Pregenerated sensors for TBR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035033Ensembl transcript IDs: ENSMUST00000048934.15, ENSMUST00000102737.5
Found 197 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAAAGGACGCGCTGGGTGGGTGCAGGTTCTAGAGTCAACATCCTATaGTTAAATAGGGAGGCCAAGACAAGGCGGGTCGGAATCGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: ERTRWVGAGSRVNIL*LNREAKTRRVGIAA Trigger: AGCAGCGATTCCGACCCGCCTTGTCTTGGCCTCCCTATTTAACCATAGGATGTTGACTCTAGAACCTGCACCCACCCAGCGCGTCCTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| 3UTR CCA 90 bp | TTAAATAGGGAGGCCAAGACAAGGCGGGTCGGAATCGCTGCTGCCTaGCAGGATTGCCCAGGTCTCCTAAAGTTGAAGAGTTTCATTCCA | + |
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Preference number: 1 (lower is better) Translates to: LNREAKTRRVGIAAA*QDCPGLLKLKSFIP Trigger: TGGAATGAAACTCTTCAACTTTAGGAGACCTGGGCAATCCTGCCAGGCAGCAGCGATTCCGACCCGCCTTGTCTTGGCCTCCCTATTTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| 3UTR GCA 90 bp | GAAAAGTTGGAAAACCACAAGGTTTACAGCCAGGTTCAAGGTCGGTaGGCTAACTGCAGAGAAGGCTGTGTAGAGAGAAAGAAAGAAAGA | + |
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Preference number: 1 (lower is better) Translates to: EKLENHKVYSQVQGR*ANCREGCVERKKER Trigger: TCTTTCTTTCTTTCTCTCTACACAGCCTTCTCTGCAGTTAGCGCACCGACCTTGAACCTGGCTGTAAACCTTGTGGTTTTCCAACTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| 3UTR GCA 90 bp | ACATCATGCAACGAACTGAGAAGTGAGAAAGCCACCACTATGAAGTaGTTCGTGTTTCCAGAGCCTCTTAGAATATCTTTAATAACTCAC | + |
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Preference number: 1 (lower is better) Translates to: TSCNELRSEKATTMK*FVFPEPLRISLITH Trigger: GTGAGTTATTAAAGATATTCTAAGAGGCTCTGGAAACACGAAGCACTTCATAGTGGTGGCTTTCTCACTTCTCAGTTCGTTGCATGATGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| 3UTR-3UTR GCA 90 bp | TACCATCCATCCATCCATCCATCCATCCACTCGGGTATAAGAAAGGACGCGCTGGGTCGGAATCGCTGCTaGCTGGCAGGATTGCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: YHPSIHPSIHSGIRKDALGRNRC*LAGLPR Trigger: CCTGGGCAATCCTGCCAGGCAGCAGCGATTCCGACC...CAGCGCGTCCTTTCTTATACCCGAGTGGATGGATGGATGGATGGATGGATGGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| 3UTR-3UTR GCA 90 bp | CATATTTGGCACCTGCACAGACCAGTAATGGATTTGGCACTTTGGGGAAAAACAGCGGGTCGGAATCGCTaGTGCCTGGCAGGATTGCCC | + |
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Preference number: 2 (lower is better) Translates to: HIWHLHRPVMDLALWGKTAGRNR*CLAGLP Trigger: GGGCAATCCTGCCAGGCAGCAGCGATTCCGACCCGC...TGTTTTTCCCCAAAGTGCCAAATCCATTACTGGTCTGTGCAGGTGCCAAATATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| 3UTR-3UTR GCA 90 bp | AGAGTCAACATCCTATGGTTAAATAGGGAGGCCAAGACAAGGCGGGTCGGAATCGCTGCCTGGCAGGATTaGCCAGGTCTCCTAAAGTTG | + |
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Preference number: 2 (lower is better) Translates to: RVNILWLNREAKTRRVGIAAWQD*PGLLKL Trigger: CAACTTTAGGAGACCTGGGCAATCCTGCCAGGCAGC...GATTCCGACCCGCCTTGTCTTGGCCTCCCTATTTAACCATAGGATGTTGACTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| 3UTR-3UTR CCA 90 bp | CAAGAAAGTCAAATTTCAGCTGTCTCTAAGTGGTGGGGGAATCGTTTTTCAAACGGAATCGCTGCTGCCTaGCAGGATTGCCCAGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: QESQISAVSKWWGNRFSNGIAAA*QDCPGL Trigger: GAGACCTGGGCAATCCTGCCAGGCAGCAGCGATTCC...GTTTGAAAAACGATTCCCCCACCACTTAGAGACAGCTGAAATTTGACTTTCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| 3UTR CAA 90 bp | ACAACTAGCTTTTACAGGTGTTCAGGTGGATTCTCCTTAGCTACATaGTGTGCACCAGGGCACACAGTGGTTACATCATGCAACGAACTG | + |
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Preference number: 2 (lower is better) Translates to: TTSFYRCSGGFSLAT*CAPGHTVVTSCNEL Trigger: CAGTTCGTTGCATGATGTAACCACTGTGTGCCCTGGTGCACACAATGTAGCTAAGGAGAATCCACCTGAACACCTGTAAAAGCTAGTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| 3UTR-3UTR GCA 90 bp | CAAGAAAGTCAAATTTCAGCTGTCTCTAAGTGGTGGGGGAATCGTTTTTCAAACGCCACCACTATGAAGTaGTTCGTGTTTCCAGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: QESQISAVSKWWGNRFSNATTMK*FVFPEP Trigger: AGGCTCTGGAAACACGAAGCACTTCATAGTGGTGGC...GTTTGAAAAACGATTCCCCCACCACTTAGAGACAGCTGAAATTTGACTTTCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| 3UTR-3UTR CCA 90 bp | CATATTTGGCACCTGCACAGACCAGTAATGGATTTGGCACTTTGGGGAAAAACATTACAGGTGTTCAGGTaGATTCTCCTTAGCTACATT | + |
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Preference number: 2 (lower is better) Translates to: HIWHLHRPVMDLALWGKTLQVFR*ILLSYI Trigger: AATGTAGCTAAGGAGAATCCACCTGAACACCTGTAA...TGTTTTTCCCCAAAGTGCCAAATCCATTACTGGTCTGTGCAGGTGCCAAATATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| 3UTR TCA 72 bp | TGCACTTATCCCCGCAGACGGTCATCGAGGGTCAAGTaGAAGAGCGAGTGCGCTAGAACGGGCCTGGGAAGG | + |
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Preference number: 3 (lower is better) Translates to: CTYPRRRSSRVK*KSECARTGLGR Trigger: CCTTCCCAGGCCCGTTCTAGCGCACTCGCTCTTTCACTTGACCCTCGATGACCGTCTGCGGGGATAAGTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| 3UTR CCA 72 bp | GAGGCCAAGACAAGGCGGGTCGGAATCGCTGCTGCCTaGCAGGATTGCCCAGGTCTCCTAAAGTTGAAGAGT | + |
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Preference number: 3 (lower is better) Translates to: EAKTRRVGIAAA*QDCPGLLKLKS Trigger: ACTCTTCAACTTTAGGAGACCTGGGCAATCCTGCCAGGCAGCAGCGATTCCGACCCGCCTTGTCTTGGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| 3UTR CCA 72 bp | CGCTGGGTGGGTGCAGGTTCTAGAGTCAACATCCTATaGTTAAATAGGGAGGCCAAGACAAGGCGGGTCGGA | + |
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Preference number: 3 (lower is better) Translates to: RWVGAGSRVNIL*LNREAKTRRVG Trigger: TCCGACCCGCCTTGTCTTGGCCTCCCTATTTAACCATAGGATGTTGACTCTAGAACCTGCACCCACCCAGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| 3UTR GCA 72 bp | GAAAACCACAAGGTTTACAGCCAGGTTCAAGGTCGGTaGGCTAACTGCAGAGAAGGCTGTGTAGAGAGAAAG | + |
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Preference number: 3 (lower is better) Translates to: ENHKVYSQVQGR*ANCREGCVERK Trigger: CTTTCTCTCTACACAGCCTTCTCTGCAGTTAGCGCACCGACCTTGAACCTGGCTGTAAACCTTGTGGTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| 3UTR GCA 72 bp | CAGGTGTTCAGGTGGATTCTCCTTAGCTACATTGTGTaGACCAGGGCACACAGTGGTTACATCATGCAACGA | + |
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Preference number: 3 (lower is better) Translates to: QVFRWILLSYIV*TRAHSGYIMQR Trigger: TCGTTGCATGATGTAACCACTGTGTGCCCTGGTGCACACAATGTAGCTAAGGAGAATCCACCTGAACACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| 3UTR-3UTR CAA 90 bp | TTACAGGTGTTCAGGTGGATTCTCCTTAGCTACATTGTGTGCACCAGGGCACACCTCACAGACGAAAAGTaGGAAAACCACAAGGTTTAC | + |
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Preference number: 3 (lower is better) Translates to: LQVFRWILLSYIVCTRAHLTDEK*ENHKVY Trigger: GTAAACCTTGTGGTTTTCCAACTTTTCGTCTGTGAG...GTGTGCCCTGGTGCACACAATGTAGCTAAGGAGAATCCACCTGAACACCTGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| 3UTR CCA 72 bp | AAGACAGGGAGGATCATAACCTCACAGACGAAAAGTTaGAAAACCACAAGGTTTACAGCCAGGTTCAAGGTC | + |
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Preference number: 3 (lower is better) Translates to: KTGRIITSQTKS*KTTRFTARFKV Trigger: GACCTTGAACCTGGCTGTAAACCTTGTGGTTTTCCAACTTTTCGTCTGTGAGGTTATGATCCTCCCTGTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| 3UTR GCA 72 bp | AACGAACTGAGAAGTGAGAAAGCCACCACTATGAAGTaGTTCGTGTTTCCAGAGCCTCTTAGAATATCTTTA | + |
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Preference number: 3 (lower is better) Translates to: NELRSEKATTMK*FVFPEPLRISL Trigger: TAAAGATATTCTAAGAGGCTCTGGAAACACGAAGCACTTCATAGTGGTGGCTTTCTCACTTCTCAGTTCGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| 3UTR CCA 72 bp | GGGGGATTAATGCTCCTTATCAAATATAACAAGACTTaGGGGGAATCAGTCTTACTTGCAATAATGCTAGTG | + |
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Preference number: 3 (lower is better) Translates to: GGLMLLIKYNKT*GESVLLAIMLV Trigger: CACTAGCATTATTGCAAGTAAGACTGATTCCCCCCAAGTCTTGTTATATTTGATAAGGAGCATTAATCCCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS-3UTR GCA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGGCAGCGTGGCCGCGTTaGCGGCGAAGTCCGTGGCCG | + |
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Preference number: 4 (lower is better) Translates to: RASALERAWEGGRGAELGAAWPR*RRSPWP Trigger: CGGCCACGGACTTCGCCGGCAACGCGGCCACGCTGC...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS-3UTR CCA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGCGCCCAGATAGGGGTTaGCGCCGGCCATGCGCGCGG | + |
