Pregenerated sensors for TBX19 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026572Ensembl transcript IDs: ENSMUST00000027859.12, ENSMUST00000161144.2
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCACCTACGGTAATCAAGGCACAGTACCAGGGGCTATGGGCACGATaGGGAGGGCTAGCTCTCACCCTCATGAGGCTCACAGTCTATGAG | + |
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Preference number: 1 (lower is better) Translates to: APTVIKAQYQGLWAR*GGLALTLMRLTVYE Trigger: CTCATAGACTGTGAGCCTCATGAGGGTGAGAGCTAGCCCTCCTCATCGTGCCCATAGCCCCTGGTACTGTGCCTTGATTACCGTAGGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| 3UTR TCA 90 bp | TGGGCATCACCATGCACCGCTCCAGGCCTCTGGCTCAAGAGACCCTaGTGCTCAACTCTCTGGAATCATCAGATTAGGTTGCTATGGACA | + |
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Preference number: 1 (lower is better) Translates to: WASPCTAPGLWLKRP*CSTLWNHQIRLLWT Trigger: TGTCCATAGCAACCTAATCTGATGATTCCAGAGAGTTGAGCATCAGGGTCTCTTGAGCCAGAGGCCTGGAGCGGTGCATGGTGATGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| 3UTR GCA 90 bp | CTGGCCAAGCAGGTACAATTCACACAGGTGGGACAGGAGAGGGGATaGTTCAAGCACAGGAAGCAAGTGTTCAGAGTAAGGAGAGCTGTC | + |
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Preference number: 1 (lower is better) Translates to: LAKQVQFTQVGQERG*FKHRKQVFRVRRAV Trigger: GACAGCTCTCCTTACTCTGAACACTTGCTTCCTGTGCTTGAAGCATCCCCTCTCCTGTCCCACCTGTGTGAATTGTACCTGCTTGGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| 3UTR CCA 90 bp | TGGCCTTTCAACCAGTCCTGGCCAAGCAGGTACAATTCACACAGGTaGGACAGGAGAGGGGATGCTTCAAGCACAGGAAGCAAGTGTTCA | + |
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Preference number: 1 (lower is better) Translates to: WPFNQSWPSRYNSHR*DRRGDASSTGSKCS Trigger: TGAACACTTGCTTCCTGTGCTTGAAGCATCCCCTCTCCTGTCCCACCTGTGTGAATTGTACCTGCTTGGCCAGGACTGGTTGAAAGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| 3UTR GCA 90 bp | TCAAGAGACCCTGATGCTCAACTCTCTGGAATCATCAGATTAGGTTaGTATGGACACAAATACAGACAGTTCTCTACTGGCAGCAGCTCC | + |
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Preference number: 1 (lower is better) Translates to: SRDPDAQLSGIIRLG*YGHKYRQFSTGSSS Trigger: GGAGCTGCTGCCAGTAGAGAACTGTCTGTATTTGTGTCCATAGCAACCTAATCTGATGATTCCAGAGAGTTGAGCATCAGGGTCTCTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| 3UTR-3UTR TCA 90 bp | GGCACAGTACCAGGGGCTATGGGCACGATGAGGAGGGCTAGCTCTCACCCTCATTCCATAGGCAAAATTTaGGCTCTCCTCAAAACCATG | + |
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Preference number: 2 (lower is better) Translates to: GTVPGAMGTMRRASSHPHSIGKI*ALLKTM Trigger: CATGGTTTTGAGGAGAGCTCAAATTTTGCCTATGGA...ATGAGGGTGAGAGCTAGCCCTCCTCATCGTGCCCATAGCCCCTGGTACTGTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| 3UTR-3UTR TCA 90 bp | GTGGGACAGGAGAGGGGATGCTTCAAGCACAGGAAGCAAGTGTTCAGAGTAAGGCTCAGCCTCATTTCCTaGCTTCCCAGCACACTTCTG | + |
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Preference number: 2 (lower is better) Translates to: VGQERGCFKHRKQVFRVRLSLIS*LPSTLL Trigger: CAGAAGTGTGCTGGGAAGTCAGGAAATGAGGCTGAG...CCTTACTCTGAACACTTGCTTCCTGTGCTTGAAGCATCCCCTCTCCTGTCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| 3UTR-3UTR CCA 90 bp | CCTAAGCGTGGCCAAGATAAATCAACTCAGAGAAAGCAGGAGAGCCACAGGAAACAGACAGTTCTCTACTaGCAGCAGCTCCTAGGATCC | + |
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Preference number: 2 (lower is better) Translates to: PKRGQDKSTQRKQESHRKQTVLY*QQLLGS Trigger: GGATCCTAGGAGCTGCTGCCAGTAGAGAACTGTCTG...TTTCCTGTGGCTCTCCTGCTTTCTCTGAGTTGATTTATCTTGGCCACGCTTAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| 3UTR-3UTR CCA 90 bp | GAGATAAGCCAAACATCACCTCAGGTGATTGACAGCAGAGTGGCCTTTCAACCATACAATTCACACAGGTaGGACAGGAGAGGGGATGCT | + |
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Preference number: 2 (lower is better) Translates to: EISQTSPQVIDSRVAFQPYNSHR*DRRGDA Trigger: AGCATCCCCTCTCCTGTCCCACCTGTGTGAATTGTA...TGGTTGAAAGGCCACTCTGCTGTCAATCACCTGAGGTGATGTTTGGCTTATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| 3UTR-3UTR CCA 90 bp | TCCTGGCCAAGCAGGTACAATTCACACAGGTGGGACAGGAGAGGGGATGCTTCACAGATTAGGTTGCTATaGACACAAATACAGACAGTT | + |
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Preference number: 2 (lower is better) Translates to: SWPSRYNSHRWDRRGDASQIRLL*TQIQTV Trigger: AACTGTCTGTATTTGTGTCCATAGCAACCTAATCTG...TGAAGCATCCCCTCTCCTGTCCCACCTGTGTGAATTGTACCTGCTTGGCCAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| 3UTR-3UTR CCA 90 bp | CGCAGAAATATAAGGCAGAATGAGGCGAGCTCTATGCCTGAGGTAAAAATAGAGTTTCTGGGAGGCTTTTaGGCATCACCATGCACCGCT | + |
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Preference number: 2 (lower is better) Translates to: RRNIRQNEASSMPEVKIEFLGGF*ASPCTA Trigger: AGCGGTGCATGGTGATGCCCAAAAGCCTCCCAGAAA...CTCTATTTTTACCTCAGGCATAGAGCTCGCCTCATTCTGCCTTATATTTCTGCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| 3UTR-3UTR TCA 90 bp | GAGATAAGCCAAACATCACCTCAGGTGATTGACAGCAGAGTGGCCTTTCAACCAAGCCACAGGAAATGGTaGGAGACACAAGTAGTAACA | + |
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Preference number: 2 (lower is better) Translates to: EISQTSPQVIDSRVAFQPSHRKW*ETQVVT Trigger: TGTTACTACTTGTGTCTCTCACCATTTCCTGTGGCT...TGGTTGAAAGGCCACTCTGCTGTCAATCACCTGAGGTGATGTTTGGCTTATCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| 3UTR CAA 90 bp | TTCCCAGCACACTTCTGTGAGCAACACGTTAGTACTAGCTTGCTGTaGTTAACTTTATGGCCTCTCATCTTCTCTAGGTCTCAACGCAGA | + |
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Preference number: 2 (lower is better) Translates to: FPAHFCEQHVSTSLL*LTLWPLIFSRSQRR Trigger: TCTGCGTTGAGACCTAGAGAAGATGAGAGGCCATAAAGTTAACAACAGCAAGCTAGTACTAACGTGTTGCTCACAGAAGTGTGCTGGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| 3UTR-3UTR GCA 90 bp | TTTCAACCAGTCCTGGCCAAGCAGGTACAATTCACACAGGTGGGACAGGAGAGGATCATCAGATTAGGTTaGTATGGACACAAATACAGA | + |
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Preference number: 2 (lower is better) Translates to: FQPVLAKQVQFTQVGQERIIRLG*YGHKYR Trigger: TCTGTATTTGTGTCCATAGCAACCTAATCTGATGAT...CCTCTCCTGTCCCACCTGTGTGAATTGTACCTGCTTGGCCAGGACTGGTTGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| 3UTR-3UTR CAA 90 bp | GGCACAGTACCAGGGGCTATGGGCACGATGAGGAGGGCTAGCTCTCACCCTCATTTTTCTGGGAGGCTTTaGGGCATCACCATGCACCGC | + |
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Preference number: 3 (lower is better) Translates to: GTVPGAMGTMRRASSHPHFSGRL*GITMHR Trigger: GCGGTGCATGGTGATGCCCAAAAGCCTCCCAGAAAA...ATGAGGGTGAGAGCTAGCCCTCCTCATCGTGCCCATAGCCCCTGGTACTGTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| 3UTR CCA 72 bp | AACCAGTCCTGGCCAAGCAGGTACAATTCACACAGGTaGGACAGGAGAGGGGATGCTTCAAGCACAGGAAGC | + |
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Preference number: 3 (lower is better) Translates to: NQSWPSRYNSHR*DRRGDASSTGS Trigger: GCTTCCTGTGCTTGAAGCATCCCCTCTCCTGTCCCACCTGTGTGAATTGTACCTGCTTGGCCAGGACTGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| 3UTR TCA 72 bp | CCATGCACCGCTCCAGGCCTCTGGCTCAAGAGACCCTaGTGCTCAACTCTCTGGAATCATCAGATTAGGTTG | + |
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Preference number: 3 (lower is better) Translates to: PCTAPGLWLKRP*CSTLWNHQIRL Trigger: CAACCTAATCTGATGATTCCAGAGAGTTGAGCATCAGGGTCTCTTGAGCCAGAGGCCTGGAGCGGTGCATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| 3UTR TCA 72 bp | GCTGAAAGGTTAACAGGAGCCTTGAGCGGAGGGTGCTaGAAGGTTAACAGGAGTCAACGCCAGAGGCATGGA | + |
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Preference number: 3 (lower is better) Translates to: AERLTGALSGGC*KVNRSQRQRHG Trigger: TCCATGCCTCTGGCGTTGACTCCTGTTAACCTTTCAGCACCCTCCGCTCAAGGCTCCTGTTAACCTTTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| 3UTR TCA 72 bp | GGGGACAGAGATAAGCCAAACATCACCTCAGGTGATTaGCAGCAGAGTGGCCTTTCAACCAGTCCTGGCCAA | + |
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Preference number: 3 (lower is better) Translates to: GDRDKPNITSGD*QQSGLSTSPGQ Trigger: TTGGCCAGGACTGGTTGAAAGGCCACTCTGCTGTCAATCACCTGAGGTGATGTTTGGCTTATCTCTGTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| 3UTR GCA 72 bp | CAGGTACAATTCACACAGGTGGGACAGGAGAGGGGATaGTTCAAGCACAGGAAGCAAGTGTTCAGAGTAAGG | + |
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Preference number: 3 (lower is better) Translates to: QVQFTQVGQERG*FKHRKQVFRVR Trigger: CCTTACTCTGAACACTTGCTTCCTGTGCTTGAAGCATCCCCTCTCCTGTCCCACCTGTGTGAATTGTACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| 3UTR TCA 72 bp | AGGGCTAGCTCTCACCCTCATGAGGCTCACAGTCTATaGGGGAGACAGATACACTCGCAGAAATATAAGGCA | + |
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Preference number: 3 (lower is better) Translates to: RASSHPHEAHSL*GRQIHSQKYKA Trigger: TGCCTTATATTTCTGCGAGTGTATCTGTCTCCCTCATAGACTGTGAGCCTCATGAGGGTGAGAGCTAGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| 3UTR CCA 72 bp | GAGCAACGCCAAATGGTAGAGGCTGTCTTTAGAATATaGGGTCATCGAACTTCATTCTGTAGGCAATGGGAG | + |
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Preference number: 3 (lower is better) Translates to: EQRQMVEAVFRI*GHRTSFCRQWE Trigger: CTCCCATTGCCTACAGAATGAAGTTCGATGACCCCATATTCTAAAGACAGCCTCTACCATTTGGCGTTGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS-3UTR TCA 90 bp | AGTAAGGAGAGCTGTCTGCCTCGAGCGGAGGGTGCTGAAAGGTTAACAGGAGCCGCCTGGGAGGGGGTGTaGGGCCACGGCTGTCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: SKESCLPRAEGAERLTGAAWEGV*GHGCPG Trigger: ACCTGGACAGCCGTGGCCTCACACCCCCTCCCAGGC...GGCTCCTGTTAACCTTTCAGCACCCTCCGCTCGAGGCAGACAGCTCTCCTTACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS-3UTR CCA 90 bp | AGTAAGGAGAGCTGTCTGCCTCGAGCGGAGGGTGCTGAAAGGTTAACAGGAGCCAAGTGGTCGCTTGGGTaGGGAGCAAAGAGGAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: SKESCLPRAEGAERLTGAKWSLG*GAKRKV Trigger: CACCTTCCTCTTTGCTCCCCACCCAAGCGACCACTT...GGCTCCTGTTAACCTTTCAGCACCCTCCGCTCGAGGCAGACAGCTCTCCTTACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS-3UTR TCA 90 bp | TCCTGGCCAAGCAGGTACAATTCACACAGGTGGGACAGGAGAGGGGATGCTTCAAAGGAGAATTGTTCCTaGGGTGCTGGCGTGCACCTC | + |
