Pregenerated sensors for TBRG1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000011114Ensembl transcript IDs: ENSMUST00000117654.3, ENSMUST00000142736.9
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGTGTCAACCAAGGGTTCGTGTGTCAGGAACTCTGGCTGGTAAGATaGCACAAAGGCTTCATGCTGAAGCTCAGGGAGGTCCAGGGAGCC | + |
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Preference number: 1 (lower is better) Translates to: SVNQGFVCQELWLVR*HKGFMLKLREVQGA Trigger: GGCTCCCTGGACCTCCCTGAGCTTCAGCATGAAGCCTTTGTGTCATCTTACCAGCCAGAGTTCCTGACACACGAACCCTTGGTTGACACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142736.9 |
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| 3UTR CCA 90 bp | CGTCTGTGTCTGGAAGGCTTCAAGGCTCATAGTTGCATCATTCTCTaGCAGTTCCTGAGAGAGCTGCCCCTTCCTGGGTTTGCACGCATC | + |
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Preference number: 1 (lower is better) Translates to: RLCLEGFKAHSCIIL*QFLRELPLPGFARI Trigger: GATGCGTGCAAACCCAGGAAGGGGCAGCTCTCTCAGGAACTGCCAGAGAATGATGCAACTATGAGCCTTGAAGCCTTCCAGACACAGACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142736.9 |
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| 3UTR GCA 90 bp | TGTTGTGGCACTGATGGCCCTGAGCAGTTCTTCATAACAGGCATCTaGAGAGGAGCCGACGATGGTATTCTGGGGGTCATCTTCAGGAAC | + |
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Preference number: 1 (lower is better) Translates to: CCGTDGPEQFFITGI*RGADDGILGVIFRN Trigger: GTTCCTGAAGATGACCCCCAGAATACCATCGTCGGCTCCTCTGCAGATGCCTGTTATGAAGAACTGCTCAGGGCCATCAGTGCCACAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142736.9 |
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| 3UTR CCA 90 bp | TACACCGCCGTCCTTGATCTGACAGGTATACAGACACTTCTGGTCTaGGCACTTCATGCTAGCATACACTCGGGTACTGCAGTAGCCCAC | + |
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Preference number: 1 (lower is better) Translates to: YTAVLDLTGIQTLLV*ALHASIHSGTAVAH Trigger: GTGGGCTACTGCAGTACCCGAGTGTATGCTAGCATGAAGTGCCCAGACCAGAAGTGTCTGTATACCTGTCAGATCAAGGACGGCGGTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142736.9 |
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| 3UTR GCA 90 bp | GTCATCATCAAACGTCTGTGTCTGGAAGGCTTCAAGGCTCATAGTTaGATCATTCTCTGGCAGTTCCTGAGAGAGCTGCCCCTTCCTGGG | + |
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Preference number: 1 (lower is better) Translates to: VIIKRLCLEGFKAHS*IILWQFLRELPLPG Trigger: CCCAGGAAGGGGCAGCTCTCTCAGGAACTGCCAGAGAATGATGCAACTATGAGCCTTGAAGCCTTCCAGACACAGACGTTTGATGATGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142736.9 |
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| 3UTR CCA 90 bp | AGGCTTCATGCTGAAGCTCAGGGAGGTCCAGGGAGCCTGGCAGAATaGAATCATCATGGTCATCATCAAACGTCTGTGTCTGGAAGGCTT | + |
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Preference number: 1 (lower is better) Translates to: RLHAEAQGGPGSLAE*NHHGHHQTSVSGRL Trigger: AAGCCTTCCAGACACAGACGTTTGATGATGACCATGATGATTCCATTCTGCCAGGCTCCCTGGACCTCCCTGAGCTTCAGCATGAAGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142736.9 |
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| 3UTR TCA 90 bp | ATAATGAGGAGAAGGCAGGGGGCTCCACCCCTTTCCTGTTCAATCTaGAGACTGAATTGGGCTACACTGGGATGGAGATTTCAGGTGCTG | + |
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Preference number: 1 (lower is better) Translates to: IMRRRQGAPPLSCSI*RLNWATLGWRFQVL Trigger: CAGCACCTGAAATCTCCATCCCAGTGTAGCCCAATTCAGTCTTCAGATTGAACAGGAAAGGGGTGGAGCCCCCTGCCTTCTCCTCATTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142736.9 |
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| 3UTR CCA 90 bp | AACCAGGGGGCAAGCCATCACCAGACATCTTGGACTTTGACTTCCTaGGCCCCCAAACTCTTGAAAGATAAATTCACTGTCTATAAGCTA | + |
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Preference number: 1 (lower is better) Translates to: NQGASHHQTSWTLTS*APKLLKDKFTVYKL Trigger: TAGCTTATAGACAGTGAATTTATCTTTCAAGAGTTTGGGGGCCCAGGAAGTCAAAGTCCAAGATGTCTGGTGATGGCTTGCCCCCTGGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000117654.3 |
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| 3UTR GCA 90 bp | GGAACACCCACAATGAAACGTGTATCTTCCCTGTTTCTCAGATGCTaGCTCCTTCCACAGAGTGAGTTTTCGTTTAAAACTCATAATGAG | + |
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Preference number: 1 (lower is better) Translates to: GTPTMKRVSSLFLRC*LLPQSEFSFKTHNE Trigger: CTCATTATGAGTTTTAAACGAAAACTCACTCTGTGGAAGGAGGCAGCATCTGAGAAACAGGGAAGATACACGTTTCATTGTGGGTGTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117654.3 ENSMUST00000142736.9 |
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| 3UTR GCA 90 bp | CTACCTGGCTTATTGTATTTTGTTATAGCAGCCGAACAGACTAAGTaGCTTTATAAAGACTTAAGTTCATCTCAGGGAGAGCTAAACAAA | + |
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Preference number: 1 (lower is better) Translates to: LPGLLYFVIAAEQTK*LYKDLSSSQGELNK Trigger: TTTGTTTAGCTCTCCCTGAGATGAACTTAAGTCTTTATAAAGGCACTTAGTCTGTTCGGCTGCTATAACAAAATACAATAAGCCAGGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117654.3 |
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| 3UTR-3UTR GCA 90 bp | GGCCCTGAGCAGTTCTTCATAACAGGCATCTGCAGAGGAGCCGACGATGGTATTTCAACAAAGGGGTGCTaGCAGTGGGAACAGGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: GPEQFFITGICRGADDGISTKGC*QWEQGK Trigger: CTTTCCCTGTTCCCACTGGCAGCACCCCTTTGTTGA...AATACCATCGTCGGCTCCTCTGCAGATGCCTGTTATGAAGAACTGCTCAGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142736.9 |
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| 3UTR-3UTR CCA 90 bp | CAGACACTTCTGGTCTGGGCACTTCATGCTAGCATACACTCGGGTACTGCAGTAAAGGGGTGCTGCCAGTaGGAACAGGGAAAGGCTCAA | + |
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Preference number: 2 (lower is better) Translates to: QTLLVWALHASIHSGTAVKGCCQ*EQGKAQ Trigger: TTGAGCCTTTCCCTGTTCCCACTGGCAGCACCCCTT...TACTGCAGTACCCGAGTGTATGCTAGCATGAAGTGCCCAGACCAGAAGTGTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142736.9 |
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| 3UTR-3UTR GCA 90 bp | CAGTGTCAACCAAGGGTTCGTGTGTCAGGAACTCTGGCTGGTAAGATGACACAAGCCCCTTCCTGGGTTTaGACGCATCAAATTTCACCC | + |
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Preference number: 2 (lower is better) Translates to: QCQPRVRVSGTLAGKMTQAPSWV*THQISP Trigger: GGGTGAAATTTGATGCGTGCAAACCCAGGAAGGGGC...TTGTGTCATCTTACCAGCCAGAGTTCCTGACACACGAACCCTTGGTTGACACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142736.9 |
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| 3UTR-3UTR CCA 90 bp | AAGTCGGCACCGCATGAAAGTGGGTTGGGCATCAGTTTCCCTGTTGTGGCACTGGTATACAGACACTTCTaGTCTGGGCACTTCATGCTA | + |
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Preference number: 2 (lower is better) Translates to: KSAPHESGLGISFPVVALVYRHF*SGHFML Trigger: TAGCATGAAGTGCCCAGACCAGAAGTGTCTGTATAC...CAGTGCCACAACAGGGAAACTGATGCCCAACCCACTTTCATGCGGTGCCGACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142736.9 |
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| 3UTR-3UTR TCA 90 bp | GCCCACAGGATAGATGGCATTCTCATCATGGAAGCCAGGTCGGTTGGTGATGATGTGAGAAGAGAAAACTaGCCTGGTTTGGAAGGGACT | + |
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Preference number: 2 (lower is better) Translates to: AHRIDGILIMEARSVGDDVRREN*PGLEGT Trigger: AGTCCCTTCCAAACCAGGTCAGTTTTCTCTTCTCAC...ATCATCACCAACCGACCTGGCTTCCATGATGAGAATGCCATCTATCCTGTGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142736.9 |
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| 3UTR-3UTR TCA 90 bp | AAACTGAGGCTGTACACCGCCGTCCTTGATCTGACAGGTATACAGACACTTCTGTGGGAACACCCACAATaGAACGTGTATCTTCCCTGT | + |
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Preference number: 2 (lower is better) Translates to: KLRLYTAVLDLTGIQTLLWEHPQ*NVYLPC Trigger: ACAGGGAAGATACACGTTTCATTGTGGGTGTTCCCA...CAGAAGTGTCTGTATACCTGTCAGATCAAGGACGGCGGTGTACAGCCTCAGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142736.9 |
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| 3UTR-3UTR CCA 90 bp | TCAGGTGCTGCAGGTCAGTGTCAACCAAGGGTTCGTGTGTCAGGAACTCTGGCTACAGTTTTGAGCTTCTaGACAACTCTGAATCAGGTT | + |
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Preference number: 2 (lower is better) Translates to: SGAAGQCQPRVRVSGTLATVLSF*TTLNQV Trigger: AACCTGATTCAGAGTTGTCCAGAAGCTCAAAACTGT...AGCCAGAGTTCCTGACACACGAACCCTTGGTTGACACTGACCTGCAGCACCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142736.9 |
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| 3UTR-3UTR CCA 90 bp | TCTTCCCTGTTTCTCAGATGCTGCCTCCTTCCACAGAGTGAGTTTTCGTTTAAACCGACGATGGTATTCTaGGGGTCATCTTCAGGAACA | + |
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Preference number: 2 (lower is better) Translates to: SSLFLRCCLLPQSEFSFKPTMVF*GSSSGT Trigger: TGTTCCTGAAGATGACCCCCAGAATACCATCGTCGG...TTTAAACGAAAACTCACTCTGTGGAAGGAGGCAGCATCTGAGAAACAGGGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142736.9 |
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| 3UTR-3UTR TCA 90 bp | ACTCCCTCCCATTATGCCGTCATAGCAAGACAGCAATCTAAGAACCAGGGGGCAAGAGCTAAACAAAAATaGTCATATCCCGACTACAAG | + |
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Preference number: 2 (lower is better) Translates to: TPSHYAVIARQQSKNQGARAKQK*SYPDYK Trigger: CTTGTAGTCGGGATATGATCATTTTTGTTTAGCTCT...TGCCCCCTGGTTCTTAGATTGCTGTCTTGCTATGACGGCATAATGGGAGGGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000117654.3 |
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| 3UTR-3UTR GCA 90 bp | GCCTTTAGAGGAACTTTGGGGCTGACAAAGAGTGATACAACAAACATAGAAGGTTCCCTGTTTCTCAGATaGTGCCTCCTTCCACAGAGT | + |
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Preference number: 2 (lower is better) Translates to: AFRGTLGLTKSDTTNIEGSLFLR*CLLPQS Trigger: ACTCTGTGGAAGGAGGCAGCATCTGAGAAACAGGGA...ACCTTCTATGTTTGTTGTATCACTCTTTGTCAGCCCCAAAGTTCCTCTAAAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142736.9 |
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| 3UTR-3UTR TCA 90 bp | TCTTCCCTGTTTCTCAGATGCTGCCTCCTTCCACAGAGTGAGTTTTCGTTTAAAGGGGCTGACAAAGAGTaGTACAACAAACATAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: SSLFLRCCLLPQSEFSFKGADKE*YNKHRR Trigger: CCTTCTATGTTTGTTGTATCACTCTTTGTCAGCCCC...TTTAAACGAAAACTCACTCTGTGGAAGGAGGCAGCATCTGAGAAACAGGGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142736.9 |
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| 3UTR TCA 72 bp | CAAGGGTTCGTGTGTCAGGAACTCTGGCTGGTAAGATaGCACAAAGGCTTCATGCTGAAGCTCAGGGAGGTC | + |
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Preference number: 3 (lower is better) Translates to: QGFVCQELWLVR*HKGFMLKLREV Trigger: GACCTCCCTGAGCTTCAGCATGAAGCCTTTGTGTCATCTTACCAGCCAGAGTTCCTGACACACGAACCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142736.9 |
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| 3UTR CCA 72 bp | GGGAGGTCCAGGGAGCCTGGCAGAATGGAATCATCATaGTCATCATCAAACGTCTGTGTCTGGAAGGCTTCA | + |
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Preference number: 3 (lower is better) Translates to: GRSREPGRMESS*SSSNVCVWKAS Trigger: TGAAGCCTTCCAGACACAGACGTTTGATGATGACCATGATGATTCCATTCTGCCAGGCTCCCTGGACCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142736.9 |
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| 3UTR CCA 72 bp | GCTGAAGCTCAGGGAGGTCCAGGGAGCCTGGCAGAATaGAATCATCATGGTCATCATCAAACGTCTGTGTCT | + |
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Preference number: 3 (lower is better) Translates to: AEAQGGPGSLAE*NHHGHHQTSVS Trigger: AGACACAGACGTTTGATGATGACCATGATGATTCCATTCTGCCAGGCTCCCTGGACCTCCCTGAGCTTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142736.9 |