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Preference number: 4 (lower is better) Translates to: RASALERAWEGGRGAELGRPDRG*RRPCAR Trigger: CCGCGCGCATGGCCGGCGCCAACCCCTATCTGGGCG...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS-3UTR GCA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGGTGCAGCCCGCGGCCTaGAAGGGCAGCGCCTTCACG | + |
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Preference number: 4 (lower is better) Translates to: RASALERAWEGGRGAELGVQPAA*KGSAFT Trigger: CGTGAAGGCGCTGCCCTTGCAGGCCGCGGGCTGCAC...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS-3UTR CCA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGAGGGGTAGCCGGCCGTaGGGTAGCCCTGCGGCGAAG | + |
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Preference number: 4 (lower is better) Translates to: RASALERAWEGGRGAELGRGSRP*GSPAAK Trigger: CTTCGCCGCAGGGCTACCCCACGGCCGGCTACCCCT...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS-3UTR CCA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGGGAAAGAGCCGGCCATaGCGTAGCGGGCGCCGGGCA | + |
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Preference number: 4 (lower is better) Translates to: RASALERAWEGGRGAELGGKSRP*RSGRRA Trigger: TGCCCGGCGCCCGCTACGCCATGGCCGGCTCTTTCC...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 71% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS-3UTR CCA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGGCACGGAGCCCGACTTaGCGCCGCAGTACTGCGGGG | + |
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Preference number: 4 (lower is better) Translates to: RASALERAWEGGRGAELGARSPT*RRSTAG Trigger: CCCCGCAGTACTGCGGCGCCAAGTCGGGCTCCGTGC...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS-3UTR GCA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGGCGCCGGGCACGATCTaGGAGCGCGGAGAGTCGTTG | + |
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Preference number: 4 (lower is better) Translates to: RASALERAWEGGRGAELGAPGTI*ERGESL Trigger: CAACGACTCTCCGCGCTCGCAGATCGTGCCCGGCGC...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS-3UTR GCA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGAGCAGCCCGTTGGTGTaGGGCACGCTGCGGTCCGTG | + |
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Preference number: 4 (lower is better) Translates to: RASALERAWEGGRGAELGSSPLV*GTLRSV Trigger: CACGGACCGCAGCGTGCCGCACACCAACGGGCTGCT...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS-3UTR CCA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGGACTGGGGCTGCCGATaGAGAAGGCGGGATGCGCCG | + |
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Preference number: 4 (lower is better) Translates to: RASALERAWEGGRGAELGDWGCR*RRRDAP Trigger: CGGCGCATCCCGCCTTCTCCATCGGCAGCCCCAGTC...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS-3UTR CCA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGGGGACAGCAGCCCGTTaGTGTGCGGCACGCTGCGGT | + |
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Preference number: 4 (lower is better) Translates to: RASALERAWEGGRGAELGGTAAR*CAARCG Trigger: ACCGCAGCGTGCCGCACACCAACGGGCTGCTGTCCC...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 70% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS-3UTR CCA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGTGCCGGCGAAGTCCGTaGCCGTGTCGTAGGCCGAGG | + |
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Preference number: 4 (lower is better) Translates to: RASALERAWEGGRGAELGCRRSP*PCRRPR Trigger: CCTCGGCCTACGACACGGCCACGGACTTCGCCGGCA...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS-3UTR TCA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGCCAGCACCTCGCTCTTaGGCGGGGACGAGCTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: RASALERAWEGGRGAELGPAPRS*AGTSSQ Trigger: CTGAGAGCTCGTCCCCGCTCAAGAGCGAGGTGCTGG...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS-3UTR CCA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGCTCGGCCTGGCTGGCTaGTGTCCTCTGTGCCATCCT | + |
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Preference number: 4 (lower is better) Translates to: RASALERAWEGGRGAELGLGLAG*CPLCHP Trigger: AGGATGGCACAGAGGACACCAGCCAGCCAGGCCGAG...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS-3UTR CCA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGTGGACTCGGCCTGGCTaGCTGGTGTCCTCTGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: RASALERAWEGGRGAELGWTRPG*LVSSVP Trigger: TGGCACAGAGGACACCAGCCAGCCAGGCCGAGTCCA...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS-3UTR CCA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGCGTCTGGACTCGGCCTaGCTGGCTGGTGTCCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: RASALERAWEGGRGAELGRLDSA*LAGVLC Trigger: ACAGAGGACACCAGCCAGCCAGGCCGAGTCCAGACG...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS-3UTR CCA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGCATACGACAGCAGCGTaGCCGCGTTGCCGGCGAAGT | + |
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Preference number: 4 (lower is better) Translates to: RASALERAWEGGRGAELGHTTAA*PRCRRS Trigger: ACTTCGCCGGCAACGCGGCCACGCTGCTGTCGTATG...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS-3UTR CCA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGTTCTCGCAGTCCCGCTaGGCCAGCACCTCGCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: RASALERAWEGGRGAELGFSQSR*ASTSLL Trigger: CAAGAGCGAGGTGCTGGCCCAGCGGGACTGCGAGAA...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS-3UTR CCA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGGCGTCTCGATCCAGCTaGAGTCGGACAGGTCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: RASALERAWEGGRGAELGASRSS*SRTGPW Trigger: CCAAGGACCTGTCCGACTCCAGCTGGATCGAGACGC...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS-3UTR CCA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGAGATCCGCCTCCGCTTaGCCTGCTCGTAAATCCCCG | + |
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Preference number: 4 (lower is better) Translates to: RASALERAWEGGRGAELGRSASA*PARKSP Trigger: CGGGGATTTACGAGCAGGCCAAGCGGAGGCGGATCT...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS-3UTR CCA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGGGAAAAGTGAACGTCTaGACTCGGCCTGGCTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: RASALERAWEGGRGAELGGKVNV*TRPGWL Trigger: CAGCCAGCCAGGCCGAGTCCAGACGTTCACTTTTCC...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS-3UTR CCA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGGGTGGAAGCGGGCCTTaGCGTAGTTGCTCACGAACT | + |
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Preference number: 4 (lower is better) Translates to: RASALERAWEGGRGAELGGGSGP*RSCSRT Trigger: AGTTCGTGAGCAACTACGCCAAGGCCCGCTTCCACC...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS-3UTR TCA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGTGGAGTCGATGGATTTaGTGGAGGAGGGCGTCTCGA | + |
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Preference number: 4 (lower is better) Translates to: RASALERAWEGGRGAELGWSRWI*WRRASR Trigger: TCGAGACGCCCTCCTCCATCAAATCCATCGACTCCA...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS-3UTR GCA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGCGGGGCTGGTACTTGTaGAGGGACTGTAAAACCACC | + |
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Preference number: 4 (lower is better) Translates to: RASALERAWEGGRGAELGRGWYL*RDCKTT Trigger: GGTGGTTTTACAGTCCCTGCACAAGTACCAGCCCCG...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS-3UTR GCA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGTTCACTTCCACCACGTaGAGACGGGGCTGGTACTTG | + |
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Preference number: 4 (lower is better) Translates to: RASALERAWEGGRGAELGFTSTT*RRGWYL Trigger: CAAGTACCAGCCCCGTCTGCACGTGGTGGAAGTGAA...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS-3UTR GCA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGCTCACGAACTGGTCTTaGAGGAAAGAGCCGGCCATG | + |
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Preference number: 4 (lower is better) Translates to: RASALERAWEGGRGAELGLTNWS*RKEPAM Trigger: CATGGCCGGCTCTTTCCTGCAAGACCAGTTCGTGAG...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS-3UTR GCA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGGGGCCTTGGCGTAGTTaGTCACGAACTGGTCTTGCA | + |