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Preference number: 4 (lower is better) Translates to: SWPSRYNSHRWDRRGDASKENCS*GAGVHL Trigger: GAGGTGCACGCCAGCACCTCAGGAACAATTCTCCTT...TGAAGCATCCCCTCTCCTGTCCCACCTGTGTGAATTGTACCTGCTTGGCCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS-3UTR CCA 90 bp | TCCTGGCCAAGCAGGTACAATTCACACAGGTGGGACAGGAGAGGGGATGCTTCATGCTGGCATGGGGTGTaGAGGATAAGGAAGTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: SWPSRYNSHRWDRRGDASCWHGV*RIRKSS Trigger: GCTGGACTTCCTTATCCTCCACACCCCATGCCAGCA...TGAAGCATCCCCTCTCCTGTCCCACCTGTGTGAATTGTACCTGCTTGGCCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS-3UTR CCA 90 bp | CAGGAAGCAAGTGTTCAGAGTAAGGAGAGCTGTCTGCCTCGAGCGGAGGGTGCTATTGGGCCATTGCTGTaGGGTACAGACAGGATGCTG | + |
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Preference number: 4 (lower is better) Translates to: QEASVQSKESCLPRAEGAIGPLL*GTDRML Trigger: CAGCATCCTGTCTGTACCCCACAGCAATGGCCCAAT...AGCACCCTCCGCTCGAGGCAGACAGCTCTCCTTACTCTGAACACTTGCTTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS-3UTR TCA 90 bp | CAGGAAGCAAGTGTTCAGAGTAAGGAGAGCTGTCTGCCTCGAGCGGAGGGTGCTGAGCATCCTCCAGGATaGTCTGAAGTTGCTTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: QEASVQSKESCLPRAEGAEHPPG*SEVASL Trigger: CAGAGAAGCAACTTCAGATCATCCTGGAGGATGCTC...AGCACCCTCCGCTCGAGGCAGACAGCTCTCCTTACTCTGAACACTTGCTTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS-3UTR GCA 90 bp | GGCACAGTACCAGGGGCTATGGGCACGATGAGGAGGGCTAGCTCTCACCCTCATGGTCCCGAGAAAACTTaGAGATTGTTGCTTGAGCTT | + |
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Preference number: 4 (lower is better) Translates to: GTVPGAMGTMRRASSHPHGPEKT*RLLLEL Trigger: AAGCTCAAGCAACAATCTGCAAGTTTTCTCGGGACC...ATGAGGGTGAGAGCTAGCCCTCCTCATCGTGCCCATAGCCCCTGGTACTGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS-3UTR TCA 90 bp | CCTAAGCGTGGCCAAGATAAATCAACTCAGAGAAAGCAGGAGAGCCACAGGAAAACGTACTTCCAGCGGTaGCTGTCGGTCCGGACGAAG | + |
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Preference number: 4 (lower is better) Translates to: PKRGQDKSTQRKQESHRKTYFQR*LSVRTK Trigger: CTTCGTCCGGACCGACAGTCACCGCTGGAAGTACGT...TTTCCTGTGGCTCTCCTGCTTTCTCTGAGTTGATTTATCTTGGCCACGCTTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS-3UTR TCA 90 bp | CGCAGAAATATAAGGCAGAATGAGGCGAGCTCTATGCCTGAGGTAAAAATAGAGGGCTGGGCCCTGGGTTaGTTGGGCCATTGCTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: RRNIRQNEASSMPEVKIEGWALG*LGHCCG Trigger: CCCACAGCAATGGCCCAATCAACCCAGGGCCCAGCC...CTCTATTTTTACCTCAGGCATAGAGCTCGCCTCATTCTGCCTTATATTTCTGCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS-3UTR GCA 90 bp | GTGGGACAGGAGAGGGGATGCTTCAAGCACAGGAAGCAAGTGTTCAGAGTAAGGACTTCCTTGAATCTCTaGCAGAGGGGAGCATCCTCC | + |
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Preference number: 4 (lower is better) Translates to: VGQERGCFKHRKQVFRVRTSLNL*QRGASS Trigger: GGAGGATGCTCCCCTCTGGCAGAGATTCAAGGAAGT...CCTTACTCTGAACACTTGCTTCCTGTGCTTGAAGCATCCCCTCTCCTGTCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS-3UTR GCA 90 bp | CAGAAGCCAGCTCGGGTCTTAGGGCCACACACTCTTTCCAAGTCTGTACAAAGCTGCTGTTTGCTGCTGTaGACACACCATCCGGATTGG | + |
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Preference number: 4 (lower is better) Translates to: QKPARVLGPHTLSKSVQSCCLLL*THHPDW Trigger: CCAATCCGGATGGTGTGTGCACAGCAGCAAACAGCA...GCTTTGTACAGACTTGGAAAGAGTGTGTGGCCCTAAGACCCGAGCTGGCTTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS-3UTR CCA 90 bp | AGTAAGGAGAGCTGTCTGCCTCGAGCGGAGGGTGCTGAAAGGTTAACAGGAGCCTGGACACAGCAATGCTaGTTAGTGAAGGTTCACCCA | + |
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Preference number: 4 (lower is better) Translates to: SKESCLPRAEGAERLTGAWTQQC*LVKVHP Trigger: TGGGTGAACCTTCACTAACCAGCATTGCTGTGTCCA...GGCTCCTGTTAACCTTTCAGCACCCTCCGCTCGAGGCAGACAGCTCTCCTTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS-3UTR TCA 90 bp | GGAATCATCAGATTAGGTTGCTATGGACACAAATACAGACAGTTCTCTACTGGCGACCTCCACACCAGCTaGAGTGGTCGCTTGGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: GIIRLGCYGHKYRQFSTGDLHTS*SGRLGG Trigger: CCCACCCAAGCGACCACTTCAGCTGGTGTGGAGGTC...GCCAGTAGAGAACTGTCTGTATTTGTGTCCATAGCAACCTAATCTGATGATTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS-3UTR GCA 90 bp | CAGGTGGGACAGGAGAGGGGATGCTTCAAGCACAGGAAGCAAGTGTTCAGAGTAAGGTGGACACAGCAATaGTGGTTAGTGAAGGTTCAC | + |