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| 3UTR-3UTR CAA 90 bp | TCAGGTGCTGCAGGTCAGTGTCAACCAAGGGTTCGTGTGTCAGGAACTCTGGCTTGGAAGCCAGGTCGGTaGGTGATGATCTATAAAAGA | + |
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Preference number: 3 (lower is better) Translates to: SGAAGQCQPRVRVSGTLAWKPGR*VMIYKR Trigger: TCTTTTATAGATCATCACCAACCGACCTGGCTTCCA...AGCCAGAGTTCCTGACACACGAACCCTTGGTTGACACTGACCTGCAGCACCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142736.9 |
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| 3UTR TCA 72 bp | AGAAGGCAGGGGGCTCCACCCCTTTCCTGTTCAATCTaGAGACTGAATTGGGCTACACTGGGATGGAGATTT | + |
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Preference number: 3 (lower is better) Translates to: RRQGAPPLSCSI*RLNWATLGWRF Trigger: AAATCTCCATCCCAGTGTAGCCCAATTCAGTCTTCAGATTGAACAGGAAAGGGGTGGAGCCCCCTGCCTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142736.9 |
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| 3UTR GCA 72 bp | AAACGTCTGTGTCTGGAAGGCTTCAAGGCTCATAGTTaGATCATTCTCTGGCAGTTCCTGAGAGAGCTGCCC | + |
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Preference number: 3 (lower is better) Translates to: KRLCLEGFKAHS*IILWQFLRELP Trigger: GGGCAGCTCTCTCAGGAACTGCCAGAGAATGATGCAACTATGAGCCTTGAAGCCTTCCAGACACAGACGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142736.9 |
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| 3UTR-3UTR CAA 90 bp | CCAAGAACTCCCTCCCATTATGCCGTCATAGCAAGACAGCAATCTAAGAACCAGCAGACATCTTGGACTTaGACTTCCTGGGCCCCCAAA | + |
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Preference number: 3 (lower is better) Translates to: PRTPSHYAVIARQQSKNQQTSWT*TSWAPK Trigger: TTTGGGGGCCCAGGAAGTCAAAGTCCAAGATGTCTG...CTGGTTCTTAGATTGCTGTCTTGCTATGACGGCATAATGGGAGGGAGTTCTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117654.3 |
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| 3UTR TCA 72 bp | GAACAATTTCAAACTGAGGCTGTACACCGCCGTCCTTaGTCTGACAGGTATACAGACACTTCTGGTCTGGGC | + |
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Preference number: 3 (lower is better) Translates to: EQFQTEAVHRRP*SDRYTDTSGLG Trigger: GCCCAGACCAGAAGTGTCTGTATACCTGTCAGATCAAGGACGGCGGTGTACAGCCTCAGTTTGAAATTGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142736.9 |
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| 3UTR CCA 72 bp | GTCCTTGATCTGACAGGTATACAGACACTTCTGGTCTaGGCACTTCATGCTAGCATACACTCGGGTACTGCA | + |
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Preference number: 3 (lower is better) Translates to: VLDLTGIQTLLV*ALHASIHSGTA Trigger: TGCAGTACCCGAGTGTATGCTAGCATGAAGTGCCCAGACCAGAAGTGTCTGTATACCTGTCAGATCAAGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142736.9 |
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| 3UTR CCA 72 bp | GCAAGCCATCACCAGACATCTTGGACTTTGACTTCCTaGGCCCCCAAACTCTTGAAAGATAAATTCACTGTC | + |
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Preference number: 3 (lower is better) Translates to: ASHHQTSWTLTS*APKLLKDKFTV Trigger: GACAGTGAATTTATCTTTCAAGAGTTTGGGGGCCCAGGAAGTCAAAGTCCAAGATGTCTGGTGATGGCTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117654.3 |
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| 3UTR CCA 72 bp | GTTCTTCATAACAGGCATCTGCAGAGGAGCCGACGATaGTATTCTGGGGGTCATCTTCAGGAACAATTTCAA | + |
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Preference number: 3 (lower is better) Translates to: VLHNRHLQRSRR*YSGGHLQEQFQ Trigger: TTGAAATTGTTCCTGAAGATGACCCCCAGAATACCATCGTCGGCTCCTCTGCAGATGCCTGTTATGAAGAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142736.9 |
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| 3UTR GCA 72 bp | CCCACAATGAAACGTGTATCTTCCCTGTTTCTCAGATaGTGCCTCCTTCCACAGAGTGAGTTTTCGTTTAAA | + |
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Preference number: 3 (lower is better) Translates to: PTMKRVSSLFLR*CLLPQSEFSFK Trigger: TTTAAACGAAAACTCACTCTGTGGAAGGAGGCAGCATCTGAGAAACAGGGAAGATACACGTTTCATTGTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117654.3 ENSMUST00000142736.9 |
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| 3UTR CCA 72 bp | TTTCACCCACTGGTAATTGACACAGTTTTGAGCTTCTaGACAACTCTGAATCAGGTTGTGGATGGTTGGATG | + |
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Preference number: 3 (lower is better) Translates to: FHPLVIDTVLSF*TTLNQVVDGWM Trigger: CATCCAACCATCCACAACCTGATTCAGAGTTGTCCAGAAGCTCAAAACTGTGTCAATTACCAGTGGGTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142736.9 |
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| 3UTR CCA 72 bp | ATGGAATCATCATGGTCATCATCAAACGTCTGTGTCTaGAAGGCTTCAAGGCTCATAGTTGCATCATTCTCT | + |
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Preference number: 3 (lower is better) Translates to: MESSWSSSNVCV*KASRLIVASFS Trigger: AGAGAATGATGCAACTATGAGCCTTGAAGCCTTCCAGACACAGACGTTTGATGATGACCATGATGATTCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142736.9 |
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| 3UTR GCA 72 bp | ACAATGAAACGTGTATCTTCCCTGTTTCTCAGATGCTaGCTCCTTCCACAGAGTGAGTTTTCGTTTAAAACT | + |
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Preference number: 3 (lower is better) Translates to: TMKRVSSLFLRC*LLPQSEFSFKT Trigger: AGTTTTAAACGAAAACTCACTCTGTGGAAGGAGGCAGCATCTGAGAAACAGGGAAGATACACGTTTCATTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117654.3 ENSMUST00000142736.9 |
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| 3UTR TCA 72 bp | AGACTTAAGTTCATCTCAGGGAGAGCTAAACAAAAATaGTCATATCCCGACTACAAGAAGAAACAAATAACC | + |