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Preference number: 4 (lower is better) Translates to: RASALERAWEGGRGAELGGPWRS*SRTGLA Trigger: TGCAAGACCAGTTCGTGAGCAACTACGCCAAGGCCC...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 64% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS-3UTR CCA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGAGCCGCCTATGTCCTTaGCGCAGTTCTTCTCGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RASALERAWEGGRGAELGSRLCP*RSSSRS Trigger: ACTGCGAGAAGAACTGCGCCAAGGACATAGGCGGCT...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS-3UTR GCA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGGGCTGGTGTCCTCTGTaGCATCCTCATTCACTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RASALERAWEGGRGAELGGWCPL*HPHSLP Trigger: TGGAAGTGAATGAGGATGGCACAGAGGACACCAGCC...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS-3UTR GCA 90 bp | CGGGTCGGAATCGCTGCTGCCTGGCAGGATTGCCCAGGTCTCCTAAAGTTGAAGGCGCCGGGCACGATCTaGGAGCGCGGAGAGTCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RVGIAAAWQDCPGLLKLKAPGTI*ERGESL Trigger: CAACGACTCTCCGCGCTCGCAGATCGTGCCCGGCGC...CTTCAACTTTAGGAGACCTGGGCAATCCTGCCAGGCAGCAGCGATTCCGACCCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS-3UTR GCA 90 bp | CGGGTCGGAATCGCTGCTGCCTGGCAGGATTGCCCAGGTCTCCTAAAGTTGAAGAGCAGCCCGTTGGTGTaGGGCACGCTGCGGTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: RVGIAAAWQDCPGLLKLKSSPLV*GTLRSV Trigger: CACGGACCGCAGCGTGCCGCACACCAACGGGCTGCT...CTTCAACTTTAGGAGACCTGGGCAATCCTGCCAGGCAGCAGCGATTCCGACCCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS-3UTR CCA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGGAGAGTTTACTTCTCTaGACGTCCCCTGGTGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RASALERAWEGGRGAELGESLLL*TSPGES Trigger: GGACTCACCAGGGGACGTCCAGAGAAGTAAACTCTC...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS-3UTR CCA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGAGTGAGCCCCAGTGTTaGGGGAATCCGGATGCATAT | + |
|
Preference number: 4 (lower is better) Translates to: RASALERAWEGGRGAELGSEPQC*GNPDAY Trigger: ATATGCATCCGGATTCCCCCAACACTGGGGCTCACT...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
||
| CDS-3UTR CCA 90 bp | CGGGTCGGAATCGCTGCTGCCTGGCAGGATTGCCCAGGTCTCCTAAAGTTGAAGTGGGGTACGGGAACATaGCACTGGGAGCGGTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RVGIAAAWQDCPGLLKLKWGTGT*HWERWP Trigger: CGGCCACCGCTCCCAGTGCCATGTTCCCGTACCCCA...CTTCAACTTTAGGAGACCTGGGCAATCCTGCCAGGCAGCAGCGATTCCGACCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS-3UTR TCA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGCTGCCCATTGTTGTTTaGTGCTCCCTTGTTGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RASALERAWEGGRGAELGLPIVV*CSLVVG Trigger: ACCAACAACAAGGGAGCATCAAACAACAATGGGCAG...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
||
| CDS-3UTR GCA 90 bp | GAGAGACCTGCACTTATCCCCGCAGACGGTCATCGAGGGTCAAGTGAAAGAGCGATGGAGAAGGCGGGATaGGCCGGTCCGTGCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ERPALIPADGHRGSSERAMEKAG*AGPCWL Trigger: CAGCCAGCACGGACCGGCGCATCCCGCCTTCTCCAT...CGCTCTTTCACTTGACCCTCGATGACCGTCTGCGGGGATAAGTGCAGGTCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS-3UTR CCA 90 bp | CGGGTCGGAATCGCTGCTGCCTGGCAGGATTGCCCAGGTCTCCTAAAGTTGAAGCATACGACAGCAGCGTaGCCGCGTTGCCGGCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RVGIAAAWQDCPGLLKLKHTTAA*PRCRRS Trigger: ACTTCGCCGGCAACGCGGCCACGCTGCTGTCGTATG...CTTCAACTTTAGGAGACCTGGGCAATCCTGCCAGGCAGCAGCGATTCCGACCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS-3UTR GCA 90 bp | TTACAGGTGTTCAGGTGGATTCTCCTTAGCTACATTGTGTGCACCAGGGCACACGCAGCGTGGCCGCGTTaGCGGCGAAGTCCGTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LQVFRWILLSYIVCTRAHAAWPR*RRSPWP Trigger: CGGCCACGGACTTCGCCGGCAACGCGGCCACGCTGC...GTGTGCCCTGGTGCACACAATGTAGCTAAGGAGAATCCACCTGAACACCTGTAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS-3UTR TCA 90 bp | CGGGTCGGAATCGCTGCTGCCTGGCAGGATTGCCCAGGTCTCCTAAAGTTGAAGCTGGACGTCCCCTGGTaGGTCCTTGGAGTCAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RVGIAAAWQDCPGLLKLKLDVPW*VLGVRK Trigger: TTTCCTGACTCCAAGGACTCACCAGGGGACGTCCAG...CTTCAACTTTAGGAGACCTGGGCAATCCTGCCAGGCAGCAGCGATTCCGACCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS-3UTR GCA 90 bp | TTACAGGTGTTCAGGTGGATTCTCCTTAGCTACATTGTGTGCACCAGGGCACACGTGCAGCCCGCGGCCTaGAAGGGCAGCGCCTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: LQVFRWILLSYIVCTRAHVQPAA*KGSAFT Trigger: CGTGAAGGCGCTGCCCTTGCAGGCCGCGGGCTGCAC...GTGTGCCCTGGTGCACACAATGTAGCTAAGGAGAATCCACCTGAACACCTGTAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS-3UTR CCA 90 bp | TACCATCCATCCATCCATCCATCCATCCACTCGGGTATAAGAAAGGACGCGCTGGGGACAGCAGCCCGTTaGTGTGCGGCACGCTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: YHPSIHPSIHSGIRKDALGTAAR*CAARCG Trigger: ACCGCAGCGTGCCGCACACCAACGGGCTGCTGTCCC...CAGCGCGTCCTTTCTTATACCCGAGTGGATGGATGGATGGATGGATGGATGGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS-3UTR TCA 90 bp | GAGAGACCTGCACTTATCCCCGCAGACGGTCATCGAGGGTCAAGTGAAAGAGCGGAGCCATCGAAACTGTaGCGAAGCTCAGAGACCCCG | + |
|
Preference number: 4 (lower is better) Translates to: ERPALIPADGHRGSSERAEPSKL*RSSETP Trigger: CGGGGTCTCTGAGCTTCGTCACAGTTTCGATGGCTC...CGCTCTTTCACTTGACCCTCGATGACCGTCTGCGGGGATAAGTGCAGGTCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS-3UTR GCA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGTGTAAAACCACCATCTaGCCATTGTTGTTTGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: RASALERAWEGGRGAELGCKTTI*PLLFDA Trigger: AGCATCAAACAACAATGGGCAGATGGTGGTTTTACA...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS-3UTR CCA 90 bp | TTACAGGTGTTCAGGTGGATTCTCCTTAGCTACATTGTGTGCACCAGGGCACACTGGCACTGGGAGCGGTaGCCGCAGACTGTGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LQVFRWILLSYIVCTRAHWHWER*PQTVAG Trigger: GCCAGCCACAGTCTGCGGCCACCGCTCCCAGTGCCA...GTGTGCCCTGGTGCACACAATGTAGCTAAGGAGAATCCACCTGAACACCTGTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS-3UTR CCA 90 bp | TACCATCCATCCATCCATCCATCCATCCACTCGGGTATAAGAAAGGACGCGCTGGTGGCCGTACTGCTGTaGGTAGGGGTAGCCGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: YHPSIHPSIHSGIRKDALVAVLL*VGVAGR Trigger: ACGGCCGGCTACCCCTACCCACAGCAGTACGGCCAC...CAGCGCGTCCTTTCTTATACCCGAGTGGATGGATGGATGGATGGATGGATGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS-3UTR GCA 90 bp | ACGAAAAGTTGGAAAACCACAAGGTTTACAGCCAGGTTCAAGGTCGGTGCGCTAGGATGCGCCGGTCCGTaGTGGCTGGGGTACGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TKSWKTTRFTARFKVGALGCAGP*WLGYGN Trigger: GTTCCCGTACCCCAGCCAGCACGGACCGGCGCATCC...TAGCGCACCGACCTTGAACCTGGCTGTAAACCTTGTGGTTTTCCAACTTTTCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS-3UTR GCA 90 bp | GAGAGACCTGCACTTATCCCCGCAGACGGTCATCGAGGGTCAAGTGAAAGAGCGTTGCACAGGTATACTTaGGCCTTGCCGGGCACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: ERPALIPADGHRGSSERALHRYT*ALPGTN Trigger: GTTGGTGCCCGGCAAGGCGCAAGTATACCTGTGCAA...CGCTCTTTCACTTGACCCTCGATGACCGTCTGCGGGGATAAGTGCAGGTCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS-3UTR CCA 90 bp | CGGGTCGGAATCGCTGCTGCCTGGCAGGATTGCCCAGGTCTCCTAAAGTTGAAGAGATCCGCCCGAATGTaGGTAGCTGCTGCTCACATT | + |
|
Preference number: 4 (lower is better) Translates to: RVGIAAAWQDCPGLLKLKRSARM*VAAAHI Trigger: AATGTGAGCAGCAGCTACCCACATTCGGGCGGATCT...CTTCAACTTTAGGAGACCTGGGCAATCCTGCCAGGCAGCAGCGATTCCGACCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS-3UTR CCA 90 bp | AGAGTCAACATCCTATGGTTAAATAGGGAGGCCAAGACAAGGCGGGTCGGAATCTGCGCCGGTCCGTGCTaGCTGGGGTACGGGAACATG | + |
|
Preference number: 4 (lower is better) Translates to: RVNILWLNREAKTRRVGICAGPC*LGYGNM Trigger: CATGTTCCCGTACCCCAGCCAGCACGGACCGGCGCA...GATTCCGACCCGCCTTGTCTTGGCCTCCCTATTTAACCATAGGATGTTGACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS-3UTR CCA 90 bp | GAGAGACCTGCACTTATCCCCGCAGACGGTCATCGAGGGTCAAGTGAAAGAGCGCCTGCGGCGAAGAGTTaGACAGCAGGCTGTTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: ERPALIPADGHRGSSERAPAAKS*TAGCCK Trigger: CTTACAACAGCCTGCTGTCCAACTCTTCGCCGCAGG...CGCTCTTTCACTTGACCCTCGATGACCGTCTGCGGGGATAAGTGCAGGTCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS-3UTR CCA 90 bp | AGAGTCAACATCCTATGGTTAAATAGGGAGGCCAAGACAAGGCGGGTCGGAATCACGGGAACATGGCACTaGGAGCGGTGGCCGCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: RVNILWLNREAKTRRVGITGTWH*ERWPQT Trigger: AGTCTGCGGCCACCGCTCCCAGTGCCATGTTCCCGT...GATTCCGACCCGCCTTGTCTTGGCCTCCCTATTTAACCATAGGATGTTGACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS-3UTR CCA 90 bp | AGAGTCAACATCCTATGGTTAAATAGGGAGGCCAAGACAAGGCGGGTCGGAATCCGTCTGGACTCGGCCTaGCTGGCTGGTGTCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RVNILWLNREAKTRRVGIRLDSA*LAGVLC Trigger: ACAGAGGACACCAGCCAGCCAGGCCGAGTCCAGACG...GATTCCGACCCGCCTTGTCTTGGCCTCCCTATTTAACCATAGGATGTTGACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS-3UTR CCA 90 bp | CATATTTGGCACCTGCACAGACCAGTAATGGATTTGGCACTTTGGGGAAAAACAGCACGGAGCCCGACTTaGCGCCGCAGTACTGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HIWHLHRPVMDLALWGKTARSPT*RRSTAG