 90 bp | AAGGCAGAGAAAGTCATGTCATCTTCCTTCACATTTCTCCACTATAAGAGAATAGTATCAGTGGCTCTGTaGACAGAGAGGATGAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: KAEKVMSSSFTFLHYKRIVSVAL*TERMRM Trigger: CATCCTCATCCTCTCTGTGCACAGAGCCACTGATAC...TATTCTCTTATAGTGGAGAAATGTGAAGGAAGATGACATGACTTTCTCTGCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166018.4 |
||
| CDS-3UTR CCA 90 bp | TCATGCTGTTTCTTAATTTGGCAGATGACATCAAGTGGCAGTATCATGTTTTATAAAATGACACGCGGATaGTGGGGAACATCCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SCCFLIWQMTSSGSIMFYKMTRG*WGTSSC Trigger: GCAGGAGGATGTTCCCCACCATCCGCGTGTCATTTT...ATAAAACATGATACTGCCACTTGATGTCATCTGCCAAATTAAGAAACAGCATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000166018.4 |
||
| 3UTR CAA 72 bp | AGGTGTGTGTGTCTGAAGTATATGGACATTACTCTTTaGAAGGACAGTGATAAAGGGTTGCTCTCCACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RCVCLKYMDITL*KDSDKGLLSTE Trigger: TTCAGTGGAGAGCAACCCTTTATCACTGTCCTTCAAAAGAGTAATGTCCATATACTTCAGACACACACACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| 3UTR CAA 72 bp | AAAGCAAAACAAGGTTACCTGGTATGCAGGCTAGTTTaGTGCCAATCTGGAGTCAATTGGAAAGAGAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: KAKQGYLVCRLV*CQSGVNWKERI Trigger: GATTCTCTCTTTCCAATTGACTCCAGATTGGCACAAAACTAGCCTGCATACCAGGTAACCTTGTTTTGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| CDS-3UTR CCA 90 bp | GATTGGATTACAGGTGACCTCATGTCTACTCAGTGTTTTCATGGGAACAAGAGATGTGAAAACTGTCTCTaGAAAGATGAACGTCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: DWITGDLMSTQCFHGNKRCENCL*KDERPE Trigger: TTCAGGACGTTCATCTTTCCAGAGACAGTTTTCACA...TCTCTTGTTCCCATGAAAACACTGAGTAGACATGAGGTCACCTGTAATCCAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| CDS-3UTR CCA 90 bp | TTCATGCTTTCTTTCACATCAGTTCTTCAAAGGTCCCCTGAAAGGCAGAGAAAGTGTGAAAACTGTCTCTaGAAAGATGAACGTCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: FMLSFTSVLQRSPERQRKCENCL*KDERPE Trigger: TTCAGGACGTTCATCTTTCCAGAGACAGTTTTCACA...CTTTCTCTGCCTTTCAGGGGACCTTTGAAGAACTGATGTGAAAGAAAGCATGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166018.4 |
||
| CDS-3UTR CCA 90 bp | TTTCTCCACTATAAGAGAATACTTGAGACTGGGCTCTCCATAAAGAAAAGATGTTCAGGACTATATACTTaGACTCAGGATCCACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLHYKRILETGLSIKKRCSGLYT*TQDPLQ Trigger: CTGGAGTGGATCCTGAGTCCAAGTATATAGTCCTGA...ACATCTTTTCTTTATGGAGAGCCCAGTCTCAAGTATTCTCTTATAGTGGAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166018.4 |
||
| 3UTR CAA 72 bp | GATCCATCTGGAGAGAGCTTCATGCTGTTTCTTAATTaGGCAGATGACATCAAGTGGCAGTATCATGTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: DPSGESFMLFLN*ADDIKWQYHVL Trigger: TAAAACATGATACTGCCACTTGATGTCATCTGCCAAATTAAGAAACAGCATGAAGCTCTCTCCAGATGGATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166018.4 |
||
| CDS-3UTR CCA 90 bp | TGTCATCTTCCTTCACATTTCTCCACTATAAGAGAATACTTGAGACTGGGCTCTTGTCTATTTTCAGCTTaGTTATCAGTTGGTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CHLPSHFSTIREYLRLGSCLFSA*LSVGSG Trigger: ACCAGAACCAACTGATAACCAAGCTGAAAATAGACA...AGAGCCCAGTCTCAAGTATTCTCTTATAGTGGAGAAATGTGAAGGAAGATGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166018.4 |
||
| 3UTR CAA 72 bp | AAGATGACTAAGACCTTGAATTTGGCTAGTCCTACTTaGGTCAGCCCATTTGCTATAACATCACTACGTATA | + |
