RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TBL2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000005374

Ensembl transcript IDs: ENSMUST00000005508.14, ENSMUST00000139565.8, ENSMUST00000152013.2, ENSMUST00000153183.8, ENSMUST00000201780.2

Found 281 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GATGCCCGCTTCAGGAGGCTCTGCATCTCCTCCACCACAGCCCGGTaGCCAGGGGTATTGTGGAAGAGCCGCACTGCACGGTCCCCACAG +
Preference number: 1 (lower is better)
Translates to: DARFRRLCISSTTAR*PGVLWKSRTARSPQ
Trigger: CTGTGGGGACCGTGCAGTGCGGCTCTTCCACAATACCCCTGGCCACCGGGCTGTGGTGGAGGAGATGCAGAGCCTCCTGAAGCGGGCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR GCA 90 bp CTCCACCACAGCCCGGTGGCCAGGGGTATTGTGGAAGAGCCGCACTaGACGGTCCCCACAGGAGGCCAGGAAGCGGCCAGTGATGTCAAA +
Preference number: 1 (lower is better)
Translates to: LHHSPVARGIVEEPH*TVPTGGQEAASDVK
Trigger: TTTGACATCACTGGCCGCTTCCTGGCCTCCTGTGGGGACCGTGCAGTGCGGCTCTTCCACAATACCCCTGGCCACCGGGCTGTGGTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR GCA 90 bp GCACCCAGGCTCTTGAGGGCCTCTTGGGCCTGGGTTAGCTGTTGCTaGAGCCTCTGGCGGGTACTTTCGCTGGATGCCCGCTTCAGGAGG +
Preference number: 1 (lower is better)
Translates to: APRLLRASWAWVSCC*SLWRVLSLDARFRR
Trigger: CCTCCTGAAGCGGGCATCCAGCGAAAGTACCCGCCAGAGGCTGCAGCAACAGCTAACCCAGGCCCAAGAGGCCCTCAAGAGCCTGGGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR GCA 90 bp AGGGCACCCAGGCTCTTGAGGGCCTCTTGGGCCTGGGTTAGCTGTTaGTGCAGCCTCTGGCGGGTACTTTCGCTGGATGCCCGCTTCAGG +
Preference number: 1 (lower is better)
Translates to: RAPRLLRASWAWVSC*CSLWRVLSLDARFR
Trigger: CCTGAAGCGGGCATCCAGCGAAAGTACCCGCCAGAGGCTGCAGCAACAGCTAACCCAGGCCCAAGAGGCCCTCAAGAGCCTGGGTGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR CCA 90 bp GGGCCTGGGTTAGCTGTTGCTGCAGCCTCTGGCGGGTACTTTCGCTaGATGCCCGCTTCAGGAGGCTCTGCATCTCCTCCACCACAGCCC +
Preference number: 1 (lower is better)
Translates to: GPGLAVAAASGGYFR*MPASGGSASPPPQP
Trigger: GGGCTGTGGTGGAGGAGATGCAGAGCCTCCTGAAGCGGGCATCCAGCGAAAGTACCCGCCAGAGGCTGCAGCAACAGCTAACCCAGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR GCA 90 bp ATTGGTGCCAGTGGCCAAGGCCAGGACATGGGTATCAGGGGAGAGTaGCAGGCGGCAAGGCATGGTGCTCGCCTCTTCAAAGCGGCCTGT +
Preference number: 1 (lower is better)
Translates to: IGASGQGQDMGIRGE*QAARHGARLFKAAC
Trigger: ACAGGCCGCTTTGAAGAGGCGAGCACCATGCCTTGCCGCCTGGCACTCTCCCCTGATACCCATGTCCTGGCCTTGGCCACTGGCACCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR CCA 90 bp AGGCCAGGACATGGGTATCAGGGGAGAGTGCCAGGCGGCAAGGCATaGTGCTCGCCTCTTCAAAGCGGCCTGTCCGTAGCAAGTAGGGGT +
Preference number: 1 (lower is better)
Translates to: RPGHGYQGRVPGGKA*CSPLQSGLSVASRG
Trigger: ACCCCTACTTGCTACGGACAGGCCGCTTTGAAGAGGCGAGCACCATGCCTTGCCGCCTGGCACTCTCCCCTGATACCCATGTCCTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR CCA 90 bp CTCTTGAGGGCCTCTTGGGCCTGGGTTAGCTGTTGCTGCAGCCTCTaGCGGGTACTTTCGCTGGATGCCCGCTTCAGGAGGCTCTGCATC +
Preference number: 1 (lower is better)
Translates to: LLRASWAWVSCCCSL*RVLSLDARFRRLCI
Trigger: GATGCAGAGCCTCCTGAAGCGGGCATCCAGCGAAAGTACCCGCCAGAGGCTGCAGCAACAGCTAACCCAGGCCCAAGAGGCCCTCAAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR TCA 90 bp GCATGGTCCAGCTCCACGTTGGCTCTCATGCTGCGGTGCTCCCGCTaGAGGAAATCTTTAGTGCTCCAGATACGGACAGTGCGGTCATCC +
Preference number: 1 (lower is better)
Translates to: AWSSSTLALMLRCSR*RKSLVLQIRTVRSS
Trigger: GGATGACCGCACTGTCCGTATCTGGAGCACTAAAGATTTCCTTCAGCGGGAGCACCGCAGCATGAGAGCCAACGTGGAGCTGGACCATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000139565.8
3UTR TCA 90 bp TATTCCCACTGTGGCTCTTCAGTGCTGCAGCCAGAAGGGGGTGCGTaGAGCTGTGCTGCTGAGGCTTCTCCTTACGAACCCGCTGATTCT +
Preference number: 1 (lower is better)
Translates to: YSHCGSSVLQPEGGA*SCAAEASPYEPADS
Trigger: AGAATCAGCGGGTTCGTAAGGAGAAGCCTCAGCAGCACAGCTTCACGCACCCCCTTCTGGCTGCAGCACTGAAGAGCCACAGTGGGAATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000139565.8
ENSMUST00000201780.2
3UTR TCA 90 bp CACTCAAAGTACTCCTCCTTCTCCCCGCGGCGTGTGTTGAAGAGATaGATATTGGTGCCAGTGGCCAAGGCCAGGACATGGGTATCAGGG +
Preference number: 1 (lower is better)
Translates to: HSKYSSFSPRRVLKR*ILVPVAKARTWVSG
Trigger: CCCTGATACCCATGTCCTGGCCTTGGCCACTGGCACCAATATTCATCTCTTCAACACACGCCGCGGGGAGAAGGAGGAGTACTTTGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR TCA 90 bp CATGGACACACTCAAAGTACTCCTCCTTCTCCCCGCGGCGTGTGTTaGAGAGATGAATATTGGTGCCAGTGGCCAAGGCCAGGACATGGG +
Preference number: 1 (lower is better)
Translates to: HGHTQSTPPSPRGVC*RDEYWCQWPRPGHG
Trigger: CCCATGTCCTGGCCTTGGCCACTGGCACCAATATTCATCTCTTCAACACACGCCGCGGGGAGAAGGAGGAGTACTTTGAGTGTGTCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR GCA 90 bp GCTGCTGAAGTCCATGCAAGATATATTCCCACTGTGGCTCTTCAGTaGTGCAGCCAGAAGGGGGTGCGTGAAGCTGTGCTGCTGAGGCTT +
Preference number: 1 (lower is better)
Translates to: AAEVHARYIPTVALQ*CSQKGVREAVLLRL
Trigger: AAGCCTCAGCAGCACAGCTTCACGCACCCCCTTCTGGCTGCAGCACTGAAGAGCCACAGTGGGAATATATCTTGCATGGACTTCAGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000139565.8
ENSMUST00000201780.2
3UTR TCA 90 bp CAGTGCGGTCATCCGCACAGGTGGCCAGATACTTGCCGTTGCTGCTaGAGTCCATGCAAGATATATTCCCACTGTGGCTCTTCAGTGCTG +
Preference number: 1 (lower is better)
Translates to: QCGHPHRWPDTCRCC*SPCKIYSHCGSSVL
Trigger: CAGCACTGAAGAGCCACAGTGGGAATATATCTTGCATGGACTTCAGCAGCAACGGCAAGTATCTGGCCACCTGTGCGGATGACCGCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000139565.8
ENSMUST00000201780.2
3UTR TCA 90 bp TCCAGGCCACAGGCCAGTGAATTGGCCAGTTTGGGAACAGACTTCTaGCTTCAGCAGCTCAGCATTCTTGCTAGGGTTCACTGCCTTCCC +
Preference number: 1 (lower is better)
Translates to: SRPQASELASLGTDF*LQQLSILARVHCLP
Trigger: GGGAAGGCAGTGAACCCTAGCAAGAATGCTGAGCTGCTGAAGTCAGAAGTCTGTTCCCAAACTGGCCAATTCACTGGCCTGTGGCCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR TCA 90 bp ACTCTGGCAGCCTCTGTGATTACAGGACTCCAGGCCACAGGCCAGTaGATTGGCCAGTTTGGGAACAGACTTCTGACTTCAGCAGCTCAG +
Preference number: 1 (lower is better)
Translates to: TLAASVITGLQATGQ*IGQFGNRLLTSAAQ
Trigger: CTGAGCTGCTGAAGTCAGAAGTCTGTTCCCAAACTGGCCAATTCACTGGCCTGTGGCCTGGAGTCCTGTAATCACAGAGGCTGCCAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR GCA 90 bp CAAAGTACAGTGCCAGCATCTAACTTCTCTGCAACTGGCAACTTCTaGGGCTTATCAGTCAGTAGCGGCTCCCTCCCACTGTGCACCCAG +
Preference number: 1 (lower is better)
Translates to: QSTVPASNFSATGNF*GLSVSSGSLPLCTQ
Trigger: CTGGGTGCACAGTGGGAGGGAGCCGCTACTGACTGATAAGCCGCAGAAGTTGCCAGTTGCAGAGAAGTTAGATGCTGGCACTGTACTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR GCA 90 bp GGAAAAGTAAGGAAGAATCCTTCAGCACCAATGAGACTGATGAGCTaGGCCCTCCCCCGTCAGGGTTTGGTGCAGTCCACAAGGATGCCT +
Preference number: 1 (lower is better)
Translates to: GKVRKNPSAPMRLMS*ALPRQGLVQSTRMP
Trigger: AGGCATCCTTGTGGACTGCACCAAACCCTGACGGGGGAGGGCGCAGCTCATCAGTCTCATTGGTGCTGAAGGATTCTTCCTTACTTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR GCA 90 bp CTGACTCGTGGTTCTTCAACCTGCCAAGCCCTTGGGCTGCATGCATaGACTACCACACCTTGTGTAGAATCAGCAGATCAATGCCGCCTC +
Preference number: 1 (lower is better)
Translates to: LTRGSSTCQALGLHA*TTTPCVESADQCRL
Trigger: GAGGCGGCATTGATCTGCTGATTCTACACAAGGTGTGGTAGTGCATGCATGCAGCCCAAGGGCTTGGCAGGTTGAAGAACCACGAGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR CCA 90 bp AAAGGAAAAGCGGCAGGGCACCAGGAGGGACAGGATTGGTGGAAATaGCTACTTCGGAGGGAGTTGGTGAGGTGGCAACTGTTTTCCAGT +
Preference number: 1 (lower is better)
Translates to: KGKAAGHQEGQDWWK*LLRRELVRWQLFSS
Trigger: ACTGGAAAACAGTTGCCACCTCACCAACTCCCTCCGAAGTAGCCATTTCCACCAATCCTGTCCCTCCTGGTGCCCTGCCGCTTTTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR CCA 90 bp GGCAGCCTCTGTGATTACAGGACTCCAGGCCACAGGCCAGTGAATTaGCCAGTTTGGGAACAGACTTCTGACTTCAGCAGCTCAGCATTC +
Preference number: 1 (lower is better)
Translates to: GSLCDYRTPGHRPVN*PVWEQTSDFSSSAF
Trigger: GAATGCTGAGCTGCTGAAGTCAGAAGTCTGTTCCCAAACTGGCCAATTCACTGGCCTGTGGCCTGGAGTCCTGTAATCACAGAGGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR GCA 90 bp GGCCATCCTTCGAGAGTCATTGGAGAAAGCGAAAGAGTGGACAGATaGAGAGTGACCCTTCAGTTCAAAGGCTCGCAGCACCTCCTGGAA +
Preference number: 1 (lower is better)
Translates to: GHPSRVIGESERVDR*RVTLQFKGSQHLLE
Trigger: TTCCAGGAGGTGCTGCGAGCCTTTGAACTGAAGGGTCACTCTGCATCTGTCCACTCTTTCGCTTTCTCCAATGACTCTCGAAGGATGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR GCA 90 bp CAAGGACTGAATCGCACTGACAAGTCTGCCAACAGAAAGGAAAAATaGTTGCAGCACAAGAGGGACCAGCCCACACCCAGAGCCTGCCAA +
Preference number: 1 (lower is better)
Translates to: QGLNRTDKSANRKEK*LQHKRDQPTPRACQ
Trigger: TTGGCAGGCTCTGGGTGTGGGCTGGTCCCTCTTGTGCTGCAAGCATTTTTCCTTTCTGTTGGCAGACTTGTCAGTGCGATTCAGTCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR GCA 90 bp AGTGCTGACTCGTGGTTCTTCAACCTGCCAAGCCCTTGGGCTGCATaGATGCACTACCACACCTTGTGTAGAATCAGCAGATCAATGCCG +
Preference number: 1 (lower is better)
Translates to: SADSWFFNLPSPWAA*MHYHTLCRISRSMP
Trigger: CGGCATTGATCTGCTGATTCTACACAAGGTGTGGTAGTGCATGCATGCAGCCCAAGGGCTTGGCAGGTTGAAGAACCACGAGTCAGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR CCA 90 bp GAACTCTCCTTTCTTCCCGAAACAGACCTCCCAGACCTTCACATCTaGGGTGAAGCCACACGAACCCACAAACCTGCTACATGGGGAGAT +
Preference number: 1 (lower is better)
Translates to: ELSFLPETDLPDLHI*GEATRTHKPATWGD
Trigger: ATCTCCCCATGTAGCAGGTTTGTGGGTTCGTGTGGCTTCACCCCAGATGTGAAGGTCTGGGAGGTCTGTTTCGGGAAGAAAGGAGAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR CCA 90 bp ATATACTACGGGACAGTGGCTAAGACCGGGATGGTAACAGAAGAGTaGGAGAGCTGCAGATGCTGCAGGCCATCTGCATGTAGCAGCAGT +
Preference number: 1 (lower is better)
Translates to: IYYGTVAKTGMVTEE*ESCRCCRPSACSSS
Trigger: ACTGCTGCTACATGCAGATGGCCTGCAGCATCTGCAGCTCTCCCACTCTTCTGTTACCATCCCGGTCTTAGCCACTGTCCCGTAGTATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR GCA 90 bp CCTTCCCTGTGCAGCCACGGCACCAGTTACTTCTCAAGACACGAGTaGAGAAGCAAGAGAACGCATTTTCAGATGCTTTCCGACAACCAG +
Preference number: 1 (lower is better)
Translates to: PSLCSHGTSYFSRHE*RSKRTHFQMLSDNQ
Trigger: CTGGTTGTCGGAAAGCATCTGAAAATGCGTTCTCTTGCTTCTGCACTCGTGTCTTGAGAAGTAACTGGTGCCGTGGCTGCACAGGGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR CCA 90 bp TCCATGTCCCATCCTTGGAGACGGAGGCCATCCTTCGAGAGTCATTaGAGAAAGCGAAAGAGTGGACAGATGCAGAGTGACCCTTCAGTT +
Preference number: 1 (lower is better)
Translates to: SMSHPWRRRPSFESH*RKRKSGQMQSDPSV
Trigger: AACTGAAGGGTCACTCTGCATCTGTCCACTCTTTCGCTTTCTCCAATGACTCTCGAAGGATGGCCTCCGTCTCCAAGGATGGGACATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR GCA 90 bp CAGGGTTTGGTGCAGTCCACAAGGATGCCTCCTTGCAAAGTACAGTaGCAGCATCTAACTTCTCTGCAACTGGCAACTTCTGCGGCTTAT +
Preference number: 1 (lower is better)
Translates to: QGLVQSTRMPPCKVQ*QHLTSLQLATSAAY
Trigger: ATAAGCCGCAGAAGTTGCCAGTTGCAGAGAAGTTAGATGCTGGCACTGTACTTTGCAAGGAGGCATCCTTGTGGACTGCACCAAACCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR CCA 90 bp TCTTGTACTCCACATCTGTGTCCCATAGCTTCCATGTCCCATCCTTaGAGACGGAGGCCATCCTTCGAGAGTCATTGGAGAAAGCGAAAG +
Preference number: 1 (lower is better)
Translates to: SCTPHLCPIASMSHP*RRRPSFESHWRKRK
Trigger: CTTTCGCTTTCTCCAATGACTCTCGAAGGATGGCCTCCGTCTCCAAGGATGGGACATGGAAGCTATGGGACACAGATGTGGAGTACAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR CCA 90 bp GCTGAGGCTTCTCCTTACGAACCCGCTGATTCTGCTTCTGCTTCTTaGATCCTGACTTCTTGGGTTCGTTTTCTTTCTGACCTGGGGTCT +
Preference number: 1 (lower is better)
Translates to: AEASPYEPADSASAS*ILTSWVRFLSDLGS
Trigger: AGACCCCAGGTCAGAAAGAAAACGAACCCAAGAAGTCAGGATCCAAGAAGCAGAAGCAGAATCAGCGGGTTCGTAAGGAGAAGCCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000139565.8
3UTR CCA 90 bp TCTTCAGGCGTGTCAGGATTTTTCACTGGTCTGGAGCTTGCTGACTaGGTCACACTGGCTGGAGTTACAATTGTCAACCACCATTGTGGG +
Preference number: 1 (lower is better)
Translates to: SSGVSGFFTGLELAD*VTLAGVTIVNHHCG
Trigger: CCCACAATGGTGGTTGACAATTGTAACTCCAGCCAGTGTGACCCAGTCAGCAAGCTCCAGACCAGTGAAAAATCCTGACACGCCTGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR CCA 90 bp ATTGAACTCAGGACCTTTGGAAGAGCAGTCAGTGCTCTTAACCGCTaGGCCATCTCTTCAGGCGTGTCAGGATTTTTCACTGGTCTGGAG +
Preference number: 1 (lower is better)
Translates to: IELRTFGRAVSALNR*AISSGVSGFFTGLE
Trigger: CTCCAGACCAGTGAAAAATCCTGACACGCCTGAAGAGATGGCCCAGCGGTTAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR TCA 90 bp TTCTCAAGGCACGGGAACCAAACCACCATGTTTATCCAAGATGAATaGGCAAGCAGAGCCCTAGGAAACTTGGCTTCACAAGGGCTGTGG +