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Preference number: 4 (lower is better) Translates to: QVGQERGCFKHRKQVFRVRWTQQ*WLVKVH Trigger: GTGAACCTTCACTAACCAGCATTGCTGTGTCCACCT...TACTCTGAACACTTGCTTCCTGTGCTTGAAGCATCCCCTCTCCTGTCCCACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS-3UTR CCA 90 bp | GAGATAAGCCAAACATCACCTCAGGTGATTGACAGCAGAGTGGCCTTTCAACCAGCTGAAGTGGTCGCTTaGGTGGGGAGCAAAGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: EISQTSPQVIDSRVAFQPAEVVA*VGSKEE Trigger: TTCCTCTTTGCTCCCCACCCAAGCGACCACTTCAGC...TGGTTGAAAGGCCACTCTGCTGTCAATCACCTGAGGTGATGTTTGGCTTATCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS-3UTR GCA 90 bp | ATCAGATTAGGTTGCTATGGACACAAATACAGACAGTTCTCTACTGGCAGCAGCGACCTCTGGCTTGCCTaGGGGGACCCATTCACCATT | + |
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Preference number: 4 (lower is better) Translates to: IRLGCYGHKYRQFSTGSSDLWLA*GDPFTI Trigger: AATGGTGAATGGGTCCCCGCAGGCAAGCCAGAGGTC...GCTGCTGCCAGTAGAGAACTGTCTGTATTTGTGTCCATAGCAACCTAATCTGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS-3UTR CCA 90 bp | GAGATAAGCCAAACATCACCTCAGGTGATTGACAGCAGAGTGGCCTTTCAACCAGTACAGACAGGATGCTaGCATGGGGTGTGGAGGATA | + |
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Preference number: 4 (lower is better) Translates to: EISQTSPQVIDSRVAFQPVQTGC*HGVWRI Trigger: TATCCTCCACACCCCATGCCAGCATCCTGTCTGTAC...TGGTTGAAAGGCCACTCTGCTGTCAATCACCTGAGGTGATGTTTGGCTTATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS-3UTR TCA 90 bp | GAGCAACGCCAAATGGTAGAGGCTGTCTTTAGAATATGGGGTCATCGAACTTCAAAGAGGAAGGTGAAGTaGCAGCAGGGTTCCCAAGGA | + |
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Preference number: 4 (lower is better) Translates to: EQRQMVEAVFRIWGHRTSKRKVK*QQGSQG Trigger: TCCTTGGGAACCCTGCTGTCACTTCACCTTCCTCTT...TGAAGTTCGATGACCCCATATTCTAAAGACAGCCTCTACCATTTGGCGTTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS-3UTR TCA 90 bp | ATCAGATTAGGTTGCTATGGACACAAATACAGACAGTTCTCTACTGGCAGCAGCCCTCTGGAACATCCTTaGGGTGGTTTCTCTCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: IRLGCYGHKYRQFSTGSSPLEHP*GGFSPW Trigger: CCAAGGAGAGAAACCACCTCAAGGATGTTCCAGAGG...GCTGCTGCCAGTAGAGAACTGTCTGTATTTGTGTCCATAGCAACCTAATCTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS-3UTR CCA 90 bp | ATCAGATTAGGTTGCTATGGACACAAATACAGACAGTTCTCTACTGGCAGCAGCGACAGGATGCTGGCATaGGGTGTGGAGGATAAGGAA | + |
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Preference number: 4 (lower is better) Translates to: IRLGCYGHKYRQFSTGSSDRMLA*GVEDKE Trigger: TTCCTTATCCTCCACACCCCATGCCAGCATCCTGTC...GCTGCTGCCAGTAGAGAACTGTCTGTATTTGTGTCCATAGCAACCTAATCTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS-3UTR CCA 90 bp | TGGAATCATCAGATTAGGTTGCTATGGACACAAATACAGACAGTTCTCTACTGGTTGTTCCTGAGGTGCTaGCGTGCACCTCTGAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: WNHQIRLLWTQIQTVLYWLFLRC*RAPLSL Trigger: CAGGCTCAGAGGTGCACGCCAGCACCTCAGGAACAA...CCAGTAGAGAACTGTCTGTATTTGTGTCCATAGCAACCTAATCTGATGATTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS-3UTR CCA 90 bp | GGAATCATCAGATTAGGTTGCTATGGACACAAATACAGACAGTTCTCTACTGGCCCACGGCTGTCCAGGTaGACACAGCAATGCTGGTTA | + |
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Preference number: 4 (lower is better) Translates to: GIIRLGCYGHKYRQFSTGPRLSR*TQQCWL Trigger: TAACCAGCATTGCTGTGTCCACCTGGACAGCCGTGG...GCCAGTAGAGAACTGTCTGTATTTGTGTCCATAGCAACCTAATCTGATGATTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS-3UTR TCA 90 bp | GGAATCATCAGATTAGGTTGCTATGGACACAAATACAGACAGTTCTCTACTGGCTCTGCCCACCTCCATTaGGCTTGTTGGTCAGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: GIIRLGCYGHKYRQFSTGSAHLH*ACWSAS Trigger: TGAAGCTGACCAACAAGCTCAATGGAGGTGGGCAGA...GCCAGTAGAGAACTGTCTGTATTTGTGTCCATAGCAACCTAATCTGATGATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS-3UTR GCA 90 bp | CGCAGAAATATAAGGCAGAATGAGGCGAGCTCTATGCCTGAGGTAAAAATAGAGCTGGTAATTGCTGTTTaGTGCTGTGCACACACCATC | + |
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Preference number: 4 (lower is better) Translates to: RRNIRQNEASSMPEVKIELVIAV*CCAHTI Trigger: GATGGTGTGTGCACAGCAGCAAACAGCAATTACCAG...CTCTATTTTTACCTCAGGCATAGAGCTCGCCTCATTCTGCCTTATATTTCTGCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS-3UTR CCA 90 bp | TGGAATCATCAGATTAGGTTGCTATGGACACAAATACAGACAGTTCTCTACTGGACACACCATCCGGATTaGAAAGGATCCAGCCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: WNHQIRLLWTQIQTVLYWTHHPD*KGSSLP Trigger: TGGGAGGCTGGATCCTTTCCAATCCGGATGGTGTGT...CCAGTAGAGAACTGTCTGTATTTGTGTCCATAGCAACCTAATCTGATGATTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| 3UTR CAA 72 bp | CCAGCACACTTCTGTGAGCAACACGTTAGTACTAGCTaGCTGTTGTTAACTTTATGGCCTCTCATCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PAHFCEQHVSTS*LLLTLWPLIFS Trigger: AGAGAAGATGAGAGGCCATAAAGTTAACAACAGCAAGCTAGTACTAACGTGTTGCTCACAGAAGTGTGCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| 3UTR CAA 72 bp | CACTTCTGTGAGCAACACGTTAGTACTAGCTTGCTGTaGTTAACTTTATGGCCTCTCATCTTCTCTAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HFCEQHVSTSLL*LTLWPLIFSRS Trigger: AGACCTAGAGAAGATGAGAGGCCATAAAGTTAACAACAGCAAGCTAGTACTAACGTGTTGCTCACAGAAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS-3UTR TCA 90 bp | CGCAGAAATATAAGGCAGAATGAGGCGAGCTCTATGCCTGAGGTAAAAATAGAGTTGCAGATTGTTGCTTaGGCTTTCTATCAAATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RRNIRQNEASSMPEVKIELQIVA*AFYQIH Trigger: GTGAATTTGATAGAAAGCTCAAGCAACAATCTGCAA...CTCTATTTTTACCTCAGGCATAGAGCTCGCCTCATTCTGCCTTATATTTCTGCG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS-3UTR TCA 90 bp | TGGAATCATCAGATTAGGTTGCTATGGACACAAATACAGACAGTTCTCTACTGGTTCTATCAAATTCACTaGGGGAGAATGGTTTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: WNHQIRLLWTQIQTVLYWFYQIH*GRMVSM Trigger: CATAGAAACCATTCTCCCTCAGTGAATTTGATAGAA...CCAGTAGAGAACTGTCTGTATTTGTGTCCATAGCAACCTAATCTGATGATTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS CCA 90 bp | GGAGGGGGTGTGAGGCCACGGCTGTCCAGGTGGACACAGCAATGCTaGTTAGTGAAGGTTCACCCAAGACCTCCACACCAGCTGAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GGGVRPRLSRWTQQC*LVKVHPRPPHQLKW Trigger: CCACTTCAGCTGGTGTGGAGGTCTTGGGTGAACCTTCACTAACCAGCATTGCTGTGTCCACCTGGACAGCCGTGGCCTCACACCCCCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027859.12 ENSMUST00000161144.2 |
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| CDS-3UTR CAA 90 bp | GGTCTCAACGCAGAAGCCAGCTCGGGTCTTAGGGCCACACACTCTTTCCAAGTCGGGCCCCCACCTCCATaGCTAATGGTCCACAGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: GLNAEASSGLRATHSFQVGPPPP*LMVHRH Trigger: GTGCCTGTGGACCATTAGCAATGGAGGTGGGGGCCC...GACTTGGAAAGAGTGTGTGGCCCTAAGACCCGAGCTGGCTTCTGCGTTGAGACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS-3UTR CAA 90 bp | CCTGGCCAAGCAGGTACAATTCACACAGGTGGGACAGGAGAGGGGATGCTTCAACTAGAGACCTCTGGCTaGCCTGCGGGGACCCATTCA | + |
|
Preference number: 5 (lower is better) Translates to: PGQAGTIHTGGTGEGMLQLETSG*PAGTHS Trigger: TGAATGGGTCCCCGCAGGCAAGCCAGAGGTCTCTAG...TTGAAGCATCCCCTCTCCTGTCCCACCTGTGTGAATTGTACCTGCTTGGCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS-3UTR CAA 90 bp | CAGGAAGCAAGTGTTCAGAGTAAGGAGAGCTGTCTGCCTCGAGCGGAGGGTGCTGGGTTGATTGGGCCATaGCTGTGGGGTACAGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: QEASVQSKESCLPRAEGAGLIGP*LWGTDR Trigger: CCTGTCTGTACCCCACAGCAATGGCCCAATCAACCC...AGCACCCTCCGCTCGAGGCAGACAGCTCTCCTTACTCTGAACACTTGCTTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS CCA 90 bp | GGGTTGATTGGGCCATTGCTGTGGGGTACAGACAGGATGCTGGCATaGGGTGTGGAGGATAAGGAAGTCCAGCTGTCAGGTCCCGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GLIGPLLWGTDRMLA*GVEDKEVQLSGPEK Trigger: TTTCTCGGGACCTGACAGCTGGACTTCCTTATCCTCCACACCCCATGCCAGCATCCTGTCTGTACCCCACAGCAATGGCCCAATCAACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027859.12 ENSMUST00000161144.2 |
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| CDS CCA 90 bp | AGTGAAGGTTCACCCAAGACCTCCACACCAGCTGAAGTGGTCGCTTaGGTGGGGAGCAAAGAGGAAGGTGAAGTGACAGCAGGGTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SEGSPKTSTPAEVVA*VGSKEEGEVTAGFP Trigger: TGGGAACCCTGCTGTCACTTCACCTTCCTCTTTGCTCCCCACCCAAGCGACCACTTCAGCTGGTGTGGAGGTCTTGGGTGAACCTTCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027859.12 ENSMUST00000161144.2 |
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| CDS-3UTR CAA 90 bp | GCCTCATTTCCTGACTTCCCAGCACACTTCTGTGAGCAACACGTTAGTACTAGCGGGCTGGGCCCTGGGTaGATTGGGCCATTGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ASFPDFPAHFCEQHVSTSGLGPG*IGPLLW Trigger: CCACAGCAATGGCCCAATCAACCCAGGGCCCAGCCC...GCTAGTACTAACGTGTTGCTCACAGAAGTGTGCTGGGAAGTCAGGAAATGAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS GCA 90 bp | GGGAGCAGGCAGAGGCAAAGGCGTAGCATACTGGTAATTGCTGTTTaGTGCTGTGCACACACCATCCGGATTGGAAAGGATCCAGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GSRQRQRRSILVIAV*CCAHTIRIGKDPAS Trigger: GGAGGCTGGATCCTTTCCAATCCGGATGGTGTGTGCACAGCAGCAAACAGCAATTACCAGTATGCTACGCCTTTGCCTCTGCCTGCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS-3UTR CAA 90 bp | GGTCTCAACGCAGAAGCCAGCTCGGGTCTTAGGGCCACACACTCTTTCCAAGTCAGGTGGTTTCTCTCCTaGGCATCCAAGAAGGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GLNAEASSGLRATHSFQVRWFLS*ASKKAL Trigger: CAAGGCCTTCTTGGATGCCAAGGAGAGAAACCACCT...GACTTGGAAAGAGTGTGTGGCCCTAAGACCCGAGCTGGCTTCTGCGTTGAGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
||