|
Preference number: 4 (lower is better) Translates to: KMTKTLNLASPT*VSPFAITSLRI Trigger: TATACGTAGTGATGTTATAGCAAATGGGCTGACCAAAGTAGGACTAGCCAAATTCAAGGTCTTAGTCATCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| CDS TCA 90 bp | AGAGAGGATGAGGATGGGCTGCCGCCCCCGCCGCCAAACTCCGCGTaGGCATCCAGACTCGTCAGCTCACCCAGTGGCTGGGCACATGAT | + |
|
Preference number: 5 (lower is better) Translates to: REDEDGLPPPPPNSA*ASRLVSSPSGWAHD Trigger: ATCATGTGCCCAGCCACTGGGTGAGCTGACGAGTCTGGATGCTCACGCGGAGTTTGGCGGCGGGGGCGGCAGCCCATCCTCATCCTCTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052946.12 ENSMUST00000166018.4 |
||
| CDS TCA 90 bp | GATGATGGGGGTGGTGGGTATCAGTGGCTCTGTGCACAGAGAGGATaGGGATGGGCTGCCGCCCCCGCCGCCAAACTCCGCGTGAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: DDGGGGYQWLCAQRG*GWAAAPAAKLRVSI Trigger: GATGCTCACGCGGAGTTTGGCGGCGGGGGCGGCAGCCCATCCTCATCCTCTCTGTGCACAGAGCCACTGATACCCACCACCCCCATCATC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000052946.12 ENSMUST00000166018.4 |
||
| CDS GCA 90 bp | TGGTGGGTATCAGTGGCTCTGTGCACAGAGAGGATGAGGATGGGCTaGCGCCCCCGCCGCCAAACTCCGCGTGAGCATCCAGACTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: WWVSVALCTERMRMG*RPRRQTPREHPDSS Trigger: TGACGAGTCTGGATGCTCACGCGGAGTTTGGCGGCGGGGGCGGCAGCCCATCCTCATCCTCTCTGTGCACAGAGCCACTGATACCCACCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052946.12 ENSMUST00000166018.4 |
||
| CDS CCA 90 bp | AGACACCATCTGTTTGAGGAGCTGCTCGCCAGTAAAGGGGGAGTCTaGGTGCACGTAGAGCCTGGCTGGCAGCGGGGGATCAGCTTTGCN | + |
|
Preference number: 5 (lower is better) Translates to: RHHLFEELLASKGGV*VHVEPGWQRGISFA Trigger: NGCAAAGCTGATCCCCCGCTGCCAGCCAGGCTCTACGTGCACCCAGACTCCCCCTTTACTGGCGAGCAGCTCCTCAAACAGATGGTGTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000215802.2 |
||
| CDS-3UTR CAA 90 bp | ATACAGGTGGGAGGAGGAGGATGGAAGGTGTCCTTTTCCATTACCCTCCAGCTCGCGATGGAGAAGGCATaGGCTCGAGAGGAGAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: IQVGGGGWKVSFSITLQLAMEKA*AREESW Trigger: CCAGCTCTCCTCTCGAGCCAATGCCTTCTCCATCGC...GAGCTGGAGGGTAATGGAAAAGGACACCTTCCATCCTCCTCCTCCCACCTGTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
||
| CDS-3UTR CAA 90 bp | GACAGATTCATTTTCCCTTTTCTTCTGGGAAGAAGTATGCTGTGTGGAGAAGTCGAGGAGAGCTGGGGCTaGGGCGACGCCGTGAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: DRFIFPFLLGRSMLCGEVEESWG*GDAVNS Trigger: GGAGTTCACGGCGTCGCCCAAGCCCCAGCTCTCCTC...GACTTCTCCACACAGCATACTTCTTCCCAGAAGAAAAGGGAAAATGAATCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| CDS-3UTR CAA 90 bp | GGGTCAAGTGACAGGGCACTCACATGGTGCTGTTTCTCTTGGGAGGTTTCTGTCTCTTCTGACTTCAGATaGAGCAAGGAGGCCGTGTGG | + |
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Preference number: 5 (lower is better) Translates to: GSSDRALTWCCFSWEVSVSSDFR*SKEAVW Trigger: CCACACGGCCTCCTTGCTCAATCTGAAGTCAGAAGA...GACAGAAACCTCCCAAGAGAAACAGCACCATGTGAGTGCCCTGTCACTTGACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| CDS-3UTR CAA 90 bp | GGGTCAAGTGACAGGGCACTCACATGGTGCTGTTTCTCTTGGGAGGTTTCTGTCGAGTCCCGGAATCCTTaGGCAAACGGATTGCTGTCT | + |
