Pregenerated sensors for TBL1X (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025246Ensembl transcript IDs: ENSMUST00000088217.12
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | TGCAGACTGAGCTGTCTTATGGGGGTGAACTTCAGGGGTGTGGGCTaGATTCTTCTGCTTGGTCCTCGTGTGGCCAGCACTAACTTCCTG | + |
Preference number: 1 (lower is better) Translates to: CRLSCLMGVNFRGVG*ILLLGPRVASTNFL Trigger: CAGGAAGTTAGTGCTGGCCACACGAGGACCAAGCAGAAGAATGCAGCCCACACCCCTGAAGTTCACCCCCATAAGACAGCTCAGTCTGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR TCA 90 bp | CACTGTGTGCATGTGGCCATTATCTATGCAGGATTTCATTACAAGTaGGACCACACCAGAGCAAGGACATCAGAGGAAGGGGCGGGCAAC | + |
Preference number: 1 (lower is better) Translates to: HCVHVAIIYAGFHYK*DHTRARTSEEGAGN Trigger: GTTGCCCGCCCCTTCCTCTGATGTCCTTGCTCTGGTGTGGTCTCACTTGTAATGAAATCCTGCATAGATAATGGCCACATGCACACAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR CCA 90 bp | ATGCACCTGCTCTATGACAGCAGGCAAATGATAGCGTCCAAATACTaGACGCTTCCAAACAGCTGCAGACTGAGCTGTCTTATGGGGGTG | + |
Preference number: 1 (lower is better) Translates to: MHLLYDSRQMIASKY*TLPNSCRLSCLMGV Trigger: CACCCCCATAAGACAGCTCAGTCTGCAGCTGTTTGGAAGCGTCCAGTATTTGGACGCTATCATTTGCCTGCTGTCATAGAGCAGGTGCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR GCA 90 bp | GACAGAGTAAGCAATAGGTGGGAGTGGGGCAAGAGGGAAGGAGAGTaGTGTCCAACAAAGATCCACTGTGTGCATGTGGCCATTATCTAT | + |
Preference number: 1 (lower is better) Translates to: DRVSNRWEWGKREGE*CPTKIHCVHVAIIY Trigger: ATAGATAATGGCCACATGCACACAGTGGATCTTTGTTGGACAGCACTCTCCTTCCCTCTTGCCCCACTCCCACCTATTGCTTACTCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR GCA 90 bp | GGCTTCATATATGTATACTTTTCTCTAAGTAACACTTGCCTCAGCTaGAGGCTGAACCCTGCACACTGTCTCTTGCAACCCCCTTCTGGT | + |
Preference number: 1 (lower is better) Translates to: GFIYVYFSLSNTCLS*RLNPAHCLLQPPSG Trigger: ACCAGAAGGGGGTTGCAAGAGACAGTGTGCAGGGTTCAGCCTGCAGCTGAGGCAAGTGTTACTTAGAGAAAAGTATACATATATGAAGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR CCA 90 bp | TTTCTTAGTCAGACAGAACAAAAAGTCAAGTCCTATGGTGTTGAGTaGGGTCAGAGAGTTGAACTTTGTAAGGTCCATCTGGCCCTTCGG | + |
Preference number: 1 (lower is better) Translates to: FLSQTEQKVKSYGVE*GQRVELCKVHLALR Trigger: CCGAAGGGCCAGATGGACCTTACAAAGTTCAACTCTCTGACCCCACTCAACACCATAGGACTTGACTTTTTGTTCTGTCTGACTAAGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR GCA 90 bp | TTGATTTTTGGCTTCATATATGTATACTTTTCTCTAAGTAACACTTaGCTCAGCTGCAGGCTGAACCCTGCACACTGTCTCTTGCAACCC | + |
Preference number: 1 (lower is better) Translates to: LIFGFIYVYFSLSNT*LSCRLNPAHCLLQP Trigger: GGGTTGCAAGAGACAGTGTGCAGGGTTCAGCCTGCAGCTGAGGCAAGTGTTACTTAGAGAAAAGTATACATATATGAAGCCAAAAATCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR TCA 90 bp | AACAAGTCAGTGTCAAGTTATGACAAGAAACAAACAAAGGCCACCTaGTTTAGTGATGGCAAACTTTACCAGGCACACTATGCCTTATTT | + |
Preference number: 1 (lower is better) Translates to: NKSVSSYDKKQTKAT*FSDGKLYQAHYALF Trigger: AAATAAGGCATAGTGTGCCTGGTAAAGTTTGCCATCACTAAATCAGGTGGCCTTTGTTTGTTTCTTGTCATAACTTGACACTGACTTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR TCA 90 bp | ATACATGTTTTGGTGCTAACATTTGTTTGTTGTGTAGGGAGCACTTaGCCTTCCTTGCTGGTTGATTTTTGGCTTCATATATGTATACTT | + |
Preference number: 1 (lower is better) Translates to: IHVLVLTFVCCVGST*PSLLVDFWLHICIL Trigger: AAGTATACATATATGAAGCCAAAAATCAACCAGCAAGGAAGGTCAAGTGCTCCCTACACAACAAACAAATGTTAGCACCAAAACATGTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR-3UTR GCA 90 bp | CTGCAGGCTGAACCCTGCACACTGTCTCTTGCAACCCCCTTCTGGTCTGTCCCCTTCTTCCCCACCAGCTaGCAAAGCAATCGCCTTGTT | + |
Preference number: 2 (lower is better) Translates to: LQAEPCTLSLATPFWSVPFFPTS*QSNRLV Trigger: AACAAGGCGATTGCTTTGGCAGCTGGTGGGGAAGAA...GGGGACAGACCAGAAGGGGGTTGCAAGAGACAGTGTGCAGGGTTCAGCCTGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR-3UTR GCA 90 bp | GACGCTTCCAAACAGCTGCAGACTGAGCTGTCTTATGGGGGTGAACTTCAGGGGCTGCAGGCTGAACCCTaGACACTGTCTCTTGCAACC | + |
Preference number: 2 (lower is better) Translates to: DASKQLQTELSYGGELQGLQAEP*TLSLAT Trigger: GGTTGCAAGAGACAGTGTGCAGGGTTCAGCCTGCAG...CCCCTGAAGTTCACCCCCATAAGACAGCTCAGTCTGCAGCTGTTTGGAAGCGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR-3UTR CCA 90 bp | GACGCTTCCAAACAGCTGCAGACTGAGCTGTCTTATGGGGGTGAACTTCAGGGGCTAGGGGGTGTAGCCTaGACACCCAGAGATTGTCTG | + |
Preference number: 2 (lower is better) Translates to: DASKQLQTELSYGGELQGLGGVA*TPRDCL Trigger: CAGACAATCTCTGGGTGTCCAGGCTACACCCCCTAG...CCCCTGAAGTTCACCCCCATAAGACAGCTCAGTCTGCAGCTGTTTGGAAGCGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR-3UTR TCA 90 bp | TTAGTCAGACAGAACAAAAAGTCAAGTCCTATGGTGTTGAGTGGGGTCAGAGAGGCCTCAGCTGCAGGCTaGACCCTGCACACTGTCTCT | + |
Preference number: 2 (lower is better) Translates to: LVRQNKKSSPMVLSGVREASAAG*TLHTVS Trigger: AGAGACAGTGTGCAGGGTTCAGCCTGCAGCTGAGGC...CTCTCTGACCCCACTCAACACCATAGGACTTGACTTTTTGTTCTGTCTGACTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR-3UTR CCA 90 bp | TGTGGCTTAGATTCATCTAGGGGGTGTAGCCTGGACACCCAGAGATTGTCTGATCACACTTGGTCAGGGTaGCTTCTTCACTGTGTTCCC | + |
Preference number: 2 (lower is better) Translates to: CGLDSSRGCSLDTQRLSDHTWSG*LLHCVP Trigger: GGGAACACAGTGAAGAAGCCACCCTGACCAAGTGTG...ATCAGACAATCTCTGGGTGTCCAGGCTACACCCCCTAGATGAATCTAAGCCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR-3UTR TCA 90 bp | TGGACGCTTCCAAACAGCTGCAGACTGAGCTGTCTTATGGGGGTGAACTTCAGGATTGAAATTCTCCCTTaGGACTCACTGTCTTCACAA | + |
Preference number: 2 (lower is better) Translates to: WTLPNSCRLSCLMGVNFRIEILP*DSLSSQ Trigger: TTGTGAAGACAGTGAGTCTCAAGGGAGAATTTCAAT...CCTGAAGTTCACCCCCATAAGACAGCTCAGTCTGCAGCTGTTTGGAAGCGTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR-3UTR CCA 90 bp | GAAAATGTTGAAAGAGGACCATGTCTGGCTGTACGTCTGACACAGACAATAAAAAGTTTGCATCTGAGGTaGGAGGCCCCCAGACCACAG | + |
Preference number: 2 (lower is better) Translates to: ENVERGPCLAVRLTQTIKSLHLR*EAPRPQ Trigger: CTGTGGTCTGGGGGCCTCCCACCTCAGATGCAAACT...TTTTATTGTCTGTGTCAGACGTACAGCCAGACATGGTCCTCTTTCAACATTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR CAA 90 bp | ACAGGTGATTTCCAAGTAGACTCGAACAAGTCAAGTTCACACAGTTaGGAGCCCATCATAGGAAGGGTGCTGCAATCCCACACATTCACT | + |
Preference number: 2 (lower is better) Translates to: TGDFQVDSNKSSSHS*EPIIGRVLQSHTFT Trigger: AGTGAATGTGTGGGATTGCAGCACCCTTCCTATGATGGGCTCCAAACTGTGTGAACTTGACTTGTTCGAGTCTACTTGGAAATCACCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR CAA 90 bp | TGTGGCTTAGATTCATCTAGGGGGTGTAGCCTGGACACCCAGAGATaGTCTGATGAACTCCTTATGTGTCATCTACCCATTACCACCATA | + |
Preference number: 2 (lower is better) Translates to: CGLDSSRGCSLDTQR*SDELLMCHLPITTI Trigger: TATGGTGGTAATGGGTAGATGACACATAAGGAGTTCATCAGACAATCTCTGGGTGTCCAGGCTACACCCCCTAGATGAATCTAAGCCACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR-3UTR CCA 90 bp | GAAAATGTTGAAAGAGGACCATGTCTGGCTGTACGTCTGACACAGACAATAAAAAGCAATAGGTGGGAGTaGGGCAAGAGGGAAGGAGAG | + |
Preference number: 2 (lower is better) Translates to: ENVERGPCLAVRLTQTIKSNRWE*GKREGE Trigger: CTCTCCTTCCCTCTTGCCCCACTCCCACCTATTGCT...TTTTATTGTCTGTGTCAGACGTACAGCCAGACATGGTCCTCTTTCAACATTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR-3UTR TCA 90 bp | TTAGTCAGACAGAACAAAAAGTCAAGTCCTATGGTGTTGAGTGGGGTCAGAGAGGGATTTCATTACAAGTaGGACCACACCAGAGCAAGG | + |
Preference number: 2 (lower is better) Translates to: LVRQNKKSSPMVLSGVREGFHYK*DHTRAR Trigger: CCTTGCTCTGGTGTGGTCTCACTTGTAATGAAATCC...CTCTCTGACCCCACTCAACACCATAGGACTTGACTTTTTGTTCTGTCTGACTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR-3UTR TCA 90 bp | GAAAATGTTGAAAGAGGACCATGTCTGGCTGTACGTCTGACACAGACAATAAAAAAGACTGAGGGACACTaGGGCCTTTGGGTCTTAGGT | + |
Preference number: 2 (lower is better) Translates to: ENVERGPCLAVRLTQTIKKTEGH*GLWVLG Trigger: ACCTAAGACCCAAAGGCCTCAGTGTCCCTCAGTCTT...TTTTATTGTCTGTGTCAGACGTACAGCCAGACATGGTCCTCTTTCAACATTTTC 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR-3UTR GCA 90 bp | GAAAATGTTGAAAGAGGACCATGTCTGGCTGTACGTCTGACACAGACAATAAAATTCAGGGGTGTGGGCTaGATTCTTCTGCTTGGTCCT | + |
Preference number: 2 (lower is better) Translates to: ENVERGPCLAVRLTQTIKFRGVG*ILLLGP Trigger: AGGACCAAGCAGAAGAATGCAGCCCACACCCCTGAA...TTTTATTGTCTGTGTCAGACGTACAGCCAGACATGGTCCTCTTTCAACATTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR-3UTR CCA 90 bp | TGGACGCTTCCAAACAGCTGCAGACTGAGCTGTCTTATGGGGGTGAACTTCAGGGAACAGAAATGTATTTaGGGAACAATGATAGGACTT | + |
Preference number: 2 (lower is better) Translates to: WTLPNSCRLSCLMGVNFREQKCI*GTMIGL Trigger: AAGTCCTATCATTGTTCCCCAAATACATTTCTGTTC...CCTGAAGTTCACCCCCATAAGACAGCTCAGTCTGCAGCTGTTTGGAAGCGTCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR CAA 90 bp | GTCTATTTCTTAGTCAGACAGAACAAAAAGTCAAGTCCTATGGTGTaGAGTGGGGTCAGAGAGTTGAACTTTGTAAGGTCCATCTGGCCC | + |
Preference number: 2 (lower is better) Translates to: VYFLVRQNKKSSPMV*SGVRELNFVRSIWP Trigger: GGGCCAGATGGACCTTACAAAGTTCAACTCTCTGACCCCACTCAACACCATAGGACTTGACTTTTTGTTCTGTCTGACTAAGAAATAGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR-3UTR TCA 90 bp | TTAGTCAGACAGAACAAAAAGTCAAGTCCTATGGTGTTGAGTGGGGTCAGAGAGGTAGCTACACTGTTGTaGGAAAGATGTAGCTGGCAA | + |
Preference number: 2 (lower is better) Translates to: LVRQNKKSSPMVLSGVREVATLL*ERCSWQ Trigger: TTGCCAGCTACATCTTTCTCACAACAGTGTAGCTAC...CTCTCTGACCCCACTCAACACCATAGGACTTGACTTTTTGTTCTGTCTGACTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR-3UTR TCA 90 bp | TTAGTCAGACAGAACAAAAAGTCAAGTCCTATGGTGTTGAGTGGGGTCAGAGAGGGCAGAAATGATCAGTaGCATTCTACCTGGGTCTTA | + |
Preference number: 2 (lower is better) Translates to: LVRQNKKSSPMVLSGVREGRNDQ*HSTWVL Trigger: TAAGACCCAGGTAGAATGTCACTGATCATTTCTGCC...CTCTCTGACCCCACTCAACACCATAGGACTTGACTTTTTGTTCTGTCTGACTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR-3UTR TCA 90 bp | GAAAATGTTGAAAGAGGACCATGTCTGGCTGTACGTCTGACACAGACAATAAAAGATGCACCTGCTCTATaGCAGCAGGCAAATGATAGC | + |
Preference number: 2 (lower is better) Translates to: ENVERGPCLAVRLTQTIKDAPAL*QQANDS Trigger: GCTATCATTTGCCTGCTGTCATAGAGCAGGTGCATC...TTTTATTGTCTGTGTCAGACGTACAGCCAGACATGGTCCTCTTTCAACATTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR-3UTR GCA 90 bp | GAAAATGTTGAAAGAGGACCATGTCTGGCTGTACGTCTGACACAGACAATAAAAAAGAGGGAAGGAGAGTaGTGTCCAACAAAGATCCAC | + |
Preference number: 2 (lower is better) Translates to: ENVERGPCLAVRLTQTIKKREGE*CPTKIH Trigger: GTGGATCTTTGTTGGACAGCACTCTCCTTCCCTCTT...TTTTATTGTCTGTGTCAGACGTACAGCCAGACATGGTCCTCTTTCAACATTTTC 43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR-3UTR CCA 90 bp | CTCTGGGCAGGAAACTTCATATCCTTTGACACAGAGACATCTGCTATGATTAAAAGAGCCTGTTCTGGATaGAAACCAACCATGCACCAT | + |
Preference number: 2 (lower is better) Translates to: LWAGNFISFDTETSAMIKRACSG*KPTMHH Trigger: ATGGTGCATGGTTGGTTTCCATCCAGAACAGGCTCT...TTTAATCATAGCAGATGTCTCTGTGTCAAAGGATATGAAGTTTCCTGCCCAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR-3UTR CCA 90 bp | GAAAATGTTGAAAGAGGACCATGTCTGGCTGTACGTCTGACACAGACAATAAAAGGCCAGGGAAGTGAATaGTCTTTAGGTTTCTTCTTG | + |
Preference number: 2 (lower is better) Translates to: ENVERGPCLAVRLTQTIKGQGSE*SLGFFL Trigger: CAAGAAGAAACCTAAAGACCATTCACTTCCCTGGCC...TTTTATTGTCTGTGTCAGACGTACAGCCAGACATGGTCCTCTTTCAACATTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR-3UTR GCA 90 bp | TTAGTCAGACAGAACAAAAAGTCAAGTCCTATGGTGTTGAGTGGGGTCAGAGAGTGTGGCCATTATCTATaGAGGATTTCATTACAAGTG | + |
Preference number: 2 (lower is better) Translates to: LVRQNKKSSPMVLSGVRECGHYL*RISLQV Trigger: CACTTGTAATGAAATCCTGCATAGATAATGGCCACA...CTCTCTGACCCCACTCAACACCATAGGACTTGACTTTTTGTTCTGTCTGACTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR-3UTR GCA 90 bp | CTCTGGGCAGGAAACTTCATATCCTTTGACACAGAGACATCTGCTATGATTAAACAAAGATCCACTGTGTaGATGTGGCCATTATCTATG | + |
Preference number: 2 (lower is better) Translates to: LWAGNFISFDTETSAMIKQRSTV*MWPLSM Trigger: CATAGATAATGGCCACATGCACACAGTGGATCTTTG...TTTAATCATAGCAGATGTCTCTGTGTCAAAGGATATGAAGTTTCCTGCCCAGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR-3UTR CCA 90 bp | TTAGTCAGACAGAACAAAAAGTCAAGTCCTATGGTGTTGAGTGGGGTCAGAGAGACAAACTGGTCTTTTTaGAAAGCAACTGTAGTATCC | + |
Preference number: 2 (lower is better) Translates to: LVRQNKKSSPMVLSGVRETNWSF*KATVVS Trigger: GGATACTACAGTTGCTTTCCAAAAAGACCAGTTTGT...CTCTCTGACCCCACTCAACACCATAGGACTTGACTTTTTGTTCTGTCTGACTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR-3UTR GCA 90 bp | CTCTGGGCAGGAAACTTCATATCCTTTGACACAGAGACATCTGCTATGATTAAAATAAAGCACTTACTATaGTCTGAAAGTGCCTTTGGG | + |
Preference number: 2 (lower is better) Translates to: LWAGNFISFDTETSAMIKIKHLL*SESAFG Trigger: CCCAAAGGCACTTTCAGAGCATAGTAAGTGCTTTAT...TTTAATCATAGCAGATGTCTCTGTGTCAAAGGATATGAAGTTTCCTGCCCAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR-3UTR CCA 90 bp | CACATTTTCATTGGTACAAACTGGTCTTTTTGGAAAGCAACTGTAGTATCCAAATGTGTTTTAAACTTCTaGATGGAGATTAGGGGAGGG | + |
Preference number: 2 (lower is better) Translates to: HIFIGTNWSFWKATVVSKCVLNF*MEIRGG Trigger: CCCTCCCCTAATCTCCATCCAGAAGTTTAAAACACA...TTTGGATACTACAGTTGCTTTCCAAAAAGACCAGTTTGTACCAATGAAAATGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR GCA 72 bp | AGCTGTCTTATGGGGGTGAACTTCAGGGGTGTGGGCTaGATTCTTCTGCTTGGTCCTCGTGTGGCCAGCACT | + |
Preference number: 3 (lower is better) Translates to: SCLMGVNFRGVG*ILLLGPRVAST Trigger: AGTGCTGGCCACACGAGGACCAAGCAGAAGAATGCAGCCCACACCCCTGAAGTTCACCCCCATAAGACAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR GCA 72 bp | AGCAATAGGTGGGAGTGGGGCAAGAGGGAAGGAGAGTaGTGTCCAACAAAGATCCACTGTGTGCATGTGGCC | + |
Preference number: 3 (lower is better) Translates to: SNRWEWGKREGE*CPTKIHCVHVA Trigger: GGCCACATGCACACAGTGGATCTTTGTTGGACAGCACTCTCCTTCCCTCTTGCCCCACTCCCACCTATTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR-3UTR CAA 90 bp | TCATTACAAGTGAGACCACACCAGAGCAAGGACATCAGAGGAAGGGGCGGGCAATCAAGTTCACACAGTTaGGAGCCCATCATAGGAAGG | + |
Preference number: 3 (lower is better) Translates to: SLQVRPHQSKDIRGRGGQSSSHS*EPIIGR Trigger: CCTTCCTATGATGGGCTCCAAACTGTGTGAACTTGA...TTGCCCGCCCCTTCCTCTGATGTCCTTGCTCTGGTGTGGTCTCACTTGTAATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR-3UTR CAA 90 bp | CTGCAGGCTGAACCCTGCACACTGTCTCTTGCAACCCCCTTCTGGTCTGTCCCCTACAAACTGGTCTTTTaGGAAAGCAACTGTAGTATC | + |
Preference number: 3 (lower is better) Translates to: LQAEPCTLSLATPFWSVPYKLVF*ESNCSI Trigger: GATACTACAGTTGCTTTCCAAAAAGACCAGTTTGTA...GGGGACAGACCAGAAGGGGGTTGCAAGAGACAGTGTGCAGGGTTCAGCCTGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR TCA 72 bp | CTGTTCTGGATGGAAACCAACCATGCACCATGTAGCTaGTGGCTTCATCCTTCCCCAGCTGAGCATTCTAGG | + |
Preference number: 3 (lower is better) Translates to: LFWMETNHAPCS*WLHPSPAEHSR Trigger: CCTAGAATGCTCAGCTGGGGAAGGATGAAGCCATCAGCTACATGGTGCATGGTTGGTTTCCATCCAGAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR GCA 72 bp | TGGCCCTTCGGTCCTCTACAGGCAGCATCCTGGATGTaGTGGGAATGGTATATGGTTACTTCAAACTCAAGG | + |
Preference number: 3 (lower is better) Translates to: WPFGPLQAASWM*WEWYMVTSNSR Trigger: CCTTGAGTTTGAAGTAACCATATACCATTCCCAGCACATCCAGGATGCTGCCTGTAGAGGACCGAAGGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR CCA 72 bp | TCCATCTGGCCCTTCGGTCCTCTACAGGCAGCATCCTaGATGTGCTGGGAATGGTATATGGTTACTTCAAAC | + |
Preference number: 3 (lower is better) Translates to: SIWPFGPLQAAS*MCWEWYMVTSN Trigger: GTTTGAAGTAACCATATACCATTCCCAGCACATCCAGGATGCTGCCTGTAGAGGACCGAAGGGCCAGATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR TCA 72 bp | CCACCCCTTGACCACAAAGATGATGCACCTGCTCTATaGCAGCAGGCAAATGATAGCGTCCAAATACTGGAC | + |
Preference number: 3 (lower is better) Translates to: PPLDHKDDAPAL*QQANDSVQILD Trigger: GTCCAGTATTTGGACGCTATCATTTGCCTGCTGTCATAGAGCAGGTGCATCATCTTTGTGGTCAAGGGGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR GCA 72 bp | ATGATAGCGTCCAAATACTGGACGCTTCCAAACAGCTaGAGACTGAGCTGTCTTATGGGGGTGAACTTCAGG | + |
Preference number: 3 (lower is better) Translates to: MIASKYWTLPNS*RLSCLMGVNFR Trigger: CCTGAAGTTCACCCCCATAAGACAGCTCAGTCTGCAGCTGTTTGGAAGCGTCCAGTATTTGGACGCTATCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR CCA 72 bp | CTCCTTCCCTGTTCAGTCATTAGAGCCTGTTCTGGATaGAAACCAACCATGCACCATGTAGCTGATGGCTTC | + |
Preference number: 3 (lower is better) Translates to: LLPCSVIRACSG*KPTMHHVADGF Trigger: GAAGCCATCAGCTACATGGTGCATGGTTGGTTTCCATCCAGAACAGGCTCTAATGACTGAACAGGGAAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR TCA 72 bp | CTTGAGACTCACTGTCTTCACAAGACTGAGGGACACTaGGGCCTTTGGGTCTTAGGTTTTGCAAGATTCACC | + |
Preference number: 3 (lower is better) Translates to: LETHCLHKTEGH*GLWVLGFARFT Trigger: GGTGAATCTTGCAAAACCTAAGACCCAAAGGCCTCAGTGTCCCTCAGTCTTGTGAAGACAGTGAGTCTCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR CCA 72 bp | CTCTATGACAGCAGGCAAATGATAGCGTCCAAATACTaGACGCTTCCAAACAGCTGCAGACTGAGCTGTCTT | + |
Preference number: 3 (lower is better) Translates to: LYDSRQMIASKY*TLPNSCRLSCL Trigger: AAGACAGCTCAGTCTGCAGCTGTTTGGAAGCGTCCAGTATTTGGACGCTATCATTTGCCTGCTGTCATAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR CCA 72 bp | CCCTTCGGTCCTCTACAGGCAGCATCCTGGATGTGCTaGGAATGGTATATGGTTACTTCAAACTCAAGGAAA | + |
Preference number: 3 (lower is better) Translates to: PFGPLQAASWMC*EWYMVTSNSRK Trigger: TTTCCTTGAGTTTGAAGTAACCATATACCATTCCCAGCACATCCAGGATGCTGCCTGTAGAGGACCGAAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR-3UTR CAA 90 bp | TGGACGCTTCCAAACAGCTGCAGACTGAGCTGTCTTATGGGGGTGAACTTCAGGAGGCCAATACATGTTTaGGTGCTAACATTTGTTTGT | + |
Preference number: 3 (lower is better) Translates to: WTLPNSCRLSCLMGVNFRRPIHV*VLTFVC Trigger: ACAAACAAATGTTAGCACCAAAACATGTATTGGCCT...CCTGAAGTTCACCCCCATAAGACAGCTCAGTCTGCAGCTGTTTGGAAGCGTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
||
3UTR TCA 72 bp | CATGTGGCCATTATCTATGCAGGATTTCATTACAAGTaGGACCACACCAGAGCAAGGACATCAGAGGAAGGG | + |
Preference number: 3 (lower is better) Translates to: HVAIIYAGFHYK*DHTRARTSEEG Trigger: CCCTTCCTCTGATGTCCTTGCTCTGGTGTGGTCTCACTTGTAATGAAATCCTGCATAGATAATGGCCACATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
||
3UTR GCA 72 bp | TATGTATACTTTTCTCTAAGTAACACTTGCCTCAGCTaGAGGCTGAACCCTGCACACTGTCTCTTGCAACCC | + |
Preference number: 3 (lower is better) Translates to: YVYFSLSNTCLS*RLNPAHCLLQP Trigger: GGGTTGCAAGAGACAGTGTGCAGGGTTCAGCCTGCAGCTGAGGCAAGTGTTACTTAGAGAAAAGTATACATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
||
3UTR GCA 72 bp | GGGAAGGAGAGTGCTGTCCAACAAAGATCCACTGTGTaGATGTGGCCATTATCTATGCAGGATTTCATTACA | + |
Preference number: 3 (lower is better) Translates to: GKESAVQQRSTV*MWPLSMQDFIT Trigger: TGTAATGAAATCCTGCATAGATAATGGCCACATGCACACAGTGGATCTTTGTTGGACAGCACTCTCCTTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR CCA 72 bp | GAGAGTGCTGTCCAACAAAGATCCACTGTGTGCATGTaGCCATTATCTATGCAGGATTTCATTACAAGTGAG | + |
Preference number: 3 (lower is better) Translates to: ESAVQQRSTVCM*PLSMQDFITSE Trigger: CTCACTTGTAATGAAATCCTGCATAGATAATGGCCACATGCACACAGTGGATCTTTGTTGGACAGCACTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
||
3UTR CCA 72 bp | CAGACAGAACAAAAAGTCAAGTCCTATGGTGTTGAGTaGGGTCAGAGAGTTGAACTTTGTAAGGTCCATCTG | + |
Preference number: 3 (lower is better) Translates to: QTEQKVKSYGVE*GQRVELCKVHL Trigger: CAGATGGACCTTACAAAGTTCAACTCTCTGACCCCACTCAACACCATAGGACTTGACTTTTTGTTCTGTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
||
3UTR-3UTR CAA 90 bp | CTCTGGGCAGGAAACTTCATATCCTTTGACACAGAGACATCTGCTATGATTAAAATGTGTACCAAACAGTaGAGCATTCTGCTTGATGCC | + |
Preference number: 3 (lower is better) Translates to: LWAGNFISFDTETSAMIKMCTKQ*SILLDA Trigger: GGCATCAAGCAGAATGCTCAACTGTTTGGTACACAT...TTTAATCATAGCAGATGTCTCTGTGTCAAAGGATATGAAGTTTCCTGCCCAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
||
3UTR GCA 72 bp | CATCATAGGAAGGGTGCTGCAATCCCACACATTCACTaGTGCTCCATTAGAATGGTTTTGTTTTCTACATTT | + |
Preference number: 3 (lower is better) Translates to: HHRKGAAIPHIH*CSIRMVLFSTF Trigger: AAATGTAGAAAACAAAACCATTCTAATGGAGCAGCAGTGAATGTGTGGGATTGCAGCACCCTTCCTATGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
||
3UTR TCA 72 bp | GTGTCAAGTTATGACAAGAAACAAACAAAGGCCACCTaGTTTAGTGATGGCAAACTTTACCAGGCACACTAT | + |
Preference number: 3 (lower is better) Translates to: VSSYDKKQTKAT*FSDGKLYQAHY Trigger: ATAGTGTGCCTGGTAAAGTTTGCCATCACTAAATCAGGTGGCCTTTGTTTGTTTCTTGTCATAACTTGACAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR CCA 72 bp | AAGTCACACATTTTCATTGGTACAAACTGGTCTTTTTaGAAAGCAACTGTAGTATCCAAATTGATAGGAGGG | + |
Preference number: 3 (lower is better) Translates to: KSHIFIGTNWSF*KATVVSKLIGG Trigger: CCCTCCTATCAATTTGGATACTACAGTTGCTTTCCAAAAAGACCAGTTTGTACCAATGAAAATGTGTGACTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
||
CDS-3UTR CCA 90 bp | CTGCAGGCTGAACCCTGCACACTGTCTCTTGCAACCCCCTTCTGGTCTGTCCCCCAGGCTCCTGATGCTTaGTCAGAGTGTGGATGCAAA | + |
Preference number: 4 (lower is better) Translates to: LQAEPCTLSLATPFWSVPQAPDA*SECGCK Trigger: TTTGCATCCACACTCTGACCAAGCATCAGGAGCCTG...GGGGACAGACCAGAAGGGGGTTGCAAGAGACAGTGTGCAGGGTTCAGCCTGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
||
CDS-3UTR GCA 90 bp | TGTGGCTTAGATTCATCTAGGGGGTGTAGCCTGGACACCCAGAGATTGTCTGATGGCTGCAGCTGCTGCTaGTGCAGCTGCTGCATTGGC | + |
Preference number: 4 (lower is better) Translates to: CGLDSSRGCSLDTQRLSDGCSCC*CSCCIG Trigger: GCCAATGCAGCAGCTGCAGCAGCAGCAGCTGCAGCC...ATCAGACAATCTCTGGGTGTCCAGGCTACACCCCCTAGATGAATCTAAGCCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
||
CDS-3UTR CCA 90 bp | AGTTTGGAGCCCATCATAGGAAGGGTGCTGCAATCCCACACATTCACTGCTGCTTGGAGTTCGGGTTGCTaGTGGCTGGTCCTGTGGGAC | + |
Preference number: 4 (lower is better) Translates to: SLEPIIGRVLQSHTFTAAWSSGC*WLVLWD Trigger: GTCCCACAGGACCAGCCACCAGCAACCCGAACTCCA...AGCAGCAGTGAATGTGTGGGATTGCAGCACCCTTCCTATGATGGGCTCCAAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
||
3UTR CAA 72 bp | TGCCTCAGCTGCAGGCTGAACCCTGCACACTGTCTCTaGCAACCCCCTTCTGGTCTGTCCCCCATTACTAAT | + |
Preference number: 4 (lower is better) Translates to: CLSCRLNPAHCL*QPPSGLSPITN Trigger: ATTAGTAATGGGGGACAGACCAGAAGGGGGTTGCAAGAGACAGTGTGCAGGGTTCAGCCTGCAGCTGAGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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CDS-3UTR GCA 90 bp | CTGCAGGCTGAACCCTGCACACTGTCTCTTGCAACCCCCTTCTGGTCTGTCCCCTTCTCCCGAAAAGCTTaGTGTCTTGTCTGTACCACA | + |
Preference number: 4 (lower is better) Translates to: LQAEPCTLSLATPFWSVPFSRKA*CLVCTT Trigger: TGTGGTACAGACAAGACAGCAAGCTTTTCGGGAGAA...GGGGACAGACCAGAAGGGGGTTGCAAGAGACAGTGTGCAGGGTTCAGCCTGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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CDS-3UTR TCA 90 bp | TGGACGCTTCCAAACAGCTGCAGACTGAGCTGTCTTATGGGGGTGAACTTCAGGAAGCACTTGCTAACATaGTGTTGGAGTTCGGGTTGC | + |
Preference number: 4 (lower is better) Translates to: WTLPNSCRLSCLMGVNFRKHLLT*CWSSGC Trigger: GCAACCCGAACTCCAACATCATGTTAGCAAGTGCTT...CCTGAAGTTCACCCCCATAAGACAGCTCAGTCTGCAGCTGTTTGGAAGCGTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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CDS-3UTR CCA 90 bp | AGTTTGGAGCCCATCATAGGAAGGGTGCTGCAATCCCACACATTCACTGCTGCTGGCTTCTCCATTCTTTaGTGGGTTTTGCTGAGCAGC | + |
Preference number: 4 (lower is better) Translates to: SLEPIIGRVLQSHTFTAAGFSIL*WVLLSS Trigger: GCTGCTCAGCAAAACCCACCAAAGAATGGAGAAGCC...AGCAGCAGTGAATGTGTGGGATTGCAGCACCCTTCCTATGATGGGCTCCAAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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CDS-3UTR CCA 90 bp | TCATTACAAGTGAGACCACACCAGAGCAAGGACATCAGAGGAAGGGGCGGGCAATGTCAAAAGATCCACTaGCCAAATACTTCCCGTCGG | + |
Preference number: 4 (lower is better) Translates to: SLQVRPHQSKDIRGRGGQCQKIH*PNTSRR Trigger: CCGACGGGAAGTATTTGGCCAGTGGATCTTTTGACA...TTGCCCGCCCCTTCCTCTGATGTCCTTGCTCTGGTGTGGTCTCACTTGTAATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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CDS-3UTR TCA 90 bp | TGGACGCTTCCAAACAGCTGCAGACTGAGCTGTCTTATGGGGGTGAACTTCAGGAGGGCAGGTGCTGAATaGAAAGGAAACTGTTGTTTG | + |
Preference number: 4 (lower is better) Translates to: WTLPNSCRLSCLMGVNFRRAGAE*KGNCCL Trigger: CAAACAACAGTTTCCTTTTCATTCAGCACCTGCCCT...CCTGAAGTTCACCCCCATAAGACAGCTCAGTCTGCAGCTGTTTGGAAGCGTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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CDS-3UTR TCA 90 bp | CCAACCATGCACCATGTAGCTGATGGCTTCATCCTTCCCCAGCTGAGCATTCTATATATCTCTTTGCTGTaGGCCTGGAGGTCATGGACA | + |
Preference number: 4 (lower is better) Translates to: PTMHHVADGFILPQLSILYISLL*AWRSWT Trigger: TGTCCATGACCTCCAGGCTCACAGCAAAGAGATATA...TAGAATGCTCAGCTGGGGAAGGATGAAGCCATCAGCTACATGGTGCATGGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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CDS-3UTR CCA 90 bp | TCATTACAAGTGAGACCACACCAGAGCAAGGACATCAGAGGAAGGGGCGGGCAATCATTAGTATGTCCTTaGAAGGTTTTGACTGGGCGA | + |
Preference number: 4 (lower is better) Translates to: SLQVRPHQSKDIRGRGGQSLVCP*KVLTGR Trigger: TCGCCCAGTCAAAACCTTCCAAGGACATACTAATGA...TTGCCCGCCCCTTCCTCTGATGTCCTTGCTCTGGTGTGGTCTCACTTGTAATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR CAA 72 bp | TTCCAAGTAGACTCGAACAAGTCAAGTTCACACAGTTaGGAGCCCATCATAGGAAGGGTGCTGCAATCCCAC | + |
Preference number: 4 (lower is better) Translates to: FQVDSNKSSSHS*EPIIGRVLQSH Trigger: GTGGGATTGCAGCACCCTTCCTATGATGGGCTCCAAACTGTGTGAACTTGACTTGTTCGAGTCTACTTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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CDS-3UTR GCA 90 bp | TGTGGCTTAGATTCATCTAGGGGGTGTAGCCTGGACACCCAGAGATTGTCTGATATCATAGGAACCTGTTaGCAACAGTGTTCCATCGCT | + |
Preference number: 4 (lower is better) Translates to: CGLDSSRGCSLDTQRLSDIIGTC*QQCSIA Trigger: AGCGATGGAACACTGTTGGCAACAGGTTCCTATGAT...ATCAGACAATCTCTGGGTGTCCAGGCTACACCCCCTAGATGAATCTAAGCCACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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CDS-3UTR GCA 90 bp | TTAGTCAGACAGAACAAAAAGTCAAGTCCTATGGTGTTGAGTGGGGTCAGAGAGCCTTCACGTATACAGTaGCTCAGCACAAGCTGTGTG | + |
Preference number: 4 (lower is better) Translates to: LVRQNKKSSPMVLSGVREPSRIQ*LSTSCV Trigger: CACACAGCTTGTGCTGAGGCACTGTATACGTGAAGG...CTCTCTGACCCCACTCAACACCATAGGACTTGACTTTTTGTTCTGTCTGACTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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CDS-3UTR CCA 90 bp | TTAGTCAGACAGAACAAAAAGTCAAGTCCTATGGTGTTGAGTGGGGTCAGAGAGCTTCCCCATTCACGGTaGCTTCTCCATTCTTTGGTG | + |
Preference number: 4 (lower is better) Translates to: LVRQNKKSSPMVLSGVRELPHSR*LLHSLV Trigger: CACCAAAGAATGGAGAAGCCACCGTGAATGGGGAAG...CTCTCTGACCCCACTCAACACCATAGGACTTGACTTTTTGTTCTGTCTGACTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR CAA 72 bp | GATTCATCTAGGGGGTGTAGCCTGGACACCCAGAGATaGTCTGATGAACTCCTTATGTGTCATCTACCCATT | + |
Preference number: 4 (lower is better) Translates to: DSSRGCSLDTQR*SDELLMCHLPI Trigger: AATGGGTAGATGACACATAAGGAGTTCATCAGACAATCTCTGGGTGTCCAGGCTACACCCCCTAGATGAATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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CDS-3UTR TCA 90 bp | CTCTGGGCAGGAAACTTCATATCCTTTGACACAGAGACATCTGCTATGATTAAATTTGGTGGGTTTTGCTaGGCAGCAGCTGCTGGTGTT | + |
Preference number: 4 (lower is better) Translates to: LWAGNFISFDTETSAMIKFGGFC*AAAAGV Trigger: AACACCAGCAGCTGCTGCTCAGCAAAACCCACCAAA...TTTAATCATAGCAGATGTCTCTGTGTCAAAGGATATGAAGTTTCCTGCCCAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR CAA 72 bp | GAGGAGGCCAATACATGTTTTGGTGCTAACATTTGTTaGTTGTGTAGGGAGCACTTGACCTTCCTTGCTGGT | + |
Preference number: 4 (lower is better) Translates to: EEANTCFGANIC*LCREHLTFLAG Trigger: ACCAGCAAGGAAGGTCAAGTGCTCCCTACACAACAAACAAATGTTAGCACCAAAACATGTATTGGCCTCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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CDS-3UTR GCA 90 bp | GTCACACATTTTCATTGGTACAAACTGGTCTTTTTGGAAAGCAACTGTAGTATCGCTGCTGCATTGGCTTaGTGCTGGGCAAGTTTCTCC | + |
Preference number: 4 (lower is better) Translates to: VTHFHWYKLVFLESNCSIAAALA*CWASFS Trigger: GGAGAAACTTGCCCAGCAGCAAGCCAATGCAGCAGC...GATACTACAGTTGCTTTCCAAAAAGACCAGTTTGTACCAATGAAAATGTGTGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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CDS-3UTR GCA 90 bp | CACATTTTCATTGGTACAAACTGGTCTTTTTGGAAAGCAACTGTAGTATCCAAATGCAGCTGCTGCTGCTaGAGCTGCTGCATTGGCTTG | + |
Preference number: 4 (lower is better) Translates to: HIFIGTNWSFWKATVVSKCSCCC*SCCIGL Trigger: CAAGCCAATGCAGCAGCTGCAGCAGCAGCAGCTGCA...TTTGGATACTACAGTTGCTTTCCAAAAAGACCAGTTTGTACCAATGAAAATGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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CDS-3UTR CCA 90 bp | GTCACACATTTTCATTGGTACAAACTGGTCTTTTTGGAAAGCAACTGTAGTATCCTGCAGCTGCTGCATTaGCTTGCTGCTGGGCAAGTT | + |
Preference number: 4 (lower is better) Translates to: VTHFHWYKLVFLESNCSILQLLH*LAAGQV Trigger: AACTTGCCCAGCAGCAAGCCAATGCAGCAGCTGCAG...GATACTACAGTTGCTTTCCAAAAAGACCAGTTTGTACCAATGAAAATGTGTGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR CAA 72 bp | TTAGTCAGACAGAACAAAAAGTCAAGTCCTATGGTGTaGAGTGGGGTCAGAGAGTTGAACTTTGTAAGGTCC | + |
Preference number: 4 (lower is better) Translates to: LVRQNKKSSPMV*SGVRELNFVRS Trigger: GGACCTTACAAAGTTCAACTCTCTGACCCCACTCAACACCATAGGACTTGACTTTTTGTTCTGTCTGACTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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CDS-3UTR TCA 90 bp | CTCTGGGCAGGAAACTTCATATCCTTTGACACAGAGACATCTGCTATGATTAAAATCAAGGGCAGGTGCTaGATGAAAAGGAAACTGTTG | + |
Preference number: 4 (lower is better) Translates to: LWAGNFISFDTETSAMIKIKGRC*MKRKLL Trigger: CAACAGTTTCCTTTTCATTCAGCACCTGCCCTTGAT...TTTAATCATAGCAGATGTCTCTGTGTCAAAGGATATGAAGTTTCCTGCCCAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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CDS-3UTR CCA 90 bp | GAAAATGTTGAAAGAGGACCATGTCTGGCTGTACGTCTGACACAGACAATAAAATGTGGCTTTACTCGGTaGAATTTCAACGTCTCCATC | + |
Preference number: 4 (lower is better) Translates to: ENVERGPCLAVRLTQTIKCGFTR*NFNVSI Trigger: GATGGAGACGTTGAAATTCCACCGAGTAAAGCCACA...TTTTATTGTCTGTGTCAGACGTACAGCCAGACATGGTCCTCTTTCAACATTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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CDS-3UTR GCA 90 bp | GAAAATGTTGAAAGAGGACCATGTCTGGCTGTACGTCTGACACAGACAATAAAATGGTATATATCTCTTTaGTGTGAGCCTGGAGGTCAT | + |
Preference number: 4 (lower is better) Translates to: ENVERGPCLAVRLTQTIKWYISL*CEPGGH Trigger: ATGACCTCCAGGCTCACAGCAAAGAGATATATACCA...TTTTATTGTCTGTGTCAGACGTACAGCCAGACATGGTCCTCTTTCAACATTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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CDS-3UTR CCA 90 bp | CACATTTTCATTGGTACAAACTGGTCTTTTTGGAAAGCAACTGTAGTATCCAAAGTCCTTTCTGAAGAATaGAGATTAGGGCAGCCGGTG | + |
Preference number: 4 (lower is better) Translates to: HIFIGTNWSFWKATVVSKVLSEE*RLGQPV Trigger: CACCGGCTGCCCTAATCTCCATTCTTCAGAAAGGAC...TTTGGATACTACAGTTGCTTTCCAAAAAGACCAGTTTGTACCAATGAAAATGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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CDS-3UTR TCA 90 bp | GAAAATGTTGAAAGAGGACCATGTCTGGCTGTACGTCTGACACAGACAATAAAAGCTATTCCAGTCCAATaGAGTGACATCCTTATTACT | + |
Preference number: 4 (lower is better) Translates to: ENVERGPCLAVRLTQTIKAIPVQ*SDILIT Trigger: AGTAATAAGGATGTCACTTCATTGGACTGGAATAGC...TTTTATTGTCTGTGTCAGACGTACAGCCAGACATGGTCCTCTTTCAACATTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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CDS-3UTR CCA 90 bp | CACATTTTCATTGGTACAAACTGGTCTTTTTGGAAAGCAACTGTAGTATCCAAATTCTCCATTCTTTGGTaGGTTTTGCTGAGCAGCAGC | + |
Preference number: 4 (lower is better) Translates to: HIFIGTNWSFWKATVVSKFSILW*VLLSSS Trigger: GCTGCTGCTCAGCAAAACCCACCAAAGAATGGAGAA...TTTGGATACTACAGTTGCTTTCCAAAAAGACCAGTTTGTACCAATGAAAATGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR CAA 72 bp | GGAAGTGAATGGTCTTTAGGTTTCTTCTTGTGTAGATaGAACCTTTTTGTCCTAGTCTCACAGCCATTGACT | + |
Preference number: 4 (lower is better) Translates to: GSEWSLGFFLCR*NLFVLVSQPLT Trigger: AGTCAATGGCTGTGAGACTAGGACAAAAAGGTTCAATCTACACAAGAAGAAACCTAAAGACCATTCACTTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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CDS-3UTR GCA 90 bp | CACATTTTCATTGGTACAAACTGGTCTTTTTGGAAAGCAACTGTAGