Pregenerated sensors for TBP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000014767Ensembl transcript IDs: ENSMUST00000014911.12, ENSMUST00000117593.8, ENSMUST00000118001.8, ENSMUST00000119879.9, ENSMUST00000143924.8, ENSMUST00000147081.9, ENSMUST00000155051.8, ENSMUST00000159197.8, ENSMUST00000162505.8
Found 269 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCAGCGAGCAGTTTCCCAGCAAAGTGGGCGGGCGGCCCGCGTGGTTaGGCTTGGCGGAGCTGCCGGGGCCCGGGGCGCTGGCGTGTGCGC | + |
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Preference number: 1 (lower is better) Translates to: AASSFPAKWAGGPRG*AWRSCRGPGRWRVR Trigger: GCGCACACGCCAGCGCCCCGGGCCCCGGCAGCTCCGCCAAGCCCAACCACGCGGGCCGCCCGCCCACTTTGCTGGGAAACTGCTCGCTGC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
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| 3UTR CCA 90 bp | GTCCTGCTGCGAGCATGGCTGCAGCCGCCCCTGGTCCTGTGGAGTTaGGCTTCGCCGAGGAGGCACCGGCCTGGAGGCTGCGCAGCGAGC | + |
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Preference number: 1 (lower is better) Translates to: VLLRAWLQPPLVLWS*ASPRRHRPGGCAAS Trigger: GCTCGCTGCGCAGCCTCCAGGCCGGTGCCTCCTCGGCGAAGCCCAACTCCACAGGACCAGGGGCGGCTGCAGCCATGCTCGCAGCAGGAC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
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| 3UTR GCA 90 bp | CCGCCCTCTTCCGGCCTGGTGGCAGAGTCCTGCTGCGAGCATGGCTaGAGCCGCCCCTGGTCCTGTGGAGTTGGGCTTCGCCGAGGAGGC | + |
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Preference number: 1 (lower is better) Translates to: PPSSGLVAESCCEHG*SRPWSCGVGLRRGG Trigger: GCCTCCTCGGCGAAGCCCAACTCCACAGGACCAGGGGCGGCTGCAGCCATGCTCGCAGCAGGACTCTGCCACCAGGCCGGAAGAGGGCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
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| 3UTR CCA 90 bp | GGCAGAGTCCTGCTGCGAGCATGGCTGCAGCCGCCCCTGGTCCTGTaGAGTTGGGCTTCGCCGAGGAGGCACCGGCCTGGAGGCTGCGCA | + |
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Preference number: 1 (lower is better) Translates to: GRVLLRAWLQPPLVL*SWASPRRHRPGGCA Trigger: TGCGCAGCCTCCAGGCCGGTGCCTCCTCGGCGAAGCCCAACTCCACAGGACCAGGGGCGGCTGCAGCCATGCTCGCAGCAGGACTCTGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
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| 3UTR CCA 90 bp | GGCCTGGTGGCAGAGTCCTGCTGCGAGCATGGCTGCAGCCGCCCCTaGTCCTGTGGAGTTGGGCTTCGCCGAGGAGGCACCGGCCTGGAG | + |
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Preference number: 1 (lower is better) Translates to: GLVAESCCEHGCSRP*SCGVGLRRGGTGLE Trigger: CTCCAGGCCGGTGCCTCCTCGGCGAAGCCCAACTCCACAGGACCAGGGGCGGCTGCAGCCATGCTCGCAGCAGGACTCTGCCACCAGGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
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| 3UTR CCA 90 bp | CGCCTCCCGCCTTCCGGCCTAACACGTGACCGCCCTCTTCCGGCCTaGTGGCAGAGTCCTGCTGCGAGCATGGCTGCAGCCGCCCCTGGT | + |
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Preference number: 1 (lower is better) Translates to: RLPPSGLTRDRPLPA*WQSPAASMAAAAPG Trigger: ACCAGGGGCGGCTGCAGCCATGCTCGCAGCAGGACTCTGCCACCAGGCCGGAAGAGGGCGGTCACGTGTTAGGCCGGAAGGCGGGAGGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
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| 3UTR CCA 90 bp | GTGACCGCCCTCTTCCGGCCTGGTGGCAGAGTCCTGCTGCGAGCATaGCTGCAGCCGCCCCTGGTCCTGTGGAGTTGGGCTTCGCCGAGG | + |
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Preference number: 1 (lower is better) Translates to: VTALFRPGGRVLLRA*LQPPLVLWSWASPR Trigger: CCTCGGCGAAGCCCAACTCCACAGGACCAGGGGCGGCTGCAGCCATGCTCGCAGCAGGACTCTGCCACCAGGCCGGAAGAGGGCGGTCAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
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| 3UTR CCA 90 bp | CTCCCGCCTTCCGGCCTAACACGTGACCGCCCTCTTCCGGCCTGGTaGCAGAGTCCTGCTGCGAGCATGGCTGCAGCCGCCCCTGGTCCT | + |
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Preference number: 1 (lower is better) Translates to: LPPSGLTRDRPLPAW*QSPAASMAAAAPGP Trigger: AGGACCAGGGGCGGCTGCAGCCATGCTCGCAGCAGGACTCTGCCACCAGGCCGGAAGAGGGCGGTCACGTGTTAGGCCGGAAGGCGGGAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
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| 3UTR CCA 90 bp | AACAGAAGCTTTGGGTACGGAATGTGTGTGCCTCCAGCTCAAGTCTaGAGCCCATCTCTGTCGGGTTTGTGGTTGCTTGGCCCCTATGAC | + |
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Preference number: 1 (lower is better) Translates to: NRSFGYGMCVPPAQV*SPSLSGLWLLGPYD Trigger: GTCATAGGGGCCAAGCAACCACAAACCCGACAGAGATGGGCTCCAGACTTGAGCTGGAGGCACACACATTCCGTACCCAAAGCTTCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
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| 3UTR TCA 90 bp | ATCAGGAAGCGCACAACTACCTGTAATAGCCAGCTCCAGAGGATCTaGTGCCCTTTTTCTGGCCCCTGTGGGCATGCATGCATATGTGGC | + |
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Preference number: 1 (lower is better) Translates to: IRKRTTTCNSQLQRI*CPFSGPCGHACICG Trigger: GCCACATATGCATGCATGCCCACAGGGGCCAGAAAAAGGGCATCAGATCCTCTGGAGCTGGCTATTACAGGTAGTTGTGCGCTTCCTGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
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| 3UTR GCA 90 bp | TATGAGCCCCCTTCTGAAACAGAAGCTTTGGGTACGGAATGTGTGTaGCTCCAGCTCAAGTCTGGAGCCCATCTCTGTCGGGTTTGTGGT | + |
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Preference number: 1 (lower is better) Translates to: YEPPSETEALGTECV*LQLKSGAHLCRVCG Trigger: ACCACAAACCCGACAGAGATGGGCTCCAGACTTGAGCTGGAGGCACACACATTCCGTACCCAAAGCTTCTGTTTCAGAAGGGGGCTCATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
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| 3UTR CCA 90 bp | TTGGCTACTTCCTCTAGAGTCCATGCTTTGGGGCTGTGTCTTTGTTaGCCCACACAGGTGCTGATCATCAGTCCAGCATTCACCCTGCCT | + |
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Preference number: 1 (lower is better) Translates to: LATSSRVHALGLCLC*PTQVLIISPAFTLP Trigger: AGGCAGGGTGAATGCTGGACTGATGATCAGCACCTGTGTGGGCCAACAAAGACACAGCCCCAAAGCATGGACTCTAGAGGAAGTAGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
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| 3UTR TCA 90 bp | CCAAGTAGCAGCACAGAGCAAGCAACTCACAGTAGTGCTGCAGGGTaGTTTCAGTGCAGAGGGGGAACCTTTCTAGTATCCTGCAGTAGG | + |
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Preference number: 1 (lower is better) Translates to: PSSSTEQATHSSAAG*FQCRGGTFLVSCSR Trigger: CCTACTGCAGGATACTAGAAAGGTTCCCCCTCTGCACTGAAATCACCCTGCAGCACTACTGTGAGTTGCTTGCTCTGTGCTGCTACTTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
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| 3UTR TCA 90 bp | GAGTCCATGCTTTGGGGCTGTGTCTTTGTTGGCCCACACAGGTGCTaGTCATCAGTCCAGCATTCACCCTGCCTCAAGATTGCTTATTCA | + |
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Preference number: 1 (lower is better) Translates to: ESMLWGCVFVGPHRC*SSVQHSPCLKIAYS Trigger: TGAATAAGCAATCTTGAGGCAGGGTGAATGCTGGACTGATGATCAGCACCTGTGTGGGCCAACAAAGACACAGCCCCAAAGCATGGACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
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| 3UTR TCA 90 bp | CCTGCAGTAGGACACACAGTGTCACTTCATGCTGCCACCTGTAACTaGGTGTCCTCACCAACTGTACCATCAGTGGTACCAAAACTGACT | + |
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Preference number: 1 (lower is better) Translates to: PAVGHTVSLHAATCN*VSSPTVPSVVPKLT Trigger: AGTCAGTTTTGGTACCACTGATGGTACAGTTGGTGAGGACACTCAGTTACAGGTGGCAGCATGAAGTGACACTGTGTGTCCTACTGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
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| 3UTR TCA 90 bp | GAATGTGTGAGCACCACAAAGTACCTGGTACTTTCAGAGGCCAGATaGTGCTGGGTTCTGTGGAAGTTAGATACTTGTGAGCAGCTGGGT | + |
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Preference number: 1 (lower is better) Translates to: ECVSTTKYLVLSEAR*CWVLWKLDTCEQLG Trigger: ACCCAGCTGCTCACAAGTATCTAACTTCCACAGAACCCAGCATCATCTGGCCTCTGAAAGTACCAGGTACTTTGTGGTGCTCACACATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
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| 3UTR CCA 90 bp | ATAGCGGAAGATGAAGACACCCACTCACTAATCTGGACGTTACCCTaGGGAAACAGGAAAGGCTGGGAAGAAAAAGACTTCCTTCTGATT | + |
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Preference number: 1 (lower is better) Translates to: IAEDEDTHSLIWTLP*GNRKGWEEKDFLLI Trigger: AATCAGAAGGAAGTCTTTTTCTTCCCAGCCTTTCCTGTTTCCCCAGGGTAACGTCCAGATTAGTGAGTGGGTGTCTTCATCTTCCGCTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
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| 3UTR CCA 90 bp | ACCCACTCACTAATCTGGACGTTACCCTGGGGAAACAGGAAAGGCTaGGAAGAAAAAGACTTCCTTCTGATTACACATACTTGGAACTGT | + |
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Preference number: 1 (lower is better) Translates to: THSLIWTLPWGNRKG*EEKDFLLITHTWNC Trigger: ACAGTTCCAAGTATGTGTAATCAGAAGGAAGTCTTTTTCTTCCCAGCCTTTCCTGTTTCCCCAGGGTAACGTCCAGATTAGTGAGTGGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
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| 3UTR TCA 90 bp | GAAAAAGACTCAGACAGAGGTGTGAGTGTGGCTTCACATCCCAAATaGCCAGCAATGCTGTCTGCTCAGAATGTATTACAGAAAGTTCTA | + |
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Preference number: 1 (lower is better) Translates to: EKDSDRGVSVASHPK*PAMLSAQNVLQKVL Trigger: TAGAACTTTCTGTAATACATTCTGAGCAGACAGCATTGCTGGTCATTTGGGATGTGAAGCCACACTCACACCTCTGTCTGAGTCTTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
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| 3UTR GCA 90 bp | CTCTCTTCCGGCCTTGACGTGCACATACATACTTACATACATTTCTaGAAAATATTCTCTCAGAACACATGTGCCATAGGAACTACCTGG | + |
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Preference number: 1 (lower is better) Translates to: LSSGLDVHIHTYIHF*KIFSQNTCAIGTTW Trigger: CCAGGTAGTTCCTATGGCACATGTGTTCTGAGAGAATATTTTGCAGAAATGTATGTAAGTATGTATGTGCACGTCAAGGCCGGAAGAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
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| 3UTR CCA 90 bp | TATAGGAATCTATGTACGTATTCAAAACACACATACAAGAATACCTaGTCCAACACTGTACAGCACTGTGCACTGCCATCACTAGGGGAG | + |
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Preference number: 1 (lower is better) Translates to: YRNLCTYSKHTYKNT*SNTVQHCALPSLGE Trigger: CTCCCCTAGTGATGGCAGTGCACAGTGCTGTACAGTGTTGGACCAGGTATTCTTGTATGTGTGTTTTGAATACGTACATAGATTCCTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
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| 3UTR TCA 90 bp | CATGGCACTTTTCTAACTCCAGATCCAAGTGCTCTCTTCCGGCCTTaGCGTGCACATACATACTTACATACATTTCTGCAAAATATTCTC | + |
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Preference number: 1 (lower is better) Translates to: HGTFLTPDPSALFRP*RAHTYLHTFLQNIL Trigger: GAGAATATTTTGCAGAAATGTATGTAAGTATGTATGTGCACGTCAAGGCCGGAAGAGAGCACTTGGATCTGGAGTTAGAAAAGTGCCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
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| 3UTR CCA 90 bp | ACAATTGGTAGTCATGAAAGTGTTTTCCTTCAGAAAGGATGTTATTaGGAGGGCTGGTGTACTCAAGAGTTGAGTGTAAGACTCAGCAAT | + |
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Preference number: 1 (lower is better) Translates to: TIGSHESVFLQKGCY*EGWCTQELSVRLSN Trigger: ATTGCTGAGTCTTACACTCAACTCTTGAGTACACCAGCCCTCCCAATAACATCCTTTCTGAAGGAAAACACTTTCATGACTACCAATTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
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| 3UTR CCA 90 bp | AGTCATGAAAGTGTTTTCCTTCAGAAAGGATGTTATTGGGAGGGCTaGTGTACTCAAGAGTTGAGTGTAAGACTCAGCAATCATCTATAT | + |
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Preference number: 1 (lower is better) Translates to: SHESVFLQKGCYWEG*CTQELSVRLSNHLY Trigger: ATATAGATGATTGCTGAGTCTTACACTCAACTCTTGAGTACACCAGCCCTCCCAATAACATCCTTTCTGAAGGAAAACACTTTCATGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
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| 3UTR TCA 90 bp | TGTGTGGGAAAGATTAAAATGAAAAGTCCAATTGTACAGGTGGCTTaGACACTTAAAGTTCTGTCCCTTAAACCAACAATCACCAACAGC | + |
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Preference number: 1 (lower is better) Translates to: CVGKIKMKSPIVQVA*TLKVLSLKPTITNS Trigger: GCTGTTGGTGATTGTTGGTTTAAGGGACAGAACTTTAAGTGTTCAAGCCACCTGTACAATTGGACTTTTCATTTTAATCTTTCCCACACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
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| 3UTR TCA 90 bp | GGGTCTGGGAAAAGAGTAGTACAGATTTGCAAAAAGATGAAGGTCTaGATTTATATTGGAAGATGCCGGCAACTACATTTATCTACAACA | + |
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Preference number: 1 (lower is better) Translates to: GSGKRVVQICKKMKV*IYIGRCRQLHLSTT Trigger: TGTTGTAGATAAATGTAGTTGCCGGCATCTTCCAATATAAATTCAGACCTTCATCTTTTTGCAAATCTGTACTACTCTTTTCCCAGACCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
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| 3UTR GCA 90 bp | AAAGTATGTACAGCCATTGTTTTGATTAATACAACTATTCAGTCCTaGAATACTGGGAAGGCGGAATGTATCTGGCACAAAAATAACTCC | + |
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Preference number: 1 (lower is better) Translates to: KVCTAIVLINTTIQS*NTGKAECIWHKNNS Trigger: GGAGTTATTTTTGTGCCAGATACATTCCGCCTTCCCAGTATTGCAGGACTGAATAGTTGTATTAATCAAAACAATGGCTGTACATACTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
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| 3UTR CAA 90 bp | AGTCCTGCTGCGAGCATGGCTGCAGCCGCCCCTGGTCCTGTGGAGTaGGGCTTCGCCGAGGAGGCACCGGCCTGGAGGCTGCGCAGCGAG | + |
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Preference number: 2 (lower is better) Translates to: SPAASMAAAAPGPVE*GFAEEAPAWRLRSE Trigger: CTCGCTGCGCAGCCTCCAGGCCGGTGCCTCCTCGGCGAAGCCCAACTCCACAGGACCAGGGGCGGCTGCAGCCATGCTCGCAGCAGGACT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
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| 3UTR-3UTR CCA 90 bp | GTGTGCCTCCAGCTCAAGTCTGGAGCCCATCTCTGTCGGGTTTGTGGTTGCTTGGCTGACATTCCAGTGTaGGGTCAGTGCCTGTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: VCLQLKSGAHLCRVCGCLADIPV*GQCLWL Trigger: CAGCCACAGGCACTGACCCCACACTGGAATGTCAGC...CAAGCAACCACAAACCCGACAGAGATGGGCTCCAGACTTGAGCTGGAGGCACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
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| 3UTR-3UTR CCA 90 bp | GTGTGCCTCCAGCTCAAGTCTGGAGCCCATCTCTGTCGGGTTTGTGGTTGCTTGCTGATGCCCTTTTTCTaGCCCCTGTGGGCATGCATG | + |
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Preference number: 2 (lower is better) Translates to: VCLQLKSGAHLCRVCGCLLMPFF*PLWACM Trigger: CATGCATGCCCACAGGGGCCAGAAAAAGGGCATCAG...CAAGCAACCACAAACCCGACAGAGATGGGCTCCAGACTTGAGCTGGAGGCACAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
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| 3UTR-3UTR CCA 90 bp | GTGTGCCTCCAGCTCAAGTCTGGAGCCCATCTCTGTCGGGTTTGTGGTTGCTTGGGAGAGATGGCTCAGTaGTTAAAAGCACTGACTGCT | + |
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Preference number: 2 (lower is better) Translates to: VCLQLKSGAHLCRVCGCLGEMAQ*LKALTA Trigger: AGCAGTCAGTGCTTTTAACCACTGAGCCATCTCTCC...CAAGCAACCACAAACCCGACAGAGATGGGCTCCAGACTTGAGCTGGAGGCACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
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| 3UTR-3UTR TCA 90 bp | GTAGCAGCACAGAGCAAGCAACTCACAGTAGTGCTGCAGGGTGATTTCAGTGCAGCTGCCACCTGTAACTaGGTGTCCTCACCAACTGTA | + |
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Preference number: 2 (lower is better) Translates to: VAAQSKQLTVVLQGDFSAAATCN*VSSPTV Trigger: TACAGTTGGTGAGGACACTCAGTTACAGGTGGCAGC...TGCACTGAAATCACCCTGCAGCACTACTGTGAGTTGCTTGCTCTGTGCTGCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
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| 3UTR CAA 90 bp | AACAACGCATTCTACTCCTATGAGCCCCCTTCTGAAACAGAAGCTTaGGGTACGGAATGTGTGTGCCTCCAGCTCAAGTCTGGAGCCCAT | + |
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Preference number: 2 (lower is better) Translates to: NNAFYSYEPPSETEA*GTECVCLQLKSGAH Trigger: ATGGGCTCCAGACTTGAGCTGGAGGCACACACATTCCGTACCCAAAGCTTCTGTTTCAGAAGGGGGCTCATAGGAGTAGAATGCGTTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
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| 3UTR CAA 90 bp | GAATGTACCCAGCTAGGCACTCACTTGATTACATCTGGGTCAATCTaGGAAGTCCACAGATTCAAGGCTAAGTGCCTGATCAGTCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: ECTQLGTHLITSGSI*EVHRFKAKCLISLG Trigger: GCCCAGACTGATCAGGCACTTAGCCTTGAATCTGTGGACTTCCAAGATTGACCCAGATGTAATCAAGTGAGTGCCTAGCTGGGTACATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
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| 3UTR CAA 90 bp | CACTTTCACATACATCCTTTGGCTACTTCCTCTAGAGTCCATGCTTaGGGGCTGTGTCTTTGTTGGCCCACACAGGTGCTGATCATCAGT | + |
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Preference number: 2 (lower is better) Translates to: HFHIHPLATSSRVHA*GLCLCWPTQVLIIS Trigger: ACTGATGATCAGCACCTGTGTGGGCCAACAAAGACACAGCCCCAAAGCATGGACTCTAGAGGAAGTAGCCAAAGGATGTATGTGAAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
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| 3UTR-3UTR GCA 90 bp | TGTTATTGGGAGGGCTGGTGTACTCAAGAGTTGAGTGTAAGACTCAGCAATCATCCCTGTGGGCATGCATaGATATGTGGCATAACCCCC | + |
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Preference number: 2 (lower is better) Translates to: CYWEGWCTQELSVRLSNHPCGHA*ICGITP Trigger: GGGGGTTATGCCACATATGCATGCATGCCCACAGGG...ATGATTGCTGAGTCTTACACTCAACTCTTGAGTACACCAGCCCTCCCAATAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
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| 3UTR-3UTR GCA 90 bp | GAGGGCAATCTAGGCAACATAGTAAGAGCCTGTCTACTGACAATAAGCCATGTTCCCAGCGACACACTTTaGCTCATGCTTCCAGTGAAC | + |
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Preference number: 2 (lower is better) Translates to: EGNLGNIVRACLLTISHVPSDTL*LMLPVN Trigger: GTTCACTGGAAGCATGAGGCAAAGTGTGTCGCTGGG...AACATGGCTTATTGTCAGTAGACAGGCTCTTACTATGTTGCCTAGATTGCCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
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| 3UTR-3UTR CCA 90 bp | GATGTTGGCAAGCCCAAATCAATGTGTGGGTGGTGCCACCCCTGGGAGTATAAGGTCCAATTGTACAGGTaGCTTGAACACTTAAAGTTC | + |
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Preference number: 2 (lower is better) Translates to: DVGKPKSMCGWCHPWEYKVQLYR*LEHLKF Trigger: GAACTTTAAGTGTTCAAGCCACCTGTACAATTGGAC...CTTATACTCCCAGGGGTGGCACCACCCACACATTGATTTGGGCTTGCCAACATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
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| 3UTR-3UTR CCA 90 bp | GTGTGCCTCCAGCTCAAGTCTGGAGCCCATCTCTGTCGGGTTTGTGGTTGCTTGTTTAAACCACTGTCTTaGTTTGTTTTGTCAACTCGA | + |
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Preference number: 2 (lower is better) Translates to: VCLQLKSGAHLCRVCGCLFKPLS*FVLSTR Trigger: TCGAGTTGACAAAACAAACCAAGACAGTGGTTTAAA...CAAGCAACCACAAACCCGACAGAGATGGGCTCCAGACTTGAGCTGGAGGCACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
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| 3UTR-3UTR TCA 90 bp | ATTAATACAACTATTCAGTCCTGCAATACTGGGAAGGCGGAATGTATCTGGCACGCTGCCACCTGTAACTaGGTGTCCTCACCAACTGTA | + |
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Preference number: 2 (lower is better) Translates to: INTTIQSCNTGKAECIWHAATCN*VSSPTV Trigger: TACAGTTGGTGAGGACACTCAGTTACAGGTGGCAGC...GTGCCAGATACATTCCGCCTTCCCAGTATTGCAGGACTGAATAGTTGTATTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
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| 3UTR-3UTR TCA 90 bp | GTCCAATTGTACAGGTGGCTTGAACACTTAAAGTTCTGTCCCTTAAACCAACAAAGTAGTGCTGCAGGGTaGTTTCAGTGCAGAGGGGGA | + |
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Preference number: 2 (lower is better) Translates to: VQLYRWLEHLKFCPLNQQSSAAG*FQCRGG Trigger: TCCCCCTCTGCACTGAAATCACCCTGCAGCACTACT...TTGTTGGTTTAAGGGACAGAACTTTAAGTGTTCAAGCCACCTGTACAATTGGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGATCAGTCTGGGCTAAGTGGTTGCAAGATCCCTTCTCACTTTAAACCACTGACAACTATTCAGTCCTaGAATACTGGGAAGGCGGAA | + |
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Preference number: 2 (lower is better) Translates to: PDQSGLSGCKIPSHFKPLTTIQS*NTGKAE Trigger: TTCCGCCTTCCCAGTATTGCAGGACTGAATAGTTGT...CAGTGGTTTAAAGTGAGAAGGGATCTTGCAACCACTTAGCCCAGACTGATCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
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| 3UTR-3UTR TCA 90 bp | GTCCAATTGTACAGGTGGCTTGAACACTTAAAGTTCTGTCCCTTAAACCAACAAGCTGCCACCTGTAACTaGGTGTCCTCACCAACTGTA | + |
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Preference number: 2 (lower is better) Translates to: VQLYRWLEHLKFCPLNQQAATCN*VSSPTV Trigger: TACAGTTGGTGAGGACACTCAGTTACAGGTGGCAGC...TTGTTGGTTTAAGGGACAGAACTTTAAGTGTTCAAGCCACCTGTACAATTGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
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| 3UTR-3UTR TCA 90 bp | CTTGAACACTTAAAGTTCTGTCCCTTAAACCAACAATCACCAACAGCAGTGTTTAGTAGTGCTGCAGGGTaGTTTCAGTGCAGAGGGGGA | + |
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Preference number: 2 (lower is better) Translates to: LEHLKFCPLNQQSPTAVFSSAAG*FQCRGG Trigger: TCCCCCTCTGCACTGAAATCACCCTGCAGCACTACT...AAACACTGCTGTTGGTGATTGTTGGTTTAAGGGACAGAACTTTAAGTGTTCAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
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| 3UTR-3UTR TCA 90 bp | TGTCTGCTCACGCGTGTACTGTTGCTCATGTTTTTACAATTGGTAGTCATGAAAACTCAGACAGAGGTGTaGGTGTGGCTTCACATCCCA | + |
|
Preference number: 2 (lower is better) Translates to: CLLTRVLLLMFLQLVVMKTQTEV*VWLHIP Trigger: TGGGATGTGAAGCCACACTCACACCTCTGTCTGAGT...TTTCATGACTACCAATTGTAAAAACATGAGCAACAGTACACGCGTGAGCAGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTGATCAGTCTGGGCTAAGTGGTTGCAAGATCCCTTCTCACTTTAAACCACTGGGAAACAGGAAAGGCTaGGAAGAAAAAGACTTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: PDQSGLSGCKIPSHFKPLGNRKG*EEKDFL Trigger: AAGGAAGTCTTTTTCTTCCCAGCCTTTCCTGTTTCC...CAGTGGTTTAAAGTGAGAAGGGATCTTGCAACCACTTAGCCCAGACTGATCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTTATTGGGAGGGCTGGTGTACTCAAGAGTTGAGTGTAAGACTCAGCAATCATCTCTTCTGGTGTCTCTaGAGAGTAACAGTGTACTCA | + |
|
Preference number: 2 (lower is better) Translates to: CYWEGWCTQELSVRLSNHLFWCL*RVTVYS Trigger: TGAGTACACTGTTACTCTTCAGAGACACCAGAAGAG...ATGATTGCTGAGTCTTACACTCAACTCTTGAGTACACCAGCCCTCCCAATAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR-3UTR TCA 90 bp | TGCCACATTTTGTATGCAGACTCCAGTAATGAGTTAGTACAGAGTAGTGATAGGCAAAGTCCTGGCCTATaGGTTCATACCACCTACGTG | + |
|
Preference number: 2 (lower is better) Translates to: CHILYADSSNELVQSSDRQSPGL*VHTTYV Trigger: CACGTAGGTGGTATGAACTCATAGGCCAGGACTTTG...CCTATCACTACTCTGTACTAACTCATTACTGGAGTCTGCATACAAAATGTGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR-3UTR GCA 90 bp | GAGGGCAATCTAGGCAACATAGTAAGAGCCTGTCTACTGACAATAAGCCATGTTAAAGATATTCCAGATTaGCCGTGTGGTGCCAAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: EGNLGNIVRACLLTISHVKDIPD*PCGAKR Trigger: TCTCTTGGCACCACACGGGCAATCTGGAATATCTTT...AACATGGCTTATTGTCAGTAGACAGGCTCTTACTATGTTGCCTAGATTGCCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTCTGCTCACGCGTGTACTGTTGCTCATGTTTTTACAATTGGTAGTCATGAAAGAACCTCAGTCTCTGTaGATCCTGGCTCTATATGGC | + |
|
Preference number: 2 (lower is better) Translates to: CLLTRVLLLMFLQLVVMKEPQSL*ILALYG Trigger: GCCATATAGAGCCAGGATGCACAGAGACTGAGGTTC...TTTCATGACTACCAATTGTAAAAACATGAGCAACAGTACACGCGTGAGCAGACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTTATTGGGAGGGCTGGTGTACTCAAGAGTTGAGTGTAAGACTCAGCAATCATATTGTACAGGTGGCTTaGACACTTAAAGTTCTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: CYWEGWCTQELSVRLSNHIVQVA*TLKVLS Trigger: GGACAGAACTTTAAGTGTTCAAGCCACCTGTACAAT...ATGATTGCTGAGTCTTACACTCAACTCTTGAGTACACCAGCCCTCCCAATAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTTATTGGGAGGGCTGGTGTACTCAAGAGTTGAGTGTAAGACTCAGCAATCATGGCTTTGGCAAAGGCTaGAAAAGGAACAAAACAACT | + |
|
Preference number: 2 (lower is better) Translates to: CYWEGWCTQELSVRLSNHGFGKG*KRNKTT Trigger: AGTTGTTTTGTTCCTTTTTCAGCCTTTGCCAAAGCC...ATGATTGCTGAGTCTTACACTCAACTCTTGAGTACACCAGCCCTCCCAATAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGGGCAATCTAGGCAACATAGTAAGAGCCTGTCTACTGACAATAAGCCATGTTCAGACGTTTGAGTTGTaGAATTATGGGATCATCCCA | + |
|
Preference number: 2 (lower is better) Translates to: EGNLGNIVRACLLTISHVQTFEL*NYGIIP Trigger: TGGGATGATCCCATAATTTCACAACTCAAACGTCTG...AACATGGCTTATTGTCAGTAGACAGGCTCTTACTATGTTGCCTAGATTGCCCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTGATCAGTCTGGGCTAAGTGGTTGCAAGATCCCTTCTCACTTTAAACCACTGTTAGAAGTGTCCACCTaGTATTTCAAGAGAAAACAG | + |
|
Preference number: 2 (lower is better) Translates to: PDQSGLSGCKIPSHFKPLLEVST*YFKRKQ Trigger: CTGTTTTCTCTTGAAATACCAGGTGGACACTTCTAA...CAGTGGTTTAAAGTGAGAAGGGATCTTGCAACCACTTAGCCCAGACTGATCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR-3UTR CCA 90 bp | GTCTTAAGAGTATCTGGAAAGGGAAGCTTTACAGATATGTTTCCTATAAACCTGATCTGGACGTTACCCTaGGGAAACAGGAAAGGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: VLRVSGKGSFTDMFPINLIWTLP*GNRKGW Trigger: CCAGCCTTTCCTGTTTCCCCAGGGTAACGTCCAGAT...CAGGTTTATAGGAAACATATCTGTAAAGCTTCCCTTTCCAGATACTCTTAAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGGGCAATCTAGGCAACATAGTAAGAGCCTGTCTACTGACAATAAGCCATGTTCATTACACAAAGTCCTaGCCTATGAGTTCATACCAC | + |
|
Preference number: 2 (lower is better) Translates to: EGNLGNIVRACLLTISHVHYTKS*PMSSYH Trigger: GTGGTATGAACTCATAGGCCAGGACTTTGTGTAATG...AACATGGCTTATTGTCAGTAGACAGGCTCTTACTATGTTGCCTAGATTGCCCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCCACATTTTGTATGCAGACTCCAGTAATGAGTTAGTACAGAGTAGTGATAGGGCATGCATGCATATGTaGCATAACCCCCAGATACAC | + |
|
Preference number: 2 (lower is better) Translates to: CHILYADSSNELVQSSDRACMHM*HNPQIH Trigger: GTGTATCTGGGGGTTATGCCACATATGCATGCATGC...CCTATCACTACTCTGTACTAACTCATTACTGGAGTCTGCATACAAAATGTGGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTCTGCTCACGCGTGTACTGTTGCTCATGTTTTTACAATTGGTAGTCATGAAAGCACCACAAAGTACCTaGTACTTTCAGAGGCCAGAT | + |
|
Preference number: 2 (lower is better) Translates to: CLLTRVLLLMFLQLVVMKAPQST*YFQRPD Trigger: ATCTGGCCTCTGAAAGTACCAGGTACTTTGTGGTGC...TTTCATGACTACCAATTGTAAAAACATGAGCAACAGTACACGCGTGAGCAGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTTATTGGGAGGGCTGGTGTACTCAAGAGTTGAGTGTAAGACTCAGCAATCATCAAACTCGCTTTGTCTaGTACAGAACAAAGAGACAC | + |
|
Preference number: 2 (lower is better) Translates to: CYWEGWCTQELSVRLSNHQTRFV*YRTKRH Trigger: GTGTCTCTTTGTTCTGTACCAGACAAAGCGAGTTTG...ATGATTGCTGAGTCTTACACTCAACTCTTGAGTACACCAGCCCTCCCAATAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR-3UTR TCA 90 bp | ATTAATACAACTATTCAGTCCTGCAATACTGGGAAGGCGGAATGTATCTGGCACATTGTACAGGTGGCTTaGACACTTAAAGTTCTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: INTTIQSCNTGKAECIWHIVQVA*TLKVLS Trigger: GGACAGAACTTTAAGTGTTCAAGCCACCTGTACAAT...GTGCCAGATACATTCCGCCTTCCCAGTATTGCAGGACTGAATAGTTGTATTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGGGCAATCTAGGCAACATAGTAAGAGCCTGTCTACTGACAATAAGCCATGTTTGCCAAGAGAATATTTaGATTCCAGGTATGGCCTTA | + |
|
Preference number: 2 (lower is better) Translates to: EGNLGNIVRACLLTISHVCQENI*IPGMAL Trigger: TAAGGCCATACCTGGAATTCAAATATTCTCTTGGCA...AACATGGCTTATTGTCAGTAGACAGGCTCTTACTATGTTGCCTAGATTGCCCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGGGCAATCTAGGCAACATAGTAAGAGCCTGTCTACTGACAATAAGCCATGTTGTTGGTGGCTATATATaGAGACAAGTGCTAATTAGC | + |
|
Preference number: 2 (lower is better) Translates to: EGNLGNIVRACLLTISHVVGGYI*RQVLIS Trigger: GCTAATTAGCACTTGTCTTCATATATAGCCACCAAC...AACATGGCTTATTGTCAGTAGACAGGCTCTTACTATGTTGCCTAGATTGCCCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGGGCAATCTAGGCAACATAGTAAGAGCCTGTCTACTGACAATAAGCCATGTTAAAACGTCTTGTGACTaGCACAATAATGAAGGACTG | + |
|
Preference number: 2 (lower is better) Translates to: EGNLGNIVRACLLTISHVKTSCD*HNNEGL Trigger: CAGTCCTTCATTATTGTGTCAGTCACAAGACGTTTT...AACATGGCTTATTGTCAGTAGACAGGCTCTTACTATGTTGCCTAGATTGCCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTCTGCTCACGCGTGTACTGTTGCTCATGTTTTTACAATTGGTAGTCATGAAACCTTGGACAAGGCTTTaGCAAAGGCTGAAAAAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: CLLTRVLLLMFLQLVVMKPWTRL*QRLKKE Trigger: TTCCTTTTTCAGCCTTTGCCAAAGCCTTGTCCAAGG...TTTCATGACTACCAATTGTAAAAACATGAGCAACAGTACACGCGTGAGCAGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTCTGCTCACGCGTGTACTGTTGCTCATGTTTTTACAATTGGTAGTCATGAAACAGAAAGGATGTTATTaGGAGGGCTGGTGTACTCAA | + |
|
Preference number: 2 (lower is better) Translates to: CLLTRVLLLMFLQLVVMKQKGCY*EGWCTQ Trigger: TTGAGTACACCAGCCCTCCCAATAACATCCTTTCTG...TTTCATGACTACCAATTGTAAAAACATGAGCAACAGTACACGCGTGAGCAGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR CAA 90 bp | CTACACTGTCTGCTCACGCGTGTACTGTTGCTCATGTTTTTACAATaGGTAGTCATGAAAGTGTTTTCCTTCAGAAAGGATGTTATTGGG | + |
|
Preference number: 2 (lower is better) Translates to: LHCLLTRVLLLMFLQ*VVMKVFSFRKDVIG Trigger: CCCAATAACATCCTTTCTGAAGGAAAACACTTTCATGACTACCAATTGTAAAAACATGAGCAACAGTACACGCGTGAGCAGACAGTGTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR CAA 90 bp | ACATGGCACTTTTCTAACTCCAGATCCAAGTGCTCTCTTCCGGCCTaGACGTGCACATACATACTTACATACATTTCTGCAAAATATTCT | + |
|
Preference number: 2 (lower is better) Translates to: TWHFSNSRSKCSLPA*TCTYILTYISAKYS Trigger: AGAATATTTTGCAGAAATGTATGTAAGTATGTATGTGCACGTCAAGGCCGGAAGAGAGCACTTGGATCTGGAGTTAGAAAAGTGCCATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGGGCAATCTAGGCAACATAGTAAGAGCCTGTCTACTGACAATAAGCCATGTTACTATAACTATATGCTaGAATAAGCCCTTTCCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: EGNLGNIVRACLLTISHVTITIC*NKPFPP Trigger: TGGAGGAAAGGGCTTATTTCAGCATATAGTTATAGT...AACATGGCTTATTGTCAGTAGACAGGCTCTTACTATGTTGCCTAGATTGCCCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTCTGCTCACGCGTGTACTGTTGCTCATGTTTTTACAATTGGTAGTCATGAAAACACCAAGACAAACCTaGACAGAGCTGTTGTATCAT | + |
|
Preference number: 2 (lower is better) Translates to: CLLTRVLLLMFLQLVVMKTPRQT*TELLYH Trigger: ATGATACAACAGCTCTGTTCAGGTTTGTCTTGGTGT...TTTCATGACTACCAATTGTAAAAACATGAGCAACAGTACACGCGTGAGCAGACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTCTGCTCACGCGTGTACTGTTGCTCATGTTTTTACAATTGGTAGTCATGAAAACCAGGGCAATGGTATaGATAGTACATAGACACCAA | + |
|
Preference number: 2 (lower is better) Translates to: CLLTRVLLLMFLQLVVMKTRAMV*IVHRHQ Trigger: TTGGTGTCTATGTACTATTCATACCATTGCCCTGGT...TTTCATGACTACCAATTGTAAAAACATGAGCAACAGTACACGCGTGAGCAGACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR-3UTR GCA 90 bp | GTGCTCTCTTCCGGCCTTGACGTGCACATACATACTTACATACATTTCTGCAAACCCAAAGGACGGATTTaGACGTTAAAAATTAGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: VLSSGLDVHIHTYIHFCKPKGRI*TLKIRE Trigger: TTCTCTAATTTTTAACGTGCAAATCCGTCCTTTGGG...TTTGCAGAAATGTATGTAAGTATGTATGTGCACGTCAAGGCCGGAAGAGAGCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR-3UTR CCA 90 bp | GTCTTAAGAGTATCTGGAAAGGGAAGCTTTACAGATATGTTTCCTATAAACCTGTCAGTCCTGCAATACTaGGAAGGCGGAATGTATCTG | + |
|
Preference number: 2 (lower is better) Translates to: VLRVSGKGSFTDMFPINLSVLQY*EGGMYL Trigger: CAGATACATTCCGCCTTCCCAGTATTGCAGGACTGA...CAGGTTTATAGGAAACATATCTGTAAAGCTTCCCTTTCCAGATACTCTTAAGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGGGCAATCTAGGCAACATAGTAAGAGCCTGTCTACTGACAATAAGCCATGTTAGTCTTAAGAGTATCTaGAAAGGGAAGCTTTACAGA | + |
|
Preference number: 2 (lower is better) Translates to: EGNLGNIVRACLLTISHVSLKSI*KGKLYR Trigger: TCTGTAAAGCTTCCCTTTCCAGATACTCTTAAGACT...AACATGGCTTATTGTCAGTAGACAGGCTCTTACTATGTTGCCTAGATTGCCCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR-3UTR GCA 90 bp | GTCTTAAGAGTATCTGGAAAGGGAAGCTTTACAGATATGTTTCCTATAAACCTGTCTGGGCTAAGTGGTTaGAAGATCCCTTCTCACTTT | + |
|
Preference number: 2 (lower is better) Translates to: VLRVSGKGSFTDMFPINLSGLSG*KIPSHF Trigger: AAAGTGAGAAGGGATCTTGCAACCACTTAGCCCAGA...CAGGTTTATAGGAAACATATCTGTAAAGCTTCCCTTTCCAGATACTCTTAAGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR-3UTR GCA 90 bp | TGCCACATTTTGTATGCAGACTCCAGTAATGAGTTAGTACAGAGTAGTGATAGGATGAGTGCTGCCATGTaGATGTGTGTACACAATAAT | + |
|
Preference number: 2 (lower is better) Translates to: CHILYADSSNELVQSSDRMSAAM*MCVHNN Trigger: ATTATTGTGTACACACATGCACATGGCAGCACTCAT...CCTATCACTACTCTGTACTAACTCATTACTGGAGTCTGCATACAAAATGTGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR-3UTR CCA 90 bp | GTGCTCTCTTCCGGCCTTGACGTGCACATACATACTTACATACATTTCTGCAAACTGATTACACATACTTaGAACTGTGCAAAATGTACT | + |
|
Preference number: 2 (lower is better) Translates to: VLSSGLDVHIHTYIHFCKLITHT*NCAKCT Trigger: AGTACATTTTGCACAGTTCCAAGTATGTGTAATCAG...TTTGCAGAAATGTATGTAAGTATGTATGTGCACGTCAAGGCCGGAAGAGAGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR CAA 90 bp | TGTGCAGAGTACTCTGAAGAAAGAAAAGTATGTACAGCCATTGTTTaGATTAATACAACTATTCAGTCCTGCAATACTGGGAAGGCGGAA | + |
|
Preference number: 2 (lower is better) Translates to: CAEYSEERKVCTAIV*INTTIQSCNTGKAE Trigger: TTCCGCCTTCCCAGTATTGCAGGACTGAATAGTTGTATTAATCAAAACAATGGCTGTACATACTTTTCTTTCTTCAGAGTACTCTGCACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTCTGCTCACGCGTGTACTGTTGCTCATGTTTTTACAATTGGTAGTCATGAAACAATGTAAGTATAGCTaGTACACTGACTGCAAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: CLLTRVLLLMFLQLVVMKQCKYS*YTDCKS Trigger: ACTTTTGCAGTCAGTGTATCAGCTATACTTACATTG...TTTCATGACTACCAATTGTAAAAACATGAGCAACAGTACACGCGTGAGCAGACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCCACATTTTGTATGCAGACTCCAGTAATGAGTTAGTACAGAGTAGTGATAGGGGGATTAAACCCATCTaGATTTCTGGTGAAAATATT | + |
|
Preference number: 2 (lower is better) Translates to: CHILYADSSNELVQSSDRGIKPI*ISGENI Trigger: AATATTTTCACCAGAAATCCAGATGGGTTTAATCCC...CCTATCACTACTCTGTACTAACTCATTACTGGAGTCTGCATACAAAATGTGGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTCTGCTCACGCGTGTACTGTTGCTCATGTTTTTACAATTGGTAGTCATGAAATTTATGTATTGGGTCTaGGAAAAGAGTAGTACAGAT | + |
|
Preference number: 2 (lower is better) Translates to: CLLTRVLLLMFLQLVVMKFMYWV*EKSSTD Trigger: ATCTGTACTACTCTTTTCCCAGACCCAATACATAAA...TTTCATGACTACCAATTGTAAAAACATGAGCAACAGTACACGCGTGAGCAGACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR CAA 90 bp | TTGACTAGAGGAAGCTATCTAATTAGAACTAGCTTCCACAGACGTTaGAGTTGTGAAATTATGGGATCATCCCATAATTATTGTGTTGTG | + |
|
Preference number: 2 (lower is better) Translates to: LTRGSYLIRTSFHRR*SCEIMGSSHNYCVV Trigger: CACAACACAATAATTATGGGATGATCCCATAATTTCACAACTCAAACGTCTGTGGAAGCTAGTTCTAATTAGATAGCTTCCTCTAGTCAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR CAA 90 bp | CTGAGTAAATTTATGTATTGGGTCTGGGAAAAGAGTAGTACAGATTaGCAAAAAGATGAAGGTCTGAATTTATATTGGAAGATGCCGGCA | + |
|
Preference number: 2 (lower is better) Translates to: LSKFMYWVWEKSSTD*QKDEGLNLYWKMPA Trigger: TGCCGGCATCTTCCAATATAAATTCAGACCTTCATCTTTTTGCAAATCTGTACTACTCTTTTCCCAGACCCAATACATAAATTTACTCAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR CCA 72 bp | CGAGCATGGCTGCAGCCGCCCCTGGTCCTGTGGAGTTaGGCTTCGCCGAGGAGGCACCGGCCTGGAGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: RAWLQPPLVLWS*ASPRRHRPGGC Trigger: GCAGCCTCCAGGCCGGTGCCTCCTCGGCGAAGCCCAACTCCACAGGACCAGGGGCGGCTGCAGCCATGCTCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR CCA 72 bp | CTGCTGCGAGCATGGCTGCAGCCGCCCCTGGTCCTGTaGAGTTGGGCTTCGCCGAGGAGGCACCGGCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LLRAWLQPPLVL*SWASPRRHRPG Trigger: TCCAGGCCGGTGCCTCCTCGGCGAAGCCCAACTCCACAGGACCAGGGGCGGCTGCAGCCATGCTCGCAGCAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR GCA 72 bp | TCCGGCCTGGTGGCAGAGTCCTGCTGCGAGCATGGCTaGAGCCGCCCCTGGTCCTGTGGAGTTGGGCTTCGC | + |
|
Preference number: 3 (lower is better) Translates to: SGLVAESCCEHG*SRPWSCGVGLR Trigger: GCGAAGCCCAACTCCACAGGACCAGGGGCGGCTGCAGCCATGCTCGCAGCAGGACTCTGCCACCAGGCCGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR CCA 72 bp | GCAGAGTCCTGCTGCGAGCATGGCTGCAGCCGCCCCTaGTCCTGTGGAGTTGGGCTTCGCCGAGGAGGCACC | + |
|
Preference number: 3 (lower is better) Translates to: AESCCEHGCSRP*SCGVGLRRGGT Trigger: GGTGCCTCCTCGGCGAAGCCCAACTCCACAGGACCAGGGGCGGCTGCAGCCATGCTCGCAGCAGGACTCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR TCA 72 bp | ATAGGGTTACCTCCAGTCCGGTCCCAGCTCGAGATCTaGCCCCGCCTCCCGCCTTCCGGCCTAACACGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: IGLPPVRSQLEI*PRLPPSGLTRD Trigger: GTCACGTGTTAGGCCGGAAGGCGGGAGGCGGGGTCAGATCTCGAGCTGGGACCGGACTGGAGGTAACCCTAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR CCA 72 bp | CCAGCCCTGCTCCCTTACCCACCCACTCCTGATTCTTaGCCCTGGTGTTCCCCTGTACTGGGGCATATAAAG | + |
|
Preference number: 3 (lower is better) Translates to: PALLPYPPTPDS*PWCSPVLGHIK Trigger: CTTTATATGCCCCAGTACAGGGGAACACCAGGGCCAAGAATCAGGAGTGGGTGGGTAAGGGAGCAGGGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR TCA 72 bp | CGCACAACTACCTGTAATAGCCAGCTCCAGAGGATCTaGTGCCCTTTTTCTGGCCCCTGTGGGCATGCATGC | + |
|
Preference number: 3 (lower is better) Translates to: RTTTCNSQLQRI*CPFSGPCGHAC Trigger: GCATGCATGCCCACAGGGGCCAGAAAAAGGGCATCAGATCCTCTGGAGCTGGCTATTACAGGTAGTTGTGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR CCA 72 bp | AGTTGTTACTCAGCTCGTAGTGGTGGTGCCTATCTGTaGTCCTGGCACTCGAGTGCCAGCTGCAGGAGGATT | + |
|
Preference number: 3 (lower is better) Translates to: SCYSARSGGAYL*SWHSSASCRRI Trigger: AATCCTCCTGCAGCTGGCACTCGAGTGCCAGGACCACAGATAGGCACCACCACTACGAGCTGAGTAACAACT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR TCA 72 bp | AGTGCTGAGAATGCCCCCACTTCCCTCACTCCAACCTaGGGATCTACAACCGACACCCTAATCTCAGAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: SAENAPTSLTPT*GSTTDTLISEV Trigger: GACCTCTGAGATTAGGGTGTCGGTTGTAGATCCTCAGGTTGGAGTGAGGGAAGTGGGGGCATTCTCAGCACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR GCA 72 bp | GTTATCTCAGACAGGACCCTAGTAACCCTAAAGGCCTaGTGCCACCATCAGGCATACTGGAGAGTGCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: VISDRTLVTLKA*CHHQAYWRVQA Trigger: TGCCTGCACTCTCCAGTATGCCTGATGGTGGCAGCAGGCCTTTAGGGTTACTAGGGTCCTGTCTGAGATAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR GCA 72 bp | CCTTCTGAAACAGAAGCTTTGGGTACGGAATGTGTGTaGCTCCAGCTCAAGTCTGGAGCCCATCTCTGTCGG | + |
|