Preference number: 1 (lower is better)
Translates to: FSRHGNQTTMFIQDE*ASRALGNLASQGLW
Trigger: CCACAGCCCTTGTGAAGCCAAGTTTCCTAGGGCTCTGCTTGCTCATTCATCTTGGATAAACATGGTGGTTTGGTTCCCGTGCCTTGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR GCA 90 bp GGTGAAGCCACACGAACCCACAAACCTGCTACATGGGGAGATAACTaGGTGACTGTTGTTCATCTGGTTAGTGTTGATCGTGGAAAGCAC +
Preference number: 1 (lower is better)
Translates to: GEATRTHKPATWGDN*VTVVHLVSVDRGKH
Trigger: GTGCTTTCCACGATCAACACTAACCAGATGAACAACAGTCACGCAGTTATCTCCCCATGTAGCAGGTTTGTGGGTTCGTGTGGCTTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR CCA 90 bp TATGCCAAAGGGAAAGCAGAGACCATAGCTATAGGGCTTGAGAGATaGCTTAATGGTTGGGAGCACTGGCTGCTCTTCCAAAGGACCTGT +
Preference number: 1 (lower is better)
Translates to: YAKGKAETIAIGLER*LNGWEHWLLFQRTC
Trigger: ACAGGTCCTTTGGAAGAGCAGCCAGTGCTCCCAACCATTAAGCCATCTCTCAAGCCCTATAGCTATGGTCTCTGCTTTCCCTTTGGCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR GCA 90 bp CAAGGGTTCTGTTCCAACGCATTCTTCAGCAATTTCACAAACTGCTaGAAAGAGGCTTGGAGGCAAAGCATTTGTCCAGTGAGGGCTAGG +
Preference number: 1 (lower is better)
Translates to: QGFCSNAFFSNFTNC*KEAWRQSICPVRAR
Trigger: CCTAGCCCTCACTGGACAAATGCTTTGCCTCCAAGCCTCTTTGCAGCAGTTTGTGAAATTGCTGAAGAATGCGTTGGAACAGAACCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR CCA 90 bp GCATCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGAATTGAACTCAGGACCTTTGGAAGAGCAGTCAGTGCTCTTA +
Preference number: 1 (lower is better)
Translates to: ASDPITDGCEPPCGC*ELNSGPLEEQSVLL
Trigger: TAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR TCA 90 bp TTACTTCTCAAGGCACGGGAACCAAACCACCATGTTTATCCAAGATaGATGAGCAAGCAGAGCCCTAGGAAACTTGGCTTCACAAGGGCT +
Preference number: 1 (lower is better)
Translates to: LLLKAREPNHHVYPR*MSKQSPRKLGFTRA
Trigger: AGCCCTTGTGAAGCCAAGTTTCCTAGGGCTCTGCTTGCTCATTCATCTTGGATAAACATGGTGGTTTGGTTCCCGTGCCTTGAGAAGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR GCA 90 bp CAACAAGGGTTCTGTTCCAACGCATTCTTCAGCAATTTCACAAACTaGTGCAAAGAGGCTTGGAGGCAAAGCATTTGTCCAGTGAGGGCT +
Preference number: 1 (lower is better)
Translates to: QQGFCSNAFFSNFTN*CKEAWRQSICPVRA
Trigger: AGCCCTCACTGGACAAATGCTTTGCCTCCAAGCCTCTTTGCAGCAGTTTGTGAAATTGCTGAAGAATGCGTTGGAACAGAACCCTTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR CCA 90 bp AAAGCAGAGACCATAGCTATAGGGCTTGAGAGATGGCTTAATGGTTaGGAGCACTGGCTGCTCTTCCAAAGGACCTGTGTTCAATTCTCA +
Preference number: 1 (lower is better)
Translates to: KAETIAIGLERWLNG*EHWLLFQRTCVQFS
Trigger: TGAGAATTGAACACAGGTCCTTTGGAAGAGCAGCCAGTGCTCCCAACCATTAAGCCATCTCTCAAGCCCTATAGCTATGGTCTCTGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR TCA 90 bp ATGCCCAAATCGCAAGGACCCCAAAGACCACCAGGGAGTCAATTCTaGTGTAAACACATATGGGCTTTTATTAGGAGCTCAAGAGCACTC +
Preference number: 1 (lower is better)
Translates to: MPKSQGPQRPPGSQF*CKHIWAFIRSSRAL
Trigger: GAGTGCTCTTGAGCTCCTAATAAAAGCCCATATGTGTTTACATCAGAATTGACTCCCTGGTGGTCTTTGGGGTCCTTGCGATTTGGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR TCA 90 bp CATGGATCTCAAAAGTCGTGCCCTGAACACAAGCTACAGAAGACCTaGGTCCAGATTGTTTGTAGAGACAAGTTGGGGAGAGTACTGAGT +
Preference number: 1 (lower is better)
Translates to: HGSQKSCPEHKLQKT*VQIVCRDKLGRVLS
Trigger: ACTCAGTACTCTCCCCAACTTGTCTCTACAAACAATCTGGACTCAGGTCTTCTGTAGCTTGTGTTCAGGGCACGACTTTTGAGATCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR GCA 90 bp AGCAGAGCTATTTGTCTACCTGACCCTGGCTTCCATTCCCAGGACTaGAAAAGGAAAAGTAAGGAAGAATCCTTCAGCACCAATGAGACT +
Preference number: 1 (lower is better)
Translates to: SRAICLPDPGFHSQD*KRKSKEESFSTNET
Trigger: AGTCTCATTGGTGCTGAAGGATTCTTCCTTACTTTTCCTTTTGCAGTCCTGGGAATGGAAGCCAGGGTCAGGTAGACAAATAGCTCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR TCA 90 bp AATGAATACATTCATGAACTGTGTTTTAGACAGTCTATGCAGTGCTaGCTCGTGGTTCTTCAACCTGCCAAGCCCTTGGGCTGCATGCAT +
Preference number: 1 (lower is better)
Translates to: NEYIHELCFRQSMQC*LVVLQPAKPLGCMH
Trigger: ATGCATGCAGCCCAAGGGCTTGGCAGGTTGAAGAACCACGAGTCAGCACTGCATAGACTGTCTAAAACACAGTTCATGAATGTATTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR TCA 90 bp AAGTATTTTGAGTGTGCAGGATATGTGTGGCCAAAGAGCAGTCACTaGTGTCTTTCTATCCACATGTGGGACCTGGGGATTAAACAGGTT +
Preference number: 1 (lower is better)
Translates to: KYFECAGYVWPKSSH*CLSIHMWDLGIKQV
Trigger: AACCTGTTTAATCCCCAGGTCCCACATGTGGATAGAAAGACATCAGTGACTGCTCTTTGGCCACACATATCCTGCACACTCAAAATACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR CCA 90 bp AAGTCATGTGCCACCACTGCCTGGCCAGCTACAATAATCTTGTATTaGTGTGTGTATACATACACACACACATATATGTATACACACACA +
Preference number: 1 (lower is better)
Translates to: KSCATTAWPATIILY*CVYTYTHTYMYTHT
Trigger: TGTGTGTGTATACATATATGTGTGTGTGTATGTATACACACACCAATACAAGATTATTGTAGCTGGCCAGGCAGTGGTGGCACATGACTT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR-3UTR GCA 90 bp GCTGCTGGGCCAGACAGCCAGACCCATCTGGAGCCAGAGTCACTTCTTCAGGGCCGCTTCAGGAGGCTCTaGATCTCCTCCACCACAGCC +
Preference number: 2 (lower is better)
Translates to: AAGPDSQTHLEPESLLQGRFRRL*ISSTTA
Trigger: GGCTGTGGTGGAGGAGATGCAGAGCCTCCTGAAGCG...GCCCTGAAGAAGTGACTCTGGCTCCAGATGGGTCTGGCTGTCTGGCCCAGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR CAA 90 bp AGACCCATCTGGAGCCAGAGTCACTTCTTCAGGGCACCCAGGCTCTaGAGGGCCTCTTGGGCCTGGGTTAGCTGTTGCTGCAGCCTCTGG +
Preference number: 2 (lower is better)
Translates to: RPIWSQSHFFRAPRL*RASWAWVSCCCSLW
Trigger: CCAGAGGCTGCAGCAACAGCTAACCCAGGCCCAAGAGGCCCTCAAGAGCCTGGGTGCCCTGAAGAAGTGACTCTGGCTCCAGATGGGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR-3UTR TCA 90 bp ATCAGGGGAGAGTGCCAGGCGGCAAGGCATGGTGCTCGCCTCTTCAAAGCGGCCCCTTCACATCTGGGGTaGAGCCACACGAACCCACAA +
Preference number: 2 (lower is better)
Translates to: IRGECQAARHGARLFKAAPSHLG*SHTNPQ
Trigger: TTGTGGGTTCGTGTGGCTTCACCCCAGATGTGAAGG...GGCCGCTTTGAAGAGGCGAGCACCATGCCTTGCCGCCTGGCACTCTCCCCTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR-3UTR GCA 90 bp AGCGTACCAAGGTGGCATGGTCCAGCTCCACGTTGGCTCTCATGCTGCGGTGCTGTGGCTCTTCAGTGCTaGAGCCAGAAGGGGGTGCGT +
Preference number: 2 (lower is better)
Translates to: SVPRWHGPAPRWLSCCGAVALQC*SQKGVR
Trigger: ACGCACCCCCTTCTGGCTGCAGCACTGAAGAGCCAC...AGCACCGCAGCATGAGAGCCAACGTGGAGCTGGACCATGCCACCTTGGTACGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000139565.8
3UTR-3UTR CCA 90 bp CCGCACTGCACGGTCCCCACAGGAGGCCAGGAAGCGGCCAGTGATGTCAAAAGTGCTCGCAGCACCTCCTaGAACTCTCCTTTCTTCCCG +
Preference number: 2 (lower is better)
Translates to: PHCTVPTGGQEAASDVKSARSTS*NSPFFP
Trigger: CGGGAAGAAAGGAGAGTTCCAGGAGGTGCTGCGAGC...ACTTTTGACATCACTGGCCGCTTCCTGGCCTCCTGTGGGGACCGTGCAGTGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR-3UTR TCA 90 bp GTCATCCGCACAGGTGGCCAGATACTTGCCGTTGCTGCTGAAGTCCATGCAAGACCAGAAGGGGGTGCGTaGAGCTGTGCTGCTGAGGCT +
Preference number: 2 (lower is better)
Translates to: VIRTGGQILAVAAEVHARPEGGA*SCAAEA
Trigger: AGCCTCAGCAGCACAGCTTCACGCACCCCCTTCTGG...TCTTGCATGGACTTCAGCAGCAACGGCAAGTATCTGGCCACCTGTGCGGATGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000139565.8
ENSMUST00000201780.2
3UTR-3UTR GCA 90 bp GGGTTTTTCTGTGTAGCCCAGGTGGTGTGGAACTCACTCTGTAGACTAGGCTGGGGCTCCCTCCCACTGTaGACCCAGGACACACGGCCA +
Preference number: 2 (lower is better)
Translates to: GFFCVAQVVWNSLCRLGWGSLPL*TQDTRP
Trigger: TGGCCGTGTGTCCTGGGTGCACAGTGGGAGGGAGCC...CCAGCCTAGTCTACAGAGTGAGTTCCACACCACCTGGGCTACACAGAAAAACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR-3UTR CCA 90 bp GAGCTGCTGGGCCAGACAGCCAGACCCATCTGGAGCCAGAGTCACTTCTTCAGGCCAGACCTTCACATCTaGGGTGAAGCCACACGAACC +
Preference number: 2 (lower is better)
Translates to: ELLGQTARPIWSQSHFFRPDLHI*GEATRT
Trigger: GGTTCGTGTGGCTTCACCCCAGATGTGAAGGTCTGG...CCTGAAGAAGTGACTCTGGCTCCAGATGGGTCTGGCTGTCTGGCCCAGCAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR-3UTR CCA 90 bp GAGCTGCTGGGCCAGACAGCCAGACCCATCTGGAGCCAGAGTCACTTCTTCAGGTGTTGCTGCAGCCTCTaGCGGGTACTTTCGCTGGAT +
Preference number: 2 (lower is better)
Translates to: ELLGQTARPIWSQSHFFRCCCSL*RVLSLD
Trigger: ATCCAGCGAAAGTACCCGCCAGAGGCTGCAGCAACA...CCTGAAGAAGTGACTCTGGCTCCAGATGGGTCTGGCTGTCTGGCCCAGCAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR-3UTR CCA 90 bp GAGGGTGTCCCCATTGGCCAGCCAAACAATGAAGGCTCTGCAGTCAGGGCTGAAGGTCCAGCTCCACGTTaGCTCTCATGCTGCGGTGCT +
Preference number: 2 (lower is better)
Translates to: EGVPIGQPNNEGSAVRAEGPAPR*LSCCGA
Trigger: AGCACCGCAGCATGAGAGCCAACGTGGAGCTGGACC...TTCAGCCCTGACTGCAGAGCCTTCATTGTTTGGCTGGCCAATGGGGACACCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000139565.8
3UTR CAA 90 bp TCAGCACCAATGAGACTGATGAGCTGCGCCCTCCCCCGTCAGGGTTaGGTGCAGTCCACAAGGATGCCTCCTTGCAAAGTACAGTGCCAG +
Preference number: 2 (lower is better)
Translates to: SAPMRLMSCALPRQG*VQSTRMPPCKVQCQ
Trigger: CTGGCACTGTACTTTGCAAGGAGGCATCCTTGTGGACTGCACCAAACCCTGACGGGGGAGGGCGCAGCTCATCAGTCTCATTGGTGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR-3UTR TCA 90 bp CATGCTGCGGTGCTCCCGCTGAAGGAAATCTTTAGTGCTCCAGATACGGACAGTCCAGAAGGGGGTGCGTaGAGCTGTGCTGCTGAGGCT +
Preference number: 2 (lower is better)
Translates to: HAAVLPLKEIFSAPDTDSPEGGA*SCAAEA
Trigger: AGCCTCAGCAGCACAGCTTCACGCACCCCCTTCTGG...ACTGTCCGTATCTGGAGCACTAAAGATTTCCTTCAGCGGGAGCACCGCAGCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000139565.8
3UTR-3UTR TCA 90 bp TGTGCACCCAGGACACACGGCCACCAGCCCAGTGCAGTCTCTACCGTTTCCTTCAAGCAGGCCCTGAAGTaGTGGGTTCAAGAAGTCCCT +
Preference number: 2 (lower is better)
Translates to: CAPRTHGHQPSAVSTVSFKQALK*WVQEVP
Trigger: AGGGACTTCTTGAACCCATCACTTCAGGGCCTGCTT...GAAGGAAACGGTAGAGACTGCACTGGGCTGGTGGCCGTGTGTCCTGGGTGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR-3UTR CCA 90 bp AGGGAAATCCTCTGGTGTGGCCGTGAAAGTAAAGCCCCCATCTTCCCGCTTGGTGGACATAGGTGGTGGTaGTGGTGGGAGGTGTCCCAG +
Preference number: 2 (lower is better)
Translates to: REILWCGRESKAPIFPLGGHRWW*WWEVSQ
Trigger: CTGGGACACCTCCCACCACCACCACCACCTATGTCC...ACCAAGCGGGAAGATGGGGGCTTTACTTTCACGGCCACACCAGAGGATTTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000139565.8
3UTR CAA 90 bp GCTGTGGCTGAGGAGAGTCTTCGTCTAGCATCTCCCAGTGAGGGGTaGAGGCATGGCTCACCAGCAGAGCTATTTGTCTACCTGACCCTG +
Preference number: 2 (lower is better)
Translates to: AVAEESLRLASPSEG*RHGSPAELFVYLTL
Trigger: CAGGGTCAGGTAGACAAATAGCTCTGCTGGTGAGCCATGCCTCAACCCCTCACTGGGAGATGCTAGACGAAGACTCTCCTCAGCCACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR-3UTR GCA 90 bp GTCATCCGCACAGGTGGCCAGATACTTGCCGTTGCTGCTGAAGTCCATGCAAGAACTGTGGCTCTTCAGTaGTGCAGCCAGAAGGGGGTG +
Preference number: 2 (lower is better)
Translates to: VIRTGGQILAVAAEVHARTVALQ*CSQKGV
Trigger: CACCCCCTTCTGGCTGCAGCACTGAAGAGCCACAGT...TCTTGCATGGACTTCAGCAGCAACGGCAAGTATCTGGCCACCTGTGCGGATGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000139565.8
ENSMUST00000201780.2
3UTR-3UTR TCA 90 bp AGGGAAATCCTCTGGTGTGGCCGTGAAAGTAAAGCCCCCATCTTCCCGCTTGGTCTGCGGTGCTCCCGCTaGAGGAAATCTTTAGTGCTC +
Preference number: 2 (lower is better)
Translates to: REILWCGRESKAPIFPLGLRCSR*RKSLVL
Trigger: GAGCACTAAAGATTTCCTTCAGCGGGAGCACCGCAG...ACCAAGCGGGAAGATGGGGGCTTTACTTTCACGGCCACACCAGAGGATTTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000139565.8
3UTR-3UTR GCA 90 bp TGTGCACCCAGGACACACGGCCACCAGCCCAGTGCAGTCTCTACCGTTTCCTTCTGGACAGACCTGTTATaGTCCATGTGTGGGAGCATT +
Preference number: 2 (lower is better)
Translates to: CAPRTHGHQPSAVSTVSFWTDLL*SMCGSI
Trigger: AATGCTCCCACACATGGAGCATAACAGGTCTGTCCA...GAAGGAAACGGTAGAGACTGCACTGGGCTGGTGGCCGTGTGTCCTGGGTGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR CAA 90 bp CTCCAGATACGGACAGTGCGGTCATCCGCACAGGTGGCCAGATACTaGCCGTTGCTGCTGAAGTCCATGCAAGATATATTCCCACTGTGG +
Preference number: 2 (lower is better)
Translates to: LQIRTVRSSAQVARY*PLLLKSMQDIFPLW
Trigger: CCACAGTGGGAATATATCTTGCATGGACTTCAGCAGCAACGGCAAGTATCTGGCCACCTGTGCGGATGACCGCACTGTCCGTATCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000139565.8
3UTR CAA 90 bp CCATCTTCCCGCTTGGTCATCTTAAAAACACGGAGGGTGTCCCCATaGGCCAGCCAAACAATGAAGGCTCTGCAGTCAGGGCTGAAGCGT +
Preference number: 2 (lower is better)
Translates to: PSSRLVILKTRRVSP*ASQTMKALQSGLKR
