Pregenerated sensors for TBX1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000009097Ensembl transcript IDs: ENSMUST00000009241.7, ENSMUST00000232143.2, ENSMUST00000232335.2, ENSMUST00000232589.2
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GACGCGCCCGGCGCCTCCAGGCGCAGATCGGCGTGCGGGGGACTGTaGCGGCCTCCGGATCCGCCGGGTAGCGGGACGAGGCCGCCAGGC | + |
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Preference number: 1 (lower is better) Translates to: DAPGASRRRSACGGL*RPPDPPGSGTRPPG Trigger: GCCTGGCGGCCTCGTCCCGCTACCCGGCGGATCCGGAGGCCGCCACAGTCCCCCGCACGCCGATCTGCGCCTGGAGGCGCCGGGCGCGTC 80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232143.2 |
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| 3UTR GCA 90 bp | CCGCCAGGCCCGGGCAGTGCGGGGCTCAGCACGCGCGCCAGCAGCTaGGGCGGGTGCGTAGCGTCGCCGAGCGCTGCGGGTCCGGAGTCA | + |
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Preference number: 1 (lower is better) Translates to: PPGPGSAGLSTRASS*GGCVASPSAAGPES Trigger: TGACTCCGGACCCGCAGCGCTCGGCGACGCTACGCACCCGCCGCAGCTGCTGGCGCGCGTGCTGAGCCCCGCACTGCCCGGGCCTGGCGG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232143.2 |
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| 3UTR GCA 90 bp | CCGGGCAGTGCGGGGCTCAGCACGCGCGCCAGCAGCTGCGGCGGGTaGGTAGCGTCGCCGAGCGCTGCGGGTCCGGAGTCACGGTCGAAC | + |
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Preference number: 1 (lower is better) Translates to: PGSAGLSTRASSCGG*VASPSAAGPESRSN Trigger: GTTCGACCGTGACTCCGGACCCGCAGCGCTCGGCGACGCTACGCACCCGCCGCAGCTGCTGGCGCGCGTGCTGAGCCCCGCACTGCCCGG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232143.2 |
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| 3UTR GCA 90 bp | CACGCGCGCCAGCAGCTGCGGCGGGTGCGTAGCGTCGCCGAGCGCTaGGGGTCCGGAGTCACGGTCGAACTCGCGCCGGGCTTCTGCAGC | + |
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Preference number: 1 (lower is better) Translates to: HARQQLRRVRSVAER*GSGVTVELAPGFCS Trigger: GCTGCAGAAGCCCGGCGCGAGTTCGACCGTGACTCCGGACCCGCAGCGCTCGGCGACGCTACGCACCCGCCGCAGCTGCTGGCGCGCGTG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232143.2 |
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| 3UTR CCA 90 bp | CGTGGCCGCGCAGGCCTGGCAGCGGGTAGGGCGCCGGCCGGCTCTTaGCCCCGAGGTAGTGGTCGTAGGCGGCGGCCGGGTACTTGTAGG | + |
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Preference number: 1 (lower is better) Translates to: RGRAGLAAGRAPAGS*PRGSGRRRRPGTCR Trigger: CCTACAAGTACCCGGCCGCCGCCTACGACCACTACCTCGGGGCCAAGAGCCGGCCGGCGCCCTACCCGCTGCCAGGCCTGCGCGGCCACG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232143.2 |
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| 3UTR CCA 90 bp | CGCGTCCTTGGATGGCCCTCGGGGTCGGCGCGCGGGCGCACTATCTaGGGCAGTAGTCGTAGGCACCGGGCGGCGCGGCCGCCGACGAGT | + |
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Preference number: 1 (lower is better) Translates to: RVLGWPSGSARGRTI*GSSRRHRAARPPTS Trigger: ACTCGTCGGCGGCCGCGCCGCCCGGTGCCTACGACTACTGCCCCAGATAGTGCGCCCGCGCGCCGACCCCGAGGGCCATCCAAGGACGCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232143.2 |
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| 3UTR CCA 90 bp | GGAGCTTTGGCACTGGCGGGCGGGAAACCCGCATGGCTCCCCAGATaGGGAGCGCGTCCTTGGATGGCCCTCGGGGTCGGCGCGCGGGCG | + |
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Preference number: 1 (lower is better) Translates to: GALALAGGKPAWLPR*GARPWMALGVGARA Trigger: CGCCCGCGCGCCGACCCCGAGGGCCATCCAAGGACGCGCTCCCCATCTGGGGAGCCATGCGGGTTTCCCGCCCGCCAGTGCCAAAGCTCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000009241.7 ENSMUST00000232143.2 ENSMUST00000232335.2 |
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| 3UTR GCA 90 bp | CGTATCTACACCGCCCGCAGGCGGGGCTCTCTCGGTCGTCTACACTaGAATTGCCGGCCGGGCCGGAGGCGACGAGGTCTCGCGGAGAAC | + |
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Preference number: 1 (lower is better) Translates to: RIYTARRRGSLGRLH*NCRPGRRRRGLAEN Trigger: GTTCTCCGCGAGACCTCGTCGCCTCCGGCCCGGCCGGCAATTGCAGTGTAGACGACCGAGAGAGCCCCGCCTGCGGGCGGTGTAGATACG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
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| 3UTR TCA 90 bp | GGAGTCACGGTCGAACTCGCGCCGGGCTTCTGCAGCGTCTTTGTCTaGGCCATTGGGCTGCGTGGGGGAAGCCACGGGATTCCGAGAGCG | + |
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Preference number: 1 (lower is better) Translates to: GVTVELAPGFCSVFV*AIGLRGGSHGIPRA Trigger: CGCTCTCGGAATCCCGTGGCTTCCCCCACGCAGCCCAATGGCTCAGACAAAGACGCTGCAGAAGCCCGGCGCGAGTTCGACCGTGACTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232143.2 |
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| 3UTR GCA 90 bp | TACACCGCCCGCAGGCGGGGCTCTCTCGGTCGTCTACACTGCAATTaGCGGCCGGGCCGGAGGCGACGAGGTCTCGCGGAGAACAATAAA | + |
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Preference number: 1 (lower is better) Translates to: YTARRRGSLGRLHCN*RPGRRRRGLAENNK Trigger: TTTATTGTTCTCCGCGAGACCTCGTCGCCTCCGGCCCGGCCGGCAATTGCAGTGTAGACGACCGAGAGAGCCCCGCCTGCGGGCGGTGTA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
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| 3UTR TCA 90 bp | CGTGCAGGCCCAAGTCCTGCACCCGCAGCTGCAGGTGTGGTGAGCTaGAGTGAAAGCCGCTGCCTGCCCCGGAAAACCGAATGCTCAGCC | + |
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Preference number: 1 (lower is better) Translates to: RAGPSPAPAAAGVVS*SESRCLPRKTECSA Trigger: GGCTGAGCATTCGGTTTTCCGGGGCAGGCAGCGGCTTTCACTTCAGCTCACCACACCTGCAGCTGCGGGTGCAGGACTTGGGCCTGCACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232335.2 |
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| 3UTR CCA 90 bp | CGCGCCGGGCTTCTGCAGCGTCTTTGTCTGAGCCATTGGGCTGCGTaGGGGAAGCCACGGGATTCCGAGAGCGAGCAAAGGCACTCACGA | + |
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Preference number: 1 (lower is better) Translates to: RAGLLQRLCLSHWAA*GKPRDSESEQRHSR Trigger: TCGTGAGTGCCTTTGCTCGCTCTCGGAATCCCGTGGCTTCCCCCACGCAGCCCAATGGCTCAGACAAAGACGCTGCAGAAGCCCGGCGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232143.2 |
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| 3UTR CCA 90 bp | GGTCGAACTCGCGCCGGGCTTCTGCAGCGTCTTTGTCTGAGCCATTaGGCTGCGTGGGGGAAGCCACGGGATTCCGAGAGCGAGCAAAGG | + |
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Preference number: 1 (lower is better) Translates to: GRTRAGLLQRLCLSH*AAWGKPRDSESEQR Trigger: CCTTTGCTCGCTCTCGGAATCCCGTGGCTTCCCCCACGCAGCCCAATGGCTCAGACAAAGACGCTGCAGAAGCCCGGCGCGAGTTCGACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232143.2 |
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| 3UTR TCA 90 bp | GTCAGCGTGCAGGCCCAAGTCCTGCACCCGCAGCTGCAGGTGTGGTaGGCTGAAGTGAAAGCCGCTGCCTGCCCCGGAAAACCGAATGCT | + |
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Preference number: 1 (lower is better) Translates to: VSVQAQVLHPQLQVW*AEVKAAACPGKPNA Trigger: AGCATTCGGTTTTCCGGGGCAGGCAGCGGCTTTCACTTCAGCTCACCACACCTGCAGCTGCGGGTGCAGGACTTGGGCCTGCACGCTGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232335.2 |
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| 3UTR GCA 90 bp | AACTCGCGCCGGGCTTCTGCAGCGTCTTTGTCTGAGCCATTGGGCTaGGTGGGGGAAGCCACGGGATTCCGAGAGCGAGCAAAGGCACTC | + |
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Preference number: 1 (lower is better) Translates to: NSRRASAASLSEPLG*VGEATGFRERAKAL Trigger: GAGTGCCTTTGCTCGCTCTCGGAATCCCGTGGCTTCCCCCACGCAGCCCAATGGCTCAGACAAAGACGCTGCAGAAGCCCGGCGCGAGTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232143.2 |
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| 3UTR TCA 90 bp | GGGGCGATTAGAGCTGGGGAGACCCTCACTCCACACCCACACCAGTaGCCAGGGCTGGGAAGACTAAGTCTCTGTGTCCCAAAGCCGCCC | + |
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Preference number: 1 (lower is better) Translates to: GAIRAGETLTPHPHQ*PGLGRLSLCVPKPP Trigger: GGGCGGCTTTGGGACACAGAGACTTAGTCTTCCCAGCCCTGGTCACTGGTGTGGGTGTGGAGTGAGGGTCTCCCCAGCTCTAATCGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232335.2 |
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| 3UTR CCA 90 bp | AACAATAAATACCACTTCCTTCCGCCTGGACGGGAGCTTTGGCACTaGCGGGCGGGAAACCCGCATGGCTCCCCAGATGGGGAGCGCGTC | + |
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Preference number: 1 (lower is better) Translates to: NNKYHFLPPGRELWH*RAGNPHGSPDGERV Trigger: GACGCGCTCCCCATCTGGGGAGCCATGCGGGTTTCCCGCCCGCCAGTGCCAAAGCTCCCGTCCAGGCGGAAGGAAGTGGTATTTATTGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000009241.7 ENSMUST00000232143.2 ENSMUST00000232335.2 |
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| 3UTR CCA 90 bp | GCGGAGAACAATAAATACCACTTCCTTCCGCCTGGACGGGAGCTTTaGCACTGGCGGGCGGGAAACCCGCATGGCTCCCCAGATGGGGAG | + |
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Preference number: 1 (lower is better) Translates to: AENNKYHFLPPGREL*HWRAGNPHGSPDGE Trigger: CTCCCCATCTGGGGAGCCATGCGGGTTTCCCGCCCGCCAGTGCCAAAGCTCCCGTCCAGGCGGAAGGAAGTGGTATTTATTGTTCTCCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000009241.7 ENSMUST00000232143.2 ENSMUST00000232335.2 |
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| 3UTR GCA 90 bp | TTTCACGGAAAAACTTATAGGCCTAGTCCGGTAAACAGGTCAGCGTaGAGGCCCAAGTCCTGCACCCGCAGCTGCAGGTGTGGTGAGCTG | + |
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Preference number: 1 (lower is better) Translates to: FHGKTYRPSPVNRSA*RPKSCTRSCRCGEL Trigger: CAGCTCACCACACCTGCAGCTGCGGGTGCAGGACTTGGGCCTGCACGCTGACCTGTTTACCGGACTAGGCCTATAAGTTTTTCCGTGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232335.2 |
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| 3UTR GCA 90 bp | GGCAATCTTAAGCTGCGTGATCCGGTGATTCTGGTAGGCAGTGACTaGAGTGAAGCGTGTCTCCTCAAACACAAAAGTTTTGAAGTTCTC | + |
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Preference number: 1 (lower is better) Translates to: GNLKLRDPVILVGSD*SEACLLKHKSFEVL Trigger: GAGAACTTCAAAACTTTTGTGTTTGAGGAGACACGCTTCACTGCAGTCACTGCCTACCAGAATCACCGGATCACGCAGCTTAAGATTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232143.2 |
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| 3UTR-3UTR CCA 90 bp | GGCGGCGCGGCCGCCGACGAGTACACGTTGGCTGCTGCGGCAGCAGCGGCGGCGAGCCATTGGGCTGCGTaGGGGAAGCCACGGGATTCC | + |
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Preference number: 2 (lower is better) Translates to: GGAAADEYTLAAAAAAAASHWAA*GKPRDS Trigger: GGAATCCCGTGGCTTCCCCCACGCAGCCCAATGGCT...CGCCGCCGCTGCTGCCGCAGCAGCCAACGTGTACTCGTCGGCGGCCGCGCCGCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232143.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGTGCCAGGCCAGGGCAACGCTGGAAGAGCCGAGCCCGCGGCTTGTTTCTGTGTGGACCCAGGGAGCTaGGGGAGGGAGGCAGCGACC | + |
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Preference number: 2 (lower is better) Translates to: LVPGQGNAGRAEPAACFCVDPGS*GREAAT Trigger: GGTCGCTGCCTCCCTCCCTCAGCTCCCTGGGTCCAC...ACAGAAACAAGCCGCGGGCTCGGCTCTTCCAGCGTTGCCCTGGCCTGGCACCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232335.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCTCGGTCGTCTACACTGCAATTGCCGGCCGGGCCGGAGGCGACGAGGTCTCCGGGAGCTTTGGCACTaGCGGGCGGGAAACCCGCAT | + |
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Preference number: 2 (lower is better) Translates to: SLGRLHCNCRPGRRRRGLRELWH*RAGNPH Trigger: ATGCGGGTTTCCCGCCCGCCAGTGCCAAAGCTCCCG...GAGACCTCGTCGCCTCCGGCCCGGCCGGCAATTGCAGTGTAGACGACCGAGAGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009241.7 ENSMUST00000232143.2 ENSMUST00000232335.2 |
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| 3UTR CAA 90 bp | GGTCCGGAGTCACGGTCGAACTCGCGCCGGGCTTCTGCAGCGTCTTaGTCTGAGCCATTGGGCTGCGTGGGGGAAGCCACGGGATTCCGA | + |
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Preference number: 2 (lower is better) Translates to: GPESRSNSRRASAAS*SEPLGCVGEATGFR Trigger: TCGGAATCCCGTGGCTTCCCCCACGCAGCCCAATGGCTCAGACAAAGACGCTGCAGAAGCCCGGCGCGAGTTCGACCGTGACTCCGGACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232143.2 |
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| 3UTR CAA 90 bp | GCTGGTGCCAGGCCAGGGCAACGCTGGAAGAGCCGAGCCCGCGGCTaGTTTCTGTCTTTCCGCATGCCATCCGAGGCCGGATGGACAGTG | + |
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Preference number: 2 (lower is better) Translates to: AGARPGQRWKSRARG*FLSFRMPSEAGWTV Trigger: CACTGTCCATCCGGCCTCGGATGGCATGCGGAAAGACAGAAACAAGCCGCGGGCTCGGCTCTTCCAGCGTTGCCCTGGCCTGGCACCAGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232335.2 |
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| 3UTR-3UTR CCA 90 bp | CGCGCGGGCGCACTATCTGGGGCAGTAGTCGTAGGCACCGGGCGGCGCGGCCGCGCATGTAGTCGGCCATaGGATCCATTCCAAAAAGCT | + |
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Preference number: 2 (lower is better) Translates to: RAGALSGAVVVGTGRRGRACSRP*DPFQKA Trigger: AGCTTTTTGGAATGGATCCCATGGCCGACTACATGC...GCGGCCGCGCCGCCCGGTGCCTACGACTACTGCCCCAGATAGTGCGCCCGCGCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000232143.2 |
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| 3UTR CAA 90 bp | CGGTCGAACTCGCGCCGGGCTTCTGCAGCGTCTTTGTCTGAGCCATaGGGCTGCGTGGGGGAAGCCACGGGATTCCGAGAGCGAGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: RSNSRRASAASLSEP*GCVGEATGFRERAK Trigger: CTTTGCTCGCTCTCGGAATCCCGTGGCTTCCCCCACGCAGCCCAATGGCTCAGACAAAGACGCTGCAGAAGCCCGGCGCGAGTTCGACCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232143.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGTGCCAGGCCAGGGCAACGCTGGAAGAGCCGAGCCCGCGGCTTGTTTCTGTCCACTTCCTTCCGCCTaGACGGGAGCTTTGGCACTG | + |
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Preference number: 2 (lower is better) Translates to: LVPGQGNAGRAEPAACFCPLPSA*TGALAL Trigger: CAGTGCCAAAGCTCCCGTCCAGGCGGAAGGAAGTGG...ACAGAAACAAGCCGCGGGCTCGGCTCTTCCAGCGTTGCCCTGGCCTGGCACCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232335.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCGGGCCGGAGGCGACGAGGTCTCGCGGAGAACAATAAATACCACTTCCTTCCCTGGACGGGAGCTTTaGCACTGGCGGGCGGGAAAC | + |
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Preference number: 2 (lower is better) Translates to: GRAGGDEVSRRTINTTSFPGREL*HWRAGN Trigger: GTTTCCCGCCCGCCAGTGCCAAAGCTCCCGTCCAGG...GAAGGAAGTGGTATTTATTGTTCTCCGCGAGACCTCGTCGCCTCCGGCCCGGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009241.7 ENSMUST00000232143.2 ENSMUST00000232335.2 |
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| 3UTR-3UTR GCA 90 bp | TTTCATCCACTGTGCGCCCTTAGCCGGCGAGTCCGGGTGGTAGTGTACTCGGCCAGGTGTAGCAGGATCTaGCTTGCCGGCCACCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: FHPLCALSRRVRVVVYSARCSRI*LAGHQP Trigger: TGGCTGGTGGCCGGCAAGGCAGATCCTGCTACACCT...GGCCGAGTACACTACCACCCGGACTCGCCGGCTAAGGGCGCACAGTGGATGAAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232143.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGGCGACGAGGTCTCGCGGAGAACAATAAATACCACTTCCTTCCGCCTGGACCTCGGTCGTCTACACTaGAATTGCCGGCCGGGCCGG | + |
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Preference number: 2 (lower is better) Translates to: GGDEVSRRTINTTSFRLDLGRLH*NCRPGR Trigger: CCGGCCCGGCCGGCAATTGCAGTGTAGACGACCGAG...GTCCAGGCGGAAGGAAGTGGTATTTATTGTTCTCCGCGAGACCTCGTCGCCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009241.7 ENSMUST00000232143.2 ENSMUST00000232335.2 |
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| 3UTR-3UTR CCA 90 bp | GAGAGCGAGCAAAGGCACTCACGAGCGGCAGCGCTCCGGGCCGGTGGTTCCGGGGAGTTGAGAATAATATaGCCATTGTCATCCAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: ESEQRHSRAAALRAGGSGELRII*PLSSSR Trigger: CCTGCTGGATGACAATGGCCATATTATTCTCAACTC...CCCGGAACCACCGGCCCGGAGCGCTGCCGCTCGTGAGTGCCTTTGCTCGCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232143.2 |
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| 3UTR-3UTR GCA 90 bp | AATAAATACCACTTCCTTCCGCCTGGACGGGAGCTTTGGCACTGGCGGGCGGGAGTAAACAGGTCAGCGTaGAGGCCCAAGTCCTGCACC | + |
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Preference number: 2 (lower is better) Translates to: NKYHFLPPGRELWHWRAGVNRSA*RPKSCT Trigger: GGTGCAGGACTTGGGCCTGCACGCTGACCTGTTTAC...TCCCGCCCGCCAGTGCCAAAGCTCCCGTCCAGGCGGAAGGAAGTGGTATTTATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232335.2 |
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| 3UTR-3UTR CCA 90 bp | TACACTGCAATTGCCGGCCGGGCCGGAGGCGACGAGGTCTCGCGGAGAACAATACATCCAGCAGGTTATTaGTCAGTTTCAGCTTGTCGA | + |
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Preference number: 2 (lower is better) Translates to: YTAIAGRAGGDEVSRRTIHPAGY*SVSACR Trigger: TCGACAAGCTGAAACTGACCAATAACCTGCTGGATG...TATTGTTCTCCGCGAGACCTCGTCGCCTCCGGCCCGGCCGGCAATTGCAGTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232143.2 |
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| 3UTR-3UTR CCA 90 bp | TTGAGAATAATATGGCCATTGTCATCCAGCAGGTTATTGGTCAGTTTCAGCTTGCCACTTCCTTCCGCCTaGACGGGAGCTTTGGCACTG | + |
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Preference number: 2 (lower is better) Translates to: LRIIWPLSSSRLLVSFSLPLPSA*TGALAL Trigger: CAGTGCCAAAGCTCCCGTCCAGGCGGAAGGAAGTGG...CAAGCTGAAACTGACCAATAACCTGCTGGATGACAATGGCCATATTATTCTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232143.2 |
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| 3UTR GCA 72 bp | GCGGGGCTCAGCACGCGCGCCAGCAGCTGCGGCGGGTaGGTAGCGTCGCCGAGCGCTGCGGGTCCGGAGTCA | + |
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Preference number: 3 (lower is better) Translates to: AGLSTRASSCGG*VASPSAAGPES Trigger: TGACTCCGGACCCGCAGCGCTCGGCGACGCTACGCACCCGCCGCAGCTGCTGGCGCGCGTGCTGAGCCCCGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232143.2 |
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| 3UTR CCA 72 bp | GCAGGCCTGGCAGCGGGTAGGGCGCCGGCCGGCTCTTaGCCCCGAGGTAGTGGTCGTAGGCGGCGGCCGGGT | + |
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Preference number: 3 (lower is better) Translates to: AGLAAGRAPAGS*PRGSGRRRRPG Trigger: ACCCGGCCGCCGCCTACGACCACTACCTCGGGGCCAAGAGCCGGCCGGCGCCCTACCCGCTGCCAGGCCTGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232143.2 |
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| 3UTR CCA 72 bp | GGATGGCCCTCGGGGTCGGCGCGCGGGCGCACTATCTaGGGCAGTAGTCGTAGGCACCGGGCGGCGCGGCCG | + |
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Preference number: 3 (lower is better) Translates to: GWPSGSARGRTI*GSSRRHRAARP Trigger: CGGCCGCGCCGCCCGGTGCCTACGACTACTGCCCCAGATAGTGCGCCCGCGCGCCGACCCCGAGGGCCATCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232143.2 |
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| 3UTR-3UTR CAA 90 bp | CGCGCGGGCGCACTATCTGGGGCAGTAGTCGTAGGCACCGGGCGGCGCGGCCGCTCGTCTACACTGCAATaGCCGGCCGGGCCGGAGGCG | + |
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Preference number: 3 (lower is better) Translates to: RAGALSGAVVVGTGRRGRSSTLQ*PAGPEA Trigger: CGCCTCCGGCCCGGCCGGCAATTGCAGTGTAGACGA...GCGGCCGCGCCGCCCGGTGCCTACGACTACTGCCCCAGATAGTGCGCCCGCGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232143.2 |
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| 3UTR CCA 72 bp | GCAAAGGCACTCACGAGCGGCAGCGCTCCGGGCCGGTaGTTCCGGGGCCAGTCCTCCGGGTCGCAATCCCGG | + |
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Preference number: 3 (lower is better) Translates to: AKALTSGSAPGR*FRGQSSGSQSR Trigger: CCGGGATTGCGACCCGGAGGACTGGCCCCGGAACCACCGGCCCGGAGCGCTGCCGCTCGTGAGTGCCTTTGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232143.2 |
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| 3UTR GCA 72 bp | CGCAGGCGGGGCTCTCTCGGTCGTCTACACTGCAATTaGCGGCCGGGCCGGAGGCGACGAGGTCTCGCGGAG | + |
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Preference number: 3 (lower is better) Translates to: RRRGSLGRLHCN*RPGRRRRGLAE Trigger: CTCCGCGAGACCTCGTCGCCTCCGGCCCGGCCGGCAATTGCAGTGTAGACGACCGAGAGAGCCCCGCCTGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
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| 3UTR GCA 72 bp | ACCGCCCGCAGGCGGGGCTCTCTCGGTCGTCTACACTaGAATTGCCGGCCGGGCCGGAGGCGACGAGGTCTC | + |
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Preference number: 3 (lower is better) Translates to: TARRRGSLGRLH*NCRPGRRRRGL Trigger: GAGACCTCGTCGCCTCCGGCCCGGCCGGCAATTGCAGTGTAGACGACCGAGAGAGCCCCGCCTGCGGGCGGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
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| 3UTR-3UTR CAA 90 bp | CGGTCGTCTACACTGCAATTGCCGGCCGGGCCGGAGGCGACGAGGTCTCGCGGAGCCTGGACGGGAGCTTaGGCACTGGCGGGCGGGAAA | + |
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Preference number: 3 (lower is better) Translates to: RSSTLQLPAGPEATRSRGAWTGA*ALAGGK Trigger: TTTCCCGCCCGCCAGTGCCAAAGCTCCCGTCCAGGC...TCCGCGAGACCTCGTCGCCTCCGGCCCGGCCGGCAATTGCAGTGTAGACGACCG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009241.7 ENSMUST00000232143.2 ENSMUST00000232335.2 |
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| 3UTR CCA 72 bp | ACGGGAGCTTTGGCACTGGCGGGCGGGAAACCCGCATaGCTCCCCAGATGGGGAGCGCGTCCTTGGATGGCC | + |
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Preference number: 3 (lower is better) Translates to: TGALALAGGKPA*LPRWGARPWMA Trigger: GGCCATCCAAGGACGCGCTCCCCATCTGGGGAGCCATGCGGGTTTCCCGCCCGCCAGTGCCAAAGCTCCCGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000009241.7 ENSMUST00000232143.2 ENSMUST00000232335.2 |
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| 3UTR CCA 72 bp | TACCACTTCCTTCCGCCTGGACGGGAGCTTTGGCACTaGCGGGCGGGAAACCCGCATGGCTCCCCAGATGGG | + |
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Preference number: 3 (lower is better) Translates to: YHFLPPGRELWH*RAGNPHGSPDG Trigger: CCCATCTGGGGAGCCATGCGGGTTTCCCGCCCGCCAGTGCCAAAGCTCCCGTCCAGGCGGAAGGAAGTGGTA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009241.7 ENSMUST00000232143.2 ENSMUST00000232335.2 |
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| 3UTR CCA 72 bp | CGCGCCGGGCTTCTGCAGCGTCTTTGTCTGAGCCATTaGGCTGCGTGGGGGAAGCCACGGGATTCCGAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: RAGLLQRLCLSH*AAWGKPRDSES Trigger: GCTCTCGGAATCCCGTGGCTTCCCCCACGCAGCCCAATGGCTCAGACAAAGACGCTGCAGAAGCCCGGCGCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232143.2 |
||
| 3UTR TCA 72 bp | GTCGAACTCGCGCCGGGCTTCTGCAGCGTCTTTGTCTaGGCCATTGGGCTGCGTGGGGGAAGCCACGGGATT | + |
|
Preference number: 3 (lower is better) Translates to: VELAPGFCSVFV*AIGLRGGSHGI Trigger: AATCCCGTGGCTTCCCCCACGCAGCCCAATGGCTCAGACAAAGACGCTGCAGAAGCCCGGCGCGAGTTCGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232143.2 |
||
| 3UTR TCA 72 bp | CAGGCCCAAGTCCTGCACCCGCAGCTGCAGGTGTGGTaGGCTGAAGTGAAAGCCGCTGCCTGCCCCGGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: QAQVLHPQLQVW*AEVKAAACPGK Trigger: TTTTCCGGGGCAGGCAGCGGCTTTCACTTCAGCTCACCACACCTGCAGCTGCGGGTGCAGGACTTGGGCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232335.2 |
||
| 3UTR GCA 72 bp | CGGGCTTCTGCAGCGTCTTTGTCTGAGCCATTGGGCTaGGTGGGGGAAGCCACGGGATTCCGAGAGCGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: RASAASLSEPLG*VGEATGFRERA Trigger: TGCTCGCTCTCGGAATCCCGTGGCTTCCCCCACGCAGCCCAATGGCTCAGACAAAGACGCTGCAGAAGCCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232143.2 |
||
| 3UTR TCA 72 bp | TCCTGCACCCGCAGCTGCAGGTGTGGTGAGCTGAAGTaGAAGCCGCTGCCTGCCCCGGAAAACCGAATGCTC | + |
|
Preference number: 3 (lower is better) Translates to: SCTRSCRCGELK*KPLPAPENRML Trigger: GAGCATTCGGTTTTCCGGGGCAGGCAGCGGCTTTCACTTCAGCTCACCACACCTGCAGCTGCGGGTGCAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232335.2 |
||
| 3UTR CCA 72 bp | AATAAATACCACTTCCTTCCGCCTGGACGGGAGCTTTaGCACTGGCGGGCGGGAAACCCGCATGGCTCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: NKYHFLPPGREL*HWRAGNPHGSP Trigger: TGGGGAGCCATGCGGGTTTCCCGCCCGCCAGTGCCAAAGCTCCCGTCCAGGCGGAAGGAAGTGGTATTTATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009241.7 ENSMUST00000232143.2 ENSMUST00000232335.2 |
||
| 3UTR CCA 72 bp | CTTCTGCAGCGTCTTTGTCTGAGCCATTGGGCTGCGTaGGGGAAGCCACGGGATTCCGAGAGCGAGCAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LLQRLCLSHWAA*GKPRDSESEQR Trigger: CCTTTGCTCGCTCTCGGAATCCCGTGGCTTCCCCCACGCAGCCCAATGGCTCAGACAAAGACGCTGCAGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232143.2 |
||
| 3UTR CCA 72 bp | ACGAAATTCTGGGCTGGTGCCAGGCCAGGGCAACGCTaGAAGAGCCGAGCCCGCGGCTTGTTTCTGTCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: TKFWAGARPGQR*KSRARGLFLSF Trigger: GAAAGACAGAAACAAGCCGCGGGCTCGGCTCTTCCAGCGTTGCCCTGGCCTGGCACCAGCCCAGAATTTCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232335.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTAGGGATGGTGGTGCAGCGGCTCGGACGCGCCCGGCGCCTCCAGGCGCAGATTTGGTCAGTTTCAGCTaGTCGAAAGACACAATCTGT | + |
|
Preference number: 3 (lower is better) Translates to: CRDGGAAARTRPAPPGADLVSFS*SKDTIC Trigger: ACAGATTGTGTCTTTCGACAAGCTGAAACTGACCAA...ATCTGCGCCTGGAGGCGCCGGGCGCGTCCGAGCCGCTGCACCACCATCCCTACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232143.2 |
||
| 3UTR GCA 72 bp | AGCCTTAACTCTGGCTGGCCTTCAGTTGGCCCTTCCTaGTGGGGCTCAGGAAGGGAGGGATCAAAGGGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: SLNSGWPSVGPS*WGSGREGSKGS Trigger: GGAACCCTTTGATCCCTCCCTTCCTGAGCCCCAGCAGGAAGGGCCAACTGAAGGCCAGCCAGAGTTAAGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232335.2 |
||
| 3UTR CCA 72 bp | CTTAACTCTGGCTGGCCTTCAGTTGGCCCTTCCTGCTaGGGCTCAGGAAGGGAGGGATCAAAGGGTTCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LNSGWPSVGPSC*GSGREGSKGSF Trigger: AAAGGAACCCTTTGATCCCTCCCTTCCTGAGCCCCAGCAGGAAGGGCCAACTGAAGGCCAGCCAGAGTTAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232335.2 |
||
| 3UTR-3UTR CAA 90 bp | CCGAACATCATTCCTGGCTTTCACGGAAAAACTTATAGGCCTAGTCCGGTAAACTCGTCTACACTGCAATaGCCGGCCGGGCCGGAGGCG | + |
|
Preference number: 3 (lower is better) Translates to: PNIIPGFHGKTYRPSPVNSSTLQ*PAGPEA Trigger: CGCCTCCGGCCCGGCCGGCAATTGCAGTGTAGACGA...GTTTACCGGACTAGGCCTATAAGTTTTTCCGTGAAAGCCAGGAATGATGTTCGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232335.2 |
||
| 3UTR TCA 72 bp | GCCTGGGAAAAATTGCTTCACACGGGAGTTTCAAGATaGCTCATGACCACTGTCATTGTGCGCCCCCACCCC | + |
|
Preference number: 3 (lower is better) Translates to: AWEKLLHTGVSR*LMTTVIVRPHP Trigger: GGGGTGGGGGCGCACAATGACAGTGGTCATGAGTCATCTTGAAACTCCCGTGTGAAGCAATTTTTCCCAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000232335.2 |
||
| 3UTR CCA 72 bp | ATAAAGTCAATAAACAGGGGAAACGAAATTCTGGGCTaGTGCCAGGCCAGGGCAACGCTGGAAGAGCCGAGC | + |
|
Preference number: 3 (lower is better) Translates to: IKSINRGNEILG*CQARATLEEPS Trigger: GCTCGGCTCTTCCAGCGTTGCCCTGGCCTGGCACCAGCCCAGAATTTCGTTTCCCCTGTTTATTGACTTTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232335.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAGGCGACGAGGTCTCGCGGAGAACAATAAATACCACTTCCTTCCGCCTGGACTATCTGTGCATGGAGTaGAGAATAATATGGCCATTG | + |
|
Preference number: 3 (lower is better) Translates to: GGDEVSRRTINTTSFRLDYLCME*RIIWPL Trigger: CAATGGCCATATTATTCTCAACTCCATGCACAGATA...GTCCAGGCGGAAGGAAGTGGTATTTATTGTTCTCCGCGAGACCTCGTCGCCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232143.2 |
||
| 3UTR GCA 72 bp | CTGTGTCCCAAAGCCGCCCGGCCCATTCGAATTAGATaGAAAAGAATAGCCACACCGGCAATTTCCAAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: LCPKAARPIRIR*KRIATPAISKR Trigger: TCTTTTGGAAATTGCCGGTGTGGCTATTCTTTTGCATCTAATTCGAATGGGCCGGGCGGCTTTGGGACACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232335.2 |
||
| 3UTR GCA 72 bp | AAGCTGCGTGATCCGGTGATTCTGGTAGGCAGTGACTaGAGTGAAGCGTGTCTCCTCAAACACAAAAGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: KLRDPVILVGSD*SEACLLKHKSF Trigger: AAAACTTTTGTGTTTGAGGAGACACGCTTCACTGCAGTCACTGCCTACCAGAATCACCGGATCACGCAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232143.2 |
||
| 3UTR TCA 72 bp | CACACCGGCAATTTCCAAAAGAGGCAAAACCGTTTATaGAATCGGCGCCGGTGCAGTATCTACAGTATCTAC | + |
|
Preference number: 3 (lower is better) Translates to: HTGNFQKRQNRL*NRRRCSIYSIY Trigger: GTAGATACTGTAGATACTGCACCGGCGCCGATTTCATAAACGGTTTTGCCTCTTTTGGAAATTGCCGGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232335.2 |
||
| CDS-3UTR GCA 90 bp | CCGCCTGGACGGGAGCTTTGGCACTGGCGGGCGGGAAACCCGCATGGCTCCCCAACGCGCGCCAGCAGCTaGGGCGGGTGCGTAGCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: PPGRELWHWRAGNPHGSPTRASS*GGCVAS Trigger: CGACGCTACGCACCCGCCGCAGCTGCTGGCGCGCGT...TGGGGAGCCATGCGGGTTTCCCGCCCGCCAGTGCCAAAGCTCCCGTCCAGGCGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
||
| CDS-3UTR CCA 90 bp | TCCGCCTGGACGGGAGCTTTGGCACTGGCGGGCGGGAAACCCGCATGGCTCCCCAGCGCTCCGGGCCGGTaGTTCCGGGGCCAGTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SAWTGALALAGGKPAWLPSAPGR*FRGQSS Trigger: GGAGGACTGGCCCCGGAACCACCGGCCCGGAGCGCT...GGGGAGCCATGCGGGTTTCCCGCCCGCCAGTGCCAAAGCTCCCGTCCAGGCGGA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
||
| CDS-3UTR CCA 90 bp | GGCGGGGCTCTCTCGGTCGTCTACACTGCAATTGCCGGCCGGGCCGGAGGCGACAGCGCTCCGGGCCGGTaGTTCCGGGGCCAGTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GGALSVVYTAIAGRAGGDSAPGR*FRGQSS Trigger: GGAGGACTGGCCCCGGAACCACCGGCCCGGAGCGCT...GTCGCCTCCGGCCCGGCCGGCAATTGCAGTGTAGACGACCGAGAGAGCCCCGCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
||
| CDS-3UTR TCA 90 bp | GGGGCTCTCTCGGTCGTCTACACTGCAATTGCCGGCCGGGCCGGAGGCGACGAGACCGCGGGGTGGTGGTaGTGGTGCGGGTGCGCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GALSVVYTAIAGRAGGDETAGWW*WCGCAC Trigger: GCACGCGCACCCGCACCATCACCACCACCCCGCGGT...CTCGTCGCCTCCGGCCCGGCCGGCAATTGCAGTGTAGACGACCGAGAGAGCCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
||
| CDS-3UTR CCA 90 bp | TCCGCCTGGACGGGAGCTTTGGCACTGGCGGGCGGGAAACCCGCATGGCTCCCCGCGCCGGCCGGCTCTTaGCCCCGAGGTAGTGGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SAWTGALALAGGKPAWLPAPAGS*PRGSGR Trigger: ACGACCACTACCTCGGGGCCAAGAGCCGGCCGGCGC...GGGGAGCCATGCGGGTTTCCCGCCCGCCAGTGCCAAAGCTCCCGTCCAGGCGGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
||
| 3UTR CAA 72 bp | CCGCAGGCGGGGCTCTCTCGGTCGTCTACACTGCAATaGCCGGCCGGGCCGGAGGCGACGAGGTCTCGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: PQAGLSRSSTLQ*PAGPEATRSRG Trigger: TCCGCGAGACCTCGTCGCCTCCGGCCCGGCCGGCAATTGCAGTGTAGACGACCGAGAGAGCCCCGCCTGCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
||
| CDS-3UTR GCA 90 bp | TCCGCCTGGACGGGAGCTTTGGCACTGGCGGGCGGGAAACCCGCATGGCTCCCCGCCTTCATCTCCAGCTaGACGCTCACGCTGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: SAWTGALALAGGKPAWLPAFISS*TLTLAT Trigger: GGTGGCCAGCGTGAGCGTGCAGCTGGAGATGAAGGC...GGGGAGCCATGCGGGTTTCCCGCCCGCCAGTGCCAAAGCTCCCGTCCAGGCGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009241.7 ENSMUST00000232143.2 ENSMUST00000232335.2 |
||
| CDS-3UTR GCA 90 bp | TCCGCCTGGACGGGAGCTTTGGCACTGGCGGGCGGGAAACCCGCATGGCTCCCCCCAGGCCGCTCAGACTaGTGGCTGCGAAGGCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SAWTGALALAGGKPAWLPPGRSD*WLRRLQ Trigger: TTGCAGCCTTCGCAGCCAGCAGTCTGAGCGGCCTGG...GGGGAGCCATGCGGGTTTCCCGCCCGCCAGTGCCAAAGCTCCCGTCCAGGCGGA 69% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000232143.2 ENSMUST00000232335.2 |
||
| CDS-3UTR CCA 90 bp | GCCTGGACGGGAGCTTTGGCACTGGCGGGCGGGAAACCCGCATGGCTCCCCAGACCGACGAGTACACGTTaGCTGCTGCGGCAGCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: AWTGALALAGGKPAWLPRPTSTR*LLRQQR Trigger: CCGCTGCTGCCGCAGCAGCCAACGTGTACTCGTCGG...TCTGGGGAGCCATGCGGGTTTCCCGCCCGCCAGTGCCAAAGCTCCCGTCCAGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
||
| CDS-3UTR GCA 90 bp | CTTCCGCCTGGACGGGAGCTTTGGCACTGGCGGGCGGGAAACCCGCATGGCTCCGCCTTCATCTCCAGCTaGACGCTCACGCTGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: LPPGRELWHWRAGNPHGSAFISS*TLTLAT Trigger: GGTGGCCAGCGTGAGCGTGCAGCTGGAGATGAAGGC...GGAGCCATGCGGGTTTCCCGCCCGCCAGTGCCAAAGCTCCCGTCCAGGCGGAAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009241.7 ENSMUST00000232143.2 ENSMUST00000232335.2 |
||
| CDS-3UTR GCA 90 bp | GGCAGTAGTCGTAGGCACCGGGCGGCGCGGCCGCCGACGAGTACACGTTGGCTGGCTGGCTGCGAAGGCTaGAACGTCGCAGAAGTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: GSSRRHRAARPPTSTRWLAGCEG*NVAEVR Trigger: TCGCACTTCTGCGACGTTGCAGCCTTCGCAGCCAGC...CAGCCAACGTGTACTCGTCGGCGGCCGCGCCGCCCGGTGCCTACGACTACTGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232143.2 |
||
| CDS-3UTR CCA 90 bp | GGCGGGAAACCCGCATGGCTCCCCAGATGGGGAGCGCGTCCTTGGATGGCCCTCAGCCATTGGGCTGCGTaGGGGAAGCCACGGGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: GGKPAWLPRWGARPWMALSHWAA*GKPRDS Trigger: GGAATCCCGTGGCTTCCCCCACGCAGCCCAATGGCT...GAGGGCCATCCAAGGACGCGCTCCCCATCTGGGGAGCCATGCGGGTTTCCCGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
||
| CDS-3UTR CCA 90 bp | TCCTTCCGCCTGGACGGGAGCTTTGGCACTGGCGGGCGGGAAACCCGCATGGCTCCGACGAGTACACGTTaGCTGCTGCGGCAGCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SFRLDGSFGTGGRETRMAPTSTR*LLRQQR Trigger: CCGCTGCTGCCGCAGCAGCCAACGTGTACTCGTCGG...AGCCATGCGGGTTTCCCGCCCGCCAGTGCCAAAGCTCCCGTCCAGGCGGAAGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
||
| CDS-3UTR GCA 90 bp | CGGGCCGGAGGCGACGAGGTCTCGCGGAGAACAATAAATACCACTTCCTTCCGCACGCGCGCCAGCAGCTaGGGCGGGTGCGTAGCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: RAGGDEVSRRTINTTSFRTRASS*GGCVAS Trigger: CGACGCTACGCACCCGCCGCAGCTGCTGGCGCGCGT...GCGGAAGGAAGTGGTATTTATTGTTCTCCGCGAGACCTCGTCGCCTCCGGCCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
||
| CDS-3UTR GCA 90 bp | CCTTCCGCCTGGACGGGAGCTTTGGCACTGGCGGGCGGGAAACCCGCATGGCTCGCTCAGACTGCTGGCTaGGAAGGCTGCAACGTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: PSAWTGALALAGGKPAWLAQTAG*EGCNVA Trigger: TGCGACGTTGCAGCCTTCGCAGCCAGCAGTCTGAGC...GAGCCATGCGGGTTTCCCGCCCGCCAGTGCCAAAGCTCCCGTCCAGGCGGAAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000232143.2 ENSMUST00000232335.2 |
||
| CDS-3UTR GCA 90 bp | GGGCTCTCTCGGTCGTCTACACTGCAATTGCCGGCCGGGCCGGAGGCGACGAGGGCTCAGACTGCTGGCTaGGAAGGCTGCAACGTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLSRSSTLQLPAGPEATRAQTAG*EGCNVA Trigger: TGCGACGTTGCAGCCTTCGCAGCCAGCAGTCTGAGC...CCTCGTCGCCTCCGGCCCGGCCGGCAATTGCAGTGTAGACGACCGAGAGAGCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000232143.2 ENSMUST00000232335.2 |
||
| CDS-3UTR CCA 90 bp | CGGTCGTCTACACTGCAATTGCCGGCCGGGCCGGAGGCGACGAGGTCTCGCGGAGCTGCACGCTCACGCTaGCCACCTTCGGGTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RSSTLQLPAGPEATRSRGAARSR*PPSGSS Trigger: AGAAGAACCCGAAGGTGGCCAGCGTGAGCGTGCAGC...TCCGCGAGACCTCGTCGCCTCCGGCCCGGCCGGCAATTGCAGTGTAGACGACCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009241.7 ENSMUST00000232143.2 ENSMUST00000232335.2 |
||
| CDS-3UTR GCA 90 bp | CTTCCGCCTGGACGGGAGCTTTGGCACTGGCGGGCGGGAAACCCGCATGGCTCCCTGTTTCATCCACTGTaGGCCCTTAGCCGGCGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LPPGRELWHWRAGNPHGSLFHPL*ALSRRV Trigger: GACTCGCCGGCTAAGGGCGCACAGTGGATGAAACAG...GGAGCCATGCGGGTTTCCCGCCCGCCAGTGCCAAAGCTCCCGTCCAGGCGGAAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
||
| CDS-3UTR GCA 90 bp | CCGCCTGGACGGGAGCTTTGGCACTGGCGGGCGGGAAACCCGCATGGCTCCCCACTGGTAGGCAGTGACTaGAGTGAAGCGTGTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PPGRELWHWRAGNPHGSPLVGSD*SEACLL Trigger: GAGGAGACACGCTTCACTGCAGTCACTGCCTACCAG...TGGGGAGCCATGCGGGTTTCCCGCCCGCCAGTGCCAAAGCTCCCGTCCAGGCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
||
| CDS-3UTR GCA 90 bp | CCTTCCGCCTGGACGGGAGCTTTGGCACTGGCGGGCGGGAAACCCGCATGGCTCCAGAAGTGCGAGAGCTaGGTGAGCCACGGACTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PSAWTGALALAGGKPAWLQKCES*VSHGLD Trigger: GTCTAGTCCGTGGCTCACGCAGCTCTCGCACTTCTG...GAGCCATGCGGGTTTCCCGCCCGCCAGTGCCAAAGCTCCCGTCCAGGCGGAAGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000232143.2 ENSMUST00000232335.2 |
||
| 3UTR CAA 72 bp | TCGCGCCGGGCTTCTGCAGCGTCTTTGTCTGAGCCATaGGGCTGCGTGGGGGAAGCCACGGGATTCCGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SRRASAASLSEP*GCVGEATGFRE Trigger: CTCTCGGAATCCCGTGGCTTCCCCCACGCAGCCCAATGGCTCAGACAAAGACGCTGCAGAAGCCCGGCGCGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232143.2 |
||
| 3UTR CAA 72 bp | TCACGGTCGAACTCGCGCCGGGCTTCTGCAGCGTCTTaGTCTGAGCCATTGGGCTGCGTGGGGGAAGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: SRSNSRRASAAS*SEPLGCVGEAT Trigger: CGTGGCTTCCCCCACGCAGCCCAATGGCTCAGACAAAGACGCTGCAGAAGCCCGGCGCGAGTTCGACCGTGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232143.2 |
||
| CDS-3UTR GCA 90 bp | ATATCTACACGTATCTACACCGCCCGCAGGCGGGGCTCTCTCGGTCGTCTACACGTACACGTTGGCTGCTaGGGCAGCAGCGGCGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: ISTRIYTARRRGSLGRLHVHVGC*GSSGGG Trigger: GCCGCCGCCGCTGCTGCCGCAGCAGCCAACGTGTAC...GTGTAGACGACCGAGAGAGCCCCGCCTGCGGGCGGTGTAGATACGTGTAGATAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
||
| CDS-3UTR CCA 90 bp | CCGCCTGGACGGGAGCTTTGGCACTGGCGGGCGGGAAACCCGCATGGCTCCCCAGCTTCACTTGGAACGTaGGGAACATTCGTCTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PPGRELWHWRAGNPHGSPASLGT*GTFVCL Trigger: CAGGCAGACGAATGTTCCCCACGTTCCAAGTGAAGC...TGGGGAGCCATGCGGGTTTCCCGCCCGCCAGTGCCAAAGCTCCCGTCCAGGCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
||
| CDS-3UTR CCA 90 bp | TCTCGGTCGTCTACACTGCAATTGCCGGCCGGGCCGGAGGCGACGAGGTCTCGCCTTTGTCTGAGCCATTaGGCTGCGTGGGGGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SRSSTLQLPAGPEATRSRLCLSH*AAWGKP Trigger: TGGCTTCCCCCACGCAGCCCAATGGCTCAGACAAAG...GCGAGACCTCGTCGCCTCCGGCCCGGCCGGCAATTGCAGTGTAGACGACCGAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
||
| CDS-3UTR CCA 90 bp | TCTCGGTCGTCTACACTGCAATTGCCGGCCGGGCCGGAGGCGACGAGGTCTCGCAATCCCGGAAGCCTTTaGCGAAGGGGTTGCTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SRSSTLQLPAGPEATRSRNPGSL*RRGCWQ Trigger: TTGCCAGCAACCCCTTCGCCAAAGGCTTCCGGGATT...GCGAGACCTCGTCGCCTCCGGCCCGGCCGGCAATTGCAGTGTAGACGACCGAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
||
| CDS-3UTR CCA 90 bp | CTGGACGGGAGCTTTGGCACTGGCGGGCGGGAAACCCGCATGGCTCCCCAGATGAATCCCGGAAGCCTTTaGCGAAGGGGTTGCTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LDGSFGTGGRETRMAPQMNPGSL*RRGCWQ Trigger: TTGCCAGCAACCCCTTCGCCAAAGGCTTCCGGGATT...CATCTGGGGAGCCATGCGGGTTTCCCGCCCGCCAGTGCCAAAGCTCCCGTCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
||
| CDS-3UTR CCA 90 bp | CTACACGTATCTACACCGCCCGCAGGCGGGGCTCTCTCGGTCGTCTACACTGCAAGCCATTGGGCTGCGTaGGGGAAGCCACGGGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: LHVSTPPAGGALSVVYTASHWAA*GKPRDS Trigger: GGAATCCCGTGGCTTCCCCCACGCAGCCCAATGGCT...TGCAGTGTAGACGACCGAGAGAGCCCCGCCTGCGGGCGGTGTAGATACGTGTAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
||
| CDS-3UTR CCA 90 bp | CGACGAGGTCTCGCGGAGAACAATAAATACCACTTCCTTCCGCCTGGACGGGAGGCGCCGGCCGGCTCTTaGCCCCGAGGTAGTGGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: RRGLAENNKYHFLPPGREAPAGS*PRGSGR Trigger: ACGACCACTACCTCGGGGCCAAGAGCCGGCCGGCGC...CTCCCGTCCAGGCGGAAGGAAGTGGTATTTATTGTTCTCCGCGAGACCTCGTCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
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| CDS-3UTR TCA 90 bp | GGGAAGCCACGGGATTCCGAGAGCGAGCAAAGGCACTCACGAGCGGCAGCGCTCATTCGTCTGCCTTGGTaGCGATCATCTCGGTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GKPRDSESEQRHSRAAALIRLPW*RSSRCP Trigger: TGGGCACCGAGATGATCGTCACCAAGGCAGACGAAT...GAGCGCTGCCGCTCGTGAGTGCCTTTGCTCGCTCTCGGAATCCCGTGGCTTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232143.2 |
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| CDS-3UTR GCA 90 bp | CGGGCCGGAGGCGACGAGGTCTCGCGGAGAACAATAAATACCACTTCCTTCCGCGCCTTCATCTCCAGCTaGACGCTCACGCTGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: RAGGDEVSRRTINTTSFRAFISS*TLTLAT Trigger: GGTGGCCAGCGTGAGCGTGCAGCTGGAGATGAAGGC...GCGGAAGGAAGTGGTATTTATTGTTCTCCGCGAGACCTCGTCGCCTCCGGCCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009241.7 ENSMUST00000232143.2 ENSMUST00000232335.2 |
||
| CDS-3UTR GCA 90 bp | CCATTGGGCTGCGTGGGGGAAGCCACGGGATTCCGAGAGCGAGCAAAGGCACTCCAGAAGTGCGAGAGCTaGGTGAGCCACGGACTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PLGCVGEATGFRERAKALQKCES*VSHGLD Trigger: GTCTAGTCCGTGGCTCACGCAGCTCTCGCACTTCTG...GAGTGCCTTTGCTCGCTCTCGGAATCCCGTGGCTTCCCCCACGCAGCCCAATGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232143.2 |
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| CDS-3UTR GCA 90 bp | TACACTGCAATTGCCGGCCGGGCCGGAGGCGACGAGGTCTCGCGGAGAACAATAGCAACGTCGCAGAAGTaGGAGAGCTGCGTGAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: YTAIAGRAGGDEVSRRTIATSQK*ESCVSH Trigger: GTGGCTCACGCAGCTCTCGCACTTCTGCGACGTTGC...TATTGTTCTCCGCGAGACCTCGTCGCCTCCGGCCCGGCCGGCAATTGCAGTGTA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000232143.2 ENSMUST00000232335.2 |
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| CDS-3UTR CCA 90 bp | TGCCGGCCGGGCCGGAGGCGACGAGGTCTCGCGGAGAACAATAAATACCACTTCGCTGCACGCTCACGCTaGCCACCTTCGGGTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CRPGRRRRGLAENNKYHFAARSR*PPSGSS Trigger: AGAAGAACCCGAAGGTGGCCAGCGTGAGCGTGCAGC...GAAGTGGTATTTATTGTTCTCCGCGAGACCTCGTCGCCTCCGGCCCGGCCGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009241.7 ENSMUST00000232143.2 ENSMUST00000232335.2 |
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| CDS-3UTR CCA 90 bp | CGGGCCGGAGGCGACGAGGTCTCGCGGAGAACAATAAATACCACTTCCTTCCGCGCTGCACGCTCACGCTaGCCACCTTCGGGTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RAGGDEVSRRTINTTSFRAARSR*PPSGSS Trigger: AGAAGAACCCGAAGGTGGCCAGCGTGAGCGTGCAGC...GCGGAAGGAAGTGGTATTTATTGTTCTCCGCGAGACCTCGTCGCCTCCGGCCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009241.7 ENSMUST00000232143.2 ENSMUST00000232335.2 |
||
| CDS-3UTR CCA 90 bp | CCTTCCGCCTGGACGGGAGCTTTGGCACTGGCGGGCGGGAAACCCGCATGGCTCGCATGTAGTCGGCCATaGGATCCATTCCAAAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PSAWTGALALAGGKPAWLACSRP*DPFQKA Trigger: AGCTTTTTGGAATGGATCCCATGGCCGACTACATGC...GAGCCATGCGGGTTTCCCGCCCGCCAGTGCCAAAGCTCCCGTCCAGGCGGAAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
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| CDS-3UTR TCA 90 bp | AGGGAGGGATCAAAGGGTTCCTTTGGCCACTTTGATGGTGTTGAGTTAATGGGGACCGCGGGGTGGTGGTaGTGGTGCGGGTGCGCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: REGSKGSFGHFDGVELMGTAGWW*WCGCAC Trigger: GCACGCGCACCCGCACCATCACCACCACCCCGCGGT...CCCCATTAACTCAACACCATCAAAGTGGCCAAAGGAACCCTTTGATCCCTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232335.2 |
||
| CDS-3UTR GCA 90 bp | AAATACCACTTCCTTCCGCCTGGACGGGAGCTTTGGCACTGGCGGGCGGGAAACCTGTTTCATCCACTGTaGGCCCTTAGCCGGCGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KYHFLPPGRELWHWRAGNLFHPL*ALSRRV Trigger: GACTCGCCGGCTAAGGGCGCACAGTGGATGAAACAG...GTTTCCCGCCCGCCAGTGCCAAAGCTCCCGTCCAGGCGGAAGGAAGTGGTATTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
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| CDS-3UTR GCA 90 bp | ATATCTACACGTATCTACACCGCCCGCAGGCGGGGCTCTCTCGGTCGTCTACACGCTGGCTGCGAAGGCTaGAACGTCGCAGAAGTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: ISTRIYTARRRGSLGRLHAGCEG*NVAEVR Trigger: TCGCACTTCTGCGACGTTGCAGCCTTCGCAGCCAGC...GTGTAGACGACCGAGAGAGCCCCGCCTGCGGGCGGTGTAGATACGTGTAGATAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232335.2 |
||
| CDS-3UTR GCA 90 bp | GGAGGCGACGAGGTCTCGCGGAGAACAATAAATACCACTTCCTTCCGCCTGGACCCAGGCCGCTCAGACTaGTGGCTGCGAAGGCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GGDEVSRRTINTTSFRLDPGRSD*WLRRLQ Trigger: TTGCAGCCTTCGCAGCCAGCAGTCTGAGCGGCCTGG...GTCCAGGCGGAAGGAAGTGGTATTTATTGTTCTCCGCGAGACCTCGTCGCCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000232143.2 ENSMUST00000232335.2 |
||
| CDS-3UTR CCA 90 bp | GGACGGGAGCTTTGGCACTGGCGGGCGGGAAACCCGCATGGCTCCCCAGATGGGCCAAAAAGCTTCACTTaGAACGTGGGGAACATTCGT | + |
|
Preference number: 4 (lower is better) Translates to: GRELWHWRAGNPHGSPDGPKSFT*NVGNIR Trigger: ACGAATGTTCCCCACGTTCCAAGTGAAGCTTTTTGG...CCCATCTGGGGAGCCATGCGGGTTTCCCGCCCGCCAGTGCCAAAGCTCCCGTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
||
| CDS-3UTR CCA 90 bp | CGTCTACACTGCAATTGCCGGCCGGGCCGGAGGCGACGAGGTCTCGCGGAGAACGCATGTAGTCGGCCATaGGATCCATTCCAAAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RLHCNCRPGRRRRGLAENACSRP*DPFQKA Trigger: AGCTTTTTGGAATGGATCCCATGGCCGACTACATGC...GTTCTCCGCGAGACCTCGTCGCCTCCGGCCCGGCCGGCAATTGCAGTGTAGACG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
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| CDS-3UTR GCA 90 bp | CACGGGAGTTTCAAGATGACTCATGACCACTGTCATTGTGCGCCCCCACCCCCAAGGTGTAGCAGGATCTaGCTTGCCGGCCACCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HGSFKMTHDHCHCAPPPPRCSRI*LAGHQP Trigger: TGGCTGGTGGCCGGCAAGGCAGATCCTGCTACACCT...TGGGGGTGGGGGCGCACAATGACAGTGGTCATGAGTCATCTTGAAACTCCCGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000232335.2 |
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| CDS-3UTR CCA 90 bp | CTACACGTATCTACACCGCCCGCAGGCGGGGCTCTCTCGGTCGTCTACACTGCAGCTTCACTTGGAACGTaGGGAACATTCGTCTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LHVSTPPAGGALSVVYTAASLGT*GTFVCL Trigger: CAGGCAGACGAATGTTCCCCACGTTCCAAGTGAAGC...TGCAGTGTAGACGACCGAGAGAGCCCCGCCTGCGGGCGGTGTAGATACGTGTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
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| CDS-3UTR CCA 90 bp | ATATCTACACGTATCTACACCGCCCGCAGGCGGGGCTCTCTCGGTCGTCTACACCTTTGTCTGAGCCATTaGGCTGCGTGGGGGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ISTRIYTARRRGSLGRLHLCLSH*AAWGKP Trigger: TGGCTTCCCCCACGCAGCCCAATGGCTCAGACAAAG...GTGTAGACGACCGAGAGAGCCCCGCCTGCGGGCGGTGTAGATACGTGTAGATAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
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| CDS-3UTR GCA 90 bp | AGGGGAAACGAAATTCTGGGCTGGTGCCAGGCCAGGGCAACGCTGGAAGAGCCGGAACATTCGTCTGCCTaGCTTGGTGACGATCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: RGNEILGWCQARATLEEPEHSSA*LGDDHL Trigger: GAGATGATCGTCACCAAGGCAGGCAGACGAATGTTC...CGGCTCTTCCAGCGTTGCCCTGGCCTGGCACCAGCCCAGAATTTCGTTTCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232335.2 |
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| CDS-3UTR CCA 90 bp | TACCACTTCCTTCCGCCTGGACGGGAGCTTTGGCACTGGCGGGCGGGAAACCCGCATCCAGCAGGTTATTaGTCAGTTTCAGCTTGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: YHFLPPGRELWHWRAGNPHPAGY*SVSACR Trigger: TCGACAAGCTGAAACTGACCAATAACCTGCTGGATG...CGGGTTTCCCGCCCGCCAGTGCCAAAGCTCCCGTCCAGGCGGAAGGAAGTGGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
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| CDS-3UTR GCA 90 bp | GGAGGCGACGAGGTCTCGCGGAGAACAATAAATACCACTTCCTTCCGCCTGGACCTGGTAGGCAGTGACTaGAGTGAAGCGTGTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GGDEVSRRTINTTSFRLDLVGSD*SEACLL Trigger: GAGGAGACACGCTTCACTGCAGTCACTGCCTACCAG...GTCCAGGCGGAAGGAAGTGGTATTTATTGTTCTCCGCGAGACCTCGTCGCCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
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| CDS-3UTR GCA 90 bp | CCAAAAGAGGCAAAACCGTTTATGAAATCGGCGCCGGTGCAGTATCTACAGTATGTACACGTTGGCTGCTaGGGCAGCAGCGGCGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: PKEAKPFMKSAPVQYLQYVHVGC*GSSGGG Trigger: GCCGCCGCCGCTGCTGCCGCAGCAGCCAACGTGTAC...ATACTGTAGATACTGCACCGGCGCCGATTTCATAAACGGTTTTGCCTCTTTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
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| CDS-3UTR CCA 90 bp | TACCACTTCCTTCCGCCTGGACGGGAGCTTTGGCACTGGCGGGCGGGAAACCCGGAGTTGAGAATAATATaGCCATTGTCATCCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YHFLPPGRELWHWRAGNPELRII*PLSSSR Trigger: CCTGCTGGATGACAATGGCCATATTATTCTCAACTC...CGGGTTTCCCGCCCGCCAGTGCCAAAGCTCCCGTCCAGGCGGAAGGAAGTGGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
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| CDS-3UTR CCA 90 bp | TCTCTCGGTCGTCTACACTGCAATTGCCGGCCGGGCCGGAGGCGACGAGGTCTCGAGTTGAGAATAATATaGCCATTGTCATCCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLGRLHCNCRPGRRRRGLELRII*PLSSSR Trigger: CCTGCTGGATGACAATGGCCATATTATTCTCAACTC...GAGACCTCGTCGCCTCCGGCCCGGCCGGCAATTGCAGTGTAGACGACCGAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
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| CDS-3UTR CCA 90 bp | CACTGCAATTGCCGGCCGGGCCGGAGGCGACGAGGTCTCGCGGAGAACAATAAACATCCAGCAGGTTATTaGTCAGTTTCAGCTTGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: HCNCRPGRRRRGLAENNKHPAGY*SVSACR Trigger: TCGACAAGCTGAAACTGACCAATAACCTGCTGGATG...TTTATTGTTCTCCGCGAGACCTCGTCGCCTCCGGCCCGGCCGGCAATTGCAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
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| CDS-3UTR GCA 90 bp | GGAGGCGACGAGGTCTCGCGGAGAACAATAAATACCACTTCCTTCCGCCTGGACGAACATTCGTCTGCCTaGCTTGGTGACGATCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: GGDEVSRRTINTTSFRLDEHSSA*LGDDHL Trigger: GAGATGATCGTCACCAAGGCAGGCAGACGAATGTTC...GTCCAGGCGGAAGGAAGTGGTATTTATTGTTCTCCGCGAGACCTCGTCGCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
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| CDS-3UTR CCA 90 bp | AATAAATACCACTTCCTTCCGCCTGGACGGGAGCTTTGGCACTGGCGGGCGGGACCAAAAAGCTTCACTTaGAACGTGGGGAACATTCGT | + |
|
Preference number: 4 (lower is better) Translates to: NKYHFLPPGRELWHWRAGPKSFT*NVGNIR Trigger: ACGAATGTTCCCCACGTTCCAAGTGAAGCTTTTTGG...TCCCGCCCGCCAGTGCCAAAGCTCCCGTCCAGGCGGAAGGAAGTGGTATTTATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
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| CDS-3UTR GCA 90 bp | AAAACCGTTTATGAAATCGGCGCCGGTGCAGTATCTACAGTATCTACACATATCAGGTGTAGCAGGATCTaGCTTGCCGGCCACCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KTVYEIGAGAVSTVSTHIRCSRI*LAGHQP Trigger: TGGCTGGTGGCCGGCAAGGCAGATCCTGCTACACCT...GATATGTGTAGATACTGTAGATACTGCACCGGCGCCGATTTCATAAACGGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
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| CDS-3UTR GCA 90 bp | AAAACCGTTTATGAAATCGGCGCCGGTGCAGTATCTACAGTATCTACACATATCGCAACGTCGCAGAAGTaGGAGAGCTGCGTGAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KTVYEIGAGAVSTVSTHIATSQK*ESCVSH Trigger: GTGGCTCACGCAGCTCTCGCACTTCTGCGACGTTGC...GATATGTGTAGATACTGTAGATACTGCACCGGCGCCGATTTCATAAACGGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232335.2 |
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| CDS GCA 90 bp | CGAACGGGTCGGCGCCAGGCGACGGGGATCCCAGGCCGCTCAGACTaGTGGCTGCGAAGGCTGCAACGTCGCAGAAGTGCGAGAGCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: RTGRRQATGIPGRSD*WLRRLQRRRSARAA Trigger: CGCAGCTCTCGCACTTCTGCGACGTTGCAGCCTTCGCAGCCAGCAGTCTGAGCGGCCTGGGATCCCCGTCGCCTGGCGCCGACCCGTTCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000232143.2 ENSMUST00000232335.2 |
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| CDS GCA 90 bp | GTCGGCGCCAGGCGACGGGGATCCCAGGCCGCTCAGACTGCTGGCTaGGAAGGCTGCAACGTCGCAGAAGTGCGAGAGCTGCGTGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VGARRRGSQAAQTAG*EGCNVAEVRELREP Trigger: TGGCTCACGCAGCTCTCGCACTTCTGCGACGTTGCAGCCTTCGCAGCCAGCAGTCTGAGCGGCCTGGGATCCCCGTCGCCTGGCGCCGAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000232143.2 ENSMUST00000232335.2 |
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| CDS-3UTR CAA 90 bp | CCTTCCGCCTGGACGGGAGCTTTGGCACTGGCGGGCGGGAAACCCGCATGGCTCTTCTTCACCGGAGCCTaGACCGCAGCCGCGCGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: PSAWTGALALAGGKPAWLFFTGA*TAAARL Trigger: TAGCCGCGCGGCTGCGGTCAAGGCTCCGGTGAAGAA...GAGCCATGCGGGTTTCCCGCCCGCCAGTGCCAAAGCTCCCGTCCAGGCGGAAGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009241.7 ENSMUST00000232143.2 ENSMUST00000232335.2 |
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| CDS-3UTR CAA 90 bp | GTAGTGGTCGTAGGCGGCGGCCGGGTACTTGTAGGGATGGTGGTGCAGCGGCTCTTCTTCACCGGAGCCTaGACCGCAGCCGCGCGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: VVVVGGGRVLVGMVVQRLFFTGA*TAAARL Trigger: TAGCCGCGCGGCTGCGGTCAAGGCTCCGGTGAAGAA...GAGCCGCTGCACCACCATCCCTACAAGTACCCGGCCGCCGCCTACGACCACTAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232143.2 |
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| CDS-3UTR CAA 90 bp | CGGTCGTCTACACTGCAATTGCCGGCCGGGCCGGAGGCGACGAGGTCTCGCGGACAATCCCGGAAGCCTTaGGCGAAGGGGTTGCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RSSTLQLPAGPEATRSRGQSRKP*AKGLLA Trigger: TGCCAGCAACCCCTTCGCCAAAGGCTTCCGGGATTG...TCCGCGAGACCTCGTCGCCTCCGGCCCGGCCGGCAATTGCAGTGTAGACGACCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
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| CDS GCA 90 bp | AGGCGACGGGGATCCCAGGCCGCTCAGACTGCTGGCTGCGAAGGCTaGAACGTCGCAGAAGTGCGAGAGCTGCGTGAGCCACGGACTAGA | + |
|
Preference number: 5 (lower is better) Translates to: RRRGSQAAQTAGCEG*NVAEVRELREPRTR Trigger: TCTAGTCCGTGGCTCACGCAGCTCTCGCACTTCTGCGACGTTGCAGCCTTCGCAGCCAGCAGTCTGAGCGGCCTGGGATCCCCGTCGCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000232143.2 ENSMUST00000232335.2 |
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| CDS-3UTR CAA 90 bp | AATAAATACCACTTCCTTCCGCCTGGACGGGAGCTTTGGCACTGGCGGGCGGGATTCTTCACCGGAGCCTaGACCGCAGCCGCGCGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: NKYHFLPPGRELWHWRAGFFTGA*TAAARL Trigger: TAGCCGCGCGGCTGCGGTCAAGGCTCCGGTGAAGAA...TCCCGCCCGCCAGTGCCAAAGCTCCCGTCCAGGCGGAAGGAAGTGGTATTTATT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009241.7 ENSMUST00000232143.2 ENSMUST00000232335.2 |
||
| CDS-3UTR CAA 90 bp | GGCGGGGCTCTCTCGGTCGTCTACACTGCAATTGCCGGCCGGGCCGGAGGCGACTCATCCAGCAGGTTATaGGTCAGTTTCAGCTTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: GGALSVVYTAIAGRAGGDSSSRL*VSFSLS Trigger: CGACAAGCTGAAACTGACCAATAACCTGCTGGATGA...GTCGCCTCCGGCCCGGCCGGCAATTGCAGTGTAGACGACCGAGAGAGCCCCGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
||
| CDS-3UTR CAA 90 bp | TCTCTCGGTCGTCTACACTGCAATTGCCGGCCGGGCCGGAGGCGACGAGGTCTCCCTTTGGCGAAGGGGTaGCTGGCAATCTTAAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SLGRLHCNCRPGRRRRGLPLAKG*LAILSC Trigger: GCAGCTTAAGATTGCCAGCAACCCCTTCGCCAAAGG...GAGACCTCGTCGCCTCCGGCCCGGCCGGCAATTGCAGTGTAGACGACCGAGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
||
| CDS-3UTR CAA 90 bp | AGGGGAAACGAAATTCTGGGCTGGTGCCAGGCCAGGGCAACGCTGGAAGAGCCGCAATCCCGGAAGCCTTaGGCGAAGGGGTTGCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RGNEILGWCQARATLEEPQSRKP*AKGLLA Trigger: TGCCAGCAACCCCTTCGCCAAAGGCTTCCGGGATTG...CGGCTCTTCCAGCGTTGCCCTGGCCTGGCACCAGCCCAGAATTTCGTTTCCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232335.2 |
||
| CDS-3UTR CAA 90 bp | TCTCGGTCGTCTACACTGCAATTGCCGGCCGGGCCGGAGGCGACGAGGTCTCGCTCATCCAGCAGGTTATaGGTCAGTTTCAGCTTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: SRSSTLQLPAGPEATRSRSSSRL*VSFSLS Trigger: CGACAAGCTGAAACTGACCAATAACCTGCTGGATGA...GCGAGACCTCGTCGCCTCCGGCCCGGCCGGCAATTGCAGTGTAGACGACCGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
||
| CDS-3UTR CAA 90 bp | CACTGCAATTGCCGGCCGGGCCGGAGGCGACGAGGTCTCGCGGAGAACAATAAACCTTTGGCGAAGGGGTaGCTGGCAATCTTAAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: HCNCRPGRRRRGLAENNKPLAKG*LAILSC Trigger: GCAGCTTAAGATTGCCAGCAACCCCTTCGCCAAAGG...TTTATTGTTCTCCGCGAGACCTCGTCGCCTCCGGCCCGGCCGGCAATTGCAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
||
| CDS-3UTR CAA 90 bp | CACGGGAGTTTCAAGATGACTCATGACCACTGTCATTGTGCGCCCCCACCCCCATCTTTGTCTGAGCCATaGGGCTGCGTGGGGGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: HGSFKMTHDHCHCAPPPPSLSEP*GCVGEA Trigger: GGCTTCCCCCACGCAGCCCAATGGCTCAGACAAAGA...TGGGGGTGGGGGCGCACAATGACAGTGGTCATGAGTCATCTTGAAACTCCCGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000232335.2 |
||
| CDS-3UTR CAA 90 bp | TACACTGCAATTGCCGGCCGGGCCGGAGGCGACGAGGTCTCGCGGAGAACAATAGAACATTCGTCTGCCTaGGTGACGATCATCTCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: YTAIAGRAGGDEVSRRTIEHSSA*VTIISV Trigger: CACCGAGATGATCGTCACCAAGGCAGACGAATGTTC...TATTGTTCTCCGCGAGACCTCGTCGCCTCCGGCCCGGCCGGCAATTGCAGTGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232143.2 |
||
| CDS-3UTR CAA 90 bp | GGGGCTCTCTCGGTCGTCTACACTGCAATTGCCGGCCGGGCCGGAGGCGACGAGTATCTGTGCATGGAGTaGAGAATAATATGGCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: GALSVVYTAIAGRAGGDEYLCME*RIIWPL Trigger: CAATGGCCATATTATTCTCAACTCCATGCACAGATA...CTCGTCGCCTCCGGCCCGGCCGGCAATTGCAGTGTAGACGACCGAGAGAGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
||
| CDS-3UTR CAA 90 bp | TACACCGCCCGCAGGCGGGGCTCTCTCGGTCGTCTACACTGCAATTGCCGGCCGTATCTGTGCATGGAGTaGAGAATAATATGGCCATTG | + |
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Preference number: 5 (lower is better) Translates to: YTARRRGSLGRLHCNCRPYLCME*RIIWPL Trigger: CAATGGCCATATTATTCTCAACTCCATGCACAGATA...CGGCCGGCAATTGCAGTGTAGACGACCGAGAGAGCCCCGCCTGCGGGCGGTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
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| CDS-3UTR CAA 90 bp | TACCACTTCCTTCCGCCTGGACGGGAGCTTTGGCACTGGCGGGCGGGAAACCCGAGAATAATATGGCCATaGTCATCCAGCAGGTTATTG | + |
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Preference number: 5 (lower is better) Translates to: YHFLPPGRELWHWRAGNPRIIWP*SSSRLL Trigger: CAATAACCTGCTGGATGACAATGGCCATATTATTCT...CGGGTTTCCCGCCCGCCAGTGCCAAAGCTCCCGTCCAGGCGGAAGGAAGTGGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
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| CDS-3UTR CAA 90 bp | TACACTGCAATTGCCGGCCGGGCCGGAGGCGACGAGGTCTCGCGGAGAACAATAAGAATAATATGGCCATaGTCATCCAGCAGGTTATTG | + |
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Preference number: 5 (lower is better) Translates to: YTAIAGRAGGDEVSRRTIRIIWP*SSSRLL Trigger: CAATAACCTGCTGGATGACAATGGCCATATTATTCT...TATTGTTCTCCGCGAGACCTCGTCGCCTCCGGCCCGGCCGGCAATTGCAGTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
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| CDS-3UTR CAA 90 bp | CCAAAAGAGGCAAAACCGTTTATGAAATCGGCGCCGGTGCAGTATCTACAGTATTCTTTGTCTGAGCCATaGGGCTGCGTGGGGGAAGCC | + |
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Preference number: 5 (lower is better) Translates to: PKEAKPFMKSAPVQYLQYSLSEP*GCVGEA Trigger: GGCTTCCCCCACGCAGCCCAATGGCTCAGACAAAGA...ATACTGTAGATACTGCACCGGCGCCGATTTCATAAACGGTTTTGCCTCTTTTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
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| CDS-3UTR CAA 90 bp | CGGCAATTTCCAAAAGAGGCAAAACCGTTTATGAAATCGGCGCCGGTGCAGTATTTGGTCAGTTTCAGCTaGTCGAAAGACACAATCTGT | + |
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Preference number: 5 (lower is better) Translates to: RQFPKEAKPFMKSAPVQYLVSFS*SKDTIC Trigger: ACAGATTGTGTCTTTCGACAAGCTGAAACTGACCAA...ATACTGCACCGGCGCCGATTTCATAAACGGTTTTGCCTCTTTTGGAAATTGCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
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| CDS-3UTR CAA 90 bp | ATTTCCAAAAGAGGCAAAACCGTTTATGAAATCGGCGCCGGTGCAGTATCTACATTGGTCAGTTTCAGCTaGTCGAAAGACACAATCTGT | + |
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Preference number: 5 (lower is better) Translates to: ISKRGKTVYEIGAGAVSTLVSFS*SKDTIC Trigger: ACAGATTGTGTCTTTCGACAAGCTGAAACTGACCAA...TGTAGATACTGCACCGGCGCCGATTTCATAAACGGTTTTGCCTCTTTTGGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232335.2 |
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| CDS CAA 90 bp | TGCACGCTCACGCTGGCCACCTTCGGGTTCTTCTTCACCGGAGCCTaGACCGCAGCCGCGCGGCTAGCCCCCGGACCCTCGGACTCCGCC | + |
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Preference number: 6 (lower is better) Translates to: CTLTLATFGFFFTGA*TAAARLAPGPSDSA Trigger: GGCGGAGTCCGAGGGTCCGGGGGCTAGCCGCGCGGCTGCGGTCAAGGCTCCGGTGAAGAAGAACCCGAAGGTGGCCAGCGTGAGCGTGCA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000009241.7 ENSMUST00000232143.2 ENSMUST00000232335.2 ENSMUST00000232589.2 |
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| CDS GCA 72 bp | CGGCGCCAGGCGACGGGGATCCCAGGCCGCTCAGACTaGTGGCTGCGAAGGCTGCAACGTCGCAGAAGTGCG | + |
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Preference number: 6 (lower is better) Translates to: RRQATGIPGRSD*WLRRLQRRRSA Trigger: CGCACTTCTGCGACGTTGCAGCCTTCGCAGCCAGCAGTCTGAGCGGCCTGGGATCCCCGTCGCCTGGCGCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000232143.2 ENSMUST00000232335.2 |
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| CDS CCA 72 bp | CGCCAGGCGACGGGGATCCCAGGCCGCTCAGACTGCTaGCTGCGAAGGCTGCAACGTCGCAGAAGTGCGAGA | + |
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Preference number: 6 (lower is better) Translates to: RQATGIPGRSDC*LRRLQRRRSAR Trigger: TCTCGCACTTCTGCGACGTTGCAGCCTTCGCAGCCAGCAGTCTGAGCGGCCTGGGATCCCCGTCGCCTGGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000232143.2 ENSMUST00000232335.2 |
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| CDS GCA 72 bp | AGGCGACGGGGATCCCAGGCCGCTCAGACTGCTGGCTaGGAAGGCTGCAACGTCGCAGAAGTGCGAGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: RRRGSQAAQTAG*EGCNVAEVREL Trigger: CAGCTCTCGCACTTCTGCGACGTTGCAGCCTTCGCAGCCAGCAGTCTGAGCGGCCTGGGATCCCCGTCGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000232143.2 ENSMUST00000232335.2 |
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| CDS GCA 72 bp | GGATCCCAGGCCGCTCAGACTGCTGGCTGCGAAGGCTaGAACGTCGCAGAAGTGCGAGAGCTGCGTGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: GSQAAQTAGCEG*NVAEVRELREP Trigger: TGGCTCACGCAGCTCTCGCACTTCTGCGACGTTGCAGCCTTCGCAGCCAGCAGTCTGAGCGGCCTGGGATCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000232143.2 ENSMUST00000232335.2 |
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| CDS GCA 72 bp | AGGCGACGGGGATCCCAGGCCGCTCAGACTGCTGGCTaGGAAGGCTTCCATGTCCCTGGTGACTGTGCTGAA | + |
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Preference number: 6 (lower is better) Translates to: RRRGSQAAQTAG*EGFHVPGDCAE Trigger: TTCAGCACAGTCACCAGGGACATGGAAGCCTTCGCAGCCAGCAGTCTGAGCGGCCTGGGATCCCCGTCGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009241.7 ENSMUST00000232589.2 |
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| CDS GCA 72 bp | AGACTGCTGGCTGCGAAGGCTGCAACGTCGCAGAAGTaGGAGAGCTGCGTGAGCCACGGACTAGACACGGCG | + |
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Preference number: 6 (lower is better) Translates to: RLLAAKAATSQK*ESCVSHGLDTA Trigger: CGCCGTGTCTAGTCCGTGGCTCACGCAGCTCTCGCACTTCTGCGACGTTGCAGCCTTCGCAGCCAGCAGTCT 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000232143.2 ENSMUST00000232335.2 |
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