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Preference number: 3 (lower is better) Translates to: RLKFISGRAKQK*SYPDYKKKQIT Trigger: GGTTATTTGTTTCTTCTTGTAGTCGGGATATGATCATTTTTGTTTAGCTCTCCCTGAGATGAACTTAAGTCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117654.3 |
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| CDS-3UTR GCA 90 bp | TCAGGTGCTGCAGGTCAGTGTCAACCAAGGGTTCGTGTGTCAGGAACTCTGGCTCTGGGCCCGGCTCCCTaGATAGTTCCCACAGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: SGAAGQCQPRVRVSGTLALGPAP*IVPTEL Trigger: CAGCTCTGTGGGAACTATGCAGGGAGCCGGGCCCAG...AGCCAGAGTTCCTGACACACGAACCCTTGGTTGACACTGACCTGCAGCACCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142736.9 |
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| CDS-3UTR CCA 90 bp | TATGGATCAACAAAGGGGTGCTGCCAGTGGGAACAGGGAAAGGCTCAACCCCACAAGGCAGGGGCAAACTaGAGCTGTGGGAAGGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: YGSTKGCCQWEQGKAQPHKAGAN*SCGKEQ Trigger: CTGCTCCTTCCCACAGCTCCAGTTTGCCCCTGCCTT...GTGGGGTTGAGCCTTTCCCTGTTCCCACTGGCAGCACCCCTTTGTTGATCCATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000142736.9 |
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| CDS-3UTR CCA 90 bp | ACACCCACAATGAAACGTGTATCTTCCCTGTTTCTCAGATGCTGCCTCCTTCCATCATCCTGGCCTTGCTaGACAGCGGGGTGCGCGGCT | + |
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Preference number: 4 (lower is better) Translates to: TPTMKRVSSLFLRCCLLPSSWPC*TAGCAA Trigger: AGCCGCGCACCCCGCTGTCCAGCAAGGCCAGGATGA...TGGAAGGAGGCAGCATCTGAGAAACAGGGAAGATACACGTTTCATTGTGGGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117654.3 ENSMUST00000142736.9 |
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| CDS-3UTR GCA 90 bp | GAGGTTTACCCTGGGAACACCCACAATGAAACGTGTATCTTCCCTGTTTCTCAGCTGGGCCCGGCTCCCTaGATAGTTCCCACAGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: EVYPGNTHNETCIFPVSQLGPAP*IVPTEL Trigger: CAGCTCTGTGGGAACTATGCAGGGAGCCGGGCCCAG...CTGAGAAACAGGGAAGATACACGTTTCATTGTGGGTGTTCCCAGGGTAAACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117654.3 ENSMUST00000142736.9 |
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| 3UTR CAA 72 bp | GAAAACCCAAAGAAGTCGGCACCGCATGAAAGTGGGTaGGGCATCAGTTTCCCTGTTGTGGCACTGATGGCC | + |
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Preference number: 4 (lower is better) Translates to: ENPKKSAPHESG*GISFPVVALMA Trigger: GGCCATCAGTGCCACAACAGGGAAACTGATGCCCAACCCACTTTCATGCGGTGCCGACTTCTTTGGGTTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142736.9 |
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| CDS-3UTR GCA 90 bp | AATTTCAAACTGAGGCTGTACACCGCCGTCCTTGATCTGACAGGTATACAGACACACCGTGGCCTTAGCTaGTCTGCGCAGCCGCAGGTA | + |
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Preference number: 4 (lower is better) Translates to: NFKLRLYTAVLDLTGIQTHRGLS*SAQPQV Trigger: TACCTGCGGCTGCGCAGAGCAGCTAAGGCCACGGTG...TGTCTGTATACCTGTCAGATCAAGGACGGCGGTGTACAGCCTCAGTTTGAAATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142736.9 |
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| CDS-3UTR CCA 90 bp | GAGGTTTACCCTGGGAACACCCACAATGAAACGTGTATCTTCCCTGTTTCTCAGGGAGCCTTTTCATCCTaGCCTTGCTGGACAGCGGGG | + |
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Preference number: 4 (lower is better) Translates to: EVYPGNTHNETCIFPVSQGAFSS*PCWTAG Trigger: CCCCGCTGTCCAGCAAGGCCAGGATGAAAAGGCTCC...CTGAGAAACAGGGAAGATACACGTTTCATTGTGGGTGTTCCCAGGGTAAACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117654.3 ENSMUST00000142736.9 |
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| CDS-3UTR TCA 90 bp | ACCCACAATGAAACGTGTATCTTCCCTGTTTCTCAGATGCTGCCTCCTTCCACATTCCCACAGAGCTGGTaGCACCATAAGGCAGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: THNETCIFPVSQMLPPSTFPQSW*HHKAGA Trigger: TGCCCCTGCCTTATGGTGTCACCAGCTCTGTGGGAA...TGTGGAAGGAGGCAGCATCTGAGAAACAGGGAAGATACACGTTTCATTGTGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117654.3 ENSMUST00000142736.9 |
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| CDS-3UTR CCA 90 bp | GCCTTTAGAGGAACTTTGGGGCTGACAAAGAGTGATACAACAAACATAGAAGGTTCATCCTGGCCTTGCTaGACAGCGGGGTGCGCGGCT | + |
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Preference number: 4 (lower is better) Translates to: AFRGTLGLTKSDTTNIEGSSWPC*TAGCAA Trigger: AGCCGCGCACCCCGCTGTCCAGCAAGGCCAGGATGA...ACCTTCTATGTTTGTTGTATCACTCTTTGTCAGCCCCAAAGTTCCTCTAAAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142736.9 |
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| CDS-3UTR CCA 90 bp | AAACGTGTATCTTCCCTGTTTCTCAGATGCTGCCTCCTTCCACAGAGTGAGTTTGGAGCCTTTTCATCCTaGCCTTGCTGGACAGCGGGG | + |
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Preference number: 4 (lower is better) Translates to: KRVSSLFLRCCLLPQSEFGAFSS*PCWTAG Trigger: CCCCGCTGTCCAGCAAGGCCAGGATGAAAAGGCTCC...AAACTCACTCTGTGGAAGGAGGCAGCATCTGAGAAACAGGGAAGATACACGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117654.3 ENSMUST00000142736.9 |
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| CDS-3UTR CCA 90 bp | TCCTGGGCCCCCAAACTCTTGAAAGATAAATTCACTGTCTATAAGCTACCTGGCGGCAAACTGGAGCTGTaGGAAGGAGCAGCGGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SWAPKLLKDKFTVYKLPGGKLEL*EGAAAC Trigger: ACAGGCCGCTGCTCCTTCCCACAGCTCCAGTTTGCC...GCCAGGTAGCTTATAGACAGTGAATTTATCTTTCAAGAGTTTGGGGGCCCAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117654.3 |
||
| CDS-3UTR TCA 90 bp | ACACCCACAATGAAACGTGTATCTTCCCTGTTTCTCAGATGCTGCCTCCTTCCAACAAAGGCTTCATGCTaGAGCTCAGGGAGGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TPTMKRVSSLFLRCCLLPTKASC*SSGRSR Trigger: CCTGGACCTCCCTGAGCTTCAGCATGAAGCCTTTGT...TGGAAGGAGGCAGCATCTGAGAAACAGGGAAGATACACGTTTCATTGTGGGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117654.3 |
||
| CDS-3UTR CCA 90 bp | CAAGCAACTGAGGTTTACCCTGGGAACACCCACAATGAAACGTGTATCTTCCCTCGGTACTTCTCGTTCTaGCTCTTCCTCGGGAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QATEVYPGNTHNETCIFPRYFSF*LFLGSL Trigger: AAGGCTCCCGAGGAAGAGCCAGAACGAGAAGTACCG...AGGGAAGATACACGTTTCATTGTGGGTGTTCCCAGGGTAAACCTCAGTTGCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117654.3 ENSMUST00000142736.9 |
||
| CDS-3UTR CCA 90 bp | TCCCTGTTTCTCAGATGCTGCCTCCTTCCACAGAGTGAGTTTTCGTTTAAAACTGGCAAACTGGAGCTGTaGGAAGGAGCAGCGGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLFLRCCLLPQSEFSFKTGKLEL*EGAAAC Trigger: ACAGGCCGCTGCTCCTTCCCACAGCTCCAGTTTGCC...AGTTTTAAACGAAAACTCACTCTGTGGAAGGAGGCAGCATCTGAGAAACAGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117654.3 ENSMUST00000142736.9 |
||
| CDS-3UTR CCA 90 bp | TTCTTCATAACAGGCATCTGCAGAGGAGCCGACGATGGTATTCTGGGGGTCATCAAGGATCCAGGGCAATaGGTCGAACCAGTTTTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: FFITGICRGADDGILGVIKDPGQ*VEPVFE Trigger: CTCGAAAACTGGTTCGACCCATTGCCCTGGATCCTT...GATGACCCCCAGAATACCATCGTCGGCTCCTCTGCAGATGCCTGTTATGAAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142736.9 |
||
| CDS-3UTR CCA 90 bp | AATTTCAAACTGAGGCTGTACACCGCCGTCCTTGATCTGACAGGTATACAGACAAGCCTGGCCATATGCTaGTCTCACTCACCTCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NFKLRLYTAVLDLTGIQTSLAIC*SHSPPP Trigger: TGGGGGAGGTGAGTGAGACCAGCATATGGCCAGGCT...TGTCTGTATACCTGTCAGATCAAGGACGGCGGTGTACAGCCTCAGTTTGAAATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142736.9 |
||
| CDS-3UTR GCA 90 bp | CCAAGAACTCCCTCCCATTATGCCGTCATAGCAAGACAGCAATCTAAGAACCAGGCCCCTTCCTGGGTTTaGACGCATCAAATTTCACCC | + |
|
Preference number: 4 (lower is better) Translates to: PRTPSHYAVIARQQSKNQAPSWV*THQISP Trigger: GGGTGAAATTTGATGCGTGCAAACCCAGGAAGGGGC...CTGGTTCTTAGATTGCTGTCTTGCTATGACGGCATAATGGGAGGGAGTTCTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117654.3 |
||
| CDS-3UTR CCA 90 bp | GCCTCCTTCCACAGAGTGAGTTTTCGTTTAAAACTCATAATGAGGAGAAGGCAGAAGGCAGGGGCAAACTaGAGCTGTGGGAAGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ASFHRVSFRLKLIMRRRQKAGAN*SCGKEQ Trigger: CTGCTCCTTCCCACAGCTCCAGTTTGCCCCTGCCTT...CTGCCTTCTCCTCATTATGAGTTTTAAACGAAAACTCACTCTGTGGAAGGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000117654.3 ENSMUST00000142736.9 |
||
| CDS-3UTR CCA 90 bp | CAAGCAACTGAGGTTTACCCTGGGAACACCCACAATGAAACGTGTATCTTCCCTGAGGTCCAGGGAGCCTaGCAGAATGGAATCATCATG | + |
|
Preference number: 4 (lower is better) Translates to: QATEVYPGNTHNETCIFPEVQGA*QNGIIM Trigger: CATGATGATTCCATTCTGCCAGGCTCCCTGGACCTC...AGGGAAGATACACGTTTCATTGTGGGTGTTCCCAGGGTAAACCTCAGTTGCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117654.3 |
||
| CDS-3UTR TCA 90 bp | TACAAGCAACTGAGGTTTACCCTGGGAACACCCACAATGAAACGTGTATCTTCCGTACACCGCCGTCCTTaGTCTGACAGGTATACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: YKQLRFTLGTPTMKRVSSVHRRP*SDRYTD Trigger: GTCTGTATACCTGTCAGATCAAGGACGGCGGTGTAC...GGAAGATACACGTTTCATTGTGGGTGTTCCCAGGGTAAACCTCAGTTGCTTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117654.3 |
||
| CDS-3UTR TCA 90 bp | ACACCCACAATGAAACGTGTATCTTCCCTGTTTCTCAGATGCTGCCTCCTTCCACTCTGGCTGGTAAGATaGCACAAAGGCTTCATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TPTMKRVSSLFLRCCLLPLWLVR*HKGFML Trigger: CAGCATGAAGCCTTTGTGTCATCTTACCAGCCAGAG...TGGAAGGAGGCAGCATCTGAGAAACAGGGAAGATACACGTTTCATTGTGGGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117654.3 |
||
| CDS-3UTR CCA 90 bp | AAACGTGTATCTTCCCTGTTTCTCAGATGCTGCCTCCTTCCACAGAGTGAGTTTGGATTTCTTCGCAAATaGTTCCTCGGCCCCAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KRVSSLFLRCCLLPQSEFGFLRK*FLGPSA Trigger: AGCACTGGGGCCGAGGAACCATTTGCGAAGAAATCC...AAACTCACTCTGTGGAAGGAGGCAGCATCTGAGAAACAGGGAAGATACACGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117654.3 ENSMUST00000142736.9 |
||
| CDS-3UTR CCA 90 bp | ATCAAATTTCACCCACTGGTAATTGACACAGTTTTGAGCTTCTGGACAACTCTGGACCCCCTAGTCCGATaGGGAACACAGGCTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: IKFHPLVIDTVLSFWTTLDPLVR*GTQAVL Trigger: CAGGACAGCCTGTGTTCCCCATCGGACTAGGGGGTC...CAGAGTTGTCCAGAAGCTCAAAACTGTGTCAATTACCAGTGGGTGAAATTTGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142736.9 |
||
| CDS-3UTR CCA 90 bp | TACAAGCAACTGAGGTTTACCCTGGGAACACCCACAATGAAACGTGTATCTTCCTGGGCTACACTGGGATaGAGATTTCAGGTGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: YKQLRFTLGTPTMKRVSSWATLG*RFQVLQ Trigger: CTGCAGCACCTGAAATCTCCATCCCAGTGTAGCCCA...GGAAGATACACGTTTCATTGTGGGTGTTCCCAGGGTAAACCTCAGTTGCTTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117654.3 |
||
| CDS-3UTR GCA 90 bp | TCCTGGGCCCCCAAACTCTTGAAAGATAAATTCACTGTCTATAAGCTACCTGGCGGAGATTTCAGGTGCTaGAGGTCAGTGTCAACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SWAPKLLKDKFTVYKLPGGDFRC*RSVSTK Trigger: CTTGGTTGACACTGACCTGCAGCACCTGAAATCTCC...GCCAGGTAGCTTATAGACAGTGAATTTATCTTTCAAGAGTTTGGGGGCCCAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117654.3 |
||
| CDS-3UTR CCA 90 bp | AAACTGAGGCTGTACACCGCCGTCCTTGATCTGACAGGTATACAGACACTTCTGGTTAGAGCATGTATCTaGAGGAGCTTCTTCAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: KLRLYTAVLDLTGIQTLLVRACI*RSFFSK Trigger: CTTGCTGAAGAAGCTCCTCCAGATACATGCTCTAAC...CAGAAGTGTCTGTATACCTGTCAGATCAAGGACGGCGGTGTACAGCCTCAGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142736.9 |
||
| CDS-3UTR CCA 90 bp | ATGGATCAACAAAGGGGTGCTGCCAGTGGGAACAGGGAAAGGCTCAACCCCACTCTTTCTTCTCCTTCTTaGATTTCTTCGCAAATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: MDQQRGAASGNRERLNPTLSSPS*ISSQMV Trigger: AACCATTTGCGAAGAAATCCAAGAAGGAGAAGAAAG...AGTGGGGTTGAGCCTTTCCCTGTTCCCACTGGCAGCACCCCTTTGTTGATCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142736.9 |
||
| CDS-3UTR CCA 90 bp | AAACGTGTATCTTCCCTGTTTCTCAGATGCTGCCTCCTTCCACAGAGTGAGTTTAAGGATCCAGGGCAATaGGTCGAACCAGTTTTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: KRVSSLFLRCCLLPQSEFKDPGQ*VEPVFE Trigger: CTCGAAAACTGGTTCGACCCATTGCCCTGGATCCTT...AAACTCACTCTGTGGAAGGAGGCAGCATCTGAGAAACAGGGAAGATACACGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117654.3 ENSMUST00000142736.9 |
||
| CDS-3UTR CCA 90 bp | TTTCTCAGATGCTGCCTCCTTCCACAGAGTGAGTTTTCGTTTAAAACTCATAATGACCCCCTAGTCCGATaGGGAACACAGGCTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLRCCLLPQSEFSFKTHNDPLVR*GTQAVL Trigger: CAGGACAGCCTGTGTTCCCCATCGGACTAGGGGGTC...ATTATGAGTTTTAAACGAAAACTCACTCTGTGGAAGGAGGCAGCATCTGAGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000117654.3 ENSMUST00000142736.9 |
||
| CDS-3UTR CCA 90 bp | CAAGCAACTGAGGTTTACCCTGGGAACACCCACAATGAAACGTGTATCTTCCCTCAGACACTTCTGGTCTaGGCACTTCATGCTAGCATA | + |
|
Preference number: 4 (lower is better) Translates to: QATEVYPGNTHNETCIFPQTLLV*ALHASI Trigger: TATGCTAGCATGAAGTGCCCAGACCAGAAGTGTCTG...AGGGAAGATACACGTTTCATTGTGGGTGTTCCCAGGGTAAACCTCAGTTGCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117654.3 |
||
| CDS-3UTR CCA 90 bp | TCCTGGGCCCCCAAACTCTTGAAAGATAAATTCACTGTCTATAAGCTACCTGGCCCGACGATGGTATTCTaGGGGTCATCTTCAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: SWAPKLLKDKFTVYKLPGPTMVF*GSSSGT Trigger: TGTTCCTGAAGATGACCCCCAGAATACCATCGTCGG...GCCAGGTAGCTTATAGACAGTGAATTTATCTTTCAAGAGTTTGGGGGCCCAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117654.3 |
||
| CDS-3UTR CCA 90 bp | CCAAGAACTCCCTCCCATTATGCCGTCATAGCAAGACAGCAATCTAAGAACCAGAGTTGCATCATTCTCTaGCAGTTCCTGAGAGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PRTPSHYAVIARQQSKNQSCIIL*QFLREL Trigger: CAGCTCTCTCAGGAACTGCCAGAGAATGATGCAACT...CTGGTTCTTAGATTGCTGTCTTGCTATGACGGCATAATGGGAGGGAGTTCTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117654.3 |
||
| CDS-3UTR TCA 90 bp | TTTCTCAGATGCTGCCTCCTTCCACAGAGTGAGTTTTCGTTTAAAACTCATAATTTCCCACAGAGCTGGTaGCACCATAAGGCAGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FLRCCLLPQSEFSFKTHNFPQSW*HHKAGA Trigger: TGCCCCTGCCTTATGGTGTCACCAGCTCTGTGGGAA...ATTATGAGTTTTAAACGAAAACTCACTCTGTGGAAGGAGGCAGCATCTGAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000117654.3 ENSMUST00000142736.9 |
||
| CDS-3UTR TCA 90 bp | CCAAGAACTCCCTCCCATTATGCCGTCATAGCAAGACAGCAATCTAAGAACCAGTTGTGGATGGTTGGATaGGAAAACCCAAAGAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: PRTPSHYAVIARQQSKNQLWMVG*ENPKKS Trigger: CGACTTCTTTGGGTTTTCTCATCCAACCATCCACAA...CTGGTTCTTAGATTGCTGTCTTGCTATGACGGCATAATGGGAGGGAGTTCTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117654.3 |
||
| CDS-3UTR GCA 90 bp | ATCATATCCCGACTACAAGAAGAAACAAATAACCGAAACTGCCAGGATATATTTCACCGTGGCCTTAGCTaGTCTGCGCAGCCGCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: IISRLQEETNNRNCQDIFHRGLS*SAQPQV Trigger: TACCTGCGGCTGCGCAGAGCAGCTAAGGCCACGGTG...AAATATATCCTGGCAGTTTCGGTTATTTGTTTCTTCTTGTAGTCGGGATATGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117654.3 |
||
| CDS-3UTR GCA 90 bp | GCAGAGGAGCCGACGATGGTATTCTGGGGGTCATCTTCAGGAACAATTTCAAACTCAGAACTTCCAGTTTaGTGTTCTCCTTGCCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: AEEPTMVFWGSSSGTISNSELPV*CSPCPF Trigger: AAAAGGGCAAGGAGAACAGCAAACTGGAAGTTCTGA...GTTTGAAATTGTTCCTGAAGATGACCCCCAGAATACCATCGTCGGCTCCTCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142736.9 |
||
| CDS-3UTR CCA 90 bp | GCCTCCTTCCACAGAGTGAGTTTTCGTTTAAAACTCATAATGAGGAGAAGGCAGATGGCATTCTCATCATaGAAGCCAGGTCGGTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ASFHRVSFRLKLIMRRRQMAFSS*KPGRLV Trigger: CACCAACCGACCTGGCTTCCATGATGAGAATGCCAT...CTGCCTTCTCCTCATTATGAGTTTTAAACGAAAACTCACTCTGTGGAAGGAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117654.3 |
||
| CDS-3UTR CCA 90 bp | GAGGTTTACCCTGGGAACACCCACAATGAAACGTGTATCTTCCCTGTTTCTCAGGTATACAGACACTTCTaGTCTGGGCACTTCATGCTA | + |
|
Preference number: 4 (lower is better) Translates to: EVYPGNTHNETCIFPVSQVYRHF*SGHFML Trigger: TAGCATGAAGTGCCCAGACCAGAAGTGTCTGTATAC...CTGAGAAACAGGGAAGATACACGTTTCATTGTGGGTGTTCCCAGGGTAAACCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117654.3 |
||
| CDS-3UTR CCA 90 bp | TACAAGCAACTGAGGTTTACCCTGGGAACACCCACAATGAAACGTGTATCTTCCGGGAGCCTGGCAGAATaGAATCATCATGGTCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: YKQLRFTLGTPTMKRVSSGSLAE*NHHGHH Trigger: ATGATGACCATGATGATTCCATTCTGCCAGGCTCCC...GGAAGATACACGTTTCATTGTGGGTGTTCCCAGGGTAAACCTCAGTTGCTTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117654.3 |
||
| CDS-3UTR CCA 90 bp | AAACGTGTATCTTCCCTGTTTCTCAGATGCTGCCTCCTTCCACAGAGTGAGTTTGTTAGAGCATGTATCTaGAGGAGCTTCTTCAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: KRVSSLFLRCCLLPQSEFVRACI*RSFFSK Trigger: CTTGCTGAAGAAGCTCCTCCAGATACATGCTCTAAC...AAACTCACTCTGTGGAAGGAGGCAGCATCTGAGAAACAGGGAAGATACACGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117654.3 ENSMUST00000142736.9 |
||
| CDS-3UTR GCA 90 bp | TACAAGCAACTGAGGTTTACCCTGGGAACACCCACAATGAAACGTGTATCTTCCTCAGAACTTCCAGTTTaGTGTTCTCCTTGCCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: YKQLRFTLGTPTMKRVSSSELPV*CSPCPF Trigger: AAAAGGGCAAGGAGAACAGCAAACTGGAAGTTCTGA...GGAAGATACACGTTTCATTGTGGGTGTTCCCAGGGTAAACCTCAGTTGCTTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117654.3 ENSMUST00000142736.9 |
||
| CDS-3UTR CCA 90 bp | GCCGACGATGGTATTCTGGGGGTCATCTTCAGGAACAATTTCAAACTGAGGCTGCAATTTCATCACAGATaGAAGCATTTTCAAACACCG | + |
|
Preference number: 4 (lower is better) Translates to: ADDGILGVIFRNNFKLRLQFHHR*KHFQTP Trigger: CGGTGTTTGAAAATGCTTCCATCTGTGATGAAATTG...CAGCCTCAGTTTGAAATTGTTCCTGAAGATGACCCCCAGAATACCATCGTCGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142736.9 |
||
| CDS-3UTR CCA 90 bp | ACAATGAAACGTGTATCTTCCCTGTTTCTCAGATGCTGCCTCCTTCCACAGAGTCAGGTTGTGGATGGTTaGATGAGAAAACCCAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TMKRVSSLFLRCCLLPQSQVVDG*MRKPKE Trigger: TTCTTTGGGTTTTCTCATCCAACCATCCACAACCTG...ACTCTGTGGAAGGAGGCAGCATCTGAGAAACAGGGAAGATACACGTTTCATTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117654.3 |
||
| 3UTR CAA 72 bp | ACATCTTGGACTTTGACTTCCTGGGCCCCCAAACTCTaGAAAGATAAATTCACTGTCTATAAGCTACCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TSWTLTSWAPKL*KDKFTVYKLPG Trigger: GCCAGGTAGCTTATAGACAGTGAATTTATCTTTCAAGAGTTTGGGGGCCCAGGAAGTCAAAGTCCAAGATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117654.3 |
||
| CDS-3UTR GCA 90 bp | GCCTCCTTCCACAGAGTGAGTTTTCGTTTAAAACTCATAATGAGGAGAAGGCAGTTCAAGGCTCATAGTTaGATCATTCTCTGGCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ASFHRVSFRLKLIMRRRQFKAHS*IILWQF Trigger: GAACTGCCAGAGAATGATGCAACTATGAGCCTTGAA...CTGCCTTCTCCTCATTATGAGTTTTAAACGAAAACTCACTCTGTGGAAGGAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117654.3 |
||
| CDS-3UTR CCA 90 bp | ACACCCACAATGAAACGTGTATCTTCCCTGTTTCTCAGATGCTGCCTCCTTCCACAATTTCATCACAGATaGAAGCATTTTCAAACACCG | + |
|
Preference number: 4 (lower is better) Translates to: TPTMKRVSSLFLRCCLLPQFHHR*KHFQTP Trigger: CGGTGTTTGAAAATGCTTCCATCTGTGATGAAATTG...TGGAAGGAGGCAGCATCTGAGAAACAGGGAAGATACACGTTTCATTGTGGGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117654.3 ENSMUST00000142736.9 |
||
| CDS-3UTR CCA 90 bp | GAGGTTTACCCTGGGAACACCCACAATGAAACGTGTATCTTCCCTGTTTCTCAGCTTTCTTCTCCTTCTTaGATTTCTTCGCAAATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: EVYPGNTHNETCIFPVSQLSSPS*ISSQMV Trigger: AACCATTTGCGAAGAAATCCAAGAAGGAGAAGAAAG...CTGAGAAACAGGGAAGATACACGTTTCATTGTGGGTGTTCCCAGGGTAAACCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117654.3 ENSMUST00000142736.9 |
||
| CDS-3UTR TCA 90 bp | AGTTCATCTCAGGGAGAGCTAAACAAAAATGATCATATCCCGACTACAAGAAGAGCTTCTGGACAACTCTaGATCAGGTTGTGGATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSSQGELNKNDHIPTTRRASGQL*IRLWMV Trigger: AACCATCCACAACCTGATTCAGAGTTGTCCAGAAGC...TCTTCTTGTAGTCGGGATATGATCATTTTTGTTTAGCTCTCCCTGAGATGAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117654.3 |
||
| CDS-3UTR CCA 90 bp | ATAACCGAAACTGCCAGGATATATTTATTACTGAAAGTACAAGCAACTGAGGTTGGATTTCTTCGCAAATaGTTCCTCGGCCCCAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ITETARIYLLLKVQATEVGFLRK*FLGPSA Trigger: AGCACTGGGGCCGAGGAACCATTTGCGAAGAAATCC...AACCTCAGTTGCTTGTACTTTCAGTAATAAATATATCCTGGCAGTTTCGGTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117654.3 |
||
| CDS-3UTR CCA 90 bp | ATAACCGAAACTGCCAGGATATATTTATTACTGAAAGTACAAGCAACTGAGGTTCAGAGGAGCCGACGATaGTATTCTGGGGGTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: ITETARIYLLLKVQATEVQRSRR*YSGGHL Trigger: AAGATGACCCCCAGAATACCATCGTCGGCTCCTCTG...AACCTCAGTTGCTTGTACTTTCAGTAATAAATATATCCTGGCAGTTTCGGTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117654.3 |
||
| CDS-3UTR CCA 90 bp | CAGACTAAGTGCCTTTATAAAGACTTAAGTTCATCTCAGGGAGAGCTAAACAAAGAATCAGGTTGTGGATaGTTGGATGAGAAAACCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QTKCLYKDLSSSQGELNKESGCG*LDEKTQ Trigger: TTGGGTTTTCTCATCCAACCATCCACAACCTGATTC...TTTGTTTAGCTCTCCCTGAGATGAACTTAAGTCTTTATAAAGGCACTTAGTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117654.3 |
||
| CDS-3UTR GCA 90 bp | ATAACCGAAACTGCCAGGATATATTTATTACTGAAAGTACAAGCAACTGAGGTTGTTTGCTGTTCTCCTTaGCCTTTTCTTTCTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ITETARIYLLLKVQATEVVCCSP*PFLSSP Trigger: AGGAGAAGAAAGAAAAGGGCAAGGAGAACAGCAAAC...AACCTCAGTTGCTTGTACTTTCAGTAATAAATATATCCTGGCAGTTTCGGTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117654.3 |
||
| CDS-3UTR CCA 90 bp | CAGACTAAGTGCCTTTATAAAGACTTAAGTTCATCTCAGGGAGAGCTAAACAAAACAGTTTTGAGCTTCTaGACAACTCTGAATCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: QTKCLYKDLSSSQGELNKTVLSF*TTLNQV Trigger: AACCTGATTCAGAGTTGTCCAGAAGCTCAAAACTGT...TTTGTTTAGCTCTCCCTGAGATGAACTTAAGTCTTTATAAAGGCACTTAGTCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117654.3 |
||
| CDS CCA 90 bp | GCTGCTCTGCGCAGCCGCAGGTACTTCAGCCGGTACTTCTCGTTCTaGCTCTTCCTCGGGAGCCTTTTCATCCTGGCCTTGCTGGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: AALRSRRYFSRYFSF*LFLGSLFILALLDS Trigger: GCTGTCCAGCAAGGCCAGGATGAAAAGGCTCCCGAGGAAGAGCCAGAACGAGAAGTACCGGCTGAAGTACCTGCGGCTGCGCAGAGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117654.3 ENSMUST00000142736.9 |
||
| CDS CCA 90 bp | CACTCACCTCCCCCAGACTGTATACTGTCAGACCCCCTAGTCCGATaGGGAACACAGGCTGTCCTGAAGGATCCAGGGCAATGGGTCGAA | + |
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Preference number: 5 (lower is better) Translates to: HSPPPDCILSDPLVR*GTQAVLKDPGQWVE Trigger: TTCGACCCATTGCCCTGGATCCTTCAGGACAGCCTGTGTTCCCCATCGGACTAGGGGGTCTGACAGTATACAGTCTGGGGGAGGTGAGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000142736.9 |
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| CDS-3UTR CAA 90 bp | ACTCCCTCCCATTATGCCGTCATAGCAAGACAGCAATCTAAGAACCAGGGGGCACTTTTCATCCTGGCCTaGCTGGACAGCGGGGTGCGC | + |
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Preference number: 5 (lower is better) Translates to: TPSHYAVIARQQSKNQGALFILA*LDSGVR Trigger: GCGCACCCCGCTGTCCAGCAAGGCCAGGATGAAAAG...TGCCCCCTGGTTCTTAGATTGCTGTCTTGCTATGACGGCATAATGGGAGGGAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000117654.3 |
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| CDS-3UTR CAA 90 bp | AAACTGAGGCTGTACACCGCCGTCCTTGATCTGACAGGTATACAGACACTTCTGCTTTTCATCCTGGCCTaGCTGGACAGCGGGGTGCGC | + |
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Preference number: 5 (lower is better) Translates to: KLRLYTAVLDLTGIQTLLLFILA*LDSGVR Trigger: GCGCACCCCGCTGTCCAGCAAGGCCAGGATGAAAAG...CAGAAGTGTCTGTATACCTGTCAGATCAAGGACGGCGGTGTACAGCCTCAGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142736.9 |
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| CDS-3UTR CAA 90 bp | ACTCCCTCCCATTATGCCGTCATAGCAAGACAGCAATCTAAGAACCAGGGGGCATGGAAGCCAGGTCGGTaGGTGATGATCTCCCCCAGA | + |
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Preference number: 5 (lower is better) Translates to: TPSHYAVIARQQSKNQGAWKPGR*VMISPR Trigger: TCTGGGGGAGATCATCACCAACCGACCTGGCTTCCA...TGCCCCCTGGTTCTTAGATTGCTGTCTTGCTATGACGGCATAATGGGAGGGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000117654.3 |
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| CDS GCA 90 bp | AATTTCATCACAGATGGAAGCATTTTCAAACACCGTGGCCTTAGCTaGTCTGCGCAGCCGCAGGTACTTCAGCCGGTACTTCTCGTTCTG | + |
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Preference number: 5 (lower is better) Translates to: NFITDGSIFKHRGLS*SAQPQVLQPVLLVL Trigger: CAGAACGAGAAGTACCGGCTGAAGTACCTGCGGCTGCGCAGAGCAGCTAAGGCCACGGTGTTTGAAAATGCTTCCATCTGTGATGAAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117654.3 ENSMUST00000142736.9 |
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| CDS-3UTR CAA 90 bp | GAAAGTGGGTTGGGCATCAGTTTCCCTGTTGTGGCACTGATGGCCCTGAGCAGTAGTTTGCTGTTCTCCTaGCCCTTTTCTTTCTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: ESGLGISFPVVALMALSSSLLFS*PFSFFS Trigger: GGAGAAGAAAGAAAAGGGCAAGGAGAACAGCAAACT...ACTGCTCAGGGCCATCAGTGCCACAACAGGGAAACTGATGCCCAACCCACTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142736.9 |
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| CDS CCA 90 bp | GAAGGAGCAGCGGCCTGTGGCTCCCCTTCAGTTAGAGCATGTATCTaGAGGAGCTTCTTCAGCAAGTATCTTCTTTCTTCCTTTGCTTTA | + |
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Preference number: 5 (lower is better) Translates to: EGAAACGSPSVRACI*RSFFSKYLLSSFAL Trigger: TAAAGCAAAGGAAGAAAGAAGATACTTGCTGAAGAAGCTCCTCCAGATACATGCTCTAACTGAAGGGGAGCCACAGGCCGCTGCTCCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117654.3 ENSMUST00000142736.9 |
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| CDS-3UTR CAA 90 bp | ACCCACAATGAAACGTGTATCTTCCCTGTTTCTCAGATGCTGCCTCCTTCCACAAATCTGAAGACTGAATaGGGCTACACTGGGATGGAG | + |
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Preference number: 5 (lower is better) Translates to: THNETCIFPVSQMLPPSTNLKTE*GYTGME Trigger: CTCCATCCCAGTGTAGCCCAATTCAGTCTTCAGATT...TGTGGAAGGAGGCAGCATCTGAGAAACAGGGAAGATACACGTTTCATTGTGGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117654.3 |
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| CDS-3UTR CAA 90 bp | ACACCCACAATGAAACGTGTATCTTCCCTGTTTCTCAGATGCTGCCTCCTTCCAAGTTTGCTGTTCTCCTaGCCCTTTTCTTTCTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: TPTMKRVSSLFLRCCLLPSLLFS*PFSFFS Trigger: GGAGAAGAAAGAAAAGGGCAAGGAGAACAGCAAACT...TGGAAGGAGGCAGCATCTGAGAAACAGGGAAGATACACGTTTCATTGTGGGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117654.3 ENSMUST00000142736.9 |
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| CDS-3UTR CAA 90 bp | CCAAGAACTCCCTCCCATTATGCCGTCATAGCAAGACAGCAATCTAAGAACCAGTCAGGTTGTGGATGGTaGGATGAGAAAACCCAAAGA | + |
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Preference number: 5 (lower is better) Translates to: PRTPSHYAVIARQQSKNQSGCGW*DEKTQR Trigger: TCTTTGGGTTTTCTCATCCAACCATCCACAACCTGA...CTGGTTCTTAGATTGCTGTCTTGCTATGACGGCATAATGGGAGGGAGTTCTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117654.3 |
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| CDS-3UTR CAA 90 bp | ATAACCGAAACTGCCAGGATATATTTATTACTGAAAGTACAAGCAACTGAGGTTTGCCCCTTCCTGGGTTaGCACGCATCAAATTTCACC | + |
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Preference number: 5 (lower is better) Translates to: ITETARIYLLLKVQATEVCPFLG*HASNFT Trigger: GGTGAAATTTGATGCGTGCAAACCCAGGAAGGGGCA...AACCTCAGTTGCTTGTACTTTCAGTAATAAATATATCCTGGCAGTTTCGGTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117654.3 |
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| CDS CCA 72 bp | TCTCGTTCTGGCTCTTCCTCGGGAGCCTTTTCATCCTaGCCTTGCTGGACAGCGGGGTGCGCGGCTCGGAGG | + |
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Preference number: 6 (lower is better) Translates to: SRSGSSSGAFSS*PCWTAGCAARR Trigger: CCTCCGAGCCGCGCACCCCGCTGTCCAGCAAGGCCAGGATGAAAAGGCTCCCGAGGAAGAGCCAGAACGAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117654.3 ENSMUST00000142736.9 |
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| CDS CCA 72 bp | CGCAGCCGCAGGTACTTCAGCCGGTACTTCTCGTTCTaGCTCTTCCTCGGGAGCCTTTTCATCCTGGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: RSRRYFSRYFSF*LFLGSLFILAL Trigger: CAAGGCCAGGATGAAAAGGCTCCCGAGGAAGAGCCAGAACGAGAAGTACCGGCTGAAGTACCTGCGGCTGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117654.3 ENSMUST00000142736.9 |
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| CDS CCA 72 bp | CCCCCAGACTGTATACTGTCAGACCCCCTAGTCCGATaGGGAACACAGGCTGTCCTGAAGGATCCAGGGCAA | + |
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Preference number: 6 (lower is better) Translates to: PPDCILSDPLVR*GTQAVLKDPGQ Trigger: TTGCCCTGGATCCTTCAGGACAGCCTGTGTTCCCCATCGGACTAGGGGGTCTGACAGTATACAGTCTGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000117654.3 ENSMUST00000142736.9 |
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| CDS GCA 72 bp | ACAGATGGAAGCATTTTCAAACACCGTGGCCTTAGCTaGTCTGCGCAGCCGCAGGTACTTCAGCCGGTACTT | + |
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Preference number: 6 (lower is better) Translates to: TDGSIFKHRGLS*SAQPQVLQPVL Trigger: AAGTACCGGCTGAAGTACCTGCGGCTGCGCAGAGCAGCTAAGGCCACGGTGTTTGAAAATGCTTCCATCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117654.3 ENSMUST00000142736.9 |
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