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Preference number: 5 (lower is better) Translates to: GSSDRALTWCCFSWEVSVESRNP*ANGLLS Trigger: AGACAGCAATCCGTTTGCCAAAGGATTCCGGGACTC...GACAGAAACCTCCCAAGAGAAACAGCACCATGTGAGTGCCCTGTCACTTGACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| CDS-3UTR CAA 90 bp | CTCATGGTTTTAAGAAGCAAAACATCCAAGATTCAGGCTCACTCTCCTAGGGCCGCGATGGAGAAGGCATaGGCTCGAGAGGAGAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: LMVLRSKTSKIQAHSPRAAMEKA*AREESW Trigger: CCAGCTCTCCTCTCGAGCCAATGCCTTCTCCATCGC...GGCCCTAGGAGAGTGAGCCTGAATCTTGGATGTTTTGCTTCTTAAAACCATGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166018.4 |
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| CDS TCA 90 bp | GTCCATCAGGACTATATACTTGGACTCAGGATCCACTCCAGAAAATaGCACGCGGATGGTGGGGAACATCCTCCTGCCAGACTTGGTGAT | + |
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Preference number: 5 (lower is better) Translates to: VHQDYILGLRIHSRK*HADGGEHPPARLGD Trigger: ATCACCAAGTCTGGCAGGAGGATGTTCCCCACCATCCGCGTGTCATTTTCTGGAGTGGATCCTGAGTCCAAGTATATAGTCCTGATGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052946.12 ENSMUST00000166018.4 |
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| CDS-3UTR CAA 90 bp | AAGAGAATACTTGAGACTGGGCTCTCCATAAAGAAAAGATGTTCATTTGTCTCAGAGGAGAGCTGGGGCTaGGGCGACGCCGTGAACTCC | + |
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Preference number: 5 (lower is better) Translates to: KRILETGLSIKKRCSFVSEESWG*GDAVNS Trigger: GGAGTTCACGGCGTCGCCCAAGCCCCAGCTCTCCTC...TGAGACAAATGAACATCTTTTCTTTATGGAGAGCCCAGTCTCAAGTATTCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166018.4 |
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| CDS-3UTR CAA 90 bp | CCGAACAGAGAACGCACAAGATTTCTTATACTTACAACATTTCTAGTAAGTGTGGCTGCCTCCTTCTCCTaGGGGCCGCCGCTGGACATA | + |
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Preference number: 5 (lower is better) Translates to: PNRERTRFLILTTFLVSVAASFS*GPPLDI Trigger: TATGTCCAGCGGCGGCCCCAAGGAGAAGGAGGCAGC...CACACTTACTAGAAATGTTGTAAGTATAAGAAATCTTGTGCGTTCTCTGTTCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| CDS-3UTR CAA 90 bp | ACAGTCAGACTGGAGAAACCCACTACAGGGCATGTACATGCCCATAAGCATACAAAAGACACCATCTGTTaGAGGAGCTGCTCGCCAGTA | + |
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Preference number: 5 (lower is better) Translates to: TVRLEKPTTGHVHAHKHTKDTIC*RSCSPV Trigger: TACTGGCGAGCAGCTCCTCAAACAGATGGTGTCTTT...TGTATGCTTATGGGCATGTACATGCCCTGTAGTGGGTTTCTCCAGTCTGACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| CDS-3UTR CAA 90 bp | GCCATTGGCAAATCCCTGACAAGGATGGAAACAGCAGCAAAGCAGATGTATATTCAGCTTGGTTATCAGTaGGTTCTGGTAGGCTGTGAC | + |
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Preference number: 5 (lower is better) Translates to: AIGKSLTRMETAAKQMYIQLGYQ*VLVGCD Trigger: GTCACAGCCTACCAGAACCAACTGATAACCAAGCTG...AATATACATCTGCTTTGCTGCTGTTTCCATCCTTGTCAGGGATTTGCCAATGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| CDS-3UTR CAA 90 bp | CATCTGGAGAGAGCTTCATGCTGTTTCTTAATTTGGCAGATGACATCAAGTGGCCAGCTTGGTTATCAGTaGGTTCTGGTAGGCTGTGAC | + |
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Preference number: 5 (lower is better) Translates to: HLERASCCFLIWQMTSSGQLGYQ*VLVGCD Trigger: GTCACAGCCTACCAGAACCAACTGATAACCAAGCTG...GCCACTTGATGTCATCTGCCAAATTAAGAAACAGCATGAAGCTCTCTCCAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166018.4 |