Trigger: ACGCTTCAGCCCTGACTGCAGAGCCTTCATTGTTTGGCTGGCCAATGGGGACACCCTCCGTGTTTTTAAGATGACCAAGCGGGAAGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000139565.8
3UTR CAA 90 bp ACATCACAGACACCAGCCTCTAGGTCCTCCCACCAGCTTTTACCCTaGGCAGCAGGCCTAGTCTTGTCTGTCTGTGTTAGCCAGCATCAC +
Preference number: 2 (lower is better)
Translates to: TSQTPASRSSHQLLP*AAGLVLSVCVSQHH
Trigger: GTGATGCTGGCTAACACAGACAGACAAGACTAGGCCTGCTGCCAAGGGTAAAAGCTGGTGGGAGGACCTAGAGGCTGGTGTCTGTGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR CAA 90 bp TGGCCAGTTTGGGAACAGACTTCTGACTTCAGCAGCTCAGCATTCTaGCTAGGGTTCACTGCCTTCCCTGTGCAGCCACGGCACCAGTTA +
Preference number: 2 (lower is better)
Translates to: WPVWEQTSDFSSSAF*LGFTAFPVQPRHQL
Trigger: TAACTGGTGCCGTGGCTGCACAGGGAAGGCAGTGAACCCTAGCAAGAATGCTGAGCTGCTGAAGTCAGAAGTCTGTTCCCAAACTGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR-3UTR TCA 90 bp TGTGCACCCAGGACACACGGCCACCAGCCCAGTGCAGTCTCTACCGTTTCCTTCTTTATCCAAGATGAATaGGCAAGCAGAGCCCTAGGA +
Preference number: 2 (lower is better)
Translates to: CAPRTHGHQPSAVSTVSFFIQDE*ASRALG
Trigger: TCCTAGGGCTCTGCTTGCTCATTCATCTTGGATAAA...GAAGGAAACGGTAGAGACTGCACTGGGCTGGTGGCCGTGTGTCCTGGGTGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR CAA 90 bp ATACGGACAGTGCGGTCATCCGCACAGGTGGCCAGATACTTGCCGTaGCTGCTGAAGTCCATGCAAGATATATTCCCACTGTGGCTCTTC +
Preference number: 2 (lower is better)
Translates to: IRTVRSSAQVARYLP*LLKSMQDIFPLWLF
Trigger: GAAGAGCCACAGTGGGAATATATCTTGCATGGACTTCAGCAGCAACGGCAAGTATCTGGCCACCTGTGCGGATGACCGCACTGTCCGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000139565.8
ENSMUST00000201780.2
3UTR CAA 90 bp TTCAACCTGCCAAGCCCTTGGGCTGCATGCATGCACTACCACACCTaGTGTAGAATCAGCAGATCAATGCCGCCTCTACTCTCGAGGATC +
Preference number: 2 (lower is better)
Translates to: FNLPSPWAACMHYHT*CRISRSMPPLLSRI
Trigger: GATCCTCGAGAGTAGAGGCGGCATTGATCTGCTGATTCTACACAAGGTGTGGTAGTGCATGCATGCAGCCCAAGGGCTTGGCAGGTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR CAA 90 bp GGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCTTaGGAAGAGCAGTCAGTGCTCTTAACCGCTGGGCCATCTCTTCAG +
Preference number: 2 (lower is better)
Translates to: GCEPPCGCWELNSGP*EEQSVLLTAGPSLQ
Trigger: CTGAAGAGATGGCCCAGCGGTTAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR-3UTR GCA 90 bp ATTCCACAAGTGGGGAGACGAACTCTGGCAGCCTCTGTGATTACAGGACTCCAGTTAACCCCCACTCACTaGCCTTCTCTGACACTGCAG +
Preference number: 2 (lower is better)
Translates to: IPQVGRRTLAASVITGLQLTPTH*PSLTLQ
Trigger: CTGCAGTGTCAGAGAAGGGCAGTGAGTGGGGGTTAA...CTGGAGTCCTGTAATCACAGAGGCTGCCAGAGTTCGTCTCCCCACTTGTGGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR-3UTR CCA 90 bp TGTGCACCCAGGACACACGGCCACCAGCCCAGTGCAGTCTCTACCGTTTCCTTCGTCTTCAAATGTACATaGCTGAGACCCAGTCTCTTA +
Preference number: 2 (lower is better)
Translates to: CAPRTHGHQPSAVSTVSFVFKCT*LRPSLL
Trigger: TAAGAGACTGGGTCTCAGCCATGTACATTTGAAGAC...GAAGGAAACGGTAGAGACTGCACTGGGCTGGTGGCCGTGTGTCCTGGGTGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR CAA 90 bp AATTCATACAAAAGGAAAAGCGGCAGGGCACCAGGAGGGACAGGATaGGTGGAAATGGCTACTTCGGAGGGAGTTGGTGAGGTGGCAACT +
Preference number: 2 (lower is better)
Translates to: NSYKRKSGRAPGGTG*VEMATSEGVGEVAT
Trigger: AGTTGCCACCTCACCAACTCCCTCCGAAGTAGCCATTTCCACCAATCCTGTCCCTCCTGGTGCCCTGCCGCTTTTCCTTTTGTATGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR-3UTR TCA 90 bp TGCCTGCCATCTTCCTCACCAACAAAGACCAGTCCAAGCAGTCTTCAAATGTACAGTCCAAGCTGGCCTTaGACCCCTGATCCTCTCACC +
Preference number: 2 (lower is better)
Translates to: CLPSSSPTKTSPSSLQMYSPSWP*TPDPLT
Trigger: GGTGAGAGGATCAGGGGTTCAAGGCCAGCTTGGACT...GTACATTTGAAGACTGCTTGGACTGGTCTTTGTTGGTGAGGAAGATGGCAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR-3UTR GCA 90 bp TCCACATCTGTGTCCCATAGCTTCCATGTCCCATCCTTGGAGACGGAGGCCATCGAAAGAGTGGACAGATaGAGAGTGACCCTTCAGTTC +
Preference number: 2 (lower is better)
Translates to: STSVSHSFHVPSLETEAIERVDR*RVTLQF
Trigger: GAACTGAAGGGTCACTCTGCATCTGTCCACTCTTTC...GATGGCCTCCGTCTCCAAGGATGGGACATGGAAGCTATGGGACACAGATGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR-3UTR GCA 90 bp TGTGCACCCAGGACACACGGCCACCAGCCCAGTGCAGTCTCTACCGTTTCCTTCAACCATCAAAGGTTTTaGTCTGTCTGTCTTCTGTCT +
Preference number: 2 (lower is better)
Translates to: CAPRTHGHQPSAVSTVSFNHQRF*SVCLLS
Trigger: AGACAGAAGACAGACAGAGCAAAACCTTTGATGGTT...GAAGGAAACGGTAGAGACTGCACTGGGCTGGTGGCCGTGTGTCCTGGGTGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR-3UTR GCA 90 bp AAAACACAGGCGAAAGGACCTGTGTATGGTGGCACATGCCTTAAAACCAAGCACTCACTGCCTTCCCTGTaGAGCCACGGCACCAGTTAC +
Preference number: 2 (lower is better)
Translates to: KTQAKGPVYGGTCLKTKHSLPSL*SHGTSY
Trigger: GTAACTGGTGCCGTGGCTGCACAGGGAAGGCAGTGA...GTGCTTGGTTTTAAGGCATGTGCCACCATACACAGGTCCTTTCGCCTGTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR-3UTR CCA 90 bp ATTCCACAAGTGGGGAGACGAACTCTGGCAGCCTCTGTGATTACAGGACTCCAGCACCAGGAAGAAAACTaGGAGTTTCCTCCAGGTCTC +
Preference number: 2 (lower is better)
Translates to: IPQVGRRTLAASVITGLQHQEEN*EFPPGL
Trigger: GAGACCTGGAGGAAACTCCCAGTTTTCTTCCTGGTG...CTGGAGTCCTGTAATCACAGAGGCTGCCAGAGTTCGTCTCCCCACTTGTGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR CAA 90 bp GACCTGTGTTCAATTCTCAGCACCTACATGGCAGCTTGCAACTGTTaGGAACTCCAGTTCCAGGGCATCTGGCACCCTCACACAGACATA +
Preference number: 2 (lower is better)
Translates to: DLCSILSTYMAACNC*ELQFQGIWHPHTDI
Trigger: TATGTCTGTGTGAGGGTGCCAGATGCCCTGGAACTGGAGTTCCAAACAGTTGCAAGCTGCCATGTAGGTGCTGAGAATTGAACACAGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR CAA 90 bp TCTTCCAAAGGACCTGTGTTCAATTCTCAGCACCTACATGGCAGCTaGCAACTGTTTGGAACTCCAGTTCCAGGGCATCTGGCACCCTCA +
Preference number: 2 (lower is better)
Translates to: SSKGPVFNSQHLHGS*QLFGTPVPGHLAPS
Trigger: TGAGGGTGCCAGATGCCCTGGAACTGGAGTTCCAAACAGTTGCAAGCTGCCATGTAGGTGCTGAGAATTGAACACAGGTCCTTTGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR-3UTR TCA 90 bp AAGTCCCTGAGAGAGGAACACCCTTTTGCGATGGCATTACTTCTCAAGGCACGGAGGTTTCTCTCCATATaGATGGAGCCCAGGAGGACT +
Preference number: 2 (lower is better)
Translates to: KSLREEHPFAMALLLKARRFLSI*MEPRRT
Trigger: AGTCCTCCTGGGCTCCATTCATATGGAGAGAAACCT...CCGTGCCTTGAGAAGTAATGCCATCGCAAAAGGGTGTTCCTCTCTCAGGGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR-3UTR TCA 90 bp AAAACACAGGCGAAAGGACCTGTGTATGGTGGCACATGCCTTAAAACCAAGCACGGTAGAAGGAGAGGGTaGCAAGGGAGCCATCAAGGT +
Preference number: 2 (lower is better)
Translates to: KTQAKGPVYGGTCLKTKHGRRRG*QGSHQG
Trigger: ACCTTGATGGCTCCCTTGTCACCCTCTCCTTCTACC...GTGCTTGGTTTTAAGGCATGTGCCACCATACACAGGTCCTTTCGCCTGTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR-3UTR GCA 90 bp AAAACACAGGCGAAAGGACCTGTGTATGGTGGCACATGCCTTAAAACCAAGCACGCCTCACAGCATCTTTaGAGGAAGGCCACAGAGAGC +
Preference number: 2 (lower is better)
Translates to: KTQAKGPVYGGTCLKTKHASQHL*RKATES
Trigger: GCTCTCTGTGGCCTTCCTGCAAAGATGCTGTGAGGC...GTGCTTGGTTTTAAGGCATGTGCCACCATACACAGGTCCTTTCGCCTGTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR-3UTR GCA 90 bp GCCTCTAGGTCCTCCCACCAGCTTTTACCCTTGGCAGCAGGCCTAGTCTTGTCTAGAGGAACACCCTTTTaGGATGGCATTACTTCTCAA +
Preference number: 2 (lower is better)
Translates to: ASRSSHQLLPLAAGLVLSRGTPF*DGITSQ
Trigger: TTGAGAAGTAATGCCATCGCAAAAGGGTGTTCCTCT...AGACAAGACTAGGCCTGCTGCCAAGGGTAAAAGCTGGTGGGAGGACCTAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR CAA 90 bp TTCTTGTACTCCACATCTGTGTCCCATAGCTTCCATGTCCCATCCTaGGAGACGGAGGCCATCCTTCGAGAGTCATTGGAGAAAGCGAAA +
Preference number: 2 (lower is better)
Translates to: FLYSTSVSHSFHVPS*ETEAILRESLEKAK
Trigger: TTTCGCTTTCTCCAATGACTCTCGAAGGATGGCCTCCGTCTCCAAGGATGGGACATGGAAGCTATGGGACACAGATGTGGAGTACAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR-3UTR TCA 90 bp ATTCCACAAGTGGGGAGACGAACTCTGGCAGCCTCTGTGATTACAGGACTCCAGCCCTGCAGCTGTAAATaGACAAAAAGCACATCACAG +
Preference number: 2 (lower is better)
Translates to: IPQVGRRTLAASVITGLQPCSCK*TKSTSQ
Trigger: CTGTGATGTGCTTTTTGTTCATTTACAGCTGCAGGG...CTGGAGTCCTGTAATCACAGAGGCTGCCAGAGTTCGTCTCCCCACTTGTGGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR-3UTR TCA 90 bp GAACAAAAAGCACATCACAGACACCAGCCTCTAGGTCCTCCCACCAGCTTTTACCTTCTCCGTGCTAGATaGAGACAGATTCTACCCCTA +
Preference number: 2 (lower is better)
Translates to: EQKAHHRHQPLGPPTSFYLLRAR*RQILPL
Trigger: TAGGGGTAGAATCTGTCTTCATCTAGCACGGAGAAG...GTAAAAGCTGGTGGGAGGACCTAGAGGCTGGTGTCTGTGATGTGCTTTTTGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR-3UTR GCA 90 bp TGGGAACAGACTTCTGACTTCAGCAGCTCAGCATTCTTGCTAGGGTTCACTGCCCCTTGCAAAGTACAGTaGCAGCATCTAACTTCTCTG +
Preference number: 2 (lower is better)
Translates to: WEQTSDFSSSAFLLGFTAPCKVQ*QHLTSL
Trigger: CAGAGAAGTTAGATGCTGGCACTGTACTTTGCAAGG...GGCAGTGAACCCTAGCAAGAATGCTGAGCTGCTGAAGTCAGAAGTCTGTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR-3UTR GCA 90 bp ATTCCACAAGTGGGGAGACGAACTCTGGCAGCCTCTGTGATTACAGGACTCCAGAATTTCACAAACTGCTaGAAAGAGGCTTGGAGGCAA +
Preference number: 2 (lower is better)
Translates to: IPQVGRRTLAASVITGLQNFTNC*KEAWRQ
Trigger: TTGCCTCCAAGCCTCTTTGCAGCAGTTTGTGAAATT...CTGGAGTCCTGTAATCACAGAGGCTGCCAGAGTTCGTCTCCCCACTTGTGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR-3UTR GCA 90 bp TGGGAACAGACTTCTGACTTCAGCAGCTCAGCATTCTTGCTAGGGTTCACTGCCAGCAATTTCACAAACTaGTGCAAAGAGGCTTGGAGG +
Preference number: 2 (lower is better)
Translates to: WEQTSDFSSSAFLLGFTASNFTN*CKEAWR
Trigger: CCTCCAAGCCTCTTTGCAGCAGTTTGTGAAATTGCT...GGCAGTGAACCCTAGCAAGAATGCTGAGCTGCTGAAGTCAGAAGTCTGTTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR-3UTR GCA 90 bp GGGTTTTTCTGTGTAGCCCAGGTGGTGTGGAACTCACTCTGTAGACTAGGCTGGATTTCTGCTGTAATTTaGAGGAACCAAACACAGGGG +
Preference number: 2 (lower is better)
Translates to: GFFCVAQVVWNSLCRLGWISAVI*RNQTQG
Trigger: CCCCTGTGTTTGGTTCCTGCAAATTACAGCAGAAAT...CCAGCCTAGTCTACAGAGTGAGTTCCACACCACCTGGGCTACACAGAAAAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR-3UTR GCA 90 bp GGGTTTTTCTGTGTAGCCCAGGTGGTGTGGAACTCACTCTGTAGACTAGGCTGGGATATTACAGACCAATaGCAACAAAGACCAGTCCTT +
Preference number: 2 (lower is better)
Translates to: GFFCVAQVVWNSLCRLGWDITDQ*QQRPVL
Trigger: AAGGACTGGTCTTTGTTGGCATTGGTCTGTAATATC...CCAGCCTAGTCTACAGAGTGAGTTCCACACCACCTGGGCTACACAGAAAAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR-3UTR GCA 90 bp GATTATGTTCTGTTCCATGAACATGGATCTCAAAAGTCGTGCCCTGAACACAAGGAAGAGTGGGAGAGCTaGAGATGCTGCAGGCCATCT +
Preference number: 2 (lower is better)
Translates to: DYVLFHEHGSQKSCPEHKEEWES*RCCRPS
Trigger: AGATGGCCTGCAGCATCTGCAGCTCTCCCACTCTTC...CTTGTGTTCAGGGCACGACTTTTGAGATCCATGTTCATGGAACAGAACATAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR-3UTR CCA 90 bp ATGAACTTCCCTGTGTCAGCAATGCCGATGTTGATGATGGGCGCTTTGTGTTTTGATATATTCCCACTGTaGCTCTTCAGTGCTGCAGCC +
Preference number: 2 (lower is better)
Translates to: MNFPVSAMPMLMMGALCFDIFPL*LFSAAA
Trigger: GGCTGCAGCACTGAAGAGCCACAGTGGGAATATATC...AAAACACAAAGCGCCCATCATCAACATCGGCATTGCTGACACAGGGAAGTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000139565.8
3UTR-3UTR CCA 90 bp GATTATGTTCTGTTCCATGAACATGGATCTCAAAAGTCGTGCCCTGAACACAAGCTGGAGCTTGCTGACTaGGTCACACTGGCTGGAGTT +
Preference number: 2 (lower is better)
Translates to: DYVLFHEHGSQKSCPEHKLELAD*VTLAGV
Trigger: AACTCCAGCCAGTGTGACCCAGTCAGCAAGCTCCAG...CTTGTGTTCAGGGCACGACTTTTGAGATCCATGTTCATGGAACAGAACATAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR-3UTR TCA 90 bp CTGGAGCTTGCTGACTGGGTCACACTGGCTGGAGTTACAATTGTCAACCACCATGGTCTTCAATATGGCTaGTCTTATCAGAAACCTGAA +
Preference number: 2 (lower is better)
Translates to: LELADWVTLAGVTIVNHHGLQYG*SYQKPE
Trigger: TTCAGGTTTCTGATAAGATCAGCCATATTGAAGACC...ATGGTGGTTGACAATTGTAACTCCAGCCAGTGTGACCCAGTCAGCAAGCTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR-3UTR CCA 90 bp GATGAACTTCCCTGTGTCAGCAATGCCGATGTTGATGATGGGCGCTTTGTGTTTTCTGCTTCTGCTTCTTaGATCCTGACTTCTTGGGTT +
Preference number: 2 (lower is better)
Translates to: DELPCVSNADVDDGRFVFSASAS*ILTSWV
Trigger: AACCCAAGAAGTCAGGATCCAAGAAGCAGAAGCAGA...AAACACAAAGCGCCCATCATCAACATCGGCATTGCTGACACAGGGAAGTTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000139565.8
3UTR-3UTR TCA 90 bp GATTATGTTCTGTTCCATGAACATGGATCTCAAAAGTCGTGCCCTGAACACAAGAGTGCTTTTAACCATTaGGCCACCTCTCCAGCCTCT +