| CDS GCA 90 bp | AGCAGGCAGAGGCAAAGGCGTAGCATACTGGTAATTGCTGTTTGCTaGTGTGCACACACCATCCGGATTGGAAAGGATCCAGCCTCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: SRQRQRRSILVIAVC*CAHTIRIGKDPASQ Trigger: TTGGGAGGCTGGATCCTTTCCAATCCGGATGGTGTGTGCACAGCAGCAAACAGCAATTACCAGTATGCTACGCCTTTGCCTCTGCCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS CCA 90 bp | CATACTGGTAATTGCTGTTTGCTGCTGTGCACACACCATCCGGATTaGAAAGGATCCAGCCTCCCAAGTGAGAGTAGGTCACATGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: HTGNCCLLLCTHHPD*KGSSLPSESRSHAG Trigger: GCCAGCATGTGACCTACTCTCACTTGGGAGGCTGGATCCTTTCCAATCCGGATGGTGTGTGCACAGCAGCAAACAGCAATTACCAGTATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS-3UTR CAA 90 bp | CCTAAGCGTGGCCAAGATAAATCAACTCAGAGAAAGCAGGAGAGCCACAGGAAACACACACCATCCGGATaGGAAAGGATCCAGCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PKRGQDKSTQRKQESHRKHTPSG*ERIQPP Trigger: GGGAGGCTGGATCCTTTCCAATCCGGATGGTGTGTG...TTTCCTGTGGCTCTCCTGCTTTCTCTGAGTTGATTTATCTTGGCCACGCTTAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS-3UTR CAA 90 bp | GGCACAGTACCAGGGGCTATGGGCACGATGAGGAGGGCTAGCTCTCACCCTCATGAGAAAACTTGCAGATaGTTGCTTGAGCTTTCTATC | + |
|
Preference number: 5 (lower is better) Translates to: GTVPGAMGTMRRASSHPHEKTCR*LLELSI Trigger: GATAGAAAGCTCAAGCAACAATCTGCAAGTTTTCTC...ATGAGGGTGAGAGCTAGCCCTCCTCATCGTGCCCATAGCCCCTGGTACTGTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS-3UTR CAA 90 bp | GCCTCATTTCCTGACTTCCCAGCACACTTCTGTGAGCAACACGTTAGTACTAGCGGTTCCCAAGGAGAATaGTTCCTGAGGTGCTGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: ASFPDFPAHFCEQHVSTSGSQGE*FLRCWR Trigger: ACGCCAGCACCTCAGGAACAATTCTCCTTGGGAACC...GCTAGTACTAACGTGTTGCTCACAGAAGTGTGCTGGGAAGTCAGGAAATGAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
||
| CDS-3UTR CAA 90 bp | GGTCTCAACGCAGAAGCCAGCTCGGGTCTTAGGGCCACACACTCTTTCCAAGTCGCGAAAGGGTTGTACTaGATTTTGAGAGCTGTTATC | + |
|
Preference number: 5 (lower is better) Translates to: GLNAEASSGLRATHSFQVAKGLY*ILRAVI Trigger: GATAACAGCTCTCAAAATCAAGTACAACCCTTTCGC...GACTTGGAAAGAGTGTGTGGCCCTAAGACCCGAGCTGGCTTCTGCGTTGAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS-3UTR CAA 90 bp | GGCACAGTACCAGGGGCTATGGGCACGATGAGGAGGGCTAGCTCTCACCCTCATCTTGCAGATTGTTGCTaGAGCTTTCTATCAAATTCA | + |
|
Preference number: 5 (lower is better) Translates to: GTVPGAMGTMRRASSHPHLADCC*SFLSNS Trigger: TGAATTTGATAGAAAGCTCAAGCAACAATCTGCAAG...ATGAGGGTGAGAGCTAGCCCTCCTCATCGTGCCCATAGCCCCTGGTACTGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS-3UTR CAA 90 bp | CCTAAGCGTGGCCAAGATAAATCAACTCAGAGAAAGCAGGAGAGCCACAGGAAAAGAGAGTACATAGCATaGGGGTCCAGCCCTGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: PKRGQDKSTQRKQESHRKREYIA*GSSPVT Trigger: TGTCACAGGGCTGGACCCCAATGCTATGTACTCTCT...TTTCCTGTGGCTCTCCTGCTTTCTCTGAGTTGATTTATCTTGGCCACGCTTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS-3UTR CAA 90 bp | CCTAAGCGTGGCCAAGATAAATCAACTCAGAGAAAGCAGGAGAGCCACAGGAAAGCCTCTGGAACATCCTaGAGGTGGTTTCTCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PKRGQDKSTQRKQESHRKASGTS*RWFLSL Trigger: CAAGGAGAGAAACCACCTCAAGGATGTTCCAGAGGC...TTTCCTGTGGCTCTCCTGCTTTCTCTGAGTTGATTTATCTTGGCCACGCTTAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS-3UTR CAA 90 bp | GTACAATTCACACAGGTGGGACAGGAGAGGGGATGCTTCAAGCACAGGAAGCAAATCCGTCTGCCGTTCTaGGTCACGATCATTTCATTA | + |
|
Preference number: 5 (lower is better) Translates to: VQFTQVGQERGCFKHRKQIRLPF*VTIISL Trigger: TAATGAAATGATCGTGACCAAGAACGGCAGACGGAT...TTGCTTCCTGTGCTTGAAGCATCCCCTCTCCTGTCCCACCTGTGTGAATTGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS-3UTR CAA 90 bp | GAGATAAGCCAAACATCACCTCAGGTGATTGACAGCAGAGTGGCCTTTCAACCACCACCTCCATTGAGCTaGTTGGTCAGCTTCACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: EISQTSPQVIDSRVAFQPPPPLS*LVSFTL Trigger: CAAAGTGAAGCTGACCAACAAGCTCAATGGAGGTGG...TGGTTGAAAGGCCACTCTGCTGTCAATCACCTGAGGTGATGTTTGGCTTATCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS-3UTR CAA 90 bp | GCCTCATTTCCTGACTTCCCAGCACACTTCTGTGAGCAACACGTTAGTACTAGCGCCTTGGCGAAAGGGTaGTACTTGATTTTGAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ASFPDFPAHFCEQHVSTSALAKG*YLILRA Trigger: AGCTCTCAAAATCAAGTACAACCCTTTCGCCAAGGC...GCTAGTACTAACGTGTTGCTCACAGAAGTGTGCTGGGAAGTCAGGAAATGAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS TCA 90 bp | GGAAGTCCAGCTGTCAGGTCCCGAGAAAACTTGCAGATTGTTGCTTaGGCTTTCTATCAAATTCAAGTGAGAGTAGGTCACATGCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GSPAVRSRENLQIVA*AFYQIQVRVGHMLA Trigger: AGCCAGCATGTGACCTACTCTCACTTGAATTTGATAGAAAGCTCAAGCAACAATCTGCAAGTTTTCTCGGGACCTGACAGCTGGACTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161144.2 |
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| CDS GCA 90 bp | GGTGTGGAGGATAAGGAAGTCCAGCTGTCAGGTCCCGAGAAAACTTaGAGATTGTTGCTTGAGCTTTCTATCAAATTCACTGAGGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GVEDKEVQLSGPEKT*RLLLELSIKFTEGE Trigger: TTCTCCCTCAGTGAATTTGATAGAAAGCTCAAGCAACAATCTGCAAGTTTTCTCGGGACCTGACAGCTGGACTTCCTTATCCTCCACACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS-3UTR CAA 90 bp | GAGCAACGCCAAATGGTAGAGGCTGTCTTTAGAATATGGGGTCATCGAACTTCAACTGGTAATTGCTGTTaGCTGCTGTGCACACACCAT | + |
|
Preference number: 5 (lower is better) Translates to: EQRQMVEAVFRIWGHRTSTGNCC*LLCTHH Trigger: ATGGTGTGTGCACAGCAGCAAACAGCAATTACCAGT...TGAAGTTCGATGACCCCATATTCTAAAGACAGCCTCTACCATTTGGCGTTGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS-3UTR CAA 90 bp | GAGCAACGCCAAATGGTAGAGGCTGTCTTTAGAATATGGGGTCATCGAACTTCAGGGTTGTACTTGATTTaGAGAGCTGTTATCTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: EQRQMVEAVFRIWGHRTSGLYLI*RAVISS Trigger: TGAGGAGATAACAGCTCTCAAAATCAAGTACAACCC...TGAAGTTCGATGACCCCATATTCTAAAGACAGCCTCTACCATTTGGCGTTGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS GCA 90 bp | ATAAGGAAGTCCAGCTGTCAGGTCCCGAGAAAACTTGCAGATTGTTaGTTGAGCTTTCTATCAAATTCAAGTGAGAGTAGGTCACATGCT | + |
|
Preference number: 5 (lower is better) Translates to: IRKSSCQVPRKLADC*LSFLSNSSESRSHA Trigger: AGCATGTGACCTACTCTCACTTGAATTTGATAGAAAGCTCAAGCAACAATCTGCAAGTTTTCTCGGGACCTGACAGCTGGACTTCCTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161144.2 |
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| CDS GCA 90 bp | ATAAGGAAGTCCAGCTGTCAGGTCCCGAGAAAACTTGCAGATTGTTaGTTGAGCTTTCTATCAAATTCACTGAGGGAGAATGGTTTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: IRKSSCQVPRKLADC*LSFLSNSLRENGFY Trigger: ATAGAAACCATTCTCCCTCAGTGAATTTGATAGAAAGCTCAAGCAACAATCTGCAAGTTTTCTCGGGACCTGACAGCTGGACTTCCTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS GCA 72 bp | GGGTTCCCAAGGAGAATTGTTCCTGAGGTGCTGGCGTaGACCTCTGAGCCTGATGCCACGGGGCCCCCACCT | + |
|
Preference number: 6 (lower is better) Translates to: GFPRRIVPEVLA*TSEPDATGPPP Trigger: AGGTGGGGGCCCCGTGGCATCAGGCTCAGAGGTGCACGCCAGCACCTCAGGAACAATTCTCCTTGGGAACCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027859.12 ENSMUST00000161144.2 |
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| CDS GCA 72 bp | GGTGTGAGGCCACGGCTGTCCAGGTGGACACAGCAATaGTGGTTAGTGAAGGTTCACCCAAGACCTCCACAC | + |
|
Preference number: 6 (lower is better) Translates to: GVRPRLSRWTQQ*WLVKVHPRPPH Trigger: GTGTGGAGGTCTTGGGTGAACCTTCACTAACCAGCATTGCTGTGTCCACCTGGACAGCCGTGGCCTCACACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027859.12 ENSMUST00000161144.2 |
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| CDS CCA 72 bp | GGGCCATTGCTGTGGGGTACAGACAGGATGCTGGCATaGGGTGTGGAGGATAAGGAAGTCCAGCTGTCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: GPLLWGTDRMLA*GVEDKEVQLSG Trigger: ACCTGACAGCTGGACTTCCTTATCCTCCACACCCCATGCCAGCATCCTGTCTGTACCCCACAGCAATGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027859.12 ENSMUST00000161144.2 |
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| CDS CCA 72 bp | GGGGTGAATGTAGACACAGCTGTGGCTAGAGACCTCTaGCTTGCCTGCGGGGACCCATTCACCATTGACGTA | + |
|
Preference number: 6 (lower is better) Translates to: GVNVDTAVARDL*LACGDPFTIDV Trigger: TACGTCAATGGTGAATGGGTCCCCGCAGGCAAGCCAGAGGTCTCTAGCCACAGCTGTGTCTACATTCACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027859.12 ENSMUST00000161144.2 |
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| CDS CCA 72 bp | TCACCCAAGACCTCCACACCAGCTGAAGTGGTCGCTTaGGTGGGGAGCAAAGAGGAAGGTGAAGTGACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SPKTSTPAEVVA*VGSKEEGEVTA Trigger: TGCTGTCACTTCACCTTCCTCTTTGCTCCCCACCCAAGCGACCACTTCAGCTGGTGTGGAGGTCTTGGGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027859.12 ENSMUST00000161144.2 |
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| CDS CCA 72 bp | GTGAAGGTTCACCCAAGACCTCCACACCAGCTGAAGTaGTCGCTTGGGTGGGGAGCAAAGAGGAAGGTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: VKVHPRPPHQLK*SLGWGAKRKVK Trigger: CTTCACCTTCCTCTTTGCTCCCCACCCAAGCGACCACTTCAGCTGGTGTGGAGGTCTTGGGTGAACCTTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027859.12 ENSMUST00000161144.2 |
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| CDS TCA 72 bp | TGGTCGCTTGGGTGGGGAGCAAAGAGGAAGGTGAAGTaGCAGCAGGGTTCCCAAGGAGAATTGTTCCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: WSLGWGAKRKVK*QQGSQGELFLR Trigger: CCTCAGGAACAATTCTCCTTGGGAACCCTGCTGTCACTTCACCTTCCTCTTTGCTCCCCACCCAAGCGACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027859.12 ENSMUST00000161144.2 |
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| CDS CCA 72 bp | AGAGTAGGTCACATGCTGGCTCTCAGAGATGGCCTCTaGAACATCCTTGAGGTGGTTTCTCTCCTTGGCATC | + |
|
Preference number: 6 (lower is better) Translates to: RVGHMLALRDGL*NILEVVSLLGI Trigger: GATGCCAAGGAGAGAAACCACCTCAAGGATGTTCCAGAGGCCATCTCTGAGAGCCAGCATGTGACCTACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027859.12 ENSMUST00000161144.2 |
||
| CDS CCA 72 bp | AATTGCTGTTTGCTGCTGTGCACACACCATCCGGATTaGAAAGGATCCAGCCTCCCAAGTGAGAGTAGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: NCCLLLCTHHPD*KGSSLPSESRS Trigger: TGACCTACTCTCACTTGGGAGGCTGGATCCTTTCCAATCCGGATGGTGTGTGCACAGCAGCAAACAGCAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS GCA 72 bp | AGGCAAAGGCGTAGCATACTGGTAATTGCTGTTTGCTaGTGTGCACACACCATCCGGATTGGAAAGGATCCA | + |
|
Preference number: 6 (lower is better) Translates to: RQRRSILVIAVC*CAHTIRIGKDP Trigger: TGGATCCTTTCCAATCCGGATGGTGTGTGCACAGCAGCAAACAGCAATTACCAGTATGCTACGCCTTTGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
||
| CDS GCA 72 bp | CAGAGGCAAAGGCGTAGCATACTGGTAATTGCTGTTTaGTGCTGTGCACACACCATCCGGATTGGAAAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: QRQRRSILVIAV*CCAHTIRIGKD Trigger: ATCCTTTCCAATCCGGATGGTGTGTGCACAGCAGCAAACAGCAATTACCAGTATGCTACGCCTTTGCCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
||
| CDS CAA 90 bp | AGGAAGTCCAGCTGTCAGGTCCCGAGAAAACTTGCAGATTGTTGCTaGAGCTTTCTATCAAATTCAAGTGAGAGTAGGTCACATGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: RKSSCQVPRKLADCC*SFLSNSSESRSHAG Trigger: GCCAGCATGTGACCTACTCTCACTTGAATTTGATAGAAAGCTCAAGCAACAATCTGCAAGTTTTCTCGGGACCTGACAGCTGGACTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161144.2 |
||
| CDS CAA 72 bp | GTCCAGCTGTCAGGTCCCGAGAAAACTTGCAGATTGTaGCTTGAGCTTTCTATCAAATTCACTGAGGGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: VQLSGPEKTCRL*LELSIKFTEGE Trigger: TTCTCCCTCAGTGAATTTGATAGAAAGCTCAAGCAACAATCTGCAAGTTTTCTCGGGACCTGACAGCTGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
||
| CDS CAA 90 bp | AGGAAGTCCAGCTGTCAGGTCCCGAGAAAACTTGCAGATTGTTGCTaGAGCTTTCTATCAAATTCACTGAGGGAGAATGGTTTCTATGCA | + |
|
Preference number: 6 (lower is better) Translates to: RKSSCQVPRKLADCC*SFLSNSLRENGFYA Trigger: TGCATAGAAACCATTCTCCCTCAGTGAATTTGATAGAAAGCTCAAGCAACAATCTGCAAGTTTTCTCGGGACCTGACAGCTGGACTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
||
| CDS CAA 90 bp | GAGGATAAGGAAGTCCAGCTGTCAGGTCCCGAGAAAACTTGCAGATaGTTGCTTGAGCTTTCTATCAAATTCACTGAGGGAGAATGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: EDKEVQLSGPEKTCR*LLELSIKFTEGEWF Trigger: AAACCATTCTCCCTCAGTGAATTTGATAGAAAGCTCAAGCAACAATCTGCAAGTTTTCTCGGGACCTGACAGCTGGACTTCCTTATCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
||
| CDS TCA 72 bp | GCTGTCAGGTCCCGAGAAAACTTGCAGATTGTTGCTTaGGCTTTCTATCAAATTCAAGTGAGAGTAGGTCAC | + |
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Preference number: 6 (lower is better) Translates to: AVRSRENLQIVA*AFYQIQVRVGH Trigger: GTGACCTACTCTCACTTGAATTTGATAGAAAGCTCAAGCAACAATCTGCAAGTTTTCTCGGGACCTGACAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161144.2 |
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| CDS GCA 72 bp | TCCAGCTGTCAGGTCCCGAGAAAACTTGCAGATTGTTaGTTGAGCTTTCTATCAAATTCACTGAGGGAGAAT | + |
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Preference number: 6 (lower is better) Translates to: SSCQVPRKLADC*LSFLSNSLREN Trigger: ATTCTCCCTCAGTGAATTTGATAGAAAGCTCAAGCAACAATCTGCAAGTTTTCTCGGGACCTGACAGCTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS CAA 72 bp | AGCTGTCAGGTCCCGAGAAAACTTGCAGATTGTTGCTaGAGCTTTCTATCAAATTCACTGAGGGAGAATGGT | + |
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Preference number: 6 (lower is better) Translates to: SCQVPRKLADCC*SFLSNSLRENG Trigger: ACCATTCTCCCTCAGTGAATTTGATAGAAAGCTCAAGCAACAATCTGCAAGTTTTCTCGGGACCTGACAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS CAA 90 bp | GATAAGGAAGTCCAGCTGTCAGGTCCCGAGAAAACTTGCAGATTGTaGCTTGAGCTTTCTATCAAATTCACTGAGGGAGAATGGTTTCTA | + |
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Preference number: 6 (lower is better) Translates to: DKEVQLSGPEKTCRL*LELSIKFTEGEWFL Trigger: TAGAAACCATTCTCCCTCAGTGAATTTGATAGAAAGCTCAAGCAACAATCTGCAAGTTTTCTCGGGACCTGACAGCTGGACTTCCTTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS GCA 72 bp | GATAAGGAAGTCCAGCTGTCAGGTCCCGAGAAAACTTaGAGATTGTTGCTTGAGCTTTCTATCAAATTCACT | + |
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Preference number: 6 (lower is better) Translates to: DKEVQLSGPEKT*RLLLELSIKFT Trigger: AGTGAATTTGATAGAAAGCTCAAGCAACAATCTGCAAGTTTTCTCGGGACCTGACAGCTGGACTTCCTTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027859.12 |
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| CDS GCA 72 bp | GATAAGGAAGTCCAGCTGTCAGGTCCCGAGAAAACTTaGAGATTGTTGCTTGAGCTTTCTATCAAATTCAAG | + |
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Preference number: 6 (lower is better) Translates to: DKEVQLSGPEKT*RLLLELSIKFK Trigger: CTTGAATTTGATAGAAAGCTCAAGCAACAATCTGCAAGTTTTCTCGGGACCTGACAGCTGGACTTCCTTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161144.2 |
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| CDS CAA 72 bp | AGCTGTCAGGTCCCGAGAAAACTTGCAGATTGTTGCTaGAGCTTTCTATCAAATTCAAGTGAGAGTAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: SCQVPRKLADCC*SFLSNSSESRS Trigger: TGACCTACTCTCACTTGAATTTGATAGAAAGCTCAAGCAACAATCTGCAAGTTTTCTCGGGACCTGACAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161144.2 |
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