Preference number: 3 (lower is better) Translates to: PSETEALGTECV*LQLKSGAHLCR Trigger: CCGACAGAGATGGGCTCCAGACTTGAGCTGGAGGCACACACATTCCGTACCCAAAGCTTCTGTTTCAGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR CCA 72 bp | CTGCTCCCTTACCCACCCACTCCTGATTCTTGGCCCTaGTGTTCCCCTGTACTGGGGCATATAAAGTTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: LLPYPPTPDSWP*CSPVLGHIKFA Trigger: TGCAAACTTTATATGCCCCAGTACAGGGGAACACCAGGGCCAAGAATCAGGAGTGGGTGGGTAAGGGAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR TCA 72 bp | CTTTGGGGCTGTGTCTTTGTTGGCCCACACAGGTGCTaGTCATCAGTCCAGCATTCACCCTGCCTCAAGATT | + |
|
Preference number: 3 (lower is better) Translates to: LWGCVFVGPHRC*SSVQHSPCLKI Trigger: AATCTTGAGGCAGGGTGAATGCTGGACTGATGATCAGCACCTGTGTGGGCCAACAAAGACACAGCCCCAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR TCA 72 bp | CCCATCTCTGTCGGGTTTGTGGTTGCTTGGCCCCTATaGCATGCTCTAGGTGCAAACAGGCACATTACTGCA | + |
|
Preference number: 3 (lower is better) Translates to: PISVGFVVAWPL*HALGANRHITA Trigger: TGCAGTAATGTGCCTGTTTGCACCTAGAGCATGTCATAGGGGCCAAGCAACCACAAACCCGACAGAGATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR TCA 72 bp | CTCCTCCACCCCAGTTTTGAACATCCTTTAACTGCATaGGGACAGGTTTCAAGGGTCTGTGTGGGTTCGCCC | + |
|
Preference number: 3 (lower is better) Translates to: LLHPSFEHPLTA*GQVSRVCVGSP Trigger: GGGCGAACCCACACAGACCCTTGAAACCTGTCCTCATGCAGTTAAAGGATGTTCAAAACTGGGGTGGAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR GCA 72 bp | CTCTGTCGGGTTTGTGGTTGCTTGGCCCCTATGACATaGTCTAGGTGCAAACAGGCACATTACTGCAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: LCRVCGCLAPMT*SRCKQAHYCSK Trigger: CTTGCTGCAGTAATGTGCCTGTTTGCACCTAGAGCATGTCATAGGGGCCAAGCAACCACAAACCCGACAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR CCA 72 bp | TCCTCTAGAGTCCATGCTTTGGGGCTGTGTCTTTGTTaGCCCACACAGGTGCTGATCATCAGTCCAGCATTC | + |
|
Preference number: 3 (lower is better) Translates to: SSRVHALGLCLC*PTQVLIISPAF Trigger: GAATGCTGGACTGATGATCAGCACCTGTGTGGGCCAACAAAGACACAGCCCCAAAGCATGGACTCTAGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGTGCCTCCAGCTCAAGTCTGGAGCCCATCTCTGTCGGGTTTGTGGTTGCTTGAGTTTATGGCCTCATTaGCAGGAAGAATGGTACCCA | + |
|
Preference number: 3 (lower is better) Translates to: VCLQLKSGAHLCRVCGCLSLWPH*QEEWYP Trigger: TGGGTACCATTCTTCCTGCAAATGAGGCCATAAACT...CAAGCAACCACAAACCCGACAGAGATGGGCTCCAGACTTGAGCTGGAGGCACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGTGCCTCCAGCTCAAGTCTGGAGCCCATCTCTGTCGGGTTTGTGGTTGCTTGGTGCCAAGAGAATATTaGAATTCCAGGTATGGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: VCLQLKSGAHLCRVCGCLVPREY*NSRYGL Trigger: AAGGCCATACCTGGAATTCAAATATTCTCTTGGCAC...CAAGCAACCACAAACCCGACAGAGATGGGCTCCAGACTTGAGCTGGAGGCACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR TCA 72 bp | GGACACACAGTGTCACTTCATGCTGCCACCTGTAACTaGGTGTCCTCACCAACTGTACCATCAGTGGTACCA | + |
|
Preference number: 3 (lower is better) Translates to: GHTVSLHAATCN*VSSPTVPSVVP Trigger: TGGTACCACTGATGGTACAGTTGGTGAGGACACTCAGTTACAGGTGGCAGCATGAAGTGACACTGTGTGTCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| 3UTR GCA 72 bp | GGCTGGAGAGATGGCTCAGTGGTTAAAAGCACTGACTaGTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: GWRDGSVVKSTD*SSRGPEFNSQQ Trigger: TTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTTTTAACCACTGAGCCATCTCTCCAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR CCA 72 bp | TCTACTCCTATGAGCCCCCTTCTGAAACAGAAGCTTTaGGTACGGAATGTGTGTGCCTCCAGCTCAAGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: STPMSPLLKQKL*VRNVCASSSSL Trigger: CAGACTTGAGCTGGAGGCACACACATTCCGTACCCAAAGCTTCTGTTTCAGAAGGGGGCTCATAGGAGTAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTGATCAGTCTGGGCTAAGTGGTTGCAAGATCCCTTCTCACTTTAAACCACTGCGGGGAGAGGGAATCTaGAGAACAGGCTCTGTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: PDQSGLSGCKIPSHFKPLRGEGI*RTGSVR Trigger: TCTTACAGAGCCTGTTCTCAAGATTCCCTCTCCCCG...CAGTGGTTTAAAGTGAGAAGGGATCTTGCAACCACTTAGCCCAGACTGATCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGGGCAATCTAGGCAACATAGTAAGAGCCTGTCTACTGACAATAAGCCATGTTGGGGCTGTGTCTTTGTaGGCCCACACAGGTGCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: EGNLGNIVRACLLTISHVGAVSL*AHTGAD Trigger: ATCAGCACCTGTGTGGGCCAACAAAGACACAGCCCC...AACATGGCTTATTGTCAGTAGACAGGCTCTTACTATGTTGCCTAGATTGCCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR CCA 72 bp | TTATTGTGTACACACATGCACATGGCAGCACTCGTGTaGAAGTCAACTTCTTCCACTGTGTGGGTCCCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LLCTHMHMAALV*KSTSSTVWVPR Trigger: CCTTGGGACCCACACAGTGGAAGAAGTTGACTTCCACACGAGTGCTGCCATGTGCATGTGTGTACACAATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGTGCCTCCAGCTCAAGTCTGGAGCCCATCTCTGTCGGGTTTGTGGTTGCTTGGTTACCCTAGCATTCTaGTTCACTCTGAATTTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: VCLQLKSGAHLCRVCGCLVTLAF*FTLNFK Trigger: CTTAAAATTCAGAGTGAACAAGAATGCTAGGGTAAC...CAAGCAACCACAAACCCGACAGAGATGGGCTCCAGACTTGAGCTGGAGGCACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGTGCCTCCAGCTCAAGTCTGGAGCCCATCTCTGTCGGGTTTGTGGTTGCTTGAAATTTTGCCTGAGGTaGTGGAAATGGAGGATTATT | + |
|
Preference number: 3 (lower is better) Translates to: VCLQLKSGAHLCRVCGCLKFCLR*WKWRII Trigger: AATAATCCTCCATTTCCACAACCTCAGGCAAAATTT...CAAGCAACCACAAACCCGACAGAGATGGGCTCCAGACTTGAGCTGGAGGCACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR TCA 72 bp | CAATCTTGGAAGTCCACAGATTCAAGGCTAAGTGCCTaGTCAGTCTGGGCTAAGTGGTTGCAAGATCCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: QSWKSTDSRLSA*SVWAKWLQDPF Trigger: GAAGGGATCTTGCAACCACTTAGCCCAGACTGATCAGGCACTTAGCCTTGAATCTGTGGACTTCCAAGATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR CCA 72 bp | AATATAGCGGAAGATGAAGACACCCACTCACTAATCTaGACGTTACCCTGGGGAAACAGGAAAGGCTGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: NIAEDEDTHSLI*TLPWGNRKGWE Trigger: TTCCCAGCCTTTCCTGTTTCCCCAGGGTAACGTCCAGATTAGTGAGTGGGTGTCTTCATCTTCCGCTATATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR CCA 72 bp | CTGAGAATCAAACCTGGGTCTTCTGCAAAAATAGCTTaGGCTCAGTTAATCTCCCAGCCAGCTCTAGCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LRIKPGSSAKIA*AQLISQPALAQ Trigger: CTGAGCTAGAGCTGGCTGGGAGATTAACTGAGCCCAAGCTATTTTTGCAGAAGACCCAGGTTTGATTCTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGGGCAATCTAGGCAACATAGTAAGAGCCTGTCTACTGACAATAAGCCATGTTATTCCCAGCAACTACTaGGTGGCTCACAACCATCTG | + |
|
Preference number: 3 (lower is better) Translates to: EGNLGNIVRACLLTISHVIPSNY*VAHNHL Trigger: CAGATGGTTGTGAGCCACCAAGTAGTTGCTGGGAAT...AACATGGCTTATTGTCAGTAGACAGGCTCTTACTATGTTGCCTAGATTGCCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR TCA 72 bp | TCAGACAGAGGTGTGAGTGTGGCTTCACATCCCAAATaGCCAGCAATGCTGTCTGCTCAGAATGTATTACAG | + |
|
Preference number: 3 (lower is better) Translates to: SDRGVSVASHPK*PAMLSAQNVLQ Trigger: CTGTAATACATTCTGAGCAGACAGCATTGCTGGTCATTTGGGATGTGAAGCCACACTCACACCTCTGTCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR TCA 72 bp | GAGTTTGATCCTTGGGACCCACACAGTAGAAGAAGTTaGCTTCCACACTTACACTTCAACATGAGTGCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: EFDPWDPHSRRS*LPHLHFNMSAA Trigger: GGCAGCACTCATGTTGAAGTGTAAGTGTGGAAGTCAACTTCTTCTACTGTGTGGGTCCCAAGGATCAAACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR GCA 72 bp | AGCTGGGTGAATACTGAGAATCAAACCTGGGTCTTCTaGAAAAATAGCTTGGGCTCAGTTAATCTCCCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: SWVNTENQTWVF*KNSLGSVNLPA Trigger: GGCTGGGAGATTAACTGAGCCCAAGCTATTTTTGCAGAAGACCCAGGTTTGATTCTCAGTATTCACCCAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR TCA 72 bp | ACTGTATCCGGTCATCTTTCTCCTCCACCCCAGTTTTaGACATCCTTTAACTGCATGAGGACAGGTTTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: TVSGHLSPPPQF*TSFNCMRTGFK Trigger: CTTGAAACCTGTCCTCATGCAGTTAAAGGATGTTCAAAACTGGGGTGGAGGAGAAAGATGACCGGATACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCCACATTTTGTATGCAGACTCCAGTAATGAGTTAGTACAGAGTAGTGATAGGAAAAGATATTCCAGATaGCCCGTGTGGTGCCAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: CHILYADSSNELVQSSDRKRYSR*PVWCQE Trigger: CTCTTGGCACCACACGGGCAATCTGGAATATCTTTT...CCTATCACTACTCTGTACTAACTCATTACTGGAGTCTGCATACAAAATGTGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGCTCTCTTCCGGCCTTGACGTGCACATACATACTTACATACATTTCTGCAAAAGGTCTGAATTTATATaGGAAGATGCCGGCAACTAC | + |
|
Preference number: 3 (lower is better) Translates to: VLSSGLDVHIHTYIHFCKRSEFI*EDAGNY Trigger: GTAGTTGCCGGCATCTTCCAATATAAATTCAGACCT...TTTGCAGAAATGTATGTAAGTATGTATGTGCACGTCAAGGCCGGAAGAGAGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR TCA 72 bp | TTTCTAACTCCAGATCCAAGTGCTCTCTTCCGGCCTTaGCGTGCACATACATACTTACATACATTTCTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: FLTPDPSALFRP*RAHTYLHTFLQ Trigger: TTGCAGAAATGTATGTAAGTATGTATGTGCACGTCAAGGCCGGAAGAGAGCACTTGGATCTGGAGTTAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR CCA 72 bp | CTATGTACGTATTCAAAACACACATACAAGAATACCTaGTCCAACACTGTACAGCACTGTGCACTGCCATCA | + |
|
Preference number: 3 (lower is better) Translates to: LCTYSKHTYKNT*SNTVQHCALPS Trigger: TGATGGCAGTGCACAGTGCTGTACAGTGTTGGACCAGGTATTCTTGTATGTGTGTTTTGAATACGTACATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR CCA 72 bp | AGTGTTTTCCTTCAGAAAGGATGTTATTGGGAGGGCTaGTGTACTCAAGAGTTGAGTGTAAGACTCAGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: SVFLQKGCYWEG*CTQELSVRLSN Trigger: ATTGCTGAGTCTTACACTCAACTCTTGAGTACACCAGCCCTCCCAATAACATCCTTTCTGAAGGAAAACACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR CCA 72 bp | CTACATATGCAGCTAGAGACACGAGCTCTGGGGTACTaGTTAGTACAACCAGCTTTATTAACAGGTAGTATT | + |
|
Preference number: 3 (lower is better) Translates to: LHMQLETRALGY*LVQPALLTGSI Trigger: AATACTACCTGTTAATAAAGCTGGTTGTACTAACCAGTACCCCAGAGCTCGTGTCTCTAGCTGCATATGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR CCA 72 bp | AGTCATGAAAGTGTTTTCCTTCAGAAAGGATGTTATTaGGAGGGCTGGTGTACTCAAGAGTTGAGTGTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: SHESVFLQKGCY*EGWCTQELSVR Trigger: TCTTACACTCAACTCTTGAGTACACCAGCCCTCCCAATAACATCCTTTCTGAAGGAAAACACTTTCATGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCCACATTTTGTATGCAGACTCCAGTAATGAGTTAGTACAGAGTAGTGATAGGAAGTCTATTTATGTTTaGCCTGAATGTGTGAGCACC | + |
|
Preference number: 3 (lower is better) Translates to: CHILYADSSNELVQSSDRKSIYV*PECVST Trigger: GGTGCTCACACATTCAGGCAAAACATAAATAGACTT...CCTATCACTACTCTGTACTAACTCATTACTGGAGTCTGCATACAAAATGTGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR TCA 72 bp | GGTGTGGGGTATTCCATAGGATACACTGCCAAGCAATaGCTAAATCTTAAAAGGTTAATGGTCTTTCCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: GVGYSIGYTAKQ*LNLKRLMVFPV Trigger: AACTGGAAAGACCATTAACCTTTTAAGATTTAGTCATTGCTTGGCAGTGTATCCTATGGAATACCCCACACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR TCA 72 bp | GTAGAAGAAGTTGACTTCCACACTTACACTTCAACATaGGTGCTGCCATGTGCATGTGTGTACACAATAATT | + |
|
Preference number: 3 (lower is better) Translates to: VEEVDFHTYTST*VLPCACVYTII Trigger: AATTATTGTGTACACACATGCACATGGCAGCACTCATGTTGAAGTGTAAGTGTGGAAGTCAACTTCTTCTAC 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR TCA 72 bp | ACTCAGGAGGTTAAAGGCAGGTTTGAAGTTCAGTTTTaGATTCAAGTCAAGCCTGAACAAATTTGTGAGACC | + |
|
Preference number: 3 (lower is better) Translates to: TQEVKGRFEVQF*IQVKPEQICET Trigger: GGTCTCACAAATTTGTTCAGGCTTGACTTGAATTCAAAACTGAACTTCAAACCTGCCTTTAACCTCCTGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR TCA 72 bp | GAAACAGGAAAGGCTGGGAAGAAAAAGACTTCCTTCTaGTTACACATACTTGGAACTGTGCAAAATGTACTT | + |
|
Preference number: 3 (lower is better) Translates to: ETGKAGKKKTSF*LHILGTVQNVL Trigger: AAGTACATTTTGCACAGTTCCAAGTATGTGTAATCAGAAGGAAGTCTTTTTCTTCCCAGCCTTTCCTGTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR TCA 72 bp | AAACAATTGAACCAACCCCATGTTGGTGGCTATATATaGAGACAAGTGCTAATTAGCTACCTTATGCCACAT | + |
|
Preference number: 3 (lower is better) Translates to: KQLNQPHVGGYI*RQVLISYLMPH Trigger: ATGTGGCATAAGGTAGCTAATTAGCACTTGTCTTCATATATAGCCACCAACATGGGGTTGGTTCAATTGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR CCA 72 bp | TGGAAATGGAGGATTATTCTGAAGTTACAGGAAGCATaGGTAAGGAGTCTGTGCATCAATTTTACAGTACTA | + |
|
Preference number: 3 (lower is better) Translates to: WKWRIILKLQEA*VRSLCINFTVL Trigger: TAGTACTGTAAAATTGATGCACAGACTCCTTACCCATGCTTCCTGTAACTTCAGAATAATCCTCCATTTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR TCA 72 bp | TCTGTAATGACATCCAATGCCCTCTTCTGGTGTCTCTaGAGAGTAACAGTGTACTCACATAAAATAAATAAA | + |
|
Preference number: 3 (lower is better) Translates to: SVMTSNALFWCL*RVTVYSHKINK Trigger: TTTATTTATTTTATGTGAGTACACTGTTACTCTTCAGAGACACCAGAAGAGGGCATTGGATGTCATTACAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR TCA 72 bp | TGTTCTCAAAATGACAGCCACCTTATCAAACCTATATaGTTCACGTTTACACACTGTACACACATAAATGTC | + |
|
Preference number: 3 (lower is better) Translates to: CSQNDSHLIKPI*FTFTHCTHINV Trigger: GACATTTATGTGTGTACAGTGTGTAAACGTGAATCATATAGGTTTGATAAGGTGGCTGTCATTTTGAGAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR TCA 72 bp | CAGATGCAATGTCTTATAATGCAATGTAAGTATAGCTaGTACACTGACTGCAAAAGTCACAAGAAAACGTAT | + |
|
Preference number: 3 (lower is better) Translates to: QMQCLIMQCKYS*YTDCKSHKKTY Trigger: ATACGTTTTCTTGTGACTTTTGCAGTCAGTGTATCAGCTATACTTACATTGCATTATAAGACATTGCATCTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR TCA 72 bp | AGTCCTCAGATCAGGGTTCTATTGGACATTCTTAGATaGGATATATTGATTTTTAGATTCTCAGGTATGGAA | + |
|
Preference number: 3 (lower is better) Translates to: SPQIRVLLDILR*DILIFRFSGME Trigger: TTCCATACCTGAGAATCTAAAAATCAATATATCTCATCTAAGAATGTCCAATAGAACCCTGATCTGAGGACT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR CAA 72 bp | GCGAGCATGGCTGCAGCCGCCCCTGGTCCTGTGGAGTaGGGCTTCGCCGAGGAGGCACCGGCCTGGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ASMAAAAPGPVE*GFAEEAPAWRL Trigger: CAGCCTCCAGGCCGGTGCCTCCTCGGCGAAGCCCAACTCCACAGGACCAGGGGCGGCTGCAGCCATGCTCGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| CDS-3UTR CCA 90 bp | GCCCAAGTAGCAGCACAGAGCAAGCAACTCACAGTAGTGCTGCAGGGTGATTTCAGTCATGGCGCCCTGTaGGGAGGCCAAGCCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AQVAAQSKQLTVVLQGDFSHGAL*GGQALS Trigger: GCTCAGGGCTTGGCCTCCCCACAGGGCGCCATGACT...GAAATCACCCTGCAGCACTACTGTGAGTTGCTTGCTCTGTGCTGCTACTTGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR CCA 90 bp | GTAGCAGCACAGAGCAAGCAACTCACAGTAGTGCTGCAGGGTGATTTCAGTGCACAAGGGGGTGGTGCCTaGCAACGGTGCAGTGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VAAQSKQLTVVLQGDFSAQGGGA*QRCSGQ Trigger: CTGACCACTGCACCGTTGCCAGGCACCACCCCCTTG...TGCACTGAAATCACCCTGCAGCACTACTGTGAGTTGCTTGCTCTGTGCTGCTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| 3UTR CAA 72 bp | AAGTCTGGAGCCCATCTCTGTCGGGTTTGTGGTTGCTaGGCCCCTATGACATGCTCTAGGTGCAAACAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KSGAHLCRVCGC*APMTCSRCKQA Trigger: TGCCTGTTTGCACCTAGAGCATGTCATAGGGGCCAAGCAACCACAAACCCGACAGAGATGGGCTCCAGACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| CDS-3UTR TCA 90 bp | GCCCAAGTAGCAGCACAGAGCAAGCAACTCACAGTAGTGCTGCAGGGTGATTTCCATAGGAGTCATTGGTaGAGGGTACAAGGGGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: AQVAAQSKQLTVVLQGDFHRSHW*RVQGGG Trigger: ACCACCCCCTTGTACCCTTCACCAATGACTCCTATG...GAAATCACCCTGCAGCACTACTGTGAGTTGCTTGCTCTGTGCTGCTACTTGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR TCA 90 bp | GATGTTGGCAAGCCCAAATCAATGTGTGGGTGGTGCCACCCCTGGGAGTATAAGCATAGGAGTCATTGGTaGAGGGTACAAGGGGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: DVGKPKSMCGWCHPWEYKHRSHW*RVQGGG Trigger: ACCACCCCCTTGTACCCTTCACCAATGACTCCTATG...CTTATACTCCCAGGGGTGGCACCACCCACACATTGATTTGGGCTTGCCAACATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| CDS-3UTR GCA 90 bp | GCCCAAGTAGCAGCACAGAGCAAGCAACTCACAGTAGTGCTGCAGGGTGATTTCGCAGTTGCTACTGCCTaGTGTTGTTGCTGCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AQVAAQSKQLTVVLQGDFAVATA*CCCCCC Trigger: ACAGCAGCAGCAACAACAGCAGGCAGTAGCAACTGC...GAAATCACCCTGCAGCACTACTGTGAGTTGCTTGCTCTGTGCTGCTACTTGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR CCA 90 bp | GCCCAAGTAGCAGCACAGAGCAAGCAACTCACAGTAGTGCTGCAGGGTGATTTCGCCCTGAGCATAAGGTaGAAGGCTGTTGTTCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: AQVAAQSKQLTVVLQGDFALSIR*KAVVLV Trigger: GACCAGAACAACAGCCTTCCACCTTATGCTCAGGGC...GAAATCACCCTGCAGCACTACTGTGAGTTGCTTGCTCTGTGCTGCTACTTGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| 3UTR CAA 72 bp | GGGTCAGTGCCTGTGGCTGGACCTGATAACCTGAGTTaGATCCTTGGGACCCACACAGTAGAAGAAGTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GSVPVAGPDNLS*ILGTHTVEEVD Trigger: GTCAACTTCTTCTACTGTGTGGGTCCCAAGGATCAAACTCAGGTTATCAGGTCCAGCCACAGGCACTGACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| CDS-3UTR TCA 90 bp | GCCCAAGTAGCAGCACAGAGCAAGCAACTCACAGTAGTGCTGCAGGGTGATTTCGCAGTGGTCAGAGTTTaGGAATGGAAGAGTTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AQVAAQSKQLTVVLQGDFAVVRV*EWKSCG Trigger: CCCACAACTCTTCCATTCTCAAACTCTGACCACTGC...GAAATCACCCTGCAGCACTACTGTGAGTTGCTTGCTCTGTGCTGCTACTTGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR TCA 90 bp | GTAGCAGCACAGAGCAAGCAACTCACAGTAGTGCTGCAGGGTGATTTCAGTGCACATAGGAGTCATTGGTaGAGGGTACAAGGGGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VAAQSKQLTVVLQGDFSAHRSHW*RVQGGG Trigger: ACCACCCCCTTGTACCCTTCACCAATGACTCCTATG...TGCACTGAAATCACCCTGCAGCACTACTGTGAGTTGCTTGCTCTGTGCTGCTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR GCA 90 bp | GCCCAAGTAGCAGCACAGAGCAAGCAACTCACAGTAGTGCTGCAGGGTGATTTCTGCTGCTGTTGCTGTTaGTGCTGCTGTCTTTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: AQVAAQSKQLTVVLQGDFCCCCC*CCCLCC Trigger: GCAACAAAGACAGCAGCAGCAACAGCAACAGCAGCA...GAAATCACCCTGCAGCACTACTGTGAGTTGCTTGCTCTGTGCTGCTACTTGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR GCA 90 bp | GTAGCAGCACAGAGCAAGCAACTCACAGTAGTGCTGCAGGGTGATTTCAGTGCAGCAGTTGCTACTGCCTaGTGTTGTTGCTGCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VAAQSKQLTVVLQGDFSAAVATA*CCCCCC Trigger: ACAGCAGCAGCAACAACAGCAGGCAGTAGCAACTGC...TGCACTGAAATCACCCTGCAGCACTACTGTGAGTTGCTTGCTCTGTGCTGCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR CCA 90 bp | ATTAATACAACTATTCAGTCCTGCAATACTGGGAAGGCGGAATGTATCTGGCACCAAGGGGGTGGTGCCTaGCAACGGTGCAGTGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: INTTIQSCNTGKAECIWHQGGGA*QRCSGQ Trigger: CTGACCACTGCACCGTTGCCAGGCACCACCCCCTTG...GTGCCAGATACATTCCGCCTTCCCAGTATTGCAGGACTGAATAGTTGTATTAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR CCA 90 bp | GTAGCAGCACAGAGCAAGCAACTCACAGTAGTGCTGCAGGGTGATTTCAGTGCACTGGCTCATAGCTCTTaGCTCCTGTGCACACCATTT | + |
|
Preference number: 4 (lower is better) Translates to: VAAQSKQLTVVLQGDFSALAHSS*LLCTPF Trigger: AAATGGTGTGCACAGGAGCCAAGAGCTATGAGCCAG...TGCACTGAAATCACCCTGCAGCACTACTGTGAGTTGCTTGCTCTGTGCTGCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118001.8 |
||
| 3UTR CAA 72 bp | ATACATCCTTTGGCTACTTCCTCTAGAGTCCATGCTTaGGGGCTGTGTCTTTGTTGGCCCACACAGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IHPLATSSRVHA*GLCLCWPTQVL Trigger: CAGCACCTGTGTGGGCCAACAAAGACACAGCCCCAAAGCATGGACTCTAGAGGAAGTAGCCAAAGGATGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| CDS-3UTR GCA 90 bp | GTAGCAGCACAGAGCAAGCAACTCACAGTAGTGCTGCAGGGTGATTTCAGTGCATGCTGTTGCTGTTGCTaGTGCTGTCTTTGTTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VAAQSKQLTVVLQGDFSACCCCC*CCLCCS Trigger: AGAGCAACAAAGACAGCAGCAGCAACAGCAACAGCA...TGCACTGAAATCACCCTGCAGCACTACTGTGAGTTGCTTGCTCTGTGCTGCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR GCA 90 bp | GTCCAATTGTACAGGTGGCTTGAACACTTAAAGTTCTGTCCCTTAAACCAACAAGGTACAAGGGGGTGGTaGCTGGCAACGGTGCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VQLYRWLEHLKFCPLNQQGTRGW*LATVQW Trigger: CCACTGCACCGTTGCCAGGCACCACCCCCTTGTACC...TTGTTGGTTTAAGGGACAGAACTTTAAGTGTTCAAGCCACCTGTACAATTGGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR GCA 90 bp | TGCCACATTTTGTATGCAGACTCCAGTAATGAGTTAGTACAGAGTAGTGATAGGGGTACAAGGGGGTGGTaGCTGGCAACGGTGCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CHILYADSSNELVQSSDRGTRGW*LATVQW Trigger: CCACTGCACCGTTGCCAGGCACCACCCCCTTGTACC...CCTATCACTACTCTGTACTAACTCATTACTGGAGTCTGCATACAAAATGTGGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| CDS-3UTR CCA 90 bp | CTTGAACACTTAAAGTTCTGTCCCTTAAACCAACAATCACCAACAGCAGTGTTTAGTCATGGCGCCCTGTaGGGAGGCCAAGCCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LEHLKFCPLNQQSPTAVFSHGAL*GGQALS Trigger: GCTCAGGGCTTGGCCTCCCCACAGGGCGCCATGACT...AAACACTGCTGTTGGTGATTGTTGGTTTAAGGGACAGAACTTTAAGTGTTCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR CCA 90 bp | GTAGCAGCACAGAGCAAGCAACTCACAGTAGTGCTGCAGGGTGATTTCAGTGCAGTTCTGAATAGGCTGTaGAGTAAGTCCTGTGCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: VAAQSKQLTVVLQGDFSAVLNRL*SKSCAV Trigger: TACGGCACAGGACTTACTCCACAGCCTATTCAGAAC...TGCACTGAAATCACCCTGCAGCACTACTGTGAGTTGCTTGCTCTGTGCTGCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR CCA 90 bp | GTCCAATTGTACAGGTGGCTTGAACACTTAAAGTTCTGTCCCTTAAACCAACAACAAGGGGGTGGTGCCTaGCAACGGTGCAGTGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VQLYRWLEHLKFCPLNQQQGGGA*QRCSGQ Trigger: CTGACCACTGCACCGTTGCCAGGCACCACCCCCTTG...TTGTTGGTTTAAGGGACAGAACTTTAAGTGTTCAAGCCACCTGTACAATTGGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| 3UTR CAA 72 bp | CTCGACAGAGCTAGACATAAACGGGGAGAGGGAATCTaGAGAACAGGCTCTGTAAGACTGGCCTGTAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LDRARHKRGEGI*RTGSVRLACKQ Trigger: TTGCTTACAGGCCAGTCTTACAGAGCCTGTTCTCAAGATTCCCTCTCCCCGTTTATGTCTAGCTCTGTCGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR CAA 72 bp | TTCTACTCCTATGAGCCCCCTTCTGAAACAGAAGCTTaGGGTACGGAATGTGTGTGCCTCCAGCTCAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FYSYEPPSETEA*GTECVCLQLKS Trigger: AGACTTGAGCTGGAGGCACACACATTCCGTACCCAAAGCTTCTGTTTCAGAAGGGGGCTCATAGGAGTAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| CDS-3UTR TCA 90 bp | GTAGCAGCACAGAGCAAGCAACTCACAGTAGTGCTGCAGGGTGATTTCAGTGCAAGACTGTTGGTGTTCTaGATAGGCTGTGGAGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VAAQSKQLTVVLQGDFSARLLVF*IGCGVS Trigger: ACTTACTCCACAGCCTATTCAGAACACCAACAGTCT...TGCACTGAAATCACCCTGCAGCACTACTGTGAGTTGCTTGCTCTGTGCTGCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR GCA 90 bp | CTTGAACACTTAAAGTTCTGTCCCTTAAACCAACAATCACCAACAGCAGTGTTTGGTACAAGGGGGTGGTaGCTGGCAACGGTGCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LEHLKFCPLNQQSPTAVFGTRGW*LATVQW Trigger: CCACTGCACCGTTGCCAGGCACCACCCCCTTGTACC...AAACACTGCTGTTGGTGATTGTTGGTTTAAGGGACAGAACTTTAAGTGTTCAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR CCA 90 bp | GTAGCAGCACAGAGCAAGCAACTCACAGTAGTGCTGCAGGGTGATTTCAGTGCAGCCGTAAGGCATCATTaGACTAAAGATGGGAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: VAAQSKQLTVVLQGDFSAAVRHH*TKDGNS Trigger: GGAATTCCCATCTTTAGTCCAATGATGCCTTACGGC...TGCACTGAAATCACCCTGCAGCACTACTGTGAGTTGCTTGCTCTGTGCTGCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR CCA 90 bp | CAGTGGCGCTCTTCTCAGTCTTGTTATCTCAGACAGGACCCTAGTAACCCTAAACTGAGGCACCCTGTGTaGGTTGCTGAGATGTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: QWRSSQSCYLRQDPSNPKLRHPV*VAEMLI Trigger: AATCAACATCTCAGCAACCCACACAGGGTGCCTCAG...TTTAGGGTTACTAGGGTCCTGTCTGAGATAACAAGACTGAGAAGAGCGCCACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| CDS-3UTR CCA 90 bp | GCCCAAGTAGCAGCACAGAGCAAGCAACTCACAGTAGTGCTGCAGGGTGATTTCATTGTTCTTCACTCTTaGCTCCTGTGCACACCATTT | + |
|
Preference number: 4 (lower is better) Translates to: AQVAAQSKQLTVVLQGDFIVLHS*LLCTPF Trigger: AAATGGTGTGCACAGGAGCCAAGAGTGAAGAACAAT...GAAATCACCCTGCAGCACTACTGTGAGTTGCTTGCTCTGTGCTGCTACTTGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000162505.8 |
||
| 3UTR CAA 72 bp | CAGTGTGGACGTGAATGTACCCAGCTAGGCACTCACTaGATTACATCTGGGTCAATCTTGGAAGTCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: QCGRECTQLGTH*ITSGSILEVHR Trigger: TCTGTGGACTTCCAAGATTGACCCAGATGTAATCAAGTGAGTGCCTAGCTGGGTACATTCACGTCCACACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR CAA 72 bp | AGTTTGAGACAGATTCTCATGGAGGCCAAGCTGGCCTaGAACTGTCTTCTGCTTCCACTTCCAGAGTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SLRQILMEAKLA*NCLLLPLPECK Trigger: TTTGCACTCTGGAAGTGGAAGCAGAAGACAGTTCAAGGCCAGCTTGGCCTCCATGAGAATCTGTCTCAAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR CAA 72 bp | AAAGGCTACAGCTGCGAACTAATTAAAGTTTGTCTTTaGTCCCCGAGTGCTGAGAATGCCCCCACTTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KGYSCELIKVCL*SPSAENAPTSL Trigger: GAGGGAAGTGGGGGCATTCTCAGCACTCGGGGACAAAAGACAAACTTTAATTAGTTCGCAGCTGTAGCCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| CDS-3UTR CCA 90 bp | GTAGCAGCACAGAGCAAGCAACTCACAGTAGTGCTGCAGGGTGATTTCAGTGCATTCTTGCTGCTAGTCTaGATTGTTCTTCACTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VAAQSKQLTVVLQGDFSAFLLLV*IVLHSW Trigger: CCAAGAGTGAAGAACAATCCAGACTAGCAGCAAGAA...TGCACTGAAATCACCCTGCAGCACTACTGTGAGTTGCTTGCTCTGTGCTGCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000162505.8 |
||
| CDS-3UTR GCA 90 bp | GTAGCAGCACAGAGCAAGCAACTCACAGTAGTGCTGCAGGGTGATTTCAGTGCATGCTGCTGTCTTTGTTaGTCTTCCAAAATAGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VAAQSKQLTVVLQGDFSACCCLC*SSKIER Trigger: TCTCTCTATTTTGGAAGAGCAACAAAGACAGCAGCA...TGCACTGAAATCACCCTGCAGCACTACTGTGAGTTGCTTGCTCTGTGCTGCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR CCA 90 bp | ATTAATACAACTATTCAGTCCTGCAATACTGGGAAGGCGGAATGTATCTGGCACGCCCTGAGCATAAGGTaGAAGGCTGTTGTTCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: INTTIQSCNTGKAECIWHALSIR*KAVVLV Trigger: GACCAGAACAACAGCCTTCCACCTTATGCTCAGGGC...GTGCCAGATACATTCCGCCTTCCCAGTATTGCAGGACTGAATAGTTGTATTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR CCA 90 bp | ATTAATACAACTATTCAGTCCTGCAATACTGGGAAGGCGGAATGTATCTGGCACAGAGCTCTCAGAAGCTaGTGTGGCAGGAGTGATAGG | + |
|
Preference number: 4 (lower is better) Translates to: INTTIQSCNTGKAECIWHRALRS*CGRSDR Trigger: CCTATCACTCCTGCCACACCAGCTTCTGAGAGCTCT...GTGCCAGATACATTCCGCCTTCCCAGTATTGCAGGACTGAATAGTTGTATTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| 3UTR CAA 72 bp | CAGCTAGGCACTCACTTGATTACATCTGGGTCAATCTaGGAAGTCCACAGATTCAAGGCTAAGTGCCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: QLGTHLITSGSI*EVHRFKAKCLI Trigger: GATCAGGCACTTAGCCTTGAATCTGTGGACTTCCAAGATTGACCCAGATGTAATCAAGTGAGTGCCTAGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR CAA 72 bp | ACTGAGAATCAAACCTGGGTCTTCTGCAAAAATAGCTaGGGCTCAGTTAATCTCCCAGCCAGCTCTAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TENQTWVFCKNS*GSVNLPASSSS Trigger: TGAGCTAGAGCTGGCTGGGAGATTAACTGAGCCCAAGCTATTTTTGCAGAAGACCCAGGTTTGATTCTCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR CAA 72 bp | TATAAAGTCAGAGCAGACAGAAGTGCCCTTCTTATGTaGTCCTCTTCCCAGGTCATGCCTCAGCTGTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: YKVRADRSALLM*SSSQVMPQLLN Trigger: GTTCAACAGCTGAGGCATGACCTGGGAAGAGGACAACATAAGAAGGGCACTTCTGTCTGCTCTGACTTTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| CDS-3UTR TCA 90 bp | ATTAATACAACTATTCAGTCCTGCAATACTGGGAAGGCGGAATGTATCTGGCACGCAGTGGTCAGAGTTTaGGAATGGAAGAGTTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: INTTIQSCNTGKAECIWHAVVRV*EWKSCG Trigger: CCCACAACTCTTCCATTCTCAAACTCTGACCACTGC...GTGCCAGATACATTCCGCCTTCCCAGTATTGCAGGACTGAATAGTTGTATTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR TCA 90 bp | GTCCAATTGTACAGGTGGCTTGAACACTTAAAGTTCTGTCCCTTAAACCAACAACATAGGAGTCATTGGTaGAGGGTACAAGGGGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VQLYRWLEHLKFCPLNQQHRSHW*RVQGGG Trigger: ACCACCCCCTTGTACCCTTCACCAATGACTCCTATG...TTGTTGGTTTAAGGGACAGAACTTTAAGTGTTCAAGCCACCTGTACAATTGGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR GCA 90 bp | ATTAATACAACTATTCAGTCCTGCAATACTGGGAAGGCGGAATGTATCTGGCACTGCTGCTGTTGCTGTTaGTGCTGCTGTCTTTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: INTTIQSCNTGKAECIWHCCCCC*CCCLCC Trigger: GCAACAAAGACAGCAGCAGCAACAGCAACAGCAGCA...GTGCCAGATACATTCCGCCTTCCCAGTATTGCAGGACTGAATAGTTGTATTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR GCA 90 bp | TGTCTGCTCACGCGTGTACTGTTGCTCATGTTTTTACAATTGGTAGTCATGAAAGCAGTTGCTACTGCCTaGTGTTGTTGCTGCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CLLTRVLLLMFLQLVVMKAVATA*CCCCCC Trigger: ACAGCAGCAGCAACAACAGCAGGCAGTAGCAACTGC...TTTCATGACTACCAATTGTAAAAACATGAGCAACAGTACACGCGTGAGCAGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| CDS-3UTR GCA 90 bp | GTGCTCTCTTCCGGCCTTGACGTGCACATACATACTTACATACATTTCTGCAAACACTCTTGGCTCCTGTaGACACCATTTTTCCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VLSSGLDVHIHTYIHFCKHSWLL*TPFFQN Trigger: GTTCTGGAAAAATGGTGTGCACAGGAGCCAAGAGTG...TTTGCAGAAATGTATGTAAGTATGTATGTGCACGTCAAGGCCGGAAGAGAGCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| CDS-3UTR CCA 90 bp | ATTAATACAACTATTCAGTCCTGCAATACTGGGAAGGCGGAATGTATCTGGCACCTGAGGCACCCTGTGTaGGTTGCTGAGATGTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: INTTIQSCNTGKAECIWHLRHPV*VAEMLI Trigger: AATCAACATCTCAGCAACCCACACAGGGTGCCTCAG...GTGCCAGATACATTCCGCCTTCCCAGTATTGCAGGACTGAATAGTTGTATTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR CCA 90 bp | GTCCAATTGTACAGGTGGCTTGAACACTTAAAGTTCTGTCCCTTAAACCAACAAAGAGCTCTCAGAAGCTaGTGTGGCAGGAGTGATAGG | + |
|
Preference number: 4 (lower is better) Translates to: VQLYRWLEHLKFCPLNQQRALRS*CGRSDR Trigger: CCTATCACTCCTGCCACACCAGCTTCTGAGAGCTCT...TTGTTGGTTTAAGGGACAGAACTTTAAGTGTTCAAGCCACCTGTACAATTGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR CCA 90 bp | TGTCTGCTCACGCGTGTACTGTTGCTCATGTTTTTACAATTGGTAGTCATGAAAAGAGCTCTCAGAAGCTaGTGTGGCAGGAGTGATAGG | + |
|
Preference number: 4 (lower is better) Translates to: CLLTRVLLLMFLQLVVMKRALRS*CGRSDR Trigger: CCTATCACTCCTGCCACACCAGCTTCTGAGAGCTCT...TTTCATGACTACCAATTGTAAAAACATGAGCAACAGTACACGCGTGAGCAGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR CAA 72 bp | TGCTTATTCATGGGCTCAAACACCCAGCGACACACTTaGCCTCATGCTTCCAGTGAACAAACTGAAGTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: CLFMGSNTQRHT*PHASSEQTEVL Trigger: TAGAACTTCAGTTTGTTCACTGGAAGCATGAGGCAAAGTGTGTCGCTGGGTGTTTGAGCCCATGAATAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| CDS-3UTR GCA 90 bp | GTCCAATTGTACAGGTGGCTTGAACACTTAAAGTTCTGTCCCTTAAACCAACAATGCTGCTGTTGCTGTTaGTGCTGCTGTCTTTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VQLYRWLEHLKFCPLNQQCCCCC*CCCLCC Trigger: GCAACAAAGACAGCAGCAGCAACAGCAACAGCAGCA...TTGTTGGTTTAAGGGACAGAACTTTAAGTGTTCAAGCCACCTGTACAATTGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR GCA 90 bp | CTTGAACACTTAAAGTTCTGTCCCTTAAACCAACAATCACCAACAGCAGTGTTTGCAGTTGCTACTGCCTaGTGTTGTTGCTGCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LEHLKFCPLNQQSPTAVFAVATA*CCCCCC Trigger: ACAGCAGCAGCAACAACAGCAGGCAGTAGCAACTGC...AAACACTGCTGTTGGTGATTGTTGGTTTAAGGGACAGAACTTTAAGTGTTCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR GCA 90 bp | ATTAATACAACTATTCAGTCCTGCAATACTGGGAAGGCGGAATGTATCTGGCACCACTCTTGGCTCCTGTaGACACCATTTTTCCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: INTTIQSCNTGKAECIWHHSWLL*TPFFQN Trigger: GTTCTGGAAAAATGGTGTGCACAGGAGCCAAGAGTG...GTGCCAGATACATTCCGCCTTCCCAGTATTGCAGGACTGAATAGTTGTATTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000162505.8 |
||
| CDS-3UTR GCA 90 bp | ATTAATACAACTATTCAGTCCTGCAATACTGGGAAGGCGGAATGTATCTGGCACAGCTCTTGGCTCCTGTaGACACCATTTTTCCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: INTTIQSCNTGKAECIWHSSWLL*TPFFQN Trigger: GTTCTGGAAAAATGGTGTGCACAGGAGCCAAGAGCT...GTGCCAGATACATTCCGCCTTCCCAGTATTGCAGGACTGAATAGTTGTATTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118001.8 |
||
| CDS-3UTR CCA 90 bp | CTTGAACACTTAAAGTTCTGTCCCTTAAACCAACAATCACCAACAGCAGTGTTTGCCCTGAGCATAAGGTaGAAGGCTGTTGTTCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LEHLKFCPLNQQSPTAVFALSIR*KAVVLV Trigger: GACCAGAACAACAGCCTTCCACCTTATGCTCAGGGC...AAACACTGCTGTTGGTGATTGTTGGTTTAAGGGACAGAACTTTAAGTGTTCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR CCA 90 bp | GAGGGCAATCTAGGCAACATAGTAAGAGCCTGTCTACTGACAATAAGCCATGTTGCCGTAAGGCATCATTaGACTAAAGATGGGAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: EGNLGNIVRACLLTISHVAVRHH*TKDGNS Trigger: GGAATTCCCATCTTTAGTCCAATGATGCCTTACGGC...AACATGGCTTATTGTCAGTAGACAGGCTCTTACTATGTTGCCTAGATTGCCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| CDS-3UTR CCA 90 bp | GTCCAATTGTACAGGTGGCTTGAACACTTAAAGTTCTGTCCCTTAAACCAACAACTGAGGCACCCTGTGTaGGTTGCTGAGATGTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: VQLYRWLEHLKFCPLNQQLRHPV*VAEMLI Trigger: AATCAACATCTCAGCAACCCACACAGGGTGCCTCAG...TTGTTGGTTTAAGGGACAGAACTTTAAGTGTTCAAGCCACCTGTACAATTGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| 3UTR CAA 72 bp | CTAACTTACCCTCTGTCTCTTACTAGCTATGGAACCTaGGACAAGGCTTTGGCAAAGGCTGAAAAAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: LTYPLSLTSYGT*DKALAKAEKGT Trigger: TGTTCCTTTTTCAGCCTTTGCCAAAGCCTTGTCCAAGGTTCCATAGCTAGTAAGAGACAGAGGGTAAGTTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| CDS-3UTR TCA 90 bp | CTTGAACACTTAAAGTTCTGTCCCTTAAACCAACAATCACCAACAGCAGTGTTTGCAGTGGTCAGAGTTTaGGAATGGAAGAGTTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LEHLKFCPLNQQSPTAVFAVVRV*EWKSCG Trigger: CCCACAACTCTTCCATTCTCAAACTCTGACCACTGC...AAACACTGCTGTTGGTGATTGTTGGTTTAAGGGACAGAACTTTAAGTGTTCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR TCA 90 bp | GTGCTCTCTTCCGGCCTTGACGTGCACATACATACTTACATACATTTCTGCAAACCATTTTTCCAGAACTaGAAATCAACGCAGTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VLSSGLDVHIHTYIHFCKPFFQN*KSTQLS Trigger: GGACAACTGCGTTGATTTTCAGTTCTGGAAAAATGG...TTTGCAGAAATGTATGTAAGTATGTATGTGCACGTCAAGGCCGGAAGAGAGCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| CDS-3UTR GCA 90 bp | TGCCACATTTTGTATGCAGACTCCAGTAATGAGTTAGTACAGAGTAGTGATAGGTGCTGTTGCTGTTGCTaGTGCTGTCTTTGTTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CHILYADSSNELVQSSDRCCCCC*CCLCCS Trigger: AGAGCAACAAAGACAGCAGCAGCAACAGCAACAGCA...CCTATCACTACTCTGTACTAACTCATTACTGGAGTCTGCATACAAAATGTGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| CDS-3UTR GCA 90 bp | CTTGAACACTTAAAGTTCTGTCCCTTAAACCAACAATCACCAACAGCAGTGTTTTGCTGCTGTTGCTGTTaGTGCTGCTGTCTTTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LEHLKFCPLNQQSPTAVFCCCCC*CCCLCC Trigger: GCAACAAAGACAGCAGCAGCAACAGCAACAGCAGCA...AAACACTGCTGTTGGTGATTGTTGGTTTAAGGGACAGAACTTTAAGTGTTCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR GCA 90 bp | GTCCAATTGTACAGGTGGCTTGAACACTTAAAGTTCTGTCCCTTAAACCAACAACACTCTTGGCTCCTGTaGACACCATTTTTCCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VQLYRWLEHLKFCPLNQQHSWLL*TPFFQN Trigger: GTTCTGGAAAAATGGTGTGCACAGGAGCCAAGAGTG...TTGTTGGTTTAAGGGACAGAACTTTAAGTGTTCAAGCCACCTGTACAATTGGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000162505.8 |
||
| CDS-3UTR CCA 90 bp | GTCCAATTGTACAGGTGGCTTGAACACTTAAAGTTCTGTCCCTTAAACCAACAAGTTCTGAATAGGCTGTaGAGTAAGTCCTGTGCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: VQLYRWLEHLKFCPLNQQVLNRL*SKSCAV Trigger: TACGGCACAGGACTTACTCCACAGCCTATTCAGAAC...TTGTTGGTTTAAGGGACAGAACTTTAAGTGTTCAAGCCACCTGTACAATTGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR CCA 90 bp | ATTAATACAACTATTCAGTCCTGCAATACTGGGAAGGCGGAATGTATCTGGCACCAACGCAGTTGTCCGTaGCTCTCTTATTCTCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: INTTIQSCNTGKAECIWHQRSCP*LSYSHD Trigger: ATCATGAGAATAAGAGAGCCACGGACAACTGCGTTG...GTGCCAGATACATTCCGCCTTCCCAGTATTGCAGGACTGAATAGTTGTATTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| 3UTR CAA 72 bp | GCAAGATCCCTTCTCACTTTAAACCACTGTCTTGGTTaGTTTTGTCAACTCGACAGAGCTAGACATAAACGG | + |
|
Preference number: 4 (lower is better) Translates to: ARSLLTLNHCLG*FCQLDRARHKR Trigger: CCGTTTATGTCTAGCTCTGTCGAGTTGACAAAACAAACCAAGACAGTGGTTTAAAGTGAGAAGGGATCTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR CAA 72 bp | TTTTCTAACTCCAGATCCAAGTGCTCTCTTCCGGCCTaGACGTGCACATACATACTTACATACATTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FSNSRSKCSLPA*TCTYILTYISA Trigger: TGCAGAAATGTATGTAAGTATGTATGTGCACGTCAAGGCCGGAAGAGAGCACTTGGATCTGGAGTTAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| CDS-3UTR TCA 90 bp | TGTCTGCTCACGCGTGTACTGTTGCTCATGTTTTTACAATTGGTAGTCATGAAAAGACTGTTGGTGTTCTaGATAGGCTGTGGAGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: CLLTRVLLLMFLQLVVMKRLLVF*IGCGVS Trigger: ACTTACTCCACAGCCTATTCAGAACACCAACAGTCT...TTTCATGACTACCAATTGTAAAAACATGAGCAACAGTACACGCGTGAGCAGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| CDS-3UTR TCA 90 bp | ATTAATACAACTATTCAGTCCTGCAATACTGGGAAGGCGGAATGTATCTGGCACCCATTTTTCCAGAACTaGAAATCAACGCAGTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: INTTIQSCNTGKAECIWHPFFQN*KSTQLS Trigger: GGACAACTGCGTTGATTTTCAGTTCTGGAAAAATGG...GTGCCAGATACATTCCGCCTTCCCAGTATTGCAGGACTGAATAGTTGTATTAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR GCA 90 bp | CTTGAACACTTAAAGTTCTGTCCCTTAAACCAACAATCACCAACAGCAGTGTTTTGTTGCTGTTGCTGCTaGTGTCTTTGTTGCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LEHLKFCPLNQQSPTAVFCCCCC*CLCCSS Trigger: GGAAGAGCAACAAAGACAGCAGCAGCAACAGCAACA...AAACACTGCTGTTGGTGATTGTTGGTTTAAGGGACAGAACTTTAAGTGTTCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR CCA 90 bp | CTTGAACACTTAAAGTTCTGTCCCTTAAACCAACAATCACCAACAGCAGTGTTTGTTCTGAATAGGCTGTaGAGTAAGTCCTGTGCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: LEHLKFCPLNQQSPTAVFVLNRL*SKSCAV Trigger: TACGGCACAGGACTTACTCCACAGCCTATTCAGAAC...AAACACTGCTGTTGGTGATTGTTGGTTTAAGGGACAGAACTTTAAGTGTTCAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR CCA 90 bp | ATTAATACAACTATTCAGTCCTGCAATACTGGGAAGGCGGAATGTATCTGGCACTTCTTGCTGCTAGTCTaGATTGTTCTTCACTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: INTTIQSCNTGKAECIWHFLLLV*IVLHSW Trigger: CCAAGAGTGAAGAACAATCCAGACTAGCAGCAAGAA...GTGCCAGATACATTCCGCCTTCCCAGTATTGCAGGACTGAATAGTTGTATTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000162505.8 |
||
| 3UTR CAA 72 bp | AAATGCACTAAGGCATTTATAAACGGCAAGGGCTATTaGAGGATATCTCTAGGCAGTGTGGACGTGAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: KCTKAFINGKGY*RISLGSVDVNV Trigger: TACATTCACGTCCACACTGCCTAGAGATATCCTCAAATAGCCCTTGCCGTTTATAAATGCCTTAGTGCATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| CDS-3UTR TCA 90 bp | GTCCAATTGTACAGGTGGCTTGAACACTTAAAGTTCTGTCCCTTAAACCAACAACCATTTTTCCAGAACTaGAAATCAACGCAGTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VQLYRWLEHLKFCPLNQQPFFQN*KSTQLS Trigger: GGACAACTGCGTTGATTTTCAGTTCTGGAAAAATGG...TTGTTGGTTTAAGGGACAGAACTTTAAGTGTTCAAGCCACCTGTACAATTGGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR GCA 90 bp | ATTAATACAACTATTCAGTCCTGCAATACTGGGAAGGCGGAATGTATCTGGCACTGCTGCTGTCTTTGTTaGTCTTCCAAAATAGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: INTTIQSCNTGKAECIWHCCCLC*SSKIER Trigger: TCTCTCTATTTTGGAAGAGCAACAAAGACAGCAGCA...GTGCCAGATACATTCCGCCTTCCCAGTATTGCAGGACTGAATAGTTGTATTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR CCA 90 bp | CTTGAACACTTAAAGTTCTGTCCCTTAAACCAACAATCACCAACAGCAGTGTTTGCCGTAAGGCATCATTaGACTAAAGATGGGAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: LEHLKFCPLNQQSPTAVFAVRHH*TKDGNS Trigger: GGAATTCCCATCTTTAGTCCAATGATGCCTTACGGC...AAACACTGCTGTTGGTGATTGTTGGTTTAAGGGACAGAACTTTAAGTGTTCAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR CCA 90 bp | CTTGAACACTTAAAGTTCTGTCCCTTAAACCAACAATCACCAACAGCAGTGTTTCAACGCAGTTGTCCGTaGCTCTCTTATTCTCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: LEHLKFCPLNQQSPTAVFQRSCP*LSYSHD Trigger: ATCATGAGAATAAGAGAGCCACGGACAACTGCGTTG...AAACACTGCTGTTGGTGATTGTTGGTTTAAGGGACAGAACTTTAAGTGTTCAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR CCA 90 bp | TGCCACATTTTGTATGCAGACTCCAGTAATGAGTTAGTACAGAGTAGTGATAGGTTCTTGCTGCTAGTCTaGATTGTTCTTCACTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CHILYADSSNELVQSSDRFLLLV*IVLHSW Trigger: CCAAGAGTGAAGAACAATCCAGACTAGCAGCAAGAA...CCTATCACTACTCTGTACTAACTCATTACTGGAGTCTGCATACAAAATGTGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| CDS-3UTR TCA 90 bp | CTTGAACACTTAAAGTTCTGTCCCTTAAACCAACAATCACCAACAGCAGTGTTTCCATTTTTCCAGAACTaGAAATCAACGCAGTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LEHLKFCPLNQQSPTAVFPFFQN*KSTQLS Trigger: GGACAACTGCGTTGATTTTCAGTTCTGGAAAAATGG...AAACACTGCTGTTGGTGATTGTTGGTTTAAGGGACAGAACTTTAAGTGTTCAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR GCA 90 bp | GTCCAATTGTACAGGTGGCTTGAACACTTAAAGTTCTGTCCCTTAAACCAACAATATTCTCATGATGACTaGAGCAAATCGCTTGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: VQLYRWLEHLKFCPLNQQYSHDD*SKSLGI Trigger: AATCCCAAGCGATTTGCTGCAGTCATCATGAGAATA...TTGTTGGTTTAAGGGACAGAACTTTAAGTGTTCAAGCCACCTGTACAATTGGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR GCA 90 bp | TGTCTGCTCACGCGTGTACTGTTGCTCATGTTTTTACAATTGGTAGTCATGAAATATTCTCATGATGACTaGAGCAAATCGCTTGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: CLLTRVLLLMFLQLVVMKYSHDD*SKSLGI Trigger: AATCCCAAGCGATTTGCTGCAGTCATCATGAGAATA...TTTCATGACTACCAATTGTAAAAACATGAGCAACAGTACACGCGTGAGCAGACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| CDS-3UTR CCA 90 bp | GTCCAATTGTACAGGTGGCTTGAACACTTAAAGTTCTGTCCCTTAAACCAACAACTGCAGCAAATCGCTTaGGATTATATTCAGCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: VQLYRWLEHLKFCPLNQQLQQIA*DYIQHF Trigger: GAAATGCTGAATATAATCCCAAGCGATTTGCTGCAG...TTGTTGGTTTAAGGGACAGAACTTTAAGTGTTCAAGCCACCTGTACAATTGGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR CCA 90 bp | CTTGAACACTTAAAGTTCTGTCCCTTAAACCAACAATCACCAACAGCAGTGTTTATTGTTCTTCACTCTTaGCTCCTGTGCACACCATTT | + |
|
Preference number: 4 (lower is better) Translates to: LEHLKFCPLNQQSPTAVFIVLHS*LLCTPF Trigger: AAATGGTGTGCACAGGAGCCAAGAGTGAAGAACAAT...AAACACTGCTGTTGGTGATTGTTGGTTTAAGGGACAGAACTTTAAGTGTTCAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000162505.8 |
||
| CDS-3UTR GCA 90 bp | CTTGAACACTTAAAGTTCTGTCCCTTAAACCAACAATCACCAACAGCAGTGTTTTGCTGCTGTCTTTGTTaGTCTTCCAAAATAGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LEHLKFCPLNQQSPTAVFCCCLC*SSKIER Trigger: TCTCTCTATTTTGGAAGAGCAACAAAGACAGCAGCA...AAACACTGCTGTTGGTGATTGTTGGTTTAAGGGACAGAACTTTAAGTGTTCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR CCA 90 bp | CTTGAACACTTAAAGTTCTGTCCCTTAAACCAACAATCACCAACAGCAGTGTTTCTGCAGCAAATCGCTTaGGATTATATTCAGCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: LEHLKFCPLNQQSPTAVFLQQIA*DYIQHF Trigger: GAAATGCTGAATATAATCCCAAGCGATTTGCTGCAG...AAACACTGCTGTTGGTGATTGTTGGTTTAAGGGACAGAACTTTAAGTGTTCAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR CCA 90 bp | GTCTTAAGAGTATCTGGAAAGGGAAGCTTTACAGATATGTTTCCTATAAACCTGATTGTTCTTCACTCTTaGCTCCTGTGCACACCATTT | + |
|
Preference number: 4 (lower is better) Translates to: VLRVSGKGSFTDMFPINLIVLHS*LLCTPF Trigger: AAATGGTGTGCACAGGAGCCAAGAGTGAAGAACAAT...CAGGTTTATAGGAAACATATCTGTAAAGCTTCCCTTTCCAGATACTCTTAAGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| CDS-3UTR GCA 90 bp | GTCTTAAGAGTATCTGGAAAGGGAAGCTTTACAGATATGTTTCCTATAAACCTGTGCTGCTGTCTTTGTTaGTCTTCCAAAATAGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VLRVSGKGSFTDMFPINLCCCLC*SSKIER Trigger: TCTCTCTATTTTGGAAGAGCAACAAAGACAGCAGCA...CAGGTTTATAGGAAACATATCTGTAAAGCTTCCCTTTCCAGATACTCTTAAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| CDS-3UTR CCA 90 bp | GGAAGAAAAAGACTTCCTTCTGATTACACATACTTGGAACTGTGCAAAATGTACCTGCAGCAAATCGCTTaGGATTATATTCAGCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: GRKRLPSDYTYLELCKMYLQQIA*DYIQHF Trigger: GAAATGCTGAATATAATCCCAAGCGATTTGCTGCAG...GTACATTTTGCACAGTTCCAAGTATGTGTAATCAGAAGGAAGTCTTTTTCTTCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR CAA 72 bp | ACTAGGGGAGCTGTTCAAATCAAGGTATCTAGGACATaGCAGATGCAATGTCTTATAATGCAATGTAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: TRGAVQIKVSRT*QMQCLIMQCKY Trigger: ATACTTACATTGCATTATAAGACATTGCATCTGCAATGTCCTAGATACCTTGATTTGAACAGCTCCCCTAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR CAA 72 bp | GGAAGCTATCTAATTAGAACTAGCTTCCACAGACGTTaGAGTTGTGAAATTATGGGATCATCCCATAATTAT | + |
|
Preference number: 4 (lower is better) Translates to: GSYLIRTSFHRR*SCEIMGSSHNY Trigger: ATAATTATGGGATGATCCCATAATTTCACAACTCAAACGTCTGTGGAAGCTAGTTCTAATTAGATAGCTTCC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| 3UTR CAA 72 bp | TACTCTGAAGAAAGAAAAGTATGTACAGCCATTGTTTaGATTAATACAACTATTCAGTCCTGCAATACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: YSEERKVCTAIV*INTTIQSCNTG Trigger: CCCAGTATTGCAGGACTGAATAGTTGTATTAATCAAAACAATGGCTGTACATACTTTTCTTTCTTCAGAGTA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS TCA 90 bp | GGGTACAAGGGGGTGGTGCCTGGCAACGGTGCAGTGGTCAGAGTTTaGGAATGGAAGAGTTGTGGGGTCTGGCCTGAGGCACCCTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GYKGVVPGNGAVVRV*EWKSCGVWPEAPCV Trigger: CACACAGGGTGCCTCAGGCCAGACCCCACAACTCTTCCATTCTCAAACTCTGACCACTGCACCGTTGCCAGGCACCACCCCCTTGTACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000119879.9 ENSMUST00000143924.8 ENSMUST00000147081.9 ENSMUST00000159197.8 ENSMUST00000162505.8 |
||
| CDS TCA 90 bp | TGGAAGAGTTGTGGGGTCTGGCCTGAGGCACCCTGTGTGGGTTGCTaGGATGTTGATTGCTGTACTGAGGCTGCTGCAGTTGCTACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: WKSCGVWPEAPCVGC*DVDCCTEAAAVATA Trigger: GGCAGTAGCAACTGCAGCAGCCTCAGTACAGCAATCAACATCTCAGCAACCCACACAGGGTGCCTCAGGCCAGACCCCACAACTCTTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000119879.9 ENSMUST00000143924.8 ENSMUST00000147081.9 ENSMUST00000159197.8 ENSMUST00000162505.8 |
||
| CDS CCA 90 bp | TCATTGGTGAAGGGTACAAGGGGGTGGTGCCTGGCAACGGTGCAGTaGTCAGAGTTTGAGAATGGAAGAGTTGTGGGGTCTGGCCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLVKGTRGWCLATVQ*SEFENGRVVGSGLR Trigger: CCTCAGGCCAGACCCCACAACTCTTCCATTCTCAAACTCTGACCACTGCACCGTTGCCAGGCACCACCCCCTTGTACCCTTCACCAATGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000119879.9 ENSMUST00000143924.8 ENSMUST00000147081.9 ENSMUST00000159197.8 ENSMUST00000162505.8 |
||
| CDS-3UTR CAA 90 bp | GCCCAAGTAGCAGCACAGAGCAAGCAACTCACAGTAGTGCTGCAGGGTGATTTCCTGAGGCTGCTGCAGTaGCTACTGCCTGCTGTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: AQVAAQSKQLTVVLQGDFLRLLQ*LLPAVV Trigger: AACAACAGCAGGCAGTAGCAACTGCAGCAGCCTCAG...GAAATCACCCTGCAGCACTACTGTGAGTTGCTTGCTCTGTGCTGCTACTTGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS CCA 90 bp | TTTGAGAATGGAAGAGTTGTGGGGTCTGGCCTGAGGCACCCTGTGTaGGTTGCTGAGATGTTGATTGCTGTACTGAGGCTGCTGCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: FENGRVVGSGLRHPV*VAEMLIAVLRLLQL Trigger: CAACTGCAGCAGCCTCAGTACAGCAATCAACATCTCAGCAACCCACACAGGGTGCCTCAGGCCAGACCCCACAACTCTTCCATTCTCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000119879.9 ENSMUST00000143924.8 ENSMUST00000147081.9 ENSMUST00000159197.8 ENSMUST00000162505.8 |
||
| CDS CCA 90 bp | GTTCTGAATAGGCTGTGGAGTAAGTCCTGTGCCGTAAGGCATCATTaGACTAAAGATGGGAATTCCAGGAGTCATGGCGCCCTGTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: VLNRLWSKSCAVRHH*TKDGNSRSHGALWG Trigger: TCCCCACAGGGCGCCATGACTCCTGGAATTCCCATCTTTAGTCCAATGATGCCTTACGGCACAGGACTTACTCCACAGCCTATTCAGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000119879.9 ENSMUST00000143924.8 ENSMUST00000147081.9 ENSMUST00000155051.8 ENSMUST00000159197.8 ENSMUST00000162505.8 |
||
| CDS GCA 90 bp | GAGGCTGCTGCAGTTGCTACTGCCTGCTGTTGTTGCTGCTGCTGTTaGTGTTGCTGCTGCTGTCTTTGTTGCTCTTCCAAAATAGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: EAAAVATACCCCCCC*CCCCCLCCSSKIER Trigger: TCTCTCTATTTTGGAAGAGCAACAAAGACAGCAGCAGCAACAGCAACAGCAGCAGCAACAACAGCAGGCAGTAGCAACTGCAGCAGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000119879.9 ENSMUST00000143924.8 ENSMUST00000147081.9 ENSMUST00000159197.8 ENSMUST00000162505.8 |
||
| CDS-3UTR CAA 90 bp | CCTGATCAGTCTGGGCTAAGTGGTTGCAAGATCCCTTCTCACTTTAAACCACTGCTGAGGCTGCTGCAGTaGCTACTGCCTGCTGTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: PDQSGLSGCKIPSHFKPLLRLLQ*LLPAVV Trigger: AACAACAGCAGGCAGTAGCAACTGCAGCAGCCTCAG...CAGTGGTTTAAAGTGAGAAGGGATCTTGCAACCACTTAGCCCAGACTGATCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| CDS GCA 90 bp | TGTACTGAGGCTGCTGCAGTTGCTACTGCCTGCTGTTGTTGCTGCTaGTGTTGCTGTTGCTGCTGCTGTCTTTGTTGCTCTTCCAAAATA | + |
|
Preference number: 5 (lower is better) Translates to: CTEAAAVATACCCCC*CCCCCCCLCCSSKI Trigger: TATTTTGGAAGAGCAACAAAGACAGCAGCAGCAACAGCAACAGCAGCAGCAACAACAGCAGGCAGTAGCAACTGCAGCAGCCTCAGTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000119879.9 ENSMUST00000143924.8 ENSMUST00000147081.9 ENSMUST00000159197.8 ENSMUST00000162505.8 |
||
| CDS-3UTR CAA 90 bp | GCCCAAGTAGCAGCACAGAGCAAGCAACTCACAGTAGTGCTGCAGGGTGATTTCCTGCTGCTGTCTTTGTaGCTCTTCCAAAATAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: AQVAAQSKQLTVVLQGDFLLLSL*LFQNRE Trigger: CTCTCTATTTTGGAAGAGCAACAAAGACAGCAGCAG...GAAATCACCCTGCAGCACTACTGTGAGTTGCTTGCTCTGTGCTGCTACTTGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR CAA 90 bp | GTAGCAGCACAGAGCAAGCAACTCACAGTAGTGCTGCAGGGTGATTTCAGTGCAGATTGTTCTTCACTCTaGGCTCCTGTGCACACCATT | + |
|
Preference number: 5 (lower is better) Translates to: VAAQSKQLTVVLQGDFSADCSSL*APVHTI Trigger: AATGGTGTGCACAGGAGCCAAGAGTGAAGAACAATC...TGCACTGAAATCACCCTGCAGCACTACTGTGAGTTGCTTGCTCTGTGCTGCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000162505.8 |
||
| CDS-3UTR CAA 90 bp | GTAGCAGCACAGAGCAAGCAACTCACAGTAGTGCTGCAGGGTGATTTCAGTGCACTGCTGCTGTCTTTGTaGCTCTTCCAAAATAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VAAQSKQLTVVLQGDFSALLLSL*LFQNRE Trigger: CTCTCTATTTTGGAAGAGCAACAAAGACAGCAGCAG...TGCACTGAAATCACCCTGCAGCACTACTGTGAGTTGCTTGCTCTGTGCTGCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR CAA 90 bp | ATTAATACAACTATTCAGTCCTGCAATACTGGGAAGGCGGAATGTATCTGGCACCTGAGGCTGCTGCAGTaGCTACTGCCTGCTGTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: INTTIQSCNTGKAECIWHLRLLQ*LLPAVV Trigger: AACAACAGCAGGCAGTAGCAACTGCAGCAGCCTCAG...GTGCCAGATACATTCCGCCTTCCCAGTATTGCAGGACTGAATAGTTGTATTAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR CAA 90 bp | GCCCAAGTAGCAGCACAGAGCAAGCAACTCACAGTAGTGCTGCAGGGTGATTTCTATATTCAGCATTTCTaGCACGAAGTGCAATGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: AQVAAQSKQLTVVLQGDFYIQHF*HEVQWS Trigger: AGACCATTGCACTTCGTGCAAGAAATGCTGAATATA...GAAATCACCCTGCAGCACTACTGTGAGTTGCTTGCTCTGTGCTGCTACTTGGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR CAA 90 bp | GATGTTGGCAAGCCCAAATCAATGTGTGGGTGGTGCCACCCCTGGGAGTATAAGACCATGTTCTGGATCTaGAAGTCTAAGAACTTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: DVGKPKSMCGWCHPWEYKTMFWI*KSKNLA Trigger: AGCTAAGTTCTTAGACTTCAAGATCCAGAACATGGT...CTTATACTCCCAGGGGTGGCACCACCCACACATTGATTTGGGCTTGCCAACATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| CDS-3UTR CAA 90 bp | GTCCAATTGTACAGGTGGCTTGAACACTTAAAGTTCTGTCCCTTAAACCAACAACTGAGGCTGCTGCAGTaGCTACTGCCTGCTGTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: VQLYRWLEHLKFCPLNQQLRLLQ*LLPAVV Trigger: AACAACAGCAGGCAGTAGCAACTGCAGCAGCCTCAG...TTGTTGGTTTAAGGGACAGAACTTTAAGTGTTCAAGCCACCTGTACAATTGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS CCA 90 bp | TTGCTCTTCCAAAATAGAGAGACTGTTGGTGTTCTGAATAGGCTGTaGAGTAAGTCCTGTGCCGTAAGGCATCATTGGACTAAAGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: LLFQNRETVGVLNRL*SKSCAVRHHWTKDG Trigger: CCCATCTTTAGTCCAATGATGCCTTACGGCACAGGACTTACTCCACAGCCTATTCAGAACACCAACAGTCTCTCTATTTTGGAAGAGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000119879.9 ENSMUST00000143924.8 ENSMUST00000147081.9 ENSMUST00000155051.8 ENSMUST00000159197.8 ENSMUST00000162505.8 |
||
| CDS-3UTR CAA 90 bp | ATTAATACAACTATTCAGTCCTGCAATACTGGGAAGGCGGAATGTATCTGGCACTGGGTTGCTGAGATGTaGATTGCTGTACTGAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: INTTIQSCNTGKAECIWHWVAEM*IAVLRL Trigger: CAGCCTCAGTACAGCAATCAACATCTCAGCAACCCA...GTGCCAGATACATTCCGCCTTCCCAGTATTGCAGGACTGAATAGTTGTATTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS CCA 90 bp | TGTGCACACCATTTTTCCAGAACTGAAAATCAACGCAGTTGTCCGTaGCTCTCTTATTCTCATGATGACTGCAGCAAATCGCTTGGGATT | + |
|
Preference number: 5 (lower is better) Translates to: CAHHFSRTENQRSCP*LSYSHDDCSKSLGI Trigger: AATCCCAAGCGATTTGCTGCAGTCATCATGAGAATAAGAGAGCCACGGACAACTGCGTTGATTTTCAGTTCTGGAAAAATGGTGTGCACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000119879.9 ENSMUST00000162505.8 |
||
| CDS-3UTR CAA 90 bp | TGTTATTGGGAGGGCTGGTGTACTCAAGAGTTGAGTGTAAGACTCAGCAATCATCTGCTGCTGTCTTTGTaGCTCTTCCAAAATAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: CYWEGWCTQELSVRLSNHLLLSL*LFQNRE Trigger: CTCTCTATTTTGGAAGAGCAACAAAGACAGCAGCAG...ATGATTGCTGAGTCTTACACTCAACTCTTGAGTACACCAGCCCTCCCAATAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| CDS-3UTR CAA 90 bp | CAGTGGCGCTCTTCTCAGTCTTGTTATCTCAGACAGGACCCTAGTAACCCTAAATATATTCAGCATTTCTaGCACGAAGTGCAATGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: QWRSSQSCYLRQDPSNPKYIQHF*HEVQWS Trigger: AGACCATTGCACTTCGTGCAAGAAATGCTGAATATA...TTTAGGGTTACTAGGGTCCTGTCTGAGATAACAAGACTGAGAAGAGCGCCACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162505.8 |
||
| CDS-3UTR CAA 90 bp | ATTAATACAACTATTCAGTCCTGCAATACTGGGAAGGCGGAATGTATCTGGCACGATTGTTCTTCACTCTaGGCTCCTGTGCACACCATT | + |
|
Preference number: 5 (lower is better) Translates to: INTTIQSCNTGKAECIWHDCSSL*APVHTI Trigger: AATGGTGTGCACAGGAGCCAAGAGTGAAGAACAATC...GTGCCAGATACATTCCGCCTTCCCAGTATTGCAGGACTGAATAGTTGTATTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000162505.8 |
||
| CDS-3UTR CAA 90 bp | CTTGAACACTTAAAGTTCTGTCCCTTAAACCAACAATCACCAACAGCAGTGTTTTGGGTTGCTGAGATGTaGATTGCTGTACTGAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LEHLKFCPLNQQSPTAVFWVAEM*IAVLRL Trigger: CAGCCTCAGTACAGCAATCAACATCTCAGCAACCCA...AAACACTGCTGTTGGTGATTGTTGGTTTAAGGGACAGAACTTTAAGTGTTCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR CAA 90 bp | GTCCAATTGTACAGGTGGCTTGAACACTTAAAGTTCTGTCCCTTAAACCAACAAGATTGTTCTTCACTCTaGGCTCCTGTGCACACCATT | + |
|
Preference number: 5 (lower is better) Translates to: VQLYRWLEHLKFCPLNQQDCSSL*APVHTI Trigger: AATGGTGTGCACAGGAGCCAAGAGTGAAGAACAATC...TTGTTGGTTTAAGGGACAGAACTTTAAGTGTTCAAGCCACCTGTACAATTGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000162505.8 |
||
| CDS-3UTR CAA 90 bp | GTCCAATTGTACAGGTGGCTTGAACACTTAAAGTTCTGTCCCTTAAACCAACAACTGCTGCTGTCTTTGTaGCTCTTCCAAAATAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VQLYRWLEHLKFCPLNQQLLLSL*LFQNRE Trigger: CTCTCTATTTTGGAAGAGCAACAAAGACAGCAGCAG...TTGTTGGTTTAAGGGACAGAACTTTAAGTGTTCAAGCCACCTGTACAATTGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR CAA 90 bp | ATTAATACAACTATTCAGTCCTGCAATACTGGGAAGGCGGAATGTATCTGGCACTATATTCAGCATTTCTaGCACGAAGTGCAATGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: INTTIQSCNTGKAECIWHYIQHF*HEVQWS Trigger: AGACCATTGCACTTCGTGCAAGAAATGCTGAATATA...GTGCCAGATACATTCCGCCTTCCCAGTATTGCAGGACTGAATAGTTGTATTAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR CAA 90 bp | CTTGAACACTTAAAGTTCTGTCCCTTAAACCAACAATCACCAACAGCAGTGTTTTTGCTGCTGCTGTCTTaGTTGCTCTTCCAAAATAGA | + |
|
Preference number: 5 (lower is better) Translates to: LEHLKFCPLNQQSPTAVFLLLLS*LLFQNR Trigger: TCTATTTTGGAAGAGCAACAAAGACAGCAGCAGCAA...AAACACTGCTGTTGGTGATTGTTGGTTTAAGGGACAGAACTTTAAGTGTTCAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR CAA 90 bp | GTCCAATTGTACAGGTGGCTTGAACACTTAAAGTTCTGTCCCTTAAACCAACAATATATTCAGCATTTCTaGCACGAAGTGCAATGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VQLYRWLEHLKFCPLNQQYIQHF*HEVQWS Trigger: AGACCATTGCACTTCGTGCAAGAAATGCTGAATATA...TTGTTGGTTTAAGGGACAGAACTTTAAGTGTTCAAGCCACCTGTACAATTGGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000162505.8 |
||
| CDS-3UTR CAA 90 bp | GTCCAATTGTACAGGTGGCTTGAACACTTAAAGTTCTGTCCCTTAAACCAACAAACCATGTTCTGGATCTaGAAGTCTAAGAACTTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VQLYRWLEHLKFCPLNQQTMFWI*KSKNLA Trigger: AGCTAAGTTCTTAGACTTCAAGATCCAGAACATGGT...TTGTTGGTTTAAGGGACAGAACTTTAAGTGTTCAAGCCACCTGTACAATTGGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000162505.8 |
||
| CDS TCA 72 bp | GGGGTGGTGCCTGGCAACGGTGCAGTGGTCAGAGTTTaGGAATGGAAGAGTTGTGGGGTCTGGCCTGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: GVVPGNGAVVRV*EWKSCGVWPEA Trigger: TGCCTCAGGCCAGACCCCACAACTCTTCCATTCTCAAACTCTGACCACTGCACCGTTGCCAGGCACCACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000119879.9 ENSMUST00000143924.8 ENSMUST00000147081.9 ENSMUST00000159197.8 ENSMUST00000162505.8 |
||
| CDS TCA 72 bp | TGTGGGGTCTGGCCTGAGGCACCCTGTGTGGGTTGCTaGGATGTTGATTGCTGTACTGAGGCTGCTGCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: CGVWPEAPCVGC*DVDCCTEAAAV Trigger: AACTGCAGCAGCCTCAGTACAGCAATCAACATCTCAGCAACCCACACAGGGTGCCTCAGGCCAGACCCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000119879.9 ENSMUST00000143924.8 ENSMUST00000147081.9 ENSMUST00000159197.8 ENSMUST00000162505.8 |
||
| CDS CCA 72 bp | GGAAGAGTTGTGGGGTCTGGCCTGAGGCACCCTGTGTaGGTTGCTGAGATGTTGATTGCTGTACTGAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GRVVGSGLRHPV*VAEMLIAVLRL Trigger: CAGCCTCAGTACAGCAATCAACATCTCAGCAACCCACACAGGGTGCCTCAGGCCAGACCCCACAACTCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000119879.9 ENSMUST00000143924.8 ENSMUST00000147081.9 ENSMUST00000159197.8 ENSMUST00000162505.8 |
||
| CDS CCA 72 bp | AGGCTGTGGAGTAAGTCCTGTGCCGTAAGGCATCATTaGACTAAAGATGGGAATTCCAGGAGTCATGGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: RLWSKSCAVRHH*TKDGNSRSHGA Trigger: GGCGCCATGACTCCTGGAATTCCCATCTTTAGTCCAATGATGCCTTACGGCACAGGACTTACTCCACAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000119879.9 ENSMUST00000143924.8 ENSMUST00000147081.9 ENSMUST00000155051.8 ENSMUST00000159197.8 ENSMUST00000162505.8 |
||
| CDS CCA 72 bp | TTGAAGCTGCGGTACAATTCCAGAGCTCTCAGAAGCTaGTGTGGCAGGAGTGATAGGGGTCATAGGAGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: LKLRYNSRALRS*CGRSDRGHRSH Trigger: ATGACTCCTATGACCCCTATCACTCCTGCCACACCAGCTTCTGAGAGCTCTGGAATTGTACCGCAGCTTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000119879.9 ENSMUST00000143924.8 ENSMUST00000147081.9 ENSMUST00000162505.8 |
||
| CDS GCA 72 bp | GCTACTGCCTGCTGTTGTTGCTGCTGCTGTTGCTGTTaGTGCTGCTGTCTTTGTTGCTCTTCCAAAATAGAG | + |
|
Preference number: 6 (lower is better) Translates to: ATACCCCCCCCC*CCCLCCSSKIE Trigger: CTCTATTTTGGAAGAGCAACAAAGACAGCAGCAGCAACAGCAACAGCAGCAGCAACAACAGCAGGCAGTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000119879.9 ENSMUST00000143924.8 ENSMUST00000147081.9 ENSMUST00000155051.8 ENSMUST00000159197.8 ENSMUST00000162505.8 |
||
| CDS GCA 72 bp | ACTGCCTGCTGTTGTTGCTGCTGCTGTTGCTGTTGCTaGTGCTGTCTTTGTTGCTCTTCCAAAATAGAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: TACCCCCCCCCC*CCLCCSSKIER Trigger: TCTCTCTATTTTGGAAGAGCAACAAAGACAGCAGCAGCAACAGCAACAGCAGCAGCAACAACAGCAGGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000119879.9 ENSMUST00000143924.8 ENSMUST00000147081.9 ENSMUST00000155051.8 ENSMUST00000159197.8 ENSMUST00000162505.8 |
||
| CDS CAA 72 bp | TGCTACTGCCTGCTGTTGTTGCTGCTGCTGTTGCTGTaGCTGCTGCTGTCTTTGTTGCTCTTCCAAAATAGA | + |
|
Preference number: 6 (lower is better) Translates to: CYCLLLLLLLLL*LLLSLLLFQNR Trigger: TCTATTTTGGAAGAGCAACAAAGACAGCAGCAGCAACAGCAACAGCAGCAGCAACAACAGCAGGCAGTAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000119879.9 ENSMUST00000143924.8 ENSMUST00000147081.9 ENSMUST00000155051.8 ENSMUST00000159197.8 ENSMUST00000162505.8 |
||
| CDS CAA 90 bp | CTGCTGTTGTTGCTGCTGCTGTTGCTGTTGCTGCTGCTGTCTTTGTaGCTCTTCCAAAATAGAGAGACTGTTGGTGTTCTGAATAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: LLLLLLLLLLLLLSL*LFQNRETVGVLNRL Trigger: CAGCCTATTCAGAACACCAACAGTCTCTCTATTTTGGAAGAGCAACAAAGACAGCAGCAGCAACAGCAACAGCAGCAGCAACAACAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000119879.9 ENSMUST00000143924.8 ENSMUST00000147081.9 ENSMUST00000155051.8 ENSMUST00000159197.8 ENSMUST00000162505.8 |
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| CDS CAA 90 bp | TGCCTGCTGTTGTTGCTGCTGCTGTTGCTGTTGCTGCTGCTGTCTTaGTTGCTCTTCCAAAATAGAGAGACTGTTGGTGTTCTGAATAGG | + |
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Preference number: 6 (lower is better) Translates to: CLLLLLLLLLLLLLS*LLFQNRETVGVLNR Trigger: CCTATTCAGAACACCAACAGTCTCTCTATTTTGGAAGAGCAACAAAGACAGCAGCAGCAACAGCAACAGCAGCAGCAACAACAGCAGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000119879.9 ENSMUST00000143924.8 ENSMUST00000147081.9 ENSMUST00000155051.8 ENSMUST00000159197.8 ENSMUST00000162505.8 |
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| CDS TCA 72 bp | CACTCTTGGCTCCTGTGCACACCATTTTTCCAGAACTaGAAATCAACGCAGTTGTCCGTGGCTCTCTTATTC | + |
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Preference number: 6 (lower is better) Translates to: HSWLLCTPFFQN*KSTQLSVALLF Trigger: GAATAAGAGAGCCACGGACAACTGCGTTGATTTTCAGTTCTGGAAAAATGGTGTGCACAGGAGCCAAGAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000119879.9 ENSMUST00000162505.8 |
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| CDS TCA 72 bp | AGCTCTTGGCTCCTGTGCACACCATTTTTCCAGAACTaGAAATCAACGCAGTTGTCCGTGGCTCTCTTATTC | + |
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Preference number: 6 (lower is better) Translates to: SSWLLCTPFFQN*KSTQLSVALLF Trigger: GAATAAGAGAGCCACGGACAACTGCGTTGATTTTCAGTTCTGGAAAAATGGTGTGCACAGGAGCCAAGAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118001.8 |
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| CDS CCA 72 bp | CAAAATAGAGAGACTGTTGGTGTTCTGAATAGGCTGTaGAGTAAGTCCTGTGCCGTAAGGCATCATTGGACT | + |
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Preference number: 6 (lower is better) Translates to: QNRETVGVLNRL*SKSCAVRHHWT Trigger: AGTCCAATGATGCCTTACGGCACAGGACTTACTCCACAGCCTATTCAGAACACCAACAGTCTCTCTATTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000119879.9 ENSMUST00000143924.8 ENSMUST00000147081.9 ENSMUST00000155051.8 ENSMUST00000159197.8 ENSMUST00000162505.8 |
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| CDS GCA 72 bp | CGCAGTTGTCCGTGGCTCTCTTATTCTCATGATGACTaGAGCAAATCGCTTGGGATTATATTCAGCATTTCT | + |
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Preference number: 6 (lower is better) Translates to: RSCPWLSYSHDD*SKSLGIIFSIS Trigger: AGAAATGCTGAATATAATCCCAAGCGATTTGCTGCAGTCATCATGAGAATAAGAGAGCCACGGACAACTGCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000119879.9 ENSMUST00000162505.8 |
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| CDS CCA 72 bp | TGGGATTATATTCAGCATTTCTTGCACGAAGTGCAATaGTCTTTAGGTCAAGTTTACAGCCAAGATTCACGG | + |
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Preference number: 6 (lower is better) Translates to: WDYIQHFLHEVQ*SLGQVYSQDSR Trigger: CCGTGAATCTTGGCTGTAAACTTGACCTAAAGACCATTGCACTTCGTGCAAGAAATGCTGAATATAATCCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000119879.9 ENSMUST00000147081.9 ENSMUST00000162505.8 |
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| CDS CAA 72 bp | CTGCAGCAAATCGCTTGGGATTATATTCAGCATTTCTaGCACGAAGTGCAATGGTCTTTAGGTCAAGTTTAC | + |
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Preference number: 6 (lower is better) Translates to: LQQIAWDYIQHF*HEVQWSLGQVY Trigger: GTAAACTTGACCTAAAGACCATTGCACTTCGTGCAAGAAATGCTGAATATAATCCCAAGCGATTTGCTGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000014911.12 ENSMUST00000117593.8 ENSMUST00000118001.8 ENSMUST00000119879.9 ENSMUST00000162505.8 |
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