Trigger: CCCCGCAGTACTGCGGCGCCAAGTCGGGCTCCGTGC...TGTTTTTCCCCAAAGTGCCAAATCCATTACTGGTCTGTGCAGGTGCCAAATATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| 3UTR CAA 72 bp | GACAAGGCGGGTCGGAATCGCTGCTGCCTGGCAGGATaGCCCAGGTCTCCTAAAGTTGAAGAGTTTCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: DKAGRNRCCLAG*PRSPKVEEFHS Trigger: GGAATGAAACTCTTCAACTTTAGGAGACCTGGGCAATCCTGCCAGGCAGCAGCGATTCCGACCCGCCTTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS-3UTR TCA 90 bp | CGGGTCGGAATCGCTGCTGCCTGGCAGGATTGCCCAGGTCTCCTAAAGTTGAAGCTGCCCATTGTTGTTTaGTGCTCCCTTGTTGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RVGIAAAWQDCPGLLKLKLPIVV*CSLVVG Trigger: ACCAACAACAAGGGAGCATCAAACAACAATGGGCAG...CTTCAACTTTAGGAGACCTGGGCAATCCTGCCAGGCAGCAGCGATTCCGACCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS-3UTR TCA 90 bp | GAGAGACCTGCACTTATCCCCGCAGACGGTCATCGAGGGTCAAGTGAAAGAGCGTTGTCTGTATCTGACTaGTTCGTCATCCCCCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: ERPALIPADGHRGSSERALSVSD*FVIPLV Trigger: TACCAGGGGGATGACGAATCAGTCAGATACAGACAA...CGCTCTTTCACTTGACCCTCGATGACCGTCTGCGGGGATAAGTGCAGGTCTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS-3UTR TCA 90 bp | TACCATCCATCCATCCATCCATCCATCCACTCGGGTATAAGAAAGGACGCGCTGTGGAGTCGATGGATTTaGTGGAGGAGGGCGTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: YHPSIHPSIHSGIRKDALWSRWI*WRRASR Trigger: TCGAGACGCCCTCCTCCATCAAATCCATCGACTCCA...CAGCGCGTCCTTTCTTATACCCGAGTGGATGGATGGATGGATGGATGGATGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS-3UTR GCA 90 bp | TACCATCCATCCATCCATCCATCCATCCACTCGGGTATAAGAAAGGACGCGCTGCGGGGCTGGTACTTGTaGAGGGACTGTAAAACCACC | + |
|
Preference number: 4 (lower is better) Translates to: YHPSIHPSIHSGIRKDALRGWYL*RDCKTT Trigger: GGTGGTTTTACAGTCCCTGCACAAGTACCAGCCCCG...CAGCGCGTCCTTTCTTATACCCGAGTGGATGGATGGATGGATGGATGGATGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS-3UTR CCA 90 bp | AGAGTCAACATCCTATGGTTAAATAGGGAGGCCAAGACAAGGCGGGTCGGAATCGGAAAAGTGAACGTCTaGACTCGGCCTGGCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RVNILWLNREAKTRRVGIGKVNV*TRPGWL Trigger: CAGCCAGCCAGGCCGAGTCCAGACGTTCACTTTTCC...GATTCCGACCCGCCTTGTCTTGGCCTCCCTATTTAACCATAGGATGTTGACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS-3UTR CCA 90 bp | TACCATCCATCCATCCATCCATCCATCCACTCGGGTATAAGAAAGGACGCGCTGAGCCGCCTATGTCCTTaGCGCAGTTCTTCTCGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: YHPSIHPSIHSGIRKDALSRLCP*RSSSRS Trigger: ACTGCGAGAAGAACTGCGCCAAGGACATAGGCGGCT...CAGCGCGTCCTTTCTTATACCCGAGTGGATGGATGGATGGATGGATGGATGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS-3UTR TCA 90 bp | GAGAGACCTGCACTTATCCCCGCAGACGGTCATCGAGGGTCAAGTGAAAGAGCGGTCGAGATAATGGGATaGTCATGCAAGACAAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ERPALIPADGHRGSSERAVEIMG*SCKTSS Trigger: TGAGCTTGTCTTGCATGATCATCCCATTATCTCGAC...CGCTCTTTCACTTGACCCTCGATGACCGTCTGCGGGGATAAGTGCAGGTCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS-3UTR GCA 90 bp | TTACAGGTGTTCAGGTGGATTCTCCTTAGCTACATTGTGTGCACCAGGGCACACTTCACTTCCACCACGTaGAGACGGGGCTGGTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: LQVFRWILLSYIVCTRAHFTSTT*RRGWYL Trigger: CAAGTACCAGCCCCGTCTGCACGTGGTGGAAGTGAA...GTGTGCCCTGGTGCACACAATGTAGCTAAGGAGAATCCACCTGAACACCTGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS-3UTR TCA 90 bp | CAAGAAAGTCAAATTTCAGCTGTCTCTAAGTGGTGGGGGAATCGTTTTTCAAACCCAGCACCTCGCTCTTaGGCGGGGACGAGCTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QESQISAVSKWWGNRFSNPAPRS*AGTSSQ Trigger: CTGAGAGCTCGTCCCCGCTCAAGAGCGAGGTGCTGG...GTTTGAAAAACGATTCCCCCACCACTTAGAGACAGCTGAAATTTGACTTTCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS-3UTR GCA 90 bp | ACGAAAAGTTGGAAAACCACAAGGTTTACAGCCAGGTTCAAGGTCGGTGCGCTACTCACGAACTGGTCTTaGAGGAAAGAGCCGGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: TKSWKTTRFTARFKVGALLTNWS*RKEPAM Trigger: CATGGCCGGCTCTTTCCTGCAAGACCAGTTCGTGAG...TAGCGCACCGACCTTGAACCTGGCTGTAAACCTTGTGGTTTTCCAACTTTTCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS-3UTR CCA 90 bp | AGAGTCAACATCCTATGGTTAAATAGGGAGGCCAAGACAAGGCGGGTCGGAATCCAGACTGTGGCTGGCTaGACTGAGAGAGTAGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: RVNILWLNREAKTRRVGIQTVAG*TERVGN Trigger: GTTACCTACTCTCTCAGTCCAGCCAGCCACAGTCTG...GATTCCGACCCGCCTTGTCTTGGCCTCCCTATTTAACCATAGGATGTTGACTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS-3UTR CCA 90 bp | AAGTGCTTCGTGTTTCCAGAGCCTCTTAGAATATCTTTAATAACTCACAAGAAACGCCCAGATAGGGGTTaGCGCCGGCCATGCGCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: KCFVFPEPLRISLITHKKRPDRG*RRPCAR Trigger: CCGCGCGCATGGCCGGCGCCAACCCCTATCTGGGCG...TTTCTTGTGAGTTATTAAAGATATTCTAAGAGGCTCTGGAAACACGAAGCACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS-3UTR CCA 90 bp | ACGAAAAGTTGGAAAACCACAAGGTTTACAGCCAGGTTCAAGGTCGGTGCGCTAAGTGAGCCCCAGTGTTaGGGGAATCCGGATGCATAT | + |
|
Preference number: 4 (lower is better) Translates to: TKSWKTTRFTARFKVGALSEPQC*GNPDAY Trigger: ATATGCATCCGGATTCCCCCAACACTGGGGCTCACT...TAGCGCACCGACCTTGAACCTGGCTGTAAACCTTGTGGTTTTCCAACTTTTCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS-3UTR CCA 90 bp | TGCTTCGTGTTTCCAGAGCCTCTTAGAATATCTTTAATAACTCACAAGAAAACAGGAAAGAGCCGGCCATaGCGTAGCGGGCGCCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CFVFPEPLRISLITHKKTGKSRP*RSGRRA Trigger: TGCCCGGCGCCCGCTACGCCATGGCCGGCTCTTTCC...TGTTTTCTTGTGAGTTATTAAAGATATTCTAAGAGGCTCTGGAAACACGAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS-3UTR CCA 90 bp | CATATTTGGCACCTGCACAGACCAGTAATGGATTTGGCACTTTGGGGAAAAACAGGTGGAAGCGGGCCTTaGCGTAGTTGCTCACGAACT | + |
|
Preference number: 4 (lower is better) Translates to: HIWHLHRPVMDLALWGKTGGSGP*RSCSRT Trigger: AGTTCGTGAGCAACTACGCCAAGGCCCGCTTCCACC...TGTTTTTCCCCAAAGTGCCAAATCCATTACTGGTCTGTGCAGGTGCCAAATATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS-3UTR GCA 90 bp | CATATTTGGCACCTGCACAGACCAGTAATGGATTTGGCACTTTGGGGAAAAACAGGGCCTTGGCGTAGTTaGTCACGAACTGGTCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: HIWHLHRPVMDLALWGKTGPWRS*SRTGLA Trigger: TGCAAGACCAGTTCGTGAGCAACTACGCCAAGGCCC...TGTTTTTCCCCAAAGTGCCAAATCCATTACTGGTCTGTGCAGGTGCCAAATATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS-3UTR CCA 90 bp | ACGAAAAGTTGGAAAACCACAAGGTTTACAGCCAGGTTCAAGGTCGGTGCGCTAGGTTTCCTTGCACATTaGTGTCCGCTTTGCCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: TKSWKTTRFTARFKVGALGFLAH*CPLCHK Trigger: CTTGTGGCAAAGCGGACACCAATGTGCAAGGAAACC...TAGCGCACCGACCTTGAACCTGGCTGTAAACCTTGTGGTTTTCCAACTTTTCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS-3UTR CCA 90 bp | ATACAAACGAGCAGAAAACAAAACGATTCTCAGTGGAGTGTGTACTTGTATAAATGCCGGCGAAGTCCGTaGCCGTGTCGTAGGCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IQTSRKQNDSQWSVYLYKCRRSP*PCRRPR Trigger: CCTCGGCCTACGACACGGCCACGGACTTCGCCGGCA...TTTATACAAGTACACACTCCACTGAGAATCGTTTTGTTTTCTGCTCGTTTGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS-3UTR TCA 90 bp | TTACAGGTGTTCAGGTGGATTCTCCTTAGCTACATTGTGTGCACCAGGGCACACAGCTGCTGCTCACATTaGGAAATTTCTTGGAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LQVFRWILLSYIVCTRAHSCCSH*EISWRA Trigger: TGCTCTCCAAGAAATTTCTCAATGTGAGCAGCAGCT...GTGTGCCCTGGTGCACACAATGTAGCTAAGGAGAATCCACCTGAACACCTGTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS-3UTR CCA 90 bp | ATACAAACGAGCAGAAAACAAAACGATTCTCAGTGGAGTGTGTACTTGTATAAACCGGTCCGTGCTGGCTaGGGTACGGGAACATGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: IQTSRKQNDSQWSVYLYKPVRAG*GTGTWH Trigger: GTGCCATGTTCCCGTACCCCAGCCAGCACGGACCGG...TTTATACAAGTACACACTCCACTGAGAATCGTTTTGTTTTCTGCTCGTTTGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS-3UTR CCA 90 bp | TACCATCCATCCATCCATCCATCCATCCACTCGGGTATAAGAAAGGACGCGCTGTATTGTAATGAGCGGTaGGATCGAGACCAGAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: YHPSIHPSIHSGIRKDALYCNER*DRDQKC Trigger: ACATTTCTGGTCTCGATCCCACCGCTCATTACAATA...CAGCGCGTCCTTTCTTATACCCGAGTGGATGGATGGATGGATGGATGGATGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS-3UTR CCA 90 bp | TTACAGGTGTTCAGGTGGATTCTCCTTAGCTACATTGTGTGCACCAGGGCACACGAAACCTCCAGTGATTaGGATCCGCCAAAATCACAT | + |
|
Preference number: 4 (lower is better) Translates to: LQVFRWILLSYIVCTRAHETSSD*DPPKSH Trigger: ATGTGATTTTGGCGGATCCCAATCACTGGAGGTTTC...GTGTGCCCTGGTGCACACAATGTAGCTAAGGAGAATCCACCTGAACACCTGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS-3UTR CCA 90 bp | ATACAAACGAGCAGAAAACAAAACGATTCTCAGTGGAGTGTGTACTTGTATAAAGGGCCATGTAGCGACTaGGGCTGCCGATGGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: IQTSRKQNDSQWSVYLYKGPCSD*GCRWRR Trigger: CCTTCTCCATCGGCAGCCCCAGTCGCTACATGGCCC...TTTATACAAGTACACACTCCACTGAGAATCGTTTTGTTTTCTGCTCGTTTGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS-3UTR CCA 90 bp | AAGTGCTTCGTGTTTCCAGAGCCTCTTAGAATATCTTTAATAACTCACAAGAAACTCGGCCTGGCTGGCTaGTGTCCTCTGTGCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: KCFVFPEPLRISLITHKKLGLAG*CPLCHP Trigger: AGGATGGCACAGAGGACACCAGCCAGCCAGGCCGAG...TTTCTTGTGAGTTATTAAAGATATTCTAAGAGGCTCTGGAAACACGAAGCACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| 3UTR CAA 72 bp | TTTTACAGGTGTTCAGGTGGATTCTCCTTAGCTACATaGTGTGCACCAGGGCACACAGTGGTTACATCATGC | + |