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| CDS-3UTR CAA 90 bp | TGTCTCATGGTTTTAAGAAGCAAAACATCCAAGATTCAGGCTCACTCTCCTAGGGAGTCCCGGAATCCTTaGGCAAACGGATTGCTGTCT | + |
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Preference number: 5 (lower is better) Translates to: CLMVLRSKTSKIQAHSPRESRNP*ANGLLS Trigger: AGACAGCAATCCGTTTGCCAAAGGATTCCGGGACTC...CCTAGGAGAGTGAGCCTGAATCTTGGATGTTTTGCTTCTTAAAACCATGAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166018.4 |
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| CDS-3UTR CAA 90 bp | GACAGATTCATTTTCCCTTTTCTTCTGGGAAGAAGTATGCTGTGTGGAGAAGTCATCCTCGACTCTGAGTaGTTTGACTCTCCTCCCCCA | + |
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Preference number: 5 (lower is better) Translates to: DRFIFPFLLGRSMLCGEVILDSE*FDSPPP Trigger: TGGGGGAGGAGAGTCAAACAACTCAGAGTCGAGGAT...GACTTCTCCACACAGCATACTTCTTCCCAGAAGAAAAGGGAAAATGAATCTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| CDS-3UTR CAA 90 bp | CATCTGTATTTTGTCTGGAAACCAACTACCTGTGGATACTACTACAAGGCACACAATTGTTCCAGGGGTTaGATGGTGTTCTCTGCTGCC | + |
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Preference number: 5 (lower is better) Translates to: HLYFVWKPTTCGYYYKAHNCSRG*MVFSAA Trigger: GGCAGCAGAGAACACCATCAAACCCCTGGAACAATT...GTGTGCCTTGTAGTAGTATCCACAGGTAGTTGGTTTCCAGACAAAATACAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| CDS-3UTR CAA 90 bp | TTCATGCTTTCTTTCACATCAGTTCTTCAAAGGTCCCCTGAAAGGCAGAGAAAGAATTGTTCCAGGGGTTaGATGGTGTTCTCTGCTGCC | + |
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Preference number: 5 (lower is better) Translates to: FMLSFTSVLQRSPERQRKNCSRG*MVFSAA Trigger: GGCAGCAGAGAACACCATCAAACCCCTGGAACAATT...CTTTCTCTGCCTTTCAGGGGACCTTTGAAGAACTGATGTGAAAGAAAGCATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166018.4 |
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| CDS-3UTR CAA 90 bp | GGCCATAATGTGGTAAAGAAAGCAAGACAATATGTCAAGGAAGATGGGTCTATTTCTTCTGACTTCAGATaGAGCAAGGAGGCCGTGTGG | + |
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Preference number: 5 (lower is better) Translates to: GHNVVKKARQYVKEDGSISSDFR*SKEAVW Trigger: CCACACGGCCTCCTTGCTCAATCTGAAGTCAGAAGA...AATAGACCCATCTTCCTTGACATATTGTCTTGCTTTCTTTACCACATTATGGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166018.4 |
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| CDS-3UTR CAA 90 bp | CATCTGTATTTTGTCTGGAAACCAACTACCTGTGGATACTACTACAAGGCACACATCAGGACTATATACTaGGACTCAGGATCCACTCCA | + |
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Preference number: 5 (lower is better) Translates to: HLYFVWKPTTCGYYYKAHIRTIY*DSGSTP Trigger: TGGAGTGGATCCTGAGTCCAAGTATATAGTCCTGAT...GTGTGCCTTGTAGTAGTATCCACAGGTAGTTGGTTTCCAGACAAAATACAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| CDS-3UTR CAA 90 bp | TGTCTCATGGTTTTAAGAAGCAAAACATCCAAGATTCAGGCTCACTCTCCTAGGATCAGGACTATATACTaGGACTCAGGATCCACTCCA | + |
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Preference number: 5 (lower is better) Translates to: CLMVLRSKTSKIQAHSPRIRTIY*DSGSTP Trigger: TGGAGTGGATCCTGAGTCCAAGTATATAGTCCTGAT...CCTAGGAGAGTGAGCCTGAATCTTGGATGTTTTGCTTCTTAAAACCATGAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166018.4 |
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| CDS-3UTR CAA 90 bp | GCAGAGAAAGTCATGTCATCTTCCTTCACATTTCTCCACTATAAGAGAATACTTAAAGACACCATCTGTTaGAGGAGCTGCTCGCCAGTA | + |
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Preference number: 5 (lower is better) Translates to: AEKVMSSSFTFLHYKRILKDTIC*RSCSPV Trigger: TACTGGCGAGCAGCTCCTCAAACAGATGGTGTCTTT...AAGTATTCTCTTATAGTGGAGAAATGTGAAGGAAGATGACATGACTTTCTCTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166018.4 |
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| CDS-3UTR CAA 90 bp | GACAGATTCATTTTCCCTTTTCTTCTGGGAAGAAGTATGCTGTGTGGAGAAGTCCTGTCTATTTTCAGCTaGGTTATCAGTTGGTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: DRFIFPFLLGRSMLCGEVLSIFS*VISWFW Trigger: CCAGAACCAACTGATAACCAAGCTGAAAATAGACAG...GACTTCTCCACACAGCATACTTCTTCCCAGAAGAAAAGGGAAAATGAATCTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| CDS-3UTR CAA 90 bp | TTTCTTTCACATCAGTTCTTCAAAGGTCCCCTGAAAGGCAGAGAAAGTCATGTCCTGTCTATTTTCAGCTaGGTTATCAGTTGGTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: FLSHQFFKGPLKGRESHVLSIFS*VISWFW Trigger: CCAGAACCAACTGATAACCAAGCTGAAAATAGACAG...GACATGACTTTCTCTGCCTTTCAGGGGACCTTTGAAGAACTGATGTGAAAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166018.4 |
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| CDS TCA 72 bp | GAGGATGGGCTGCCGCCCCCGCCGCCAAACTCCGCGTaGGCATCCAGACTCGTCAGCTCACCCAGTGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: EDGLPPPPPNSA*ASRLVSSPSGW Trigger: CCAGCCACTGGGTGAGCTGACGAGTCTGGATGCTCACGCGGAGTTTGGCGGCGGGGGCGGCAGCCCATCCTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052946.12 ENSMUST00000166018.4 |
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| CDS CAA 72 bp | CCGCCGCTGGACATAAGCGCGGCGATGGAGAAGGCATaGGCTCGAGAGGAGAGCTGGGGCTTGGGCGACGCC | + |
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Preference number: 6 (lower is better) Translates to: PPLDISAAMEKA*AREESWGLGDA Trigger: GGCGTCGCCCAAGCCCCAGCTCTCCTCTCGAGCCAATGCCTTCTCCATCGCCGCGCTTATGTCCAGCGGCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052946.12 ENSMUST00000166018.4 |
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| CDS CAA 90 bp | TCCTTGGGGCCGCCGCTGGACATAAGCGCGGCGATGGAGAAGGCATaGGCTCGAGAGGAGAGCTGGGGCTTGGGCGACGCCGTGAACTCC | + |
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Preference number: 6 (lower is better) Translates to: SLGPPLDISAAMEKA*AREESWGLGDAVNS Trigger: GGAGTTCACGGCGTCGCCCAAGCCCCAGCTCTCCTCTCGAGCCAATGCCTTCTCCATCGCCGCGCTTATGTCCAGCGGCGGCCCCAAGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052946.12 ENSMUST00000166018.4 |
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| CDS TCA 72 bp | GGTGGTGGGTATCAGTGGCTCTGTGCACAGAGAGGATaGGGATGGGCTGCCGCCCCCGCCGCCAAACTCCGC | + |
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Preference number: 6 (lower is better) Translates to: GGGYQWLCAQRG*GWAAAPAAKLR Trigger: GCGGAGTTTGGCGGCGGGGGCGGCAGCCCATCCTCATCCTCTCTGTGCACAGAGCCACTGATACCCACCACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052946.12 ENSMUST00000166018.4 |
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| CDS CAA 72 bp | AGGGGTTTGATGGTGTTCTCTGCTGCCTCCTTCTCCTaGGGGCCGCCGCTGGACATAAGCGCGGCGATGGAG | + |
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Preference number: 6 (lower is better) Translates to: RGLMVFSAASFS*GPPLDISAAME Trigger: CTCCATCGCCGCGCTTATGTCCAGCGGCGGCCCCAAGGAGAAGGAGGCAGCAGAGAACACCATCAAACCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052946.12 ENSMUST00000166018.4 |
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| CDS CCA 72 bp | CCTCCCCCAGAACATCCTCTTCCCCATAGGTGCGGATaGGTGACCGGGCATAGGAATGCTTCTGGATCAGGC | + |
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Preference number: 6 (lower is better) Translates to: PPPEHPLPHRCG*VTGHRNASGSG Trigger: GCCTGATCCAGAAGCATTCCTATGCCCGGTCACCCATCCGCACCTATGGGGAAGAGGATGTTCTGGGGGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052946.12 |
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| CDS CAA 90 bp | AATTGTTCCAGGGGTTTGATGGTGTTCTCTGCTGCCTCCTTCTCCTaGGGGCCGCCGCTGGACATAAGCGCGGCGATGGAGAAGGCATTG | + |
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Preference number: 6 (lower is better) Translates to: NCSRGLMVFSAASFS*GPPLDISAAMEKAL Trigger: CAATGCCTTCTCCATCGCCGCGCTTATGTCCAGCGGCGGCCCCAAGGAGAAGGAGGCAGCAGAGAACACCATCAAACCCCTGGAACAATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052946.12 ENSMUST00000166018.4 |
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| CDS GCA 72 bp | CTCCACAAATTGTTCCAGGGGTTTGATGGTGTTCTCTaGTGCCTCCTTCTCCTTGGGGCCGCCGCTGGACAT | + |
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Preference number: 6 (lower is better) Translates to: LHKLFQGFDGVL*CLLLLGAAAGH Trigger: ATGTCCAGCGGCGGCCCCAAGGAGAAGGAGGCAGCAGAGAACACCATCAAACCCCTGGAACAATTTGTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052946.12 ENSMUST00000166018.4 |
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| CDS GCA 72 bp | CACAAATTGTTCCAGGGGTTTGATGGTGTTCTCTGCTaGCTCCTTCTCCTTGGGGCCGCCGCTGGACATAAG | + |
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Preference number: 6 (lower is better) Translates to: HKLFQGFDGVLC*LLLLGAAAGHK Trigger: CTTATGTCCAGCGGCGGCCCCAAGGAGAAGGAGGCAGCAGAGAACACCATCAAACCCCTGGAACAATTTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052946.12 ENSMUST00000166018.4 |
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| CDS TCA 72 bp | GACTATATACTTGGACTCAGGATCCACTCCAGAAAATaGCACGCGGATGGTGGGGAACATCCTCCTGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: DYILGLRIHSRK*HADGGEHPPAR Trigger: TCTGGCAGGAGGATGTTCCCCACCATCCGCGTGTCATTTTCTGGAGTGGATCCTGAGTCCAAGTATATAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052946.12 ENSMUST00000166018.4 |
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| CDS TCA 72 bp | CACATGATGATTTCTCCACAAATTGTTCCAGGGGTTTaGTGGTGTTCTCTGCTGCCTCCTTCTCCTTGGGGC | + |
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Preference number: 6 (lower is better) Translates to: HMMISPQIVPGV*WCSLLPPSPWG Trigger: GCCCCAAGGAGAAGGAGGCAGCAGAGAACACCATCAAACCCCTGGAACAATTTGTGGAGAAATCATCATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052946.12 ENSMUST00000166018.4 |
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