Preference number: 2 (lower is better)
Translates to: DYVLFHEHGSQKSCPEHKSAFNH*ATSPAS
Trigger: AGAGGCTGGAGAGGTGGCTCAATGGTTAAAAGCACT...CTTGTGTTCAGGGCACGACTTTTGAGATCCATGTTCATGGAACAGAACATAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR-3UTR CCA 90 bp GAACAAAAAGCACATCACAGACACCAGCCTCTAGGTCCTCCCACCAGCTTTTACCAGTATCTTTCAGTCTaGGAAGAGTCAAACAAGAAG +
Preference number: 2 (lower is better)
Translates to: EQKAHHRHQPLGPPTSFYQYLSV*EESNKK
Trigger: CTTCTTGTTTGACTCTTCCCAGACTGAAAGATACTG...GTAAAAGCTGGTGGGAGGACCTAGAGGCTGGTGTCTGTGATGTGCTTTTTGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR-3UTR TCA 90 bp AAAACACAGGCGAAAGGACCTGTGTATGGTGGCACATGCCTTAAAACCAAGCACGTTTTCCCTCTACACTaGCAAAATTCTTTGGATGTC +
Preference number: 2 (lower is better)
Translates to: KTQAKGPVYGGTCLKTKHVFPLH*QNSLDV
Trigger: GACATCCAAAGAATTTTGTCAGTGTAGAGGGAAAAC...GTGCTTGGTTTTAAGGCATGTGCCACCATACACAGGTCCTTTCGCCTGTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR-3UTR TCA 90 bp GATTATGTTCTGTTCCATGAACATGGATCTCAAAAGTCGTGCCCTGAACACAAGTTGGGAACAGACTTCTaGCTTCAGCAGCTCAGCATT +
Preference number: 2 (lower is better)
Translates to: DYVLFHEHGSQKSCPEHKLGTDF*LQQLSI
Trigger: AATGCTGAGCTGCTGAAGTCAGAAGTCTGTTCCCAA...CTTGTGTTCAGGGCACGACTTTTGAGATCCATGTTCATGGAACAGAACATAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR-3UTR GCA 90 bp GATTATGTTCTGTTCCATGAACATGGATCTCAAAAGTCGTGCCCTGAACACAAGACAAGGATGCCTCCTTaGAAAGTACAGTGCCAGCAT +
Preference number: 2 (lower is better)
Translates to: DYVLFHEHGSQKSCPEHKTRMPP*KVQCQH
Trigger: ATGCTGGCACTGTACTTTGCAAGGAGGCATCCTTGT...CTTGTGTTCAGGGCACGACTTTTGAGATCCATGTTCATGGAACAGAACATAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR-3UTR CCA 90 bp TGGGAACAGACTTCTGACTTCAGCAGCTCAGCATTCTTGCTAGGGTTCACTGCCCACAAAGAGAGTTTGTaGTTTAATTCCAAGTGTAGA +
Preference number: 2 (lower is better)
Translates to: WEQTSDFSSSAFLLGFTAHKESL*FNSKCR
Trigger: TCTACACTTGGAATTAAACCACAAACTCTCTTTGTG...GGCAGTGAACCCTAGCAAGAATGCTGAGCTGCTGAAGTCAGAAGTCTGTTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR-3UTR TCA 90 bp AAAACACAGGCGAAAGGACCTGTGTATGGTGGCACATGCCTTAAAACCAAGCACAGAGAGAGAGATATCTaGGTATGCAAGAATAGTTTC +
Preference number: 2 (lower is better)
Translates to: KTQAKGPVYGGTCLKTKHRERDI*VCKNSF
Trigger: GAAACTATTCTTGCATACTCAGATATCTCTCTCTCT...GTGCTTGGTTTTAAGGCATGTGCCACCATACACAGGTCCTTTCGCCTGTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR-3UTR GCA 90 bp TCCTCTCACCTTTGCCTGTATAGTGCTGATATTACAGACCAATGCCAACAAAGAGATGTCAGGGTCTTTTaGCAAACCATCAAAGGTTTT +
Preference number: 2 (lower is better)
Translates to: SSHLCLYSADITDQCQQRDVRVF*QTIKGF
Trigger: AAAACCTTTGATGGTTTGGCAAAAGACCCTGACATC...TCTTTGTTGGCATTGGTCTGTAATATCAGCACTATACAGGCAAAGGTGAGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR GCA 72 bp AGCCCGGTGGCCAGGGGTATTGTGGAAGAGCCGCACTaGACGGTCCCCACAGGAGGCCAGGAAGCGGCCAGT +
Preference number: 3 (lower is better)
Translates to: SPVARGIVEEPH*TVPTGGQEAAS
Trigger: ACTGGCCGCTTCCTGGCCTCCTGTGGGGACCGTGCAGTGCGGCTCTTCCACAATACCCCTGGCCACCGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR CCA 72 bp ATCTCCTCCACCACAGCCCGGTGGCCAGGGGTATTGTaGAAGAGCCGCACTGCACGGTCCCCACAGGAGGCC +
Preference number: 3 (lower is better)
Translates to: ISSTTARWPGVL*KSRTARSPQEA
Trigger: GGCCTCCTGTGGGGACCGTGCAGTGCGGCTCTTCCACAATACCCCTGGCCACCGGGCTGTGGTGGAGGAGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR GCA 72 bp CTCTTGAGGGCCTCTTGGGCCTGGGTTAGCTGTTGCTaGAGCCTCTGGCGGGTACTTTCGCTGGATGCCCGC +
Preference number: 3 (lower is better)
Translates to: LLRASWAWVSCC*SLWRVLSLDAR
Trigger: GCGGGCATCCAGCGAAAGTACCCGCCAGAGGCTGCAGCAACAGCTAACCCAGGCCCAAGAGGCCCTCAAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR GCA 72 bp TGCGGCTTATCAGTCAGTAGCGGCTCCCTCCCACTGTaGACCCAGGACACACGGCCACCAGCCCAGTGCAGT +
Preference number: 3 (lower is better)
Translates to: CGLSVSSGSLPL*TQDTRPPAQCS
Trigger: ACTGCACTGGGCTGGTGGCCGTGTGTCCTGGGTGCACAGTGGGAGGGAGCCGCTACTGACTGATAAGCCGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR CCA 72 bp GCCTCTTGGGCCTGGGTTAGCTGTTGCTGCAGCCTCTaGCGGGTACTTTCGCTGGATGCCCGCTTCAGGAGG +
Preference number: 3 (lower is better)
Translates to: ASWAWVSCCCSL*RVLSLDARFRR
Trigger: CCTCCTGAAGCGGGCATCCAGCGAAAGTACCCGCCAGAGGCTGCAGCAACAGCTAACCCAGGCCCAAGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR CCA 72 bp GAGCAGGAGCTGCTGGGCCAGACAGCCAGACCCATCTaGAGCCAGAGTCACTTCTTCAGGGCACCCAGGCTC +
Preference number: 3 (lower is better)
Translates to: EQELLGQTARPI*SQSHFFRAPRL
Trigger: GAGCCTGGGTGCCCTGAAGAAGTGACTCTGGCTCCAGATGGGTCTGGCTGTCTGGCCCAGCAGCTCCTGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR GCA 72 bp CTGTTGCTGCAGCCTCTGGCGGGTACTTTCGCTGGATaGCCGCTTCAGGAGGCTCTGCATCTCCTCCACCAC +
Preference number: 3 (lower is better)
Translates to: LLLQPLAGTFAG*PLQEALHLLHH
Trigger: GTGGTGGAGGAGATGCAGAGCCTCCTGAAGCGGGCATCCAGCGAAAGTACCCGCCAGAGGCTGCAGCAACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR CCA 72 bp TTCAGGGCACCCAGGCTCTTGAGGGCCTCTTGGGCCTaGGTTAGCTGTTGCTGCAGCCTCTGGCGGGTACTT +
Preference number: 3 (lower is better)
Translates to: FRAPRLLRASWA*VSCCCSLWRVL
Trigger: AAGTACCCGCCAGAGGCTGCAGCAACAGCTAACCCAGGCCCAAGAGGCCCTCAAGAGCCTGGGTGCCCTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR CCA 72 bp GCTCTGCAGTCAGGGCTGAAGCGTACCAAGGTGGCATaGTCCAGCTCCACGTTGGCTCTCATGCTGCGGTGC +
Preference number: 3 (lower is better)
Translates to: ALQSGLKRTKVA*SSSTLALMLRC
Trigger: GCACCGCAGCATGAGAGCCAACGTGGAGCTGGACCATGCCACCTTGGTACGCTTCAGCCCTGACTGCAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000139565.8
3UTR-3UTR CAA 90 bp GAGGGTGTCCCCATTGGCCAGCCAAACAATGAAGGCTCTGCAGTCAGGGCTGAATGGTCCAGCTCCACGTaGGCTCTCATGCTGCGGTGC +
Preference number: 3 (lower is better)
Translates to: EGVPIGQPNNEGSAVRAEWSSST*ALMLRC
Trigger: GCACCGCAGCATGAGAGCCAACGTGGAGCTGGACCA...TTCAGCCCTGACTGCAGAGCCTTCATTGTTTGGCTGGCCAATGGGGACACCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000139565.8
3UTR TCA 72 bp TGTGGCTCTTCAGTGCTGCAGCCAGAAGGGGGTGCGTaGAGCTGTGCTGCTGAGGCTTCTCCTTACGAACCC +
Preference number: 3 (lower is better)
Translates to: CGSSVLQPEGGA*SCAAEASPYEP
Trigger: GGGTTCGTAAGGAGAAGCCTCAGCAGCACAGCTTCACGCACCCCCTTCTGGCTGCAGCACTGAAGAGCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000139565.8
ENSMUST00000201780.2
3UTR CCA 72 bp TTAGCTGTTGCTGCAGCCTCTGGCGGGTACTTTCGCTaGATGCCCGCTTCAGGAGGCTCTGCATCTCCTCCA +
Preference number: 3 (lower is better)
Translates to: LAVAAASGGYFR*MPASGGSASPP
Trigger: TGGAGGAGATGCAGAGCCTCCTGAAGCGGGCATCCAGCGAAAGTACCCGCCAGAGGCTGCAGCAACAGCTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR-3UTR CAA 90 bp CCCACTGTGGCTCTTCAGTGCTGCAGCCAGAAGGGGGTGCGTGAAGCTGTGCTGTTCTGCTTCTGCTTCTaGGATCCTGACTTCTTGGGT +
Preference number: 3 (lower is better)
Translates to: PTVALQCCSQKGVREAVLFCFCF*DPDFLG
Trigger: ACCCAAGAAGTCAGGATCCAAGAAGCAGAAGCAGAA...CAGCACAGCTTCACGCACCCCCTTCTGGCTGCAGCACTGAAGAGCCACAGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000139565.8
ENSMUST00000201780.2
3UTR-3UTR CAA 90 bp ATTCCACAAGTGGGGAGACGAACTCTGGCAGCCTCTGTGATTACAGGACTCCAGTCTCCCAGTGAGGGGTaGAGGCATGGCTCACCAGCA +
Preference number: 3 (lower is better)
Translates to: IPQVGRRTLAASVITGLQSPSEG*RHGSPA
Trigger: TGCTGGTGAGCCATGCCTCAACCCCTCACTGGGAGA...CTGGAGTCCTGTAATCACAGAGGCTGCCAGAGTTCGTCTCCCCACTTGTGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR TCA 72 bp TCCCGAAACAGACCTCCCAGACCTTCACATCTGGGGTaGAGCCACACGAACCCACAAACCTGCTACATGGGG +
Preference number: 3 (lower is better)
Translates to: SRNRPPRPSHLG*SHTNPQTCYMG
Trigger: CCCCATGTAGCAGGTTTGTGGGTTCGTGTGGCTTCACCCCAGATGTGAAGGTCTGGGAGGTCTGTTTCGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR TCA 72 bp TACTCCTCCTTCTCCCCGCGGCGTGTGTTGAAGAGATaGATATTGGTGCCAGTGGCCAAGGCCAGGACATGG +
Preference number: 3 (lower is better)
Translates to: YSSFSPRRVLKR*ILVPVAKARTW
Trigger: CCATGTCCTGGCCTTGGCCACTGGCACCAATATTCATCTCTTCAACACACGCCGCGGGGAGAAGGAGGAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR GCA 72 bp AGGAAGAATCCTTCAGCACCAATGAGACTGATGAGCTaGGCCCTCCCCCGTCAGGGTTTGGTGCAGTCCACA +
Preference number: 3 (lower is better)
Translates to: RKNPSAPMRLMS*ALPRQGLVQST
Trigger: TGTGGACTGCACCAAACCCTGACGGGGGAGGGCGCAGCTCATCAGTCTCATTGGTGCTGAAGGATTCTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR CCA 72 bp GGGACAGTGGCTAAGACCGGGATGGTAACAGAAGAGTaGGAGAGCTGCAGATGCTGCAGGCCATCTGCATGT +
Preference number: 3 (lower is better)
Translates to: GTVAKTGMVTEE*ESCRCCRPSAC
Trigger: ACATGCAGATGGCCTGCAGCATCTGCAGCTCTCCCACTCTTCTGTTACCATCCCGGTCTTAGCCACTGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR-3UTR CAA 90 bp GAGATGAATATTGGTGCCAGTGGCCAAGGCCAGGACATGGGTATCAGGGGAGAGGGGTCCTGCTGCTTCTaGTACTCCACATCTGTGTCC +
Preference number: 3 (lower is better)
Translates to: EMNIGASGQGQDMGIRGEGSCCF*YSTSVS
Trigger: GGACACAGATGTGGAGTACAAGAAGCAGCAGGACCC...CTCTCCCCTGATACCCATGTCCTGGCCTTGGCCACTGGCACCAATATTCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR TCA 72 bp AGCTCCACGTTGGCTCTCATGCTGCGGTGCTCCCGCTaGAGGAAATCTTTAGTGCTCCAGATACGGACAGTG +
Preference number: 3 (lower is better)
Translates to: SSTLALMLRCSR*RKSLVLQIRTV
Trigger: CACTGTCCGTATCTGGAGCACTAAAGATTTCCTTCAGCGGGAGCACCGCAGCATGAGAGCCAACGTGGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000139565.8
3UTR TCA 72 bp GCATCACTAGCTGGTCCCATGAAGCAGGCCCTGAAGTaGTGGGTTCAAGAAGTCCCTGAGAGAGGAACACCC +
Preference number: 3 (lower is better)
Translates to: ASLAGPMKQALK*WVQEVPERGTP
Trigger: GGGTGTTCCTCTCTCAGGGACTTCTTGAACCCATCACTTCAGGGCCTGCTTCATGGGACCAGCTAGTGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR TCA 72 bp TTCCACAAGTGGGGAGACGAACTCTGGCAGCCTCTGTaGTTACAGGACTCCAGGCCACAGGCCAGTGAATTG +
Preference number: 3 (lower is better)
Translates to: FHKWGDELWQPL*LQDSRPQASEL
Trigger: CAATTCACTGGCCTGTGGCCTGGAGTCCTGTAATCACAGAGGCTGCCAGAGTTCGTCTCCCCACTTGTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR GCA 72 bp GGGATGGTAACAGAAGAGTGGGAGAGCTGCAGATGCTaGAGGCCATCTGCATGTAGCAGCAGTGGTAGAAGG +
Preference number: 3 (lower is better)
Translates to: GMVTEEWESCRC*RPSACSSSGRR
Trigger: CCTTCTACCACTGCTGCTACATGCAGATGGCCTGCAGCATCTGCAGCTCTCCCACTCTTCTGTTACCATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR GCA 72 bp GCTAAGACCGGGATGGTAACAGAAGAGTGGGAGAGCTaGAGATGCTGCAGGCCATCTGCATGTAGCAGCAGT +
Preference number: 3 (lower is better)
Translates to: AKTGMVTEEWES*RCCRPSACSSS
Trigger: ACTGCTGCTACATGCAGATGGCCTGCAGCATCTGCAGCTCTCCCACTCTTCTGTTACCATCCCGGTCTTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR-3UTR CAA 90 bp ATTCCACAAGTGGGGAGACGAACTCTGGCAGCCTCTGTGATTACAGGACTCCAGCACCAGCTTTTACCCTaGGCAGCAGGCCTAGTCTTG +
Preference number: 3 (lower is better)
Translates to: IPQVGRRTLAASVITGLQHQLLP*AAGLVL
Trigger: CAAGACTAGGCCTGCTGCCAAGGGTAAAAGCTGGTG...CTGGAGTCCTGTAATCACAGAGGCTGCCAGAGTTCGTCTCCCCACTTGTGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR TCA 72 bp AGGCAGAGGCAGAGGCAGGTGGATCTCTGTAAAGTTTaGGGCGAGCCTGGTGTACAGAGTAAGTTCCAGGAC +
Preference number: 3 (lower is better)
Translates to: RQRQRQVDLCKV*GEPGVQSKFQD
Trigger: GTCCTGGAACTTACTCTGTACACCAGGCTCGCCTCAAACTTTACAGAGATCCACCTGCCTCTGCCTCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR GCA 72 bp ACAGTCTATGCAGTGCTGACTCGTGGTTCTTCAACCTaGCAAGCCCTTGGGCTGCATGCATGCACTACCACA +
Preference number: 3 (lower is better)
Translates to: TVYAVLTRGSST*QALGLHACTTT
Trigger: TGTGGTAGTGCATGCATGCAGCCCAAGGGCTTGGCAGGTTGAAGAACCACGAGTCAGCACTGCATAGACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR CCA 72 bp CCACATCTGTGTCCCATAGCTTCCATGTCCCATCCTTaGAGACGGAGGCCATCCTTCGAGAGTCATTGGAGA +
Preference number: 3 (lower is better)
Translates to: PHLCPIASMSHP*RRRPSFESHWR
Trigger: TCTCCAATGACTCTCGAAGGATGGCCTCCGTCTCCAAGGATGGGACATGGAAGCTATGGGACACAGATGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR CCA 72 bp AGGACTCCAGGCCACAGGCCAGTGAATTGGCCAGTTTaGGAACAGACTTCTGACTTCAGCAGCTCAGCATTC +
Preference number: 3 (lower is better)
Translates to: RTPGHRPVNWPV*EQTSDFSSSAF
Trigger: GAATGCTGAGCTGCTGAAGTCAGAAGTCTGTTCCCAAACTGGCCAATTCACTGGCCTGTGGCCTGGAGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR CCA 72 bp TTTCCTAGGGCAACACGAACAGCTCTAGCCTACCCCTaGGCAGTCTGTGCAATGACCTTTTGTAGTGCTCCC +
Preference number: 3 (lower is better)
Translates to: FPRATRTALAYP*AVCAMTFCSAP
Trigger: GGGAGCACTACAAAAGGTCATTGCACAGACTGCCCAGGGGTAGGCTAGAGCTGTTCGTGTTGCCCTAGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR CCA 72 bp AGTGCTGACTCGTGGTTCTTCAACCTGCCAAGCCCTTaGGCTGCATGCATGCACTACCACACCTTGTGTAGA +
Preference number: 3 (lower is better)
Translates to: SADSWFFNLPSP*AACMHYHTLCR
Trigger: TCTACACAAGGTGTGGTAGTGCATGCATGCAGCCCAAGGGCTTGGCAGGTTGAAGAACCACGAGTCAGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR-3UTR CAA 90 bp TGGGAACAGACTTCTGACTTCAGCAGCTCAGCATTCTTGCTAGGGTTCACTGCCAGAGCCCTAGGAAACTaGGCTTCACAAGGGCTGTGG +
Preference number: 3 (lower is better)
Translates to: WEQTSDFSSSAFLLGFTARALGN*ASQGLW
Trigger: CCACAGCCCTTGTGAAGCCAAGTTTCCTAGGGCTCT...GGCAGTGAACCCTAGCAAGAATGCTGAGCTGCTGAAGTCAGAAGTCTGTTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR TCA 72 bp TCATTGGAGAAAGCGAAAGAGTGGACAGATGCAGAGTaGCCCTTCAGTTCAAAGGCTCGCAGCACCTCCTGG +
Preference number: 3 (lower is better)
Translates to: SLEKAKEWTDAE*PFSSKARSTSW
Trigger: CCAGGAGGTGCTGCGAGCCTTTGAACTGAAGGGTCACTCTGCATCTGTCCACTCTTTCGCTTTCTCCAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR TCA 72 bp CCATCTGCATGTAGCAGCAGTGGTAGAAGGAGAGGGTaGCAAGGGAGCCATCAAGGTCAACTTCAGGGTTGT +
Preference number: 3 (lower is better)
Translates to: PSACSSSGRRRG*QGSHQGQLQGC
Trigger: ACAACCCTGAAGTTGACCTTGATGGCTCCCTTGTCACCCTCTCCTTCTACCACTGCTGCTACATGCAGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR TCA 72 bp GCCTCTGTGATTACAGGACTCCAGGCCACAGGCCAGTaGATTGGCCAGTTTGGGAACAGACTTCTGACTTCA +
Preference number: 3 (lower is better)
Translates to: ASVITGLQATGQ*IGQFGNRLLTS
Trigger: TGAAGTCAGAAGTCTGTTCCCAAACTGGCCAATTCACTGGCCTGTGGCCTGGAGTCCTGTAATCACAGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR CCA 72 bp TTTCTTCCCGAAACAGACCTCCCAGACCTTCACATCTaGGGTGAAGCCACACGAACCCACAAACCTGCTACA +
Preference number: 3 (lower is better)
Translates to: FLPETDLPDLHI*GEATRTHKPAT
Trigger: TGTAGCAGGTTTGTGGGTTCGTGTGGCTTCACCCCAGATGTGAAGGTCTGGGAGGTCTGTTTCGGGAAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR CCA 72 bp CATCCTTGGAGACGGAGGCCATCCTTCGAGAGTCATTaGAGAAAGCGAAAGAGTGGACAGATGCAGAGTGAC +
Preference number: 3 (lower is better)
Translates to: HPWRRRPSFESH*RKRKSGQMQSD
Trigger: GTCACTCTGCATCTGTCCACTCTTTCGCTTTCTCCAATGACTCTCGAAGGATGGCCTCCGTCTCCAAGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR CCA 72 bp TGTGATTACAGGACTCCAGGCCACAGGCCAGTGAATTaGCCAGTTTGGGAACAGACTTCTGACTTCAGCAGC +
Preference number: 3 (lower is better)
Translates to: CDYRTPGHRPVN*PVWEQTSDFSS
Trigger: GCTGCTGAAGTCAGAAGTCTGTTCCCAAACTGGCCAATTCACTGGCCTGTGGCCTGGAGTCCTGTAATCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR CCA 72 bp CAATTCTCAGCACCTACATGGCAGCTTGCAACTGTTTaGAACTCCAGTTCCAGGGCATCTGGCACCCTCACA +
Preference number: 3 (lower is better)
Translates to: QFSAPTWQLATV*NSSSRASGTLT
Trigger: TGTGAGGGTGCCAGATGCCCTGGAACTGGAGTTCCAAACAGTTGCAAGCTGCCATGTAGGTGCTGAGAATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR-3UTR CAA 90 bp GGGTTTTTCTGTGTAGCCCAGGTGGTGTGGAACTCACTCTGTAGACTAGGCTGGCTCCTGAAATTGGAGTaGGTTGACCTTTGCACCACC +
Preference number: 3 (lower is better)
Translates to: GFFCVAQVVWNSLCRLGWLLKLE*VDLCTT
Trigger: GGTGGTGCAAAGGTCAACCAACTCCAATTTCAGGAG...CCAGCCTAGTCTACAGAGTGAGTTCCACACCACCTGGGCTACACAGAAAAACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR TCA 72 bp CAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTaGACTCAGGACCTTTGGAAGAGCAGTCAGTGCTCT +
Preference number: 3 (lower is better)
Translates to: QMVVSHHVVAGN*TQDLWKSSQCS
Trigger: AGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR GCA 72 bp TCGAGAGTCATTGGAGAAAGCGAAAGAGTGGACAGATaGAGAGTGACCCTTCAGTTCAAAGGCTCGCAGCAC +
Preference number: 3 (lower is better)
Translates to: SRVIGESERVDR*RVTLQFKGSQH
Trigger: GTGCTGCGAGCCTTTGAACTGAAGGGTCACTCTGCATCTGTCCACTCTTTCGCTTTCTCCAATGACTCTCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR GCA 72 bp CGTCAGGGTTTGGTGCAGTCCACAAGGATGCCTCCTTaGAAAGTACAGTGCCAGCATCTAACTTCTCTGCAA +
Preference number: 3 (lower is better)
Translates to: RQGLVQSTRMPP*KVQCQHLTSLQ
Trigger: TTGCAGAGAAGTTAGATGCTGGCACTGTACTTTGCAAGGAGGCATCCTTGTGGACTGCACCAAACCCTGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR GCA 72 bp GGTTCTTCAACCTGCCAAGCCCTTGGGCTGCATGCATaGACTACCACACCTTGTGTAGAATCAGCAGATCAA +
Preference number: 3 (lower is better)
Translates to: GSSTCQALGLHA*TTTPCVESADQ
Trigger: TTGATCTGCTGATTCTACACAAGGTGTGGTAGTGCATGCATGCAGCCCAAGGGCTTGGCAGGTTGAAGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR GCA 72 bp GGCTTGAGAGATGGCTTAATGGTTGGGAGCACTGGCTaGTCTTCCAAAGGACCTGTGTTCAATTCTCAGCAC +
Preference number: 3 (lower is better)
Translates to: GLRDGLMVGSTG*SSKGPVFNSQH
Trigger: GTGCTGAGAATTGAACACAGGTCCTTTGGAAGAGCAGCCAGTGCTCCCAACCATTAAGCCATCTCTCAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR CCA 72 bp GCTTGCAACTGTTTGGAACTCCAGTTCCAGGGCATCTaGCACCCTCACACAGACATACAAGCAAGACACCAA +
Preference number: 3 (lower is better)
Translates to: ACNCLELQFQGI*HPHTDIQARHQ
Trigger: TTGGTGTCTTGCTTGTATGTCTGTGTGAGGGTGCCAGATGCCCTGGAACTGGAGTTCCAAACAGTTGCAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR CCA 72 bp GGGAAAGCAGAGACCATAGCTATAGGGCTTGAGAGATaGCTTAATGGTTGGGAGCACTGGCTGCTCTTCCAA +
Preference number: 3 (lower is better)
Translates to: GKAETIAIGLER*LNGWEHWLLFQ
Trigger: TTGGAAGAGCAGCCAGTGCTCCCAACCATTAAGCCATCTCTCAAGCCCTATAGCTATGGTCTCTGCTTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR-3UTR CAA 90 bp GGGTTTTTCTGTGTAGCCCAGGTGGTGTGGAACTCACTCTGTAGACTAGGCTGGGTTTTCCTCCTGAAATaGGAGTTGGTTGACCTTTGC +
Preference number: 3 (lower is better)
Translates to: GFFCVAQVVWNSLCRLGWVFLLK*ELVDLC
Trigger: GCAAAGGTCAACCAACTCCAATTTCAGGAGGAAAAC...CCAGCCTAGTCTACAGAGTGAGTTCCACACCACCTGGGCTACACAGAAAAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR TCA 72 bp GTCTGTCTTCTGTCTACTCCCCTTCTCCGTGCTAGATaGAGACAGATTCTACCCCTAGGGCCTGTGAGAAAA +
Preference number: 3 (lower is better)
Translates to: VCLLSTPLLRAR*RQILPLGPVRK
Trigger: TTTTCTCACAGGCCCTAGGGGTAGAATCTGTCTTCATCTAGCACGGAGAAGGGGAGTAGACAGAAGACAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR TCA 72 bp TCCCATTTATTGAGAGCTTACTTTGTCCTGGCTAGTTaGCTCGGGACCCAGAGCAAAGCAGACCAACAAGGG +
Preference number: 3 (lower is better)
Translates to: SHLLRAYFVLAS*LGTQSKADQQG
Trigger: CCCTTGTTGGTCTGCTTTGCTCTGGGTCCCGAGTCAACTAGCCAGGACAAAGTAAGCTCTCAATAAATGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR TCA 72 bp GAGTGTGCAGGATATGTGTGGCCAAAGAGCAGTCACTaGTGTCTTTCTATCCACATGTGGGACCTGGGGATT +
Preference number: 3 (lower is better)
Translates to: ECAGYVWPKSSH*CLSIHMWDLGI
Trigger: AATCCCCAGGTCCCACATGTGGATAGAAAGACATCAGTGACTGCTCTTTGGCCACACATATCCTGCACACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR TCA 72 bp AGGCGTGTCAGGATTTTTCACTGGTCTGGAGCTTGCTaGCTGGGTCACACTGGCTGGAGTTACAATTGTCAA +
Preference number: 3 (lower is better)
Translates to: RRVRIFHWSGAC*LGHTGWSYNCQ
Trigger: TTGACAATTGTAACTCCAGCCAGTGTGACCCAGTCAGCAAGCTCCAGACCAGTGAAAAATCCTGACACGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR GCA 72 bp GGGAGCATTATAACACTCCTAGCCTCACAGCATCTTTaGAGGAAGGCCACAGAGAGCATCGTTCCCCATTTT +
Preference number: 3 (lower is better)
Translates to: GSIITLLASQHL*RKATESIVPHF
Trigger: AAAATGGGGAACGATGCTCTCTGTGGCCTTCCTGCAAAGATGCTGTGAGGCTAGGAGTGTTATAATGCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR GCA 72 bp TGGGTTCAAGAAGTCCCTGAGAGAGGAACACCCTTTTaGGATGGCATTACTTCTCAAGGCACGGGAACCAAA +
Preference number: 3 (lower is better)
Translates to: WVQEVPERGTPF*DGITSQGTGTK
Trigger: TTTGGTTCCCGTGCCTTGAGAAGTAATGCCATCGCAAAAGGGTGTTCCTCTCTCAGGGACTTCTTGAACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR GCA 72 bp TGCAGCCACGGCACCAGTTACTTCTCAAGACACGAGTaGAGAAGCAAGAGAACGCATTTTCAGATGCTTTCC +
Preference number: 3 (lower is better)
Translates to: CSHGTSYFSRHE*RSKRTHFQMLS
Trigger: GGAAAGCATCTGAAAATGCGTTCTCTTGCTTCTGCACTCGTGTCTTGAGAAGTAACTGGTGCCGTGGCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR GCA 72 bp AAAACACAGGCGAAAGGACCTGTGTATGGTGGCACATaGCTTAAAACCAAGCACTCAGGAAGCCAAGACAGG +
Preference number: 3 (lower is better)
Translates to: KTQAKGPVYGGT*LKTKHSGSQDR
Trigger: CCTGTCTTGGCTTCCTGAGTGCTTGGTTTTAAGGCATGTGCCACCATACACAGGTCCTTTCGCCTGTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR CCA 72 bp GTGTCAGGATTTTTCACTGGTCTGGAGCTTGCTGACTaGGTCACACTGGCTGGAGTTACAATTGTCAACCAC +
Preference number: 3 (lower is better)
Translates to: VSGFFTGLELAD*VTLAGVTIVNH
Trigger: GTGGTTGACAATTGTAACTCCAGCCAGTGTGACCCAGTCAGCAAGCTCCAGACCAGTGAAAAATCCTGACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR CCA 72 bp ACCATAGCTATAGGGCTTGAGAGATGGCTTAATGGTTaGGAGCACTGGCTGCTCTTCCAAAGGACCTGTGTT +
Preference number: 3 (lower is better)
Translates to: TIAIGLERWLNG*EHWLLFQRTCV
Trigger: AACACAGGTCCTTTGGAAGAGCAGCCAGTGCTCCCAACCATTAAGCCATCTCTCAAGCCCTATAGCTATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR-3UTR CAA 90 bp GGGTTTTTCTGTGTAGCCCAGGTGGTGTGGAACTCACTCTGTAGACTAGGCTGGATTCTTTCCCCATTATaGTCCTGGATTGACTACGGT +
Preference number: 3 (lower is better)
Translates to: GFFCVAQVVWNSLCRLGWILSPL*SWIDYG
Trigger: ACCGTAGTCAATCCAGGACAATAATGGGGAAAGAAT...CCAGCCTAGTCTACAGAGTGAGTTCCACACCACCTGGGCTACACAGAAAAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR TCA 72 bp AAGGCACGGGAACCAAACCACCATGTTTATCCAAGATaGATGAGCAAGCAGAGCCCTAGGAAACTTGGCTTC +
Preference number: 3 (lower is better)
Translates to: KAREPNHHVYPR*MSKQSPRKLGF
Trigger: GAAGCCAAGTTTCCTAGGGCTCTGCTTGCTCATTCATCTTGGATAAACATGGTGGTTTGGTTCCCGTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR TCA 72 bp TCGGAGGGAGTTGGTGAGGTGGCAACTGTTTTCCAGTaGAACTTACAAGGACTGAATCGCACTGACAAGTCT +
Preference number: 3 (lower is better)
Translates to: SEGVGEVATVFQ*NLQGLNRTDKS
Trigger: AGACTTGTCAGTGCGATTCAGTCCTTGTAAGTTTCACTGGAAAACAGTTGCCACCTCACCAACTCCCTCCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR GCA 72 bp GATGGGAACCTTTTGCTAGATTCAAGCCTTCCTAGATaGCTGCCATCTTCCTCACCAACAAAGACCAGTCCA +
Preference number: 3 (lower is better)
Translates to: DGNLLLDSSLPR*LPSSSPTKTSP
Trigger: TGGACTGGTCTTTGTTGGTGAGGAAGATGGCAGGCATCTAGGAAGGCTTGAATCTAGCAAAAGGTTCCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR GCA 72 bp GCGTTGTTTTGTCAAGACAGGGTTTCTGTGTGGCCCTaGTATTCTATAACTAGCTCTGTAGACCAGTGTGGC +
Preference number: 3 (lower is better)
Translates to: ALFCQDRVSVWP*YSITSSVDQCG
Trigger: GCCACACTGGTCTACAGAGCTAGTTATAGAATAGCAGGGCCACACAGAAACCCTGTCTTGACAAAACAACGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR GCA 72 bp CCCACTTCAGTCACTCTAGAGCCTAGACTGCAGGCATaGACCACTACATATGGCTACAATTTTTGTAGGCAG +
Preference number: 3 (lower is better)
Translates to: PTSVTLEPRLQA*TTTYGYNFCRQ
Trigger: CTGCCTACAAAAATTGTAGCCATATGTAGTGGTGCATGCCTGCAGTCTAGGCTCTAGAGTGACTGAAGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR CCA 72 bp TTCTTCAGCAATTTCACAAACTGCTGCAAAGAGGCTTaGAGGCAAAGCATTTGTCCAGTGAGGGCTAGGGCT +
Preference number: 3 (lower is better)
Translates to: FFSNFTNCCKEA*RQSICPVRARA
Trigger: AGCCCTAGCCCTCACTGGACAAATGCTTTGCCTCCAAGCCTCTTTGCAGCAGTTTGTGAAATTGCTGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR-3UTR CAA 90 bp GATGAACTTCCCTGTGTCAGCAATGCCGATGTTGATGATGGGCGCTTTGTGTTTTTCTGCTTCTGCTTCTaGGATCCTGACTTCTTGGGT +
Preference number: 3 (lower is better)
Translates to: DELPCVSNADVDDGRFVFFCFCF*DPDFLG
Trigger: ACCCAAGAAGTCAGGATCCAAGAAGCAGAAGCAGAA...AAACACAAAGCGCCCATCATCAACATCGGCATTGCTGACACAGGGAAGTTCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000139565.8
3UTR-3UTR CAA 90 bp GATTATGTTCTGTTCCATGAACATGGATCTCAAAAGTCGTGCCCTGAACACAAGAGCCTCACAGCATCTTaGCAGGAAGGCCACAGAGAG +
Preference number: 3 (lower is better)
Translates to: DYVLFHEHGSQKSCPEHKSLTAS*QEGHRE
Trigger: CTCTCTGTGGCCTTCCTGCAAAGATGCTGTGAGGCT...CTTGTGTTCAGGGCACGACTTTTGAGATCCATGTTCATGGAACAGAACATAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR-3UTR CAA 90 bp CTGGAGCTTGCTGACTGGGTCACACTGGCTGGAGTTACAATTGTCAACCACCATCTTGAAGTAATGTGGTaGGAAACAGAGGTACTATCC +
Preference number: 3 (lower is better)
Translates to: LELADWVTLAGVTIVNHHLEVMW*ETEVLS
Trigger: GGATAGTACCTCTGTTTCCAACCACATTACTTCAAG...ATGGTGGTTGACAATTGTAACTCCAGCCAGTGTGACCCAGTCAGCAAGCTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR TCA 72 bp CACGGGAACCAAACCACCATGTTTATCCAAGATGAATaGGCAAGCAGAGCCCTAGGAAACTTGGCTTCACAA +
Preference number: 3 (lower is better)
Translates to: HGNQTTMFIQDE*ASRALGNLASQ
Trigger: TTGTGAAGCCAAGTTTCCTAGGGCTCTGCTTGCTCATTCATCTTGGATAAACATGGTGGTTTGGTTCCCGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR TCA 72 bp CAAAAGTCGTGCCCTGAACACAAGCTACAGAAGACCTaGGTCCAGATTGTTTGTAGAGACAAGTTGGGGAGA +
Preference number: 3 (lower is better)
Translates to: QKSCPEHKLQKT*VQIVCRDKLGR
Trigger: TCTCCCCAACTTGTCTCTACAAACAATCTGGACTCAGGTCTTCTGTAGCTTGTGTTCAGGGCACGACTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR GCA 72 bp ACACGAACCCACAAACCTGCTACATGGGGAGATAACTaGGTGACTGTTGTTCATCTGGTTAGTGTTGATCGT +
Preference number: 3 (lower is better)
Translates to: TRTHKPATWGDN*VTVVHLVSVDR
Trigger: ACGATCAACACTAACCAGATGAACAACAGTCACGCAGTTATCTCCCCATGTAGCAGGTTTGTGGGTTCGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR CCA 72 bp TCTCCTTACGAACCCGCTGATTCTGCTTCTGCTTCTTaGATCCTGACTTCTTGGGTTCGTTTTCTTTCTGAC +
Preference number: 3 (lower is better)
Translates to: SPYEPADSASAS*ILTSWVRFLSD
Trigger: GTCAGAAAGAAAACGAACCCAAGAAGTCAGGATCCAAGAAGCAGAAGCAGAATCAGCGGGTTCGTAAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000139565.8
3UTR CCA 72 bp CAACAAAGACCAGTCCAAGCAGTCTTCAAATGTACATaGCTGAGACCCAGTCTCTTAGTGGGTGGATTCCAT +
Preference number: 3 (lower is better)
Translates to: QQRPVQAVFKCT*LRPSLLVGGFH
Trigger: ATGGAATCCACCCACTAAGAGACTGGGTCTCAGCCATGTACATTTGAAGACTGCTTGGACTGGTCTTTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR CCA 72 bp TTTGGGGCGTTGTTTTGTCAAGACAGGGTTTCTGTGTaGCCCTGCTATTCTATAACTAGCTCTGTAGACCAG +
Preference number: 3 (lower is better)
Translates to: FGALFCQDRVSV*PCYSITSSVDQ
Trigger: CTGGTCTACAGAGCTAGTTATAGAATAGCAGGGCCACACAGAAACCCTGTCTTGACAAAACAACGCCCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR-3UTR CAA 90 bp GATGTCAAAAGTCAAGTCAGCAATACACTCCCCATGGACACACTCAAAGTACTCATCCTTCGAGAGTCATaGGAGAAAGCGAAAGAGTGG +
Preference number: 3 (lower is better)
Translates to: DVKSQVSNTLPMDTLKVLILRES*EKAKEW
Trigger: CCACTCTTTCGCTTTCTCCAATGACTCTCGAAGGAT...GAGTACTTTGAGTGTGTCCATGGGGAGTGTATTGCTGACTTGACTTTTGACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR-3UTR CAA 90 bp ACCCCTGATCCTCTCACCTTTGCCTGTATAGTGCTGATATTACAGACCAATGCCAAACCATCAAAGGTTTaGCTCTGTCTGTCTTCTGTC +
Preference number: 3 (lower is better)
Translates to: TPDPLTFACIVLILQTNAKPSKV*LCLSSV
Trigger: GACAGAAGACAGACAGAGCAAAACCTTTGATGGTTT...GGCATTGGTCTGTAATATCAGCACTATACAGGCAAAGGTGAGAGGATCAGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR TCA 72 bp TCGCAAGGACCCCAAAGACCACCAGGGAGTCAATTCTaGTGTAAACACATATGGGCTTTTATTAGGAGCTCA +
Preference number: 3 (lower is better)
Translates to: SQGPQRPPGSQF*CKHIWAFIRSS
Trigger: TGAGCTCCTAATAAAAGCCCATATGTGTTTACATCAGAATTGACTCCCTGGTGGTCTTTGGGGTCCTTGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR GCA 72 bp TGTTCCAACGCATTCTTCAGCAATTTCACAAACTGCTaGAAAGAGGCTTGGAGGCAAAGCATTTGTCCAGTG +
Preference number: 3 (lower is better)
Translates to: CSNAFFSNFTNC*KEAWRQSICPV
Trigger: CACTGGACAAATGCTTTGCCTCCAAGCCTCTTTGCAGCAGTTTGTGAAATTGCTGAAGAATGCGTTGGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR CCA 72 bp TGCCTTAAAACCAAGCACTCAGGAAGCCAAGACAGGTaGATTTCTATAAATTCCAGGCCAGCCAAGACAACA +
Preference number: 3 (lower is better)
Translates to: CLKTKHSGSQDR*ISINSRPAKTT
Trigger: TGTTGTCTTGGCTGGCCTGGAATTTATAGAAATCCACCTGTCTTGGCTTCCTGAGTGCTTGGTTTTAAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR-3UTR CAA 90 bp GATTATGTTCTGTTCCATGAACATGGATCTCAAAAGTCGTGCCCTGAACACAAGGTCCTTAATTACTTCTaGCTGCTATCAGGAGCCTGG +
Preference number: 3 (lower is better)
Translates to: DYVLFHEHGSQKSCPEHKVLNYF*LLSGAW
Trigger: CCAGGCTCCTGATAGCAGCAAGAAGTAATTAAGGAC...CTTGTGTTCAGGGCACGACTTTTGAGATCCATGTTCATGGAACAGAACATAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR TCA 72 bp CAAATCCGTGTGTGGCCACATGGTCTTCAATATGGCTaGTCTTATCAGAAACCTGAATCCACAATAGAGAGC +
Preference number: 3 (lower is better)
Translates to: QIRVWPHGLQYG*SYQKPESTIES
Trigger: GCTCTCTATTGTGGATTCAGGTTTCTGATAAGATCAGCCATATTGAAGACCATGTGGCCACACACGGATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR TCA 72 bp TGGAGTTACAATTGTCAACCACCATTGTGGGTGAAATaGACTGGGCCCTTTAGAACAGCCAGTGCTTTTAAC +
Preference number: 3 (lower is better)
Translates to: WSYNCQPPLWVK*TGPFRTASAFN
Trigger: GTTAAAAGCACTGGCTGTTCTAAAGGGCCCAGTTCATTTCACCCACAATGGTGGTTGACAATTGTAACTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR GCA 72 bp TTCTGTTCCAACGCATTCTTCAGCAATTTCACAAACTaGTGCAAAGAGGCTTGGAGGCAAAGCATTTGTCCA +
Preference number: 3 (lower is better)
Translates to: FCSNAFFSNFTN*CKEAWRQSICP
Trigger: TGGACAAATGCTTTGCCTCCAAGCCTCTTTGCAGCAGTTTGTGAAATTGCTGAAGAATGCGTTGGAACAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR CCA 72 bp ATGGGATTGGACCATTGCAAAGAAAGATCACAGGAGTaGCTAAATTTCACAACACTACGCAGGCCACAAAGA +
Preference number: 3 (lower is better)
Translates to: MGLDHCKERSQE*LNFTTLRRPQR
Trigger: TCTTTGTGGCCTGCGTAGTGTTGTGAAATTTAGCCACTCCTGTGATCTTTCTTTGCAATGGTCCAATCCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR-3UTR CAA 90 bp GATTATGTTCTGTTCCATGAACATGGATCTCAAAAGTCGTGCCCTGAACACAAGTCAGAGTCCCATTTATaGAGAGCTTACTTTGTCCTG +
Preference number: 3 (lower is better)
Translates to: DYVLFHEHGSQKSCPEHKSESHL*RAYFVL
Trigger: CAGGACAAAGTAAGCTCTCAATAAATGGGACTCTGA...CTTGTGTTCAGGGCACGACTTTTGAGATCCATGTTCATGGAACAGAACATAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR GCA 72 bp CACCTTTGCCTGTATAGTGCTGATATTACAGACCAATaGCAACAAAGACCAGTCCTTAATTACTTCTTGCTG +
Preference number: 3 (lower is better)
Translates to: HLCLYSADITDQ*QQRPVLNYFLL
Trigger: CAGCAAGAAGTAATTAAGGACTGGTCTTTGTTGGCATTGGTCTGTAATATCAGCACTATACAGGCAAAGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR CCA 72 bp ATTTCACAACACTACGCAGGCCACAAAGAGAGTTTGTaGTTTAATTCCAAGTGTAGAGAGAAGGAAGCCTTT +
Preference number: 3 (lower is better)
Translates to: ISQHYAGHKESL*FNSKCREKEAF
Trigger: AAAGGCTTCCTTCTCTCTACACTTGGAATTAAACCACAAACTCTCTTTGTGGCCTGCGTAGTGTTGTGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR TCA 72 bp TTCCCAAAGCAGGCTAAACTATGTAGAAAACTGACTTaGAGTAATGTGGTTGGAAACAGAGGTACTATCCAT +
Preference number: 3 (lower is better)
Translates to: FPKQAKLCRKLT*SNVVGNRGTIH
Trigger: ATGGATAGTACCTCTGTTTCCAACCACATTACTTCAAGTCAGTTTTCTACATAGTTTAGCCTGCTTTGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR TCA 72 bp TTGTTTTCCCAAAGCAGGCTAAACTATGTAGAAAACTaGCTTGAAGTAATGTGGTTGGAAACAGAGGTACTA +
Preference number: 3 (lower is better)
Translates to: LFSQSRLNYVEN*LEVMWLETEVL
Trigger: TAGTACCTCTGTTTCCAACCACATTACTTCAAGTCAGTTTTCTACATAGTTTAGCCTGCTTTGGGAAAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
CDS-3UTR CCA 90 bp ATCAGGGGAGAGTGCCAGGCGGCAAGGCATGGTGCTCGCCTCTTCAAAGCGGCCGCGCCACAGCCGCCGTaGCCACCAAGGCCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: IRGECQAARHGARLFKAAAPQPP*PPRPAD
Trigger: GTCTGCTGGCCTTGGTGGCCACGGCGGCTGTGGCGC...GGCCGCTTTGAAGAGGCGAGCACCATGCCTTGCCGCCTGGCACTCTCCCCTGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR CAA 72 bp TGCATCTCCTCCACCACAGCCCGGTGGCCAGGGGTATaGTGGAAGAGCCGCACTGCACGGTCCCCACAGGAG +
Preference number: 4 (lower is better)
Translates to: CISSTTARWPGV*WKSRTARSPQE
Trigger: CTCCTGTGGGGACCGTGCAGTGCGGCTCTTCCACAATACCCCTGGCCACCGGGCTGTGGTGGAGGAGATGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
CDS-3UTR GCA 90 bp GGGGAGAGTGCCAGGCGGCAAGGCATGGTGCTCGCCTCTTCAAAGCGGCCTGTCACTGTGGCTCTTCAGTaGTGCAGCCAGAAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: GESARRQGMVLASSKRPVTVALQ*CSQKGV
Trigger: CACCCCCTTCTGGCTGCAGCACTGAAGAGCCACAGT...GACAGGCCGCTTTGAAGAGGCGAGCACCATGCCTTGCCGCCTGGCACTCTCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
CDS-3UTR CCA 90 bp GCTGCGGTGCTCCCGCTGAAGGAAATCTTTAGTGCTCCAGATACGGACAGTGCGGCGCCACAGCCGCCGTaGCCACCAAGGCCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: AAVLPLKEIFSAPDTDSAAPQPP*PPRPAD
Trigger: GTCTGCTGGCCTTGGTGGCCACGGCGGCTGTGGCGC...CGCACTGTCCGTATCTGGAGCACTAAAGATTTCCTTCAGCGGGAGCACCGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000139565.8
CDS-3UTR GCA 90 bp TGCATCTCCTCCACCACAGCCCGGTGGCCAGGGGTATTGTGGAAGAGCCGCACTGTGGCTCTTCAGTGCTaGAGCCAGAAGGGGGTGCGT +
Preference number: 4 (lower is better)
Translates to: CISSTTARWPGVLWKSRTVALQC*SQKGVR
Trigger: ACGCACCCCCTTCTGGCTGCAGCACTGAAGAGCCAC...AGTGCGGCTCTTCCACAATACCCCTGGCCACCGGGCTGTGGTGGAGGAGATGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
CDS-3UTR GCA 90 bp AGCCGCACTGCACGGTCCCCACAGGAGGCCAGGAAGCGGCCAGTGATGTCAAAACCACGTTGGCTCTCATaGTGCGGTGCTCCCGCTGAA +
Preference number: 4 (lower is better)
Translates to: SRTARSPQEARKRPVMSKPRWLS*CGAPAE
Trigger: TTCAGCGGGAGCACCGCAGCATGAGAGCCAACGTGG...TTTTGACATCACTGGCCGCTTCCTGGCCTCCTGTGGGGACCGTGCAGTGCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
CDS-3UTR GCA 90 bp TGTGCACCCAGGACACACGGCCACCAGCCCAGTGCAGTCTCTACCGTTTCCTTCCGCTTCAGGAGGCTCTaGATCTCCTCCACCACAGCC +
Preference number: 4 (lower is better)
Translates to: CAPRTHGHQPSAVSTVSFRFRRL*ISSTTA
Trigger: GGCTGTGGTGGAGGAGATGCAGAGCCTCCTGAAGCG...GAAGGAAACGGTAGAGACTGCACTGGGCTGGTGGCCGTGTGTCCTGGGTGCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
CDS-3UTR CCA 90 bp ATGCAAGATATATTCCCACTGTGGCTCTTCAGTGCTGCAGCCAGAAGGGGGTGCGCGCCACAGCCGCCGTaGCCACCAAGGCCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: MQDIFPLWLFSAAARRGCAPQPP*PPRPAD
Trigger: GTCTGCTGGCCTTGGTGGCCACGGCGGCTGTGGCGC...GCACCCCCTTCTGGCTGCAGCACTGAAGAGCCACAGTGGGAATATATCTTGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000139565.8
ENSMUST00000201780.2
CDS-3UTR CCA 90 bp CTGCTGGGCCAGACAGCCAGACCCATCTGGAGCCAGAGTCACTTCTTCAGGGCAGGTCCAGCTCCACGTTaGCTCTCATGCTGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: LLGQTARPIWSQSHFFRAGPAPR*LSCCGA
Trigger: AGCACCGCAGCATGAGAGCCAACGTGGAGCTGGACC...TGCCCTGAAGAAGTGACTCTGGCTCCAGATGGGTCTGGCTGTCTGGCCCAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR CAA 72 bp TGGAGCCAGAGTCACTTCTTCAGGGCACCCAGGCTCTaGAGGGCCTCTTGGGCCTGGGTTAGCTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: WSQSHFFRAPRL*RASWAWVSCCC
Trigger: GCAGCAACAGCTAACCCAGGCCCAAGAGGCCCTCAAGAGCCTGGGTGCCCTGAAGAAGTGACTCTGGCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
CDS-3UTR GCA 90 bp TGTGCACCCAGGACACACGGCCACCAGCCCAGTGCAGTCTCTACCGTTTCCTTCACTGTGGCTCTTCAGTaGTGCAGCCAGAAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: CAPRTHGHQPSAVSTVSFTVALQ*CSQKGV
Trigger: CACCCCCTTCTGGCTGCAGCACTGAAGAGCCACAGT...GAAGGAAACGGTAGAGACTGCACTGGGCTGGTGGCCGTGTGTCCTGGGTGCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
CDS-3UTR CCA 90 bp TGGGAACAGACTTCTGACTTCAGCAGCTCAGCATTCTTGCTAGGGTTCACTGCCGCGCCACAGCCGCCGTaGCCACCAAGGCCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: WEQTSDFSSSAFLLGFTAAPQPP*PPRPAD
Trigger: GTCTGCTGGCCTTGGTGGCCACGGCGGCTGTGGCGC...GGCAGTGAACCCTAGCAAGAATGCTGAGCTGCTGAAGTCAGAAGTCTGTTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
CDS-3UTR TCA 90 bp TCCACATCTGTGTCCCATAGCTTCCATGTCCCATCCTTGGAGACGGAGGCCATCCCAGAAGGGGGTGCGTaGAGCTGTGCTGCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: STSVSHSFHVPSLETEAIPEGGA*SCAAEA
Trigger: AGCCTCAGCAGCACAGCTTCACGCACCCCCTTCTGG...GATGGCCTCCGTCTCCAAGGATGGGACATGGAAGCTATGGGACACAGATGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
CDS-3UTR GCA 90 bp GCCTCTAGGTCCTCCCACCAGCTTTTACCCTTGGCAGCAGGCCTAGTCTTGTCTGTGGCTCTTCAGTGCTaGAGCCAGAAGGGGGTGCGT +
Preference number: 4 (lower is better)
Translates to: ASRSSHQLLPLAAGLVLSVALQC*SQKGVR
Trigger: ACGCACCCCCTTCTGGCTGCAGCACTGAAGAGCCAC...AGACAAGACTAGGCCTGCTGCCAAGGGTAAAAGCTGGTGGGAGGACCTAGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
CDS-3UTR CCA 90 bp AAGGAAATCTTTAGTGCTCCAGATACGGACAGTGCGGTCATCCGCACAGGTGGCCCGAAACAGACGGGCTaGCTGGGCTTCTCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: KEIFSAPDTDSAVIRTGGPKQTG*LGFSSA
Trigger: GGCCGAGGAGAAGCCCAGCCAGCCCGTCTGTTTCGG...GCCACCTGTGCGGATGACCGCACTGTCCGTATCTGGAGCACTAAAGATTTCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000139565.8
CDS-3UTR CCA 90 bp TGTGCACCCAGGACACACGGCCACCAGCCCAGTGCAGTCTCTACCGTTTCCTTCCCAGACCTTCACATCTaGGGTGAAGCCACACGAACC +
Preference number: 4 (lower is better)
Translates to: CAPRTHGHQPSAVSTVSFPDLHI*GEATRT
Trigger: GGTTCGTGTGGCTTCACCCCAGATGTGAAGGTCTGG...GAAGGAAACGGTAGAGACTGCACTGGGCTGGTGGCCGTGTGTCCTGGGTGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
CDS-3UTR TCA 90 bp AAAAGCACATCACAGACACCAGCCTCTAGGTCCTCCCACCAGCTTTTACCCTTGCCAGAAGGGGGTGCGTaGAGCTGTGCTGCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: KSTSQTPASRSSHQLLPLPEGGA*SCAAEA
Trigger: AGCCTCAGCAGCACAGCTTCACGCACCCCCTTCTGG...CAAGGGTAAAAGCTGGTGGGAGGACCTAGAGGCTGGTGTCTGTGATGTGCTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
CDS-3UTR GCA 90 bp TGTGCACCCAGGACACACGGCCACCAGCCCAGTGCAGTCTCTACCGTTTCCTTCAGAGATGAATATTGGTaGCAGTGGCCAAGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: CAPRTHGHQPSAVSTVSFRDEYW*QWPRPG
Trigger: TCCTGGCCTTGGCCACTGGCACCAATATTCATCTCT...GAAGGAAACGGTAGAGACTGCACTGGGCTGGTGGCCGTGTGTCCTGGGTGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
CDS-3UTR GCA 90 bp GAACAAAAAGCACATCACAGACACCAGCCTCTAGGTCCTCCCACCAGCTTTTACGTGGAAGAGCCGCACTaGACGGTCCCCACAGGAGGC +
Preference number: 4 (lower is better)
Translates to: EQKAHHRHQPLGPPTSFYVEEPH*TVPTGG
Trigger: GCCTCCTGTGGGGACCGTGCAGTGCGGCTCTTCCAC...GTAAAAGCTGGTGGGAGGACCTAGAGGCTGGTGTCTGTGATGTGCTTTTTGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
CDS-3UTR CCA 90 bp TGTGCACCCAGGACACACGGCCACCAGCCCAGTGCAGTCTCTACCGTTTCCTTCGATATATTCCCACTGTaGCTCTTCAGTGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: CAPRTHGHQPSAVSTVSFDIFPL*LFSAAA
Trigger: GGCTGCAGCACTGAAGAGCCACAGTGGGAATATATC...GAAGGAAACGGTAGAGACTGCACTGGGCTGGTGGCCGTGTGTCCTGGGTGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
CDS-3UTR CCA 90 bp TCCACATCTGTGTCCCATAGCTTCCATGTCCCATCCTTGGAGACGGAGGCCATCGGTCATCCGCACAGGTaGCCAGATACTTGCCGTTGC +
Preference number: 4 (lower is better)
Translates to: STSVSHSFHVPSLETEAIGHPHR*PDTCRC
Trigger: GCAACGGCAAGTATCTGGCCACCTGTGCGGATGACC...GATGGCCTCCGTCTCCAAGGATGGGACATGGAAGCTATGGGACACAGATGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR CAA 72 bp ATGAGACTGATGAGCTGCGCCCTCCCCCGTCAGGGTTaGGTGCAGTCCACAAGGATGCCTCCTTGCAAAGTA +
Preference number: 4 (lower is better)
Translates to: MRLMSCALPRQG*VQSTRMPPCKV
Trigger: TACTTTGCAAGGAGGCATCCTTGTGGACTGCACCAAACCCTGACGGGGGAGGGCGCAGCTCATCAGTCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
CDS-3UTR TCA 90 bp CTCCCAGACCTTCACATCTGGGGTGAAGCCACACGAACCCACAAACCTGCTACAGTGAAGCTGTGCTGCTaGGGCTTCTCCTTACGAACC +
Preference number: 4 (lower is better)
Translates to: LPDLHIWGEATRTHKPATVKLCC*GFSLRT
Trigger: GGTTCGTAAGGAGAAGCCTCAGCAGCACAGCTTCAC...TGTAGCAGGTTTGTGGGTTCGTGTGGCTTCACCCCAGATGTGAAGGTCTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
CDS-3UTR TCA 90 bp GAGATGAATATTGGTGCCAGTGGCCAAGGCCAGGACATGGGTATCAGGGGAGAGCTGCGGTGCTCCCGCTaGAGGAAATCTTTAGTGCTC +
Preference number: 4 (lower is better)
Translates to: EMNIGASGQGQDMGIRGELRCSR*RKSLVL
Trigger: GAGCACTAAAGATTTCCTTCAGCGGGAGCACCGCAG...CTCTCCCCTGATACCCATGTCCTGGCCTTGGCCACTGGCACCAATATTCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR CAA 72 bp ACACCAGCCTCTAGGTCCTCCCACCAGCTTTTACCCTaGGCAGCAGGCCTAGTCTTGTCTGTCTGTGTTAGC +
Preference number: 4 (lower is better)
Translates to: TPASRSSHQLLP*AAGLVLSVCVS
Trigger: GCTAACACAGACAGACAAGACTAGGCCTGCTGCCAAGGGTAAAAGCTGGTGGGAGGACCTAGAGGCTGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR CAA 72 bp TGGGAACAGACTTCTGACTTCAGCAGCTCAGCATTCTaGCTAGGGTTCACTGCCTTCCCTGTGCAGCCACGG +
Preference number: 4 (lower is better)
Translates to: WEQTSDFSSSAF*LGFTAFPVQPR
Trigger: CCGTGGCTGCACAGGGAAGGCAGTGAACCCTAGCAAGAATGCTGAGCTGCTGAAGTCAGAAGTCTGTTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
CDS-3UTR TCA 90 bp CTGGAGCTTGCTGACTGGGTCACACTGGCTGGAGTTACAATTGTCAACCACCATCTCTGCAGTCAGGGCTaGAGCGTACCAAGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: LELADWVTLAGVTIVNHHLCSQG*SVPRWH
Trigger: ATGCCACCTTGGTACGCTTCAGCCCTGACTGCAGAG...ATGGTGGTTGACAATTGTAACTCCAGCCAGTGTGACCCAGTCAGCAAGCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
CDS-3UTR TCA 90 bp TGTGCACCCAGGACACACGGCCACCAGCCCAGTGCAGTCTCTACCGTTTCCTTCCTTTCAGATTCCATATaGGGACAGTTGTGTCACTGG +
Preference number: 4 (lower is better)
Translates to: CAPRTHGHQPSAVSTVSFLSDSI*GQLCHW
Trigger: CCAGTGACACAACTGTCCTCATATGGAATCTGAAAG...GAAGGAAACGGTAGAGACTGCACTGGGCTGGTGGCCGTGTGTCCTGGGTGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
CDS-3UTR GCA 90 bp TCTCATGCTGCGGTGCTCCCGCTGAAGGAAATCTTTAGTGCTCCAGATACGGACATCTTGTCCCTGGGGTaGACCTGCAACCCGAAACAG +
Preference number: 4 (lower is better)
Translates to: SHAAVLPLKEIFSAPDTDILSLG*TCNPKQ
Trigger: CTGTTTCGGGTTGCAGGTGCACCCCAGGGACAAGAT...GTCCGTATCTGGAGCACTAAAGATTTCCTTCAGCGGGAGCACCGCAGCATGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000139565.8
CDS-3UTR GCA 90 bp GAACAAAAAGCACATCACAGACACCAGCCTCTAGGTCCTCCCACCAGCTTTTACGCCTGGGTTAGCTGTTaGTGCAGCCTCTGGCGGGTA +
Preference number: 4 (lower is better)
Translates to: EQKAHHRHQPLGPPTSFYAWVSC*CSLWRV
Trigger: TACCCGCCAGAGGCTGCAGCAACAGCTAACCCAGGC...GTAAAAGCTGGTGGGAGGACCTAGAGGCTGGTGTCTGTGATGTGCTTTTTGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
CDS-3UTR CCA 90 bp AAAACACAGGCGAAAGGACCTGTGTATGGTGGCACATGCCTTAAAACCAAGCACGGCGGGTACTTTCGCTaGATGCCCGCTTCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: KTQAKGPVYGGTCLKTKHGGYFR*MPASGG
Trigger: GCCTCCTGAAGCGGGCATCCAGCGAAAGTACCCGCC...GTGCTTGGTTTTAAGGCATGTGCCACCATACACAGGTCCTTTCGCCTGTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR CAA 72 bp TCCACATCTGTGTCCCATAGCTTCCATGTCCCATCCTaGGAGACGGAGGCCATCCTTCGAGAGTCATTGGAG +
Preference number: 4 (lower is better)
Translates to: STSVSHSFHVPS*ETEAILRESLE
Trigger: CTCCAATGACTCTCGAAGGATGGCCTCCGTCTCCAAGGATGGGACATGGAAGCTATGGGACACAGATGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR CAA 72 bp CGGACAGTGCGGTCATCCGCACAGGTGGCCAGATACTaGCCGTTGCTGCTGAAGTCCATGCAAGATATATTC +
Preference number: 4 (lower is better)
Translates to: RTVRSSAQVARY*PLLLKSMQDIF
Trigger: GAATATATCTTGCATGGACTTCAGCAGCAACGGCAAGTATCTGGCCACCTGTGCGGATGACCGCACTGTCCG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000139565.8
ENSMUST00000201780.2
3UTR CAA 72 bp CGCTTGGTCATCTTAAAAACACGGAGGGTGTCCCCATaGGCCAGCCAAACAATGAAGGCTCTGCAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: RLVILKTRRVSP*ASQTMKALQSG
Trigger: CCCTGACTGCAGAGCCTTCATTGTTTGGCTGGCCAATGGGGACACCCTCCGTGTTTTTAAGATGACCAAGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000139565.8
3UTR CAA 72 bp GAGGAGAGTCTTCGTCTAGCATCTCCCAGTGAGGGGTaGAGGCATGGCTCACCAGCAGAGCTATTTGTCTAC +
Preference number: 4 (lower is better)
Translates to: EESLRLASPSEG*RHGSPAELFVY
Trigger: GTAGACAAATAGCTCTGCTGGTGAGCCATGCCTCAACCCCTCACTGGGAGATGCTAGACGAAGACTCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR CAA 72 bp CCAAGCCCTTGGGCTGCATGCATGCACTACCACACCTaGTGTAGAATCAGCAGATCAATGCCGCCTCTACTC +
Preference number: 4 (lower is better)
Translates to: PSPWAACMHYHT*CRISRSMPPLL
Trigger: GAGTAGAGGCGGCATTGATCTGCTGATTCTACACAAGGTGTGGTAGTGCATGCATGCAGCCCAAGGGCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR CAA 72 bp CCACCATGTGGTTGCTGGGAATTGAACTCAGGACCTTaGGAAGAGCAGTCAGTGCTCTTAACCGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: PPCGCWELNSGP*EEQSVLLTAGP
Trigger: TGGCCCAGCGGTTAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
CDS-3UTR GCA 90 bp AAAAGCACATCACAGACACCAGCCTCTAGGTCCTCCCACCAGCTTTTACCCTTGTGGGTTAGCTGTTGCTaGAGCCTCTGGCGGGTACTT +
Preference number: 4 (lower is better)
Translates to: KSTSQTPASRSSHQLLPLWVSCC*SLWRVL
Trigger: AAGTACCCGCCAGAGGCTGCAGCAACAGCTAACCCA...CAAGGGTAAAAGCTGGTGGGAGGACCTAGAGGCTGGTGTCTGTGATGTGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
CDS-3UTR CCA 90 bp TGCCTGCCATCTTCCTCACCAACAAAGACCAGTCCAAGCAGTCTTCAAATGTACCCAGGCGGCAAGGCATaGTGCTCGCCTCTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: CLPSSSPTKTSPSSLQMYPGGKA*CSPLQS
Trigger: GCTTTGAAGAGGCGAGCACCATGCCTTGCCGCCTGG...GTACATTTGAAGACTGCTTGGACTGGTCTTTGTTGGTGAGGAAGATGGCAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR CAA 72 bp GGGTGGATTCCATTCTTTCCCCATTATTGTCCTGGATaGACTACGGTCAAGCCTCCTGTCCACAACCTCCCC +
Preference number: 4 (lower is better)
Translates to: GWIPFFPHYCPG*TTVKPPVHNLP
Trigger: GGGGAGGTTGTGGACAGGAGGCTTGACCGTAGTCAATCCAGGACAATAATGGGGAAAGAATGGAATCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR CAA 72 bp TCAATTCTCAGCACCTACATGGCAGCTTGCAACTGTTaGGAACTCCAGTTCCAGGGCATCTGGCACCCTCAC +
Preference number: 4 (lower is better)
Translates to: SILSTYMAACNC*ELQFQGIWHPH
Trigger: GTGAGGGTGCCAGATGCCCTGGAACTGGAGTTCCAAACAGTTGCAAGCTGCCATGTAGGTGCTGAGAATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
CDS-3UTR TCA 90 bp GAACAAAAAGCACATCACAGACACCAGCCTCTAGGTCCTCCCACCAGCTTTTACCTGCGGTGCTCCCGCTaGAGGAAATCTTTAGTGCTC +
Preference number: 4 (lower is better)
Translates to: EQKAHHRHQPLGPPTSFYLRCSR*RKSLVL
Trigger: GAGCACTAAAGATTTCCTTCAGCGGGAGCACCGCAG...GTAAAAGCTGGTGGGAGGACCTAGAGGCTGGTGTCTGTGATGTGCTTTTTGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
CDS-3UTR TCA 90 bp GGAGATAACTGCGTGACTGTTGTTCATCTGGTTAGTGTTGATCGTGGAAAGCACCCCTGCAGTCAGGGCTaGAGCGTACCAAGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: GDNCVTVVHLVSVDRGKHPCSQG*SVPRWH
Trigger: ATGCCACCTTGGTACGCTTCAGCCCTGACTGCAGGG...GTGCTTTCCACGATCAACACTAACCAGATGAACAACAGTCACGCAGTTATCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
CDS-3UTR TCA 90 bp GAACAAAAAGCACATCACAGACACCAGCCTCTAGGTCCTCCCACCAGCTTTTACCCTTCACATCTGGGGTaGAGCCACACGAACCCACAA +
Preference number: 4 (lower is better)
Translates to: EQKAHHRHQPLGPPTSFYPSHLG*SHTNPQ
Trigger: TTGTGGGTTCGTGTGGCTTCACCCCAGATGTGAAGG...GTAAAAGCTGGTGGGAGGACCTAGAGGCTGGTGTCTGTGATGTGCTTTTTGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
CDS-3UTR CCA 90 bp AAACCATCAAAGGTTTTGCTCTGTCTGTCTTCTGTCTACTCCCCTTCTCCGTGCGGTCATCCGCACAGGTaGCCAGATACTTGCCGTTGC +
Preference number: 4 (lower is better)
Translates to: KPSKVLLCLSSVYSPSPCGHPHR*PDTCRC
Trigger: GCAACGGCAAGTATCTGGCCACCTGTGCGGATGACC...GCACGGAGAAGGGGAGTAGACAGAAGACAGACAGAGCAAAACCTTTGATGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
CDS-3UTR CCA 90 bp TGCCTGCCATCTTCCTCACCAACAAAGACCAGTCCAAGCAGTCTTCAAATGTACGCTCGCAGCACCTCCTaGAACTCTCCTTTCTTCCCG +
Preference number: 4 (lower is better)
Translates to: CLPSSSPTKTSPSSLQMYARSTS*NSPFFP
Trigger: CGGGAAGAAAGGAGAGTTCCAGGAGGTGCTGCGAGC...GTACATTTGAAGACTGCTTGGACTGGTCTTTGTTGGTGAGGAAGATGGCAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
CDS-3UTR CCA 90 bp ACCCCTGATCCTCTCACCTTTGCCTGTATAGTGCTGATATTACAGACCAATGCCCTCTTGAGGGCCTCTTaGGCCTGGGTTAGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: TPDPLTFACIVLILQTNALLRAS*AWVSCC
Trigger: GCAACAGCTAACCCAGGCCCAAGAGGCCCTCAAGAG...GGCATTGGTCTGTAATATCAGCACTATACAGGCAAAGGTGAGAGGATCAGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
CDS-3UTR TCA 90 bp AAAACACAGGCGAAAGGACCTGTGTATGGTGGCACATGCCTTAAAACCAAGCACGTGAAGCTGTGCTGCTaGGGCTTCTCCTTACGAACC +
Preference number: 4 (lower is better)
Translates to: KTQAKGPVYGGTCLKTKHVKLCC*GFSLRT
Trigger: GGTTCGTAAGGAGAAGCCTCAGCAGCACAGCTTCAC...GTGCTTGGTTTTAAGGCATGTGCCACCATACACAGGTCCTTTCGCCTGTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
CDS-3UTR TCA 90 bp GAACAAAAAGCACATCACAGACACCAGCCTCTAGGTCCTCCCACCAGCTTTTACCCAGGAAGCGGCCAGTaGTGTCAAAAGTCAAGTCAG +
Preference number: 4 (lower is better)
Translates to: EQKAHHRHQPLGPPTSFYPGSGQ*CQKSSQ
Trigger: CTGACTTGACTTTTGACATCACTGGCCGCTTCCTGG...GTAAAAGCTGGTGGGAGGACCTAGAGGCTGGTGTCTGTGATGTGCTTTTTGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
CDS-3UTR GCA 90 bp GGGTTTTTCTGTGTAGCCCAGGTGGTGTGGAACTCACTCTGTAGACTAGGCTGGGAAAGAGTGGACAGATaGAGAGTGACCCTTCAGTTC +
Preference number: 4 (lower is better)
Translates to: GFFCVAQVVWNSLCRLGWERVDR*RVTLQF
Trigger: GAACTGAAGGGTCACTCTGCATCTGTCCACTCTTTC...CCAGCCTAGTCTACAGAGTGAGTTCCACACCACCTGGGCTACACAGAAAAACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
CDS-3UTR GCA 90 bp GATTATGTTCTGTTCCATGAACATGGATCTCAAAAGTCGTGCCCTGAACACAAGGGCGGCAAGGCATGGTaGTCGCCTCTTCAAAGCGGC +
Preference number: 4 (lower is better)
Translates to: DYVLFHEHGSQKSCPEHKGGKAW*SPLQSG
Trigger: GCCGCTTTGAAGAGGCGAGCACCATGCCTTGCCGCC...CTTGTGTTCAGGGCACGACTTTTGAGATCCATGTTCATGGAACAGAACATAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
CDS-3UTR CCA 90 bp ACCCCTGATCCTCTCACCTTTGCCTGTATAGTGCTGATATTACAGACCAATGCCTGTTGCTGCAGCCTCTaGCGGGTACTTTCGCTGGAT +
Preference number: 4 (lower is better)
Translates to: TPDPLTFACIVLILQTNACCCSL*RVLSLD
Trigger: ATCCAGCGAAAGTACCCGCCAGAGGCTGCAGCAACA...GGCATTGGTCTGTAATATCAGCACTATACAGGCAAAGGTGAGAGGATCAGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR CAA 72 bp ACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATaGAACTCAGGACCTTTGGAAGAGCAGTCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: TDGCEPPCGCWE*NSGPLEEQSVL
Trigger: GAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR CAA 72 bp GGACCTGTGTTCAATTCTCAGCACCTACATGGCAGCTaGCAACTGTTTGGAACTCCAGTTCCAGGGCATCTG +
Preference number: 4 (lower is better)
Translates to: GPVFNSQHLHGS*QLFGTPVPGHL
Trigger: CAGATGCCCTGGAACTGGAGTTCCAAACAGTTGCAAGCTGCCATGTAGGTGCTGAGAATTGAACACAGGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
CDS-3UTR CCA 90 bp CGGCCAGTGATGTCAAAAGTCAAGTCAGCAATACACTCCCCATGGACACACTCAGATATATTCCCACTGTaGCTCTTCAGTGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: RPVMSKVKSAIHSPWTHSDIFPL*LFSAAA
Trigger: GGCTGCAGCACTGAAGAGCCACAGTGGGAATATATC...TGAGTGTGTCCATGGGGAGTGTATTGCTGACTTGACTTTTGACATCACTGGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
CDS-3UTR CCA 90 bp GATTATGTTCTGTTCCATGAACATGGATCTCAAAAGTCGTGCCCTGAACACAAGGGTCCAGCTCCACGTTaGCTCTCATGCTGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: DYVLFHEHGSQKSCPEHKGPAPR*LSCCGA
Trigger: AGCACCGCAGCATGAGAGCCAACGTGGAGCTGGACC...CTTGTGTTCAGGGCACGACTTTTGAGATCCATGTTCATGGAACAGAACATAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
CDS-3UTR CCA 90 bp TCCTCTCACCTTTGCCTGTATAGTGCTGATATTACAGACCAATGCCAACAAAGAAGGGCCTCTTGGGCCTaGGTTAGCTGTTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SSHLCLYSADITDQCQQRRASWA*VSCCCS
Trigger: GCTGCAGCAACAGCTAACCCAGGCCCAAGAGGCCCT...TCTTTGTTGGCATTGGTCTGTAATATCAGCACTATACAGGCAAAGGTGAGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR CAA 72 bp GACCAATGCCAACAAAGACCAGTCCTTAATTACTTCTaGCTGCTATCAGGAGCCTGGTCCAGATGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: DQCQQRPVLNYF*LLSGAWSRWRL
Trigger: GAGCCTCCATCTGGACCAGGCTCCTGATAGCAGCAAGAAGTAATTAAGGACTGGTCTTTGTTGGCATTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR CAA 72 bp TGGATGTCAGGGTCTTTTGCCAAACCATCAAAGGTTTaGCTCTGTCTGTCTTCTGTCTACTCCCCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: WMSGSFAKPSKV*LCLSSVYSPSP
Trigger: CGGAGAAGGGGAGTAGACAGAAGACAGACAGAGCAAAACCTTTGATGGTTTGGCAAAAGACCCTGACATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
CDS-3UTR TCA 90 bp ACACTCAAAGTACTCCTCCTTCTCCCCGCGGCGTGTGTTGAAGAGATGAATATTACTTGCCGTTGCTGCTaGAGTCCATGCAAGATATAT +
Preference number: 4 (lower is better)
Translates to: TLKVLLLLPAACVEEMNITCRCC*SPCKIY
Trigger: ATATATCTTGCATGGACTTCAGCAGCAACGGCAAGT...AATATTCATCTCTTCAACACACGCCGCGGGGAGAAGGAGGAGTACTTTGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
CDS-3UTR CCA 90 bp CAAAAGTCAAGTCAGCAATACACTCCCCATGGACACACTCAAAGTACTCCTCCTTCTGCTTCTGCTTCTTaGATCCTGACTTCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: QKSSQQYTPHGHTQSTPPSASAS*ILTSWV
Trigger: AACCCAAGAAGTCAGGATCCAAGAAGCAGAAGCAGA...AGGAGGAGTACTTTGAGTGTGTCCATGGGGAGTGTATTGCTGACTTGACTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
3UTR CAA 72 bp CTTCTTTCTTCTGTCTCTAAAGAGATGGGGTTTGTGTaGATCAAGCTGCCGGTGAACTCCTGGACTCATATG +
Preference number: 4 (lower is better)
Translates to: LLSSVSKEMGFV*IKLPVNSWTHM
Trigger: CATATGAGTCCAGGAGTTCACCGGCAGCTTGATCAACACAAACCCCATCTCTTTAGAGACAGAAGAAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR CAA 72 bp GGGTTAGCAAAGAATAGGAAGAATGGGATTGGACCATaGCAAAGAAAGATCACAGGAGTGGCTAAATTTCAC +
Preference number: 4 (lower is better)
Translates to: GLAKNRKNGIGP*QRKITGVAKFH
Trigger: GTGAAATTTAGCCACTCCTGTGATCTTTCTTTGCAATGGTCCAATCCCATTCTTCCTATTCTTTGCTAACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
3UTR CAA 72 bp TCTACACTGACAAAATTCTTTGGATGTCAGGGTCTTTaGCCAAACCATCAAAGGTTTTGCTCTGTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: STLTKFFGCQGL*PNHQRFCSVCL
Trigger: AAGACAGACAGAGCAAAACCTTTGATGGTTTGGCAAAAGACCCTGACATCCAAAGAATTTTGTCAGTGTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
CDS CCA 90 bp TGGGCTTCTCCTCGGCCCGCAGCCAGCCCCGCGCCACAGCCGCCGTaGCCACCAAGGCCAGCAGACCCACCAGGAGGGACAACCCCATCA +
Preference number: 5 (lower is better)
Translates to: WASPRPAASPAPQPP*PPRPADPPGGTTPS
Trigger: TGATGGGGTTGTCCCTCCTGGTGGGTCTGCTGGCCTTGGTGGCCACGGCGGCTGTGGCGCGGGGCTGGCTGCGGGCCGAGGAGAAGCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000005508.14
ENSMUST00000139565.8
ENSMUST00000153183.8
ENSMUST00000201780.2
CDS CCA 90 bp TCTTGTCCCTGGGGTGCACCTGCAACCCGAAACAGACGGGCTGGCTaGGCTTCTCCTCGGCCCGCAGCCAGCCCCGCGCCACAGCCGCCG +
Preference number: 5 (lower is better)
Translates to: SCPWGAPATRNRRAG*ASPRPAASPAPQPP
Trigger: CGGCGGCTGTGGCGCGGGGCTGGCTGCGGGCCGAGGAGAAGCCCAGCCAGCCCGTCTGTTTCGGGTTGCAGGTGCACCCCAGGGACAAGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000139565.8
CDS CCA 90 bp ATCCTGACTTCTTGGGTTCGTTTTCTTTCTGACAGACGGGCTGGCTaGGCTTCTCCTCGGCCCGCAGCCAGCCCCGCGCCACAGCCGCCG +
Preference number: 5 (lower is better)
Translates to: ILTSWVRFLSDRRAG*ASPRPAASPAPQPP
Trigger: CGGCGGCTGTGGCGCGGGGCTGGCTGCGGGCCGAGGAGAAGCCCAGCCAGCCCGTCTGTCAGAAAGAAAACGAACCCAAGAAGTCAGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000005508.14
ENSMUST00000153183.8
CDS-3UTR CAA 90 bp TTAGCTGTTGCTGCAGCCTCTGGCGGGTACTTTCGCTGGATGCCCGCTTCAGGATGGTCCAGCTCCACGTaGGCTCTCATGCTGCGGTGC +
Preference number: 5 (lower is better)
Translates to: LAVAAASGGYFRWMPASGWSSST*ALMLRC
Trigger: GCACCGCAGCATGAGAGCCAACGTGGAGCTGGACCA...TCCTGAAGCGGGCATCCAGCGAAAGTACCCGCCAGAGGCTGCAGCAACAGCTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
CDS TCA 90 bp TGCTTCTGCTTCTTGGATCCTGACTTCTTGGGTTCGTTTTCTTTCTaGCAGACGGGCTGGCTGGGCTTCTCCTCGGCCCGCAGCCAGCCC +
Preference number: 5 (lower is better)
Translates to: CFCFLDPDFLGSFSF*QTGWLGFSSARSQP
Trigger: GGGCTGGCTGCGGGCCGAGGAGAAGCCCAGCCAGCCCGTCTGTCAGAAAGAAAACGAACCCAAGAAGTCAGGATCCAAGAAGCAGAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000005508.14
ENSMUST00000153183.8
CDS-3UTR CAA 90 bp GGGTTTTTCTGTGTAGCCCAGGTGGTGTGGAACTCACTCTGTAGACTAGGCTGGCGGTGGCCAGGGGTATaGTGGAAGAGCCGCACTGCA +
Preference number: 5 (lower is better)
Translates to: GFFCVAQVVWNSLCRLGWRWPGV*WKSRTA
Trigger: TGCAGTGCGGCTCTTCCACAATACCCCTGGCCACCG...CCAGCCTAGTCTACAGAGTGAGTTCCACACCACCTGGGCTACACAGAAAAACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
CDS-3UTR CAA 90 bp AAAAGCACATCACAGACACCAGCCTCTAGGTCCTCCCACCAGCTTTTACCCTTGTGGTCCAGCTCCACGTaGGCTCTCATGCTGCGGTGC +
Preference number: 5 (lower is better)
Translates to: KSTSQTPASRSSHQLLPLWSSST*ALMLRC
Trigger: GCACCGCAGCATGAGAGCCAACGTGGAGCTGGACCA...CAAGGGTAAAAGCTGGTGGGAGGACCTAGAGGCTGGTGTCTGTGATGTGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
CDS-3UTR CAA 90 bp GAGCTGCTGGGCCAGACAGCCAGACCCATCTGGAGCCAGAGTCACTTCTTCAGGTTCTGCTTCTGCTTCTaGGATCCTGACTTCTTGGGT +
Preference number: 5 (lower is better)
Translates to: ELLGQTARPIWSQSHFFRFCFCF*DPDFLG
Trigger: ACCCAAGAAGTCAGGATCCAAGAAGCAGAAGCAGAA...CCTGAAGAAGTGACTCTGGCTCCAGATGGGTCTGGCTGTCTGGCCCAGCAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
CDS-3UTR CAA 90 bp CTGGAGCTTGCTGACTGGGTCACACTGGCTGGAGTTACAATTGTCAACCACCATCGGAGGGTGTCCCCATaGGCCAGCCAAACAATGAAG +
Preference number: 5 (lower is better)
Translates to: LELADWVTLAGVTIVNHHRRVSP*ASQTMK
Trigger: CTTCATTGTTTGGCTGGCCAATGGGGACACCCTCCG...ATGGTGGTTGACAATTGTAACTCCAGCCAGTGTGACCCAGTCAGCAAGCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
CDS-3UTR CAA 90 bp GAACAAAAAGCACATCACAGACACCAGCCTCTAGGTCCTCCCACCAGCTTTTACGGGTCCTGCTGCTTCTaGTACTCCACATCTGTGTCC +
Preference number: 5 (lower is better)
Translates to: EQKAHHRHQPLGPPTSFYGSCCF*YSTSVS
Trigger: GGACACAGATGTGGAGTACAAGAAGCAGCAGGACCC...GTAAAAGCTGGTGGGAGGACCTAGAGGCTGGTGTCTGTGATGTGCTTTTTGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
CDS CCA 90 bp GCTGAGGCTTCTCCTTACGAACCCGCTGATTCTGCTTCTGCTTCTTaGATCCTGACTTCTTGGGTTCGTTTTCTTTCTGACAGACGGGCT +
Preference number: 5 (lower is better)
Translates to: AEASPYEPADSASAS*ILTSWVRFLSDRRA
Trigger: AGCCCGTCTGTCAGAAAGAAAACGAACCCAAGAAGTCAGGATCCAAGAAGCAGAAGCAGAATCAGCGGGTTCGTAAGGAGAAGCCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000005508.14
ENSMUST00000153183.8
CDS-3UTR CAA 90 bp AACACTCCTAGCCTCACAGCATCTTTGCAGGAAGGCCACAGAGAGCATCGTTCCTTCTGCTTCTGCTTCTaGGATCCTGACTTCTTGGGT +
Preference number: 5 (lower is better)
Translates to: NTPSLTASLQEGHREHRSFCFCF*DPDFLG
Trigger: ACCCAAGAAGTCAGGATCCAAGAAGCAGAAGCAGAA...GGAACGATGCTCTCTGTGGCCTTCCTGCAAAGATGCTGTGAGGCTAGGAGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
CDS CCA 90 bp GCTGAGGCTTCTCCTTACGAACCCGCTGATTCTGCTTCTGCTTCTTaGATCCTGACTTCTTGGGTTCGTTTTCTTTCTGACCTACAAGGA +
Preference number: 5 (lower is better)
Translates to: AEASPYEPADSASAS*ILTSWVRFLSDLQG
Trigger: TCCTTGTAGGTCAGAAAGAAAACGAACCCAAGAAGTCAGGATCCAAGAAGCAGAAGCAGAATCAGCGGGTTCGTAAGGAGAAGCCTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152013.2
CDS-3UTR CAA 90 bp ACCCCTGATCCTCTCACCTTTGCCTGTATAGTGCTGATATTACAGACCAATGCCATCCTTCGAGAGTCATaGGAGAAAGCGAAAGAGTGG +
Preference number: 5 (lower is better)
Translates to: TPDPLTFACIVLILQTNAILRES*EKAKEW
Trigger: CCACTCTTTCGCTTTCTCCAATGACTCTCGAAGGAT...GGCATTGGTCTGTAATATCAGCACTATACAGGCAAAGGTGAGAGGATCAGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8
CDS CCA 72 bp TCCCTGGGGTGCACCTGCAACCCGAAACAGACGGGCTaGCTGGGCTTCTCCTCGGCCCGCAGCCAGCCCCGC +
Preference number: 6 (lower is better)
Translates to: SLGCTCNPKQTG*LGFSSARSQPR
Trigger: GCGGGGCTGGCTGCGGGCCGAGGAGAAGCCCAGCCAGCCCGTCTGTTTCGGGTTGCAGGTGCACCCCAGGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000139565.8
CDS CCA 72 bp TCCCTGCAGTCAGGGCTGAAGCGTACCAAGGTGGCATaGTCCAGCTCCACGTTGGCTCTCATGCTGCGGTGC +
Preference number: 6 (lower is better)
Translates to: SLQSGLKRTKVA*SSSTLALMLRC
Trigger: GCACCGCAGCATGAGAGCCAACGTGGAGCTGGACCATGCCACCTTGGTACGCTTCAGCCCTGACTGCAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
CDS TCA 72 bp GGAGGCCGTCATGATGAACTTCCCTGCAGTCAGGGCTaGAGCGTACCAAGGTGGCATGGTCCAGCTCCACGT +
Preference number: 6 (lower is better)
Translates to: GGRHDELPCSQG*SVPRWHGPAPR
Trigger: ACGTGGAGCTGGACCATGCCACCTTGGTACGCTTCAGCCCTGACTGCAGGGAAGTTCATCATGACGGCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005508.14
CDS CAA 72 bp CCACGTAGCAGCGCAGCTCCCAGGTTCCAAAGAATCTaGTCCCTGGGGTGCACCTGCAACCCGAAACAGACG +
Preference number: 6 (lower is better)
Translates to: PRSSAAPRFQRI*SLGCTCNPKQT
Trigger: CGTCTGTTTCGGGTTGCAGGTGCACCCCAGGGACAAGATTCTTTGGAACCTGGGAGCTGCGCTGCTACGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000139565.8
CDS TCA 72 bp TTCTTGGATCCTGACTTCTTGGGTTCGTTTTCTTTCTaGCAGACGGGCTGGCTGGGCTTCTCCTCGGCCCGC +
Preference number: 6 (lower is better)
Translates to: FLDPDFLGSFSF*QTGWLGFSSAR
Trigger: GCGGGCCGAGGAGAAGCCCAGCCAGCCCGTCTGTCAGAAAGAAAACGAACCCAAGAAGTCAGGATCCAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000005508.14
ENSMUST00000153183.8
CDS TCA 72 bp TTGTTCATCTGGTTAGTGTTGATCGTGGAAAGCACCTaGCCTTTCAGATTCCATATGAGGACAGTTGTGTCA +
Preference number: 6 (lower is better)
Translates to: LFIWLVLIVEST*PFRFHMRTVVS
Trigger: TGACACAACTGTCCTCATATGGAATCTGAAAGGTCAGGTGCTTTCCACGATCAACACTAACCAGATGAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153183.8