|
Preference number: 4 (lower is better) Translates to: FYRCSGGFSLAT*CAPGHTVVTSC Trigger: GCATGATGTAACCACTGTGTGCCCTGGTGCACACAATGTAGCTAAGGAGAATCCACCTGAACACCTGTAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS-3UTR GCA 90 bp | AAGTGCTTCGTGTTTCCAGAGCCTCTTAGAATATCTTTAATAACTCACAAGAAATGTAGCGACTGGGGCTaGCGATGGAGAAGGCGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KCFVFPEPLRISLITHKKCSDWG*RWRRRD Trigger: ATCCCGCCTTCTCCATCGGCAGCCCCAGTCGCTACA...TTTCTTGTGAGTTATTAAAGATATTCTAAGAGGCTCTGGAAACACGAAGCACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS-3UTR GCA 90 bp | CATATTTGGCACCTGCACAGACCAGTAATGGATTTGGCACTTTGGGGAAAAACACACAAGGAACCCATTTaGCTCCTTGAAACCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: HIWHLHRPVMDLALWGKTHKEPI*LLETSS Trigger: ACTGGAGGTTTCAAGGAGGCAAATGGGTTCCTTGTG...TGTTTTTCCCCAAAGTGCCAAATCCATTACTGGTCTGTGCAGGTGCCAAATATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS-3UTR CCA 90 bp | ATACAAACGAGCAGAAAACAAAACGATTCTCAGTGGAGTGTGTACTTGTATAAAGCGTCTCGATCCAGCTaGAGTCGGACAGGTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: IQTSRKQNDSQWSVYLYKASRSS*SRTGPW Trigger: CCAAGGACCTGTCCGACTCCAGCTGGATCGAGACGC...TTTATACAAGTACACACTCCACTGAGAATCGTTTTGTTTTCTGCTCGTTTGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS-3UTR TCA 90 bp | CATATTTGGCACCTGCACAGACCAGTAATGGATTTGGCACTTTGGGGAAAAACAAAAATTGTCTGTATCTaGCTGATTCGTCATCCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: HIWHLHRPVMDLALWGKTKIVCI*LIRHPP Trigger: AGGGGGATGACGAATCAGTCAGATACAGACAATTTT...TGTTTTTCCCCAAAGTGCCAAATCCATTACTGGTCTGTGCAGGTGCCAAATATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS-3UTR GCA 90 bp | ATACAAACGAGCAGAAAACAAAACGATTCTCAGTGGAGTGTGTACTTGTATAAAGGCTGGTGTCCTCTGTaGCATCCTCATTCACTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IQTSRKQNDSQWSVYLYKGWCPL*HPHSLP Trigger: TGGAAGTGAATGAGGATGGCACAGAGGACACCAGCC...TTTATACAAGTACACACTCCACTGAGAATCGTTTTGTTTTCTGCTCGTTTGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS-3UTR GCA 90 bp | TGCTTCGTGTTTCCAGAGCCTCTTAGAATATCTTTAATAACTCACAAGAAAACACATTGGTGTCCGCTTTaGCACAAGGAACCCATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CFVFPEPLRISLITHKKTHWCPL*HKEPIC Trigger: GCAAATGGGTTCCTTGTGGCAAAGCGGACACCAATG...TGTTTTCTTGTGAGTTATTAAAGATATTCTAAGAGGCTCTGGAAACACGAAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS-3UTR CCA 90 bp | TGCTTCGTGTTTCCAGAGCCTCTTAGAATATCTTTAATAACTCACAAGAAAACACCCCTGGTGAGTCCTTaGAGTCAGGAAAATTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CFVFPEPLRISLITHKKTPLVSP*SQENCL Trigger: CAGACAATTTTCCTGACTCCAAGGACTCACCAGGGG...TGTTTTCTTGTGAGTTATTAAAGATATTCTAAGAGGCTCTGGAAACACGAAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS-3UTR GCA 90 bp | ATACAAACGAGCAGAAAACAAAACGATTCTCAGTGGAGTGTGTACTTGTATAAATGTAAAACCACCATCTaGCCATTGTTGTTTGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: IQTSRKQNDSQWSVYLYKCKTTI*PLLFDA Trigger: AGCATCAAACAACAATGGGCAGATGGTGGTTTTACA...TTTATACAAGTACACACTCCACTGAGAATCGTTTTGTTTTCTGCTCGTTTGTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS GCA 90 bp | ACGAACCAGCGCTGCGGCGACGGCGCGCCCGGGTCCTCGGCCTGCTaGGGGGACAGCAGCCCGTTGGTGTGCGGCACGCTGCGGTCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: TNQRCGDGAPGSSAC*GDSSPLVCGTLRSV Trigger: CACGGACCGCAGCGTGCCGCACACCAACGGGCTGCTGTCCCCGCAGCAGGCCGAGGACCCGGGCGCGCCGTCGCCGCAGCGCTGGTTCGT 77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS CCA 90 bp | GATAGGGGTTGGCGCCGGCCATGCGCGCGGCGGCCGCGGCGCTGTTaGGCCAGCAGGGGAGCACGGAGCCCGACTTGGCGCCGCAGTACT | + |
|
Preference number: 5 (lower is better) Translates to: DRGWRRPCARRPRRC*ASRGARSPTWRRST Trigger: AGTACTGCGGCGCCAAGTCGGGCTCCGTGCTCCCCTGCTGGCCCAACAGCGCCGCGGCCGCCGCGCGCATGGCCGGCGCCAACCCCTATC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS TCA 90 bp | TGTCGTAGGCCGAGGCCGCGAAGTCCAGCCGGTTGTTGGCCGGCGTaGCGAACCAGCGCTGCGGCGACGGCGCGCCCGGGTCCTCGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: CRRPRPRSPAGCWPA*RTSAAATARPGPRP Trigger: AGGCCGAGGACCCGGGCGCGCCGTCGCCGCAGCGCTGGTTCGTCACGCCGGCCAACAACCGGCTGGACTTCGCGGCCTCGGCCTACGACA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS GCA 90 bp | GCGCCTTCACGCCCGCGGCCGCATACGACAGCAGCGTGGCCGCGTTaGCGGCGAAGTCCGTGGCCGTGTCGTAGGCCGAGGCCGCGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: APSRPRPHTTAAWPR*RRSPWPCRRPRPRS Trigger: ACTTCGCGGCCTCGGCCTACGACACGGCCACGGACTTCGCCGGCAACGCGGCCACGCTGCTGTCGTATGCGGCCGCGGGCGTGAAGGCGC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS CCA 90 bp | GCAAGGGCAGCGCCTTCACGCCCGCGGCCGCATACGACAGCAGCGTaGCCGCGTTGCCGGCGAAGTCCGTGGCCGTGTCGTAGGCCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ARAAPSRPRPHTTAA*PRCRRSPWPCRRPR Trigger: CCTCGGCCTACGACACGGCCACGGACTTCGCCGGCAACGCGGCCACGCTGCTGTCGTATGCGGCCGCGGGCGTGAAGGCGCTGCCCTTGC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS-3UTR CAA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGGGGGACAGCAGCCCGTaGGTGTGCGGCACGCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RASALERAWEGGRGAELGGDSSP*VCGTLR Trigger: CCGCAGCGTGCCGCACACCAACGGGCTGCTGTCCCC...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 72% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS-3UTR CAA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGAGCAGCGTGGCCGCGTaGCCGGCGAAGTCCGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RASALERAWEGGRGAELGSSVAA*PAKSVA Trigger: GGCCACGGACTTCGCCGGCAACGCGGCCACGCTGCT...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS CCA 90 bp | CGACTGGGGCTGCCGATGGAGAAGGCGGGATGCGCCGGTCCGTGCTaGCTGGGGTACGGGAACATGGCACTGGGAGCGGTGGCCGCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: RLGLPMEKAGCAGPC*LGYGNMALGAVAAD Trigger: GTCTGCGGCCACCGCTCCCAGTGCCATGTTCCCGTACCCCAGCCAGCACGGACCGGCGCATCCCGCCTTCTCCATCGGCAGCCCCAGTCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS CCA 90 bp | CGGCCGCATACGACAGCAGCGTGGCCGCGTTGCCGGCGAAGTCCGTaGCCGTGTCGTAGGCCGAGGCCGCGAAGTCCAGCCGGTTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: RPHTTAAWPRCRRSP*PCRRPRPRSPAGCW Trigger: CCAACAACCGGCTGGACTTCGCGGCCTCGGCCTACGACACGGCCACGGACTTCGCCGGCAACGCGGCCACGCTGCTGTCGTATGCGGCCG 71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS-3UTR CAA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGAGCACGGAGCCCGACTaGGCGCCGCAGTACTGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: RASALERAWEGGRGAELGSTEPD*APQYCG Trigger: CCCGCAGTACTGCGGCGCCAAGTCGGGCTCCGTGCT...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS CCA 90 bp | TGGGGCTGCCGATGGAGAAGGCGGGATGCGCCGGTCCGTGCTGGCTaGGGTACGGGAACATGGCACTGGGAGCGGTGGCCGCAGACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: WGCRWRRRDAPVRAG*GTGTWHWERWPQTV Trigger: CACAGTCTGCGGCCACCGCTCCCAGTGCCATGTTCCCGTACCCCAGCCAGCACGGACCGGCGCATCCCGCCTTCTCCATCGGCAGCCCCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS CCA 90 bp | TGGCGTAGCGGGCGCCGGGCACGATCTGCGAGCGCGGAGAGTCGTTaGGCGACGGGGTCAAGCGGTCCATGTCGCAGCCCGTGTAGATCG | + |
|
Preference number: 5 (lower is better) Translates to: WRSGRRARSASAESR*ATGSSGPCRSPCRS Trigger: CGATCTACACGGGCTGCGACATGGACCGCTTGACCCCGTCGCCCAACGACTCTCCGCGCTCGCAGATCGTGCCCGGCGCCCGCTACGCCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS CCA 90 bp | AGAAGGCGGGATGCGCCGGTCCGTGCTGGCTGGGGTACGGGAACATaGCACTGGGAGCGGTGGCCGCAGACTGTGGCTGGCTGGACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RRRDAPVRAGWGTGT*HWERWPQTVAGWTE Trigger: CTCAGTCCAGCCAGCCACAGTCTGCGGCCACCGCTCCCAGTGCCATGTTCCCGTACCCCAGCCAGCACGGACCGGCGCATCCCGCCTTCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS-3UTR CAA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGGCGAAGTCCAGCCGGTaGTTGGCCGGCGTGACGAAC | + |
|
Preference number: 5 (lower is better) Translates to: RASALERAWEGGRGAELGAKSSR*LAGVTN Trigger: GTTCGTCACGCCGGCCAACAACCGGCTGGACTTCGC...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS-3UTR CAA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGGCCAGCACCTCGCTCTaGAGCGGGGACGAGCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RASALERAWEGGRGAELGASTSL*SGDELS Trigger: TGAGAGCTCGTCCCCGCTCAAGAGCGAGGTGCTGGC...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS TCA 90 bp | TGGCGCAGTTCTTCTCGCAGTCCCGCTGGGCCAGCACCTCGCTCTTaGGCGGGGACGAGCTCTCAGACACCGGCGTGTCAGCCGGCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: WRSSSRSPAGPAPRS*AGTSSQTPACQPAR Trigger: TCTCGCCGGCTGACACGCCGGTGTCTGAGAGCTCGTCCCCGCTCAAGAGCGAGGTGCTGGCCCAGCGGGACTGCGAGAAGAACTGCGCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS-3UTR CAA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGAAGTCCAGCCGGTTGTaGGCCGGCGTGACGAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: RASALERAWEGGRGAELGKSSRL*AGVTNQ Trigger: CTGGTTCGTCACGCCGGCCAACAACCGGCTGGACTT...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS CCA 90 bp | TGGCGTAGTTGCTCACGAACTGGTCTTGCAGGAAAGAGCCGGCCATaGCGTAGCGGGCGCCGGGCACGATCTGCGAGCGCGGAGAGTCGT | + |
|
Preference number: 5 (lower is better) Translates to: WRSCSRTGLAGKSRP*RSGRRARSASAESR Trigger: ACGACTCTCCGCGCTCGCAGATCGTGCCCGGCGCCCGCTACGCCATGGCCGGCTCTTTCCTGCAAGACCAGTTCGTGAGCAACTACGCCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS-3UTR CAA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGGCTCACGAACTGGTCTaGCAGGAAAGAGCCGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: RASALERAWEGGRGAELGAHELV*QERAGH Trigger: ATGGCCGGCTCTTTCCTGCAAGACCAGTTCGTGAGC...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS-3UTR CAA 90 bp | CGGGTCGGAATCGCTGCTGCCTGGCAGGATTGCCCAGGTCTCCTAAAGTTGAAGAGCAGCGTGGCCGCGTaGCCGGCGAAGTCCGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RVGIAAAWQDCPGLLKLKSSVAA*PAKSVA Trigger: GGCCACGGACTTCGCCGGCAACGCGGCCACGCTGCT...CTTCAACTTTAGGAGACCTGGGCAATCCTGCCAGGCAGCAGCGATTCCGACCCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS-3UTR CAA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGCTGGAGTCGATGGATTaGATGGAGGAGGGCGTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: RASALERAWEGGRGAELGLESMD*MEEGVS Trigger: CGAGACGCCCTCCTCCATCAAATCCATCGACTCCAG...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS CCA 90 bp | CTTGGTAGGAGTGGCCGTACTGCTGTGGGTAGGGGTAGCCGGCCGTaGGGTAGCCCTGCGGCGAAGAGTTGGACAGCAGGCTGTTGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: LGRSGRTAVGRGSRP*GSPAAKSWTAGCCK Trigger: CTTACAACAGCCTGCTGTCCAACTCTTCGCCGCAGGGCTACCCCACGGCCGGCTACCCCTACCCACAGCAGTACGGCCACTCCTACCAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS-3UTR CAA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGCGGTTTCCTTGCACATaGGTGTCCGCTTTGCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: RASALERAWEGGRGAELGRFPCT*VSALPQ Trigger: TTGTGGCAAAGCGGACACCAATGTGCAAGGAAACCG...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS-3UTR CAA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGTCCAAAAGAGATTTCTaGCCGCATCCAGTGAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: RASALERAWEGGRGAELGSKRDF*PHPVSP Trigger: GGGGCTCACTGGATGCGGCAAGAAATCTCTTTTGGA...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
||
| CDS-3UTR CAA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGACCACCATCTGCCCATaGTTGTTTGATGCTCCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RASALERAWEGGRGAELGTTICP*LFDAPL Trigger: CAAGGGAGCATCAAACAACAATGGGCAGATGGTGGT...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
||
| CDS-3UTR CAA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGGAACTTCTCTCCAGGTaGTCAGTGGTCGAGATAATG | + |
|
Preference number: 5 (lower is better) Translates to: RASALERAWEGGRGAELGELLSR*SVVEIM Trigger: CATTATCTCGACCACTGACAACCTGGAGAGAAGTTC...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS-3UTR CAA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGTCTGCCCATTGTTGTTaGATGCTCCCTTGTTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: RASALERAWEGGRGAELGSAHCC*MLPCCW Trigger: CCAACAACAAGGGAGCATCAAACAACAATGGGCAGA...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
||
| CDS-3UTR CAA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGACCATCTGCCCATTGTaGTTTGATGCTCCCTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RASALERAWEGGRGAELGTICPL*FDAPLL Trigger: CAACAAGGGAGCATCAAACAACAATGGGCAGATGGT...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
||
| CDS TCA 90 bp | GCTTGGCCTGCTCGTAAATCCCCGAGTCGCTGGAGTCGATGGATTTaGTGGAGGAGGGCGTCTCGATCCAGCTGGAGTCGGACAGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: AWPARKSPSRWSRWI*WRRASRSSWSRTGP Trigger: AGGACCTGTCCGACTCCAGCTGGATCGAGACGCCCTCCTCCATCAAATCCATCGACTCCAGCGACTCGGGGATTTACGAGCAGGCCAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
||
| CDS CCA 90 bp | ACGGGAACATGGCACTGGGAGCGGTGGCCGCAGACTGTGGCTGGCTaGACTGAGAGAGTAGGTAACGATCTGCAGCAGAGCCATCGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: TGTWHWERWPQTVAG*TERVGNDLQQSHRN Trigger: GTTTCGATGGCTCTGCTGCAGATCGTTACCTACTCTCTCAGTCCAGCCAGCCACAGTCTGCGGCCACCGCTCCCAGTGCCATGTTCCCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS-3UTR CAA 90 bp | GAGAGACCTGCACTTATCCCCGCAGACGGTCATCGAGGGTCAAGTGAAAGAGCGAAGTCCAGCCGGTTGTaGGCCGGCGTGACGAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: ERPALIPADGHRGSSERAKSSRL*AGVTNQ Trigger: CTGGTTCGTCACGCCGGCCAACAACCGGCTGGACTT...CGCTCTTTCACTTGACCCTCGATGACCGTCTGCGGGGATAAGTGCAGGTCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS GCA 90 bp | TCATCTCCGTTTGATGCCGATGAAATTTCAGCCAAAGTGGCCTGTTaGACAGGTATACTTGCGCCTTGCCGGGCACCAACCCGGGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SSPFDADEISAKVAC*TGILAPCRAPTRAG Trigger: CCCAGCCCGGGTTGGTGCCCGGCAAGGCGCAAGTATACCTGTGCAACAGGCCACTTTGGCTGAAATTTCATCGGCATCAAACGGAGATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS-3UTR CAA 90 bp | AGAGCGAGTGCGCTAGAACGGGCCTGGGAAGGAGGACGTGGGGCCGAGCTGGGGGATGCTCCCTTGTTGTaGGTAAGTTTTAATTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RASALERAWEGGRGAELGDAPLL*VSFNFP Trigger: TGGAAAATTAAAACTTACCAACAACAAGGGAGCATC...CCCCAGCTCGGCCCCACGTCCTCCTTCCCAGGCCCGTTCTAGCGCACTCGCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
||
| CDS-3UTR CAA 90 bp | TTACAGGTGTTCAGGTGGATTCTCCTTAGCTACATTGTGTGCACCAGGGCACACGCCAGCACCTCGCTCTaGAGCGGGGACGAGCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LQVFRWILLSYIVCTRAHASTSL*SGDELS Trigger: TGAGAGCTCGTCCCCGCTCAAGAGCGAGGTGCTGGC...GTGTGCCCTGGTGCACACAATGTAGCTAAGGAGAATCCACCTGAACACCTGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS-3UTR CAA 90 bp | TACCATCCATCCATCCATCCATCCATCCACTCGGGTATAAGAAAGGACGCGCTGGTTGCACAGGTATACTaGCGCCTTGCCGGGCACCAA | + |
|
Preference number: 5 (lower is better) Translates to: YHPSIHPSIHSGIRKDALVAQVY*RLAGHQ Trigger: TTGGTGCCCGGCAAGGCGCAAGTATACCTGTGCAAC...CAGCGCGTCCTTTCTTATACCCGAGTGGATGGATGGATGGATGGATGGATGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS-3UTR CAA 90 bp | GAGAGACCTGCACTTATCCCCGCAGACGGTCATCGAGGGTCAAGTGAAAGAGCGACATTGGTGTCCGCTTaGCCACAAGGAACCCATTTG | + |
|
Preference number: 5 (lower is better) Translates to: ERPALIPADGHRGSSERATLVSA*PQGTHL Trigger: CAAATGGGTTCCTTGTGGCAAAGCGGACACCAATGT...CGCTCTTTCACTTGACCCTCGATGACCGTCTGCGGGGATAAGTGCAGGTCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS-3UTR CAA 90 bp | CATATTTGGCACCTGCACAGACCAGTAATGGATTTGGCACTTTGGGGAAAAACAGCGAAGTCCAGCCGGTaGTTGGCCGGCGTGACGAAC | + |
|
Preference number: 5 (lower is better) Translates to: HIWHLHRPVMDLALWGKTAKSSR*LAGVTN Trigger: GTTCGTCACGCCGGCCAACAACCGGCTGGACTTCGC...TGTTTTTCCCCAAAGTGCCAAATCCATTACTGGTCTGTGCAGGTGCCAAATATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS-3UTR CAA 90 bp | ACGAAAAGTTGGAAAACCACAAGGTTTACAGCCAGGTTCAAGGTCGGTGCGCTACTGGAGTCGATGGATTaGATGGAGGAGGGCGTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: TKSWKTTRFTARFKVGALLESMD*MEEGVS Trigger: CGAGACGCCCTCCTCCATCAAATCCATCGACTCCAG...TAGCGCACCGACCTTGAACCTGGCTGTAAACCTTGTGGTTTTCCAACTTTTCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS-3UTR CAA 90 bp | TGCTTCGTGTTTCCAGAGCCTCTTAGAATATCTTTAATAACTCACAAGAAAACAGGGGACAGCAGCCCGTaGGTGTGCGGCACGCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: CFVFPEPLRISLITHKKTGDSSP*VCGTLR Trigger: CCGCAGCGTGCCGCACACCAACGGGCTGCTGTCCCC...TGTTTTCTTGTGAGTTATTAAAGATATTCTAAGAGGCTCTGGAAACACGAAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS CCA 90 bp | AGACAGGAGAGAGTTTACTTCTCTGGACGTCCCCTGGTGAGTCCTTaGAGTCAGGAAAATTGTCTGTATCTGACTGATTCGTCATCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: RQERVYFSGRPLVSP*SQENCLYLTDSSSP Trigger: GGGGGATGACGAATCAGTCAGATACAGACAATTTTCCTGACTCCAAGGACTCACCAGGGGACGTCCAGAGAAGTAAACTCTCTCCTGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS-3UTR CAA 90 bp | AGAGTCAACATCCTATGGTTAAATAGGGAGGCCAAGACAAGGCGGGTCGGAATCAACCCATTTGCCTCCTaGAAACCTCCAGTGATTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RVNILWLNREAKTRRVGINPFAS*KPPVIG Trigger: CCCAATCACTGGAGGTTTCAAGGAGGCAAATGGGTT...GATTCCGACCCGCCTTGTCTTGGCCTCCCTATTTAACCATAGGATGTTGACTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS-3UTR CAA 90 bp | AGAGTCAACATCCTATGGTTAAATAGGGAGGCCAAGACAAGGCGGGTCGGAATCATAGACCCGGTTTCCTaGCACATTGGTGTCCGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: RVNILWLNREAKTRRVGIIDPVS*HIGVRF Trigger: AAAGCGGACACCAATGTGCAAGGAAACCGGGTCTAT...GATTCCGACCCGCCTTGTCTTGGCCTCCCTATTTAACCATAGGATGTTGACTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS-3UTR CAA 90 bp | AGAGTCAACATCCTATGGTTAAATAGGGAGGCCAAGACAAGGCGGGTCGGAATCACCACCATCTGCCCATaGTTGTTTGATGCTCCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RVNILWLNREAKTRRVGITTICP*LFDAPL Trigger: CAAGGGAGCATCAAACAACAATGGGCAGATGGTGGT...GATTCCGACCCGCCTTGTCTTGGCCTCCCTATTTAACCATAGGATGTTGACTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS-3UTR CAA 90 bp | CATATTTGGCACCTGCACAGACCAGTAATGGATTTGGCACTTTGGGGAAAAACAGCTCACGAACTGGTCTaGCAGGAAAGAGCCGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: HIWHLHRPVMDLALWGKTAHELV*QERAGH Trigger: ATGGCCGGCTCTTTCCTGCAAGACCAGTTCGTGAGC...TGTTTTTCCCCAAAGTGCCAAATCCATTACTGGTCTGTGCAGGTGCCAAATATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS-3UTR CAA 90 bp | AAGTGCTTCGTGTTTCCAGAGCCTCTTAGAATATCTTTAATAACTCACAAGAAAAGCACGGAGCCCGACTaGGCGCCGCAGTACTGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: KCFVFPEPLRISLITHKKSTEPD*APQYCG Trigger: CCCGCAGTACTGCGGCGCCAAGTCGGGCTCCGTGCT...TTTCTTGTGAGTTATTAAAGATATTCTAAGAGGCTCTGGAAACACGAAGCACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS-3UTR CAA 90 bp | ACGAAAAGTTGGAAAACCACAAGGTTTACAGCCAGGTTCAAGGTCGGTGCGCTATCCCCTGGTGAGTCCTaGGAGTCAGGAAAATTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: TKSWKTTRFTARFKVGALSPGES*ESGKLS Trigger: AGACAATTTTCCTGACTCCAAGGACTCACCAGGGGA...TAGCGCACCGACCTTGAACCTGGCTGTAAACCTTGTGGTTTTCCAACTTTTCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS-3UTR CAA 90 bp | AGAGTCAACATCCTATGGTTAAATAGGGAGGCCAAGACAAGGCGGGTCGGAATCTCTGCCCATTGTTGTTaGATGCTCCCTTGTTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: RVNILWLNREAKTRRVGISAHCC*MLPCCW Trigger: CCAACAACAAGGGAGCATCAAACAACAATGGGCAGA...GATTCCGACCCGCCTTGTCTTGGCCTCCCTATTTAACCATAGGATGTTGACTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS-3UTR CAA 90 bp | TTACAGGTGTTCAGGTGGATTCTCCTTAGCTACATTGTGTGCACCAGGGCACACACCATCTGCCCATTGTaGTTTGATGCTCCCTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LQVFRWILLSYIVCTRAHTICPL*FDAPLL Trigger: CAACAAGGGAGCATCAAACAACAATGGGCAGATGGT...GTGTGCCCTGGTGCACACAATGTAGCTAAGGAGAATCCACCTGAACACCTGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS CCA 90 bp | GATAATGGGATGATCATGCAAGACAAGCTCAGATCCGCCCGAATGTaGGTAGCTGCTGCTCACATTGAGAAATTTCTTGGAGAGCATGAT | + |
|
Preference number: 5 (lower is better) Translates to: DNGMIMQDKLRSARM*VAAAHIEKFLGEHD Trigger: ATCATGCTCTCCAAGAAATTTCTCAATGTGAGCAGCAGCTACCCACATTCGGGCGGATCTGAGCTTGTCTTGCATGATCATCCCATTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS-3UTR CAA 90 bp | AGAGTCAACATCCTATGGTTAAATAGGGAGGCCAAGACAAGGCGGGTCGGAATCGATGCTCCCTTGTTGTaGGTAAGTTTTAATTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RVNILWLNREAKTRRVGIDAPLL*VSFNFP Trigger: TGGAAAATTAAAACTTACCAACAACAAGGGAGCATC...GATTCCGACCCGCCTTGTCTTGGCCTCCCTATTTAACCATAGGATGTTGACTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS-3UTR CAA 90 bp | ATACAAACGAGCAGAAAACAAAACGATTCTCAGTGGAGTGTGTACTTGTATAAATCCAAAAGAGATTTCTaGCCGCATCCAGTGAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: IQTSRKQNDSQWSVYLYKSKRDF*PHPVSP Trigger: GGGGCTCACTGGATGCGGCAAGAAATCTCTTTTGGA...TTTATACAAGTACACACTCCACTGAGAATCGTTTTGTTTTCTGCTCGTTTGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS-3UTR CAA 90 bp | AAGTGCTTCGTGTTTCCAGAGCCTCTTAGAATATCTTTAATAACTCACAAGAAAGATGATCATCTCCGTTaGATGCCGATGAAATTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: KCFVFPEPLRISLITHKKDDHLR*MPMKFQ Trigger: CTGAAATTTCATCGGCATCAAACGGAGATGATCATC...TTTCTTGTGAGTTATTAAAGATATTCTAAGAGGCTCTGGAAACACGAAGCACTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS TCA 72 bp | CCGAGGCCGCGAAGTCCAGCCGGTTGTTGGCCGGCGTaGCGAACCAGCGCTGCGGCGACGGCGCGCCCGGGT | + |
|
Preference number: 6 (lower is better) Translates to: PRPRSPAGCWPA*RTSAAATARPG Trigger: ACCCGGGCGCGCCGTCGCCGCAGCGCTGGTTCGTCACGCCGGCCAACAACCGGCTGGACTTCGCGGCCTCGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
||
| CDS GCA 72 bp | TCCAGCCGGTTGTTGGCCGGCGTGACGAACCAGCGCTaGGGCGACGGCGCGCCCGGGTCCTCGGCCTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SSRLLAGVTNQR*GDGAPGSSACC Trigger: GCAGCAGGCCGAGGACCCGGGCGCGCCGTCGCCGCAGCGCTGGTTCGTCACGCCGGCCAACAACCGGCTGGA 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
||
| CDS GCA 72 bp | CGCCCGCGGCCGCATACGACAGCAGCGTGGCCGCGTTaGCGGCGAAGTCCGTGGCCGTGTCGTAGGCCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: RPRPHTTAAWPR*RRSPWPCRRPR Trigger: CCTCGGCCTACGACACGGCCACGGACTTCGCCGGCAACGCGGCCACGCTGCTGTCGTATGCGGCCGCGGGCG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
||
| CDS CCA 72 bp | GGGCGCCGGGCACGATCTGCGAGCGCGGAGAGTCGTTaGGCGACGGGGTCAAGCGGTCCATGTCGCAGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: GRRARSASAESR*ATGSSGPCRSP Trigger: CGGGCTGCGACATGGACCGCTTGACCCCGTCGCCCAACGACTCTCCGCGCTCGCAGATCGTGCCCGGCGCCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
||
| CDS CCA 72 bp | GCGCCTTCACGCCCGCGGCCGCATACGACAGCAGCGTaGCCGCGTTGCCGGCGAAGTCCGTGGCCGTGTCGT | + |
|
Preference number: 6 (lower is better) Translates to: APSRPRPHTTAA*PRCRRSPWPCR Trigger: ACGACACGGCCACGGACTTCGCCGGCAACGCGGCCACGCTGCTGTCGTATGCGGCCGCGGGCGTGAAGGCGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
||
| CDS CCA 72 bp | AGGGCGTCTCGATCCAGCTGGAGTCGGACAGGTCCTTaGGCTTGGCGTCCTCGGCGGCGGGCGCCAGCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: RASRSSWSRTGP*AWRPRRRAPAA Trigger: CGCCGCTGGCGCCCGCCGCCGAGGACGCCAAGCCCAAGGACCTGTCCGACTCCAGCTGGATCGAGACGCCCT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
||
| CDS CAA 72 bp | CGGGCGCCGGGCACGATCTGCGAGCGCGGAGAGTCGTaGGGCGACGGGGTCAAGCGGTCCATGTCGCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RAPGTICERGES*GDGVKRSMSQP Trigger: GGGCTGCGACATGGACCGCTTGACCCCGTCGCCCAACGACTCTCCGCGCTCGCAGATCGTGCCCGGCGCCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
||
| CDS CAA 72 bp | GTCTCGATCCAGCTGGAGTCGGACAGGTCCTTGGGCTaGGCGTCCTCGGCGGCGGGCGCCAGCGGCGAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: VSIQLESDRSLG*ASSAAGASGER Trigger: GCGCTCGCCGCTGGCGCCCGCCGCCGAGGACGCCAAGCCCAAGGACCTGTCCGACTCCAGCTGGATCGAGAC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
||
| CDS CAA 72 bp | GAGGGCGTCTCGATCCAGCTGGAGTCGGACAGGTCCTaGGGCTTGGCGTCCTCGGCGGCGGGCGCCAGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: EGVSIQLESDRS*GLASSAAGASG Trigger: GCCGCTGGCGCCCGCCGCCGAGGACGCCAAGCCCAAGGACCTGTCCGACTCCAGCTGGATCGAGACGCCCTC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
||
| CDS CCA 72 bp | CCGGGTGGTGGGCCATGTAGCGACTGGGGCTGCCGATaGAGAAGGCGGGATGCGCCGGTCCGTGCTGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PGGGPCSDWGCR*RRRDAPVRAGW Trigger: CCAGCCAGCACGGACCGGCGCATCCCGCCTTCTCCATCGGCAGCCCCAGTCGCTACATGGCCCACCACCCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS CCA 72 bp | TCTCGATCCAGCTGGAGTCGGACAGGTCCTTGGGCTTaGCGTCCTCGGCGGCGGGCGCCAGCGGCGAGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: SRSSWSRTGPWA*RPRRRAPAASA Trigger: AGCGCTCGCCGCTGGCGCCCGCCGCCGAGGACGCCAAGCCCAAGGACCTGTCCGACTCCAGCTGGATCGAGA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
||
| CDS GCA 72 bp | GGGCTGCCGATGGAGAAGGCGGGATGCGCCGGTCCGTaGTGGCTGGGGTACGGGAACATGGCACTGGGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: GLPMEKAGCAGP*WLGYGNMALGA Trigger: CGCTCCCAGTGCCATGTTCCCGTACCCCAGCCAGCACGGACCGGCGCATCCCGCCTTCTCCATCGGCAGCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS CCA 72 bp | GATGCGCCGGTCCGTGCTGGCTGGGGTACGGGAACATaGCACTGGGAGCGGTGGCCGCAGACTGTGGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: DAPVRAGWGTGT*HWERWPQTVAG Trigger: GCCAGCCACAGTCTGCGGCCACCGCTCCCAGTGCCATGTTCCCGTACCCCAGCCAGCACGGACCGGCGCATC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS CCA 72 bp | CGATGGAGAAGGCGGGATGCGCCGGTCCGTGCTGGCTaGGGTACGGGAACATGGCACTGGGAGCGGTGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: RWRRRDAPVRAG*GTGTWHWERWP Trigger: CGGCCACCGCTCCCAGTGCCATGTTCCCGTACCCCAGCCAGCACGGACCGGCGCATCCCGCCTTCTCCATCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS CCA 72 bp | CCGGTCCGTGCTGGCTGGGGTACGGGAACATGGCACTaGGAGCGGTGGCCGCAGACTGTGGCTGGCTGGACT | + |
|
Preference number: 6 (lower is better) Translates to: PVRAGWGTGTWH*ERWPQTVAGWT Trigger: AGTCCAGCCAGCCACAGTCTGCGGCCACCGCTCCCAGTGCCATGTTCCCGTACCCCAGCCAGCACGGACCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS CCA 72 bp | CTGCCGATGGAGAAGGCGGGATGCGCCGGTCCGTGCTaGCTGGGGTACGGGAACATGGCACTGGGAGCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LPMEKAGCAGPC*LGYGNMALGAV Trigger: CACCGCTCCCAGTGCCATGTTCCCGTACCCCAGCCAGCACGGACCGGCGCATCCCGCCTTCTCCATCGGCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS CCA 72 bp | CGGGACCCGCGCCGGCGCCCGGGTGGAAGCGGGCCTTaGCGTAGTTGCTCACGAACTGGTCTTGCAGGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: RDPRRRPGGSGP*RSCSRTGLAGK Trigger: CTTTCCTGCAAGACCAGTTCGTGAGCAACTACGCCAAGGCCCGCTTCCACCCGGGCGCCGGCGCGGGTCCCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
||
| CDS CAA 90 bp | GCCCGGGTGGAAGCGGGCCTTGGCGTAGTTGCTCACGAACTGGTCTaGCAGGAAAGAGCCGGCCATGGCGTAGCGGGCGCCGGGCACGAT | + |
|
Preference number: 6 (lower is better) Translates to: ARVEAGLGVVAHELV*QERAGHGVAGAGHD Trigger: ATCGTGCCCGGCGCCCGCTACGCCATGGCCGGCTCTTTCCTGCAAGACCAGTTCGTGAGCAACTACGCCAAGGCCCGCTTCCACCCGGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
||
| CDS CAA 90 bp | TTGGCGCAGTTCTTCTCGCAGTCCCGCTGGGCCAGCACCTCGCTCTaGAGCGGGGACGAGCTCTCAGACACCGGCGTGTCAGCCGGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: LAQFFSQSRWASTSL*SGDELSDTGVSAGE Trigger: CTCGCCGGCTGACACGCCGGTGTCTGAGAGCTCGTCCCCGCTCAAGAGCGAGGTGCTGGCCCAGCGGGACTGCGAGAAGAACTGCGCCAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
||
| CDS GCA 72 bp | CGCCGGCGCCCGGGTGGAAGCGGGCCTTGGCGTAGTTaGTCACGAACTGGTCTTGCAGGAAAGAGCCGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RRRPGGSGPWRS*SRTGLAGKSRP Trigger: TGGCCGGCTCTTTCCTGCAAGACCAGTTCGTGAGCAACTACGCCAAGGCCCGCTTCCACCCGGGCGCCGGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
||
| CDS CCA 72 bp | AGTGGCCGTACTGCTGTGGGTAGGGGTAGCCGGCCGTaGGGTAGCCCTGCGGCGAAGAGTTGGACAGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SGRTAVGRGSRP*GSPAAKSWTAG Trigger: GCCTGCTGTCCAACTCTTCGCCGCAGGGCTACCCCACGGCCGGCTACCCCTACCCACAGCAGTACGGCCACT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
||
| CDS CCA 72 bp | TGCTCACGAACTGGTCTTGCAGGAAAGAGCCGGCCATaGCGTAGCGGGCGCCGGGCACGATCTGCGAGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: CSRTGLAGKSRP*RSGRRARSASA Trigger: CGCGCTCGCAGATCGTGCCCGGCGCCCGCTACGCCATGGCCGGCTCTTTCCTGCAAGACCAGTTCGTGAGCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
||
| CDS TCA 72 bp | TCTTCTCGCAGTCCCGCTGGGCCAGCACCTCGCTCTTaGGCGGGGACGAGCTCTCAGACACCGGCGTGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: SSRSPAGPAPRS*AGTSSQTPACQ Trigger: CTGACACGCCGGTGTCTGAGAGCTCGTCCCCGCTCAAGAGCGAGGTGCTGGCCCAGCGGGACTGCGAGAAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
||
| CDS CCA 72 bp | ACACCGGCGTGTCAGCCGGCGAGATCCGCCTCCGCTTaGCCTGCTCGTAAATCCCCGAGTCGCTGGAGTCGA | + |
|
Preference number: 6 (lower is better) Translates to: TPACQPARSASA*PARKSPSRWSR Trigger: TCGACTCCAGCGACTCGGGGATTTACGAGCAGGCCAAGCGGAGGCGGATCTCGCCGGCTGACACGCCGGTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS CAA 72 bp | GAAGCGGGCCTTGGCGTAGTTGCTCACGAACTGGTCTaGCAGGAAAGAGCCGGCCATGGCGTAGCGGGCGCC | + |
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Preference number: 6 (lower is better) Translates to: EAGLGVVAHELV*QERAGHGVAGA Trigger: GGCGCCCGCTACGCCATGGCCGGCTCTTTCCTGCAAGACCAGTTCGTGAGCAACTACGCCAAGGCCCGCTTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS CAA 72 bp | TTCTTCTCGCAGTCCCGCTGGGCCAGCACCTCGCTCTaGAGCGGGGACGAGCTCTCAGACACCGGCGTGTCA | + |
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Preference number: 6 (lower is better) Translates to: FFSQSRWASTSL*SGDELSDTGVS Trigger: TGACACGCCGGTGTCTGAGAGCTCGTCCCCGCTCAAGAGCGAGGTGCTGGCCCAGCGGGACTGCGAGAAGAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS CAA 90 bp | CACCAACCCGGGCTGGGTGGAGGAGAACTGGTAGAAAGGGGCTCCTaGGTAGGAGTGGCCGTACTGCTGTGGGTAGGGGTAGCCGGCCGT | + |
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Preference number: 6 (lower is better) Translates to: HQPGLGGGELVERGS*VGVAVLLWVGVAGR Trigger: ACGGCCGGCTACCCCTACCCACAGCAGTACGGCCACTCCTACCAAGGAGCCCCTTTCTACCAGTTCTCCTCCACCCAGCCCGGGTTGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS GCA 72 bp | GCCAAAGTGGCCTGTTGCACAGGTATACTTGCGCCTTaGCGGGCACCAACCCGGGCTGGGTGGAGGAGAACT | + |
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Preference number: 6 (lower is better) Translates to: AKVACCTGILAP*RAPTRAGWRRT Trigger: AGTTCTCCTCCACCCAGCCCGGGTTGGTGCCCGGCAAGGCGCAAGTATACCTGTGCAACAGGCCACTTTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS GCA 72 bp | ACGTCTGGACTCGGCCTGGCTGGCTGGTGTCCTCTGTaGCATCCTCATTCACTTCCACCACGTGCAGACGGG | + |
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Preference number: 6 (lower is better) Translates to: TSGLGLAGWCPL*HPHSLPPRADG Trigger: CCCGTCTGCACGTGGTGGAAGTGAATGAGGATGGCACAGAGGACACCAGCCAGCCAGGCCGAGTCCAGACGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS CCA 72 bp | TGGCACTGGGAGCGGTGGCCGCAGACTGTGGCTGGCTaGACTGAGAGAGTAGGTAACGATCTGCAGCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: WHWERWPQTVAG*TERVGNDLQQS Trigger: GCTCTGCTGCAGATCGTTACCTACTCTCTCAGTCCAGCCAGCCACAGTCTGCGGCCACCGCTCCCAGTGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS CAA 72 bp | GGGCTGGGTGGAGGAGAACTGGTAGAAAGGGGCTCCTaGGTAGGAGTGGCCGTACTGCTGTGGGTAGGGGTA | + |
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Preference number: 6 (lower is better) Translates to: GLGGGELVERGS*VGVAVLLWVGV Trigger: TACCCCTACCCACAGCAGTACGGCCACTCCTACCAAGGAGCCCCTTTCTACCAGTTCTCCTCCACCCAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS TCA 72 bp | GCTCGTAAATCCCCGAGTCGCTGGAGTCGATGGATTTaGTGGAGGAGGGCGTCTCGATCCAGCTGGAGTCGG | + |
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Preference number: 6 (lower is better) Translates to: ARKSPSRWSRWI*WRRASRSSWSR Trigger: CCGACTCCAGCTGGATCGAGACGCCCTCCTCCATCAAATCCATCGACTCCAGCGACTCGGGGATTTACGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS CCA 72 bp | TGTGCGAGTAGAAGCCATAGTAGCCGCCTATGTCCTTaGCGCAGTTCTTCTCGCAGTCCCGCTGGGCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: CASRSHSSRLCP*RSSSRSPAGPA Trigger: TGCTGGCCCAGCGGGACTGCGAGAAGAACTGCGCCAAGGACATAGGCGGCTACTATGGCTTCTACTCGCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048934.15 ENSMUST00000102737.5 |
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| CDS CCA 72 bp | GAGACCCCGTCCAAGACAGGAGAGAGTTTACTTCTCTaGACGTCCCCTGGTGAGTCCTTGGAGTCAGGAAAA | + |
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Preference number: 6 (lower is better) Translates to: ETPSKTGESLLL*TSPGESLESGK Trigger: TTTTCCTGACTCCAAGGACTCACCAGGGGACGTCCAGAGAAGTAAACTCTCTCCTGTCTTGGACGGGGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS GCA 72 bp | TTTGATGCCGATGAAATTTCAGCCAAAGTGGCCTGTTaGACAGGTATACTTGCGCCTTGCCGGGCACCAACC | + |
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Preference number: 6 (lower is better) Translates to: FDADEISAKVAC*TGILAPCRAPT Trigger: GGTTGGTGCCCGGCAAGGCGCAAGTATACCTGTGCAACAGGCCACTTTGGCTGAAATTTCATCGGCATCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS GCA 72 bp | TATAGACCCGGTTTCCTTGCACATTGGTGTCCGCTTTaGCACAAGGAACCCATTTGCCTCCTTGAAACCTCC | + |
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Preference number: 6 (lower is better) Translates to: YRPGFLAHWCPL*HKEPICLLETS Trigger: GGAGGTTTCAAGGAGGCAAATGGGTTCCTTGTGGCAAAGCGGACACCAATGTGCAAGGAAACCGGGTCTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS TCA 72 bp | CTTCTCTCCAGGTTGTCAGTGGTCGAGATAATGGGATaGTCATGCAAGACAAGCTCAGATCCGCCCGAATGT | + |
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Preference number: 6 (lower is better) Translates to: LLSRLSVVEIMG*SCKTSSDPPEC Trigger: ACATTCGGGCGGATCTGAGCTTGTCTTGCATGATCATCCCATTATCTCGACCACTGACAACCTGGAGAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS CCA 72 bp | ATGATCATGCAAGACAAGCTCAGATCCGCCCGAATGTaGGTAGCTGCTGCTCACATTGAGAAATTTCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: MIMQDKLRSARM*VAAAHIEKFLG Trigger: TCCAAGAAATTTCTCAATGTGAGCAGCAGCTACCCACATTCGGGCGGATCTGAGCTTGTCTTGCATGATCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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| CDS CCA 72 bp | AGAGTTTACTTCTCTGGACGTCCCCTGGTGAGTCCTTaGAGTCAGGAAAATTGTCTGTATCTGACTGATTCG | + |
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Preference number: 6 (lower is better) Translates to: RVYFSGRPLVSP*SQENCLYLTDS Trigger: CGAATCAGTCAGATACAGACAATTTTCCTGACTCCAAGGACTCACCAGGGGACGTCCAGAGAAGTAAACTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048934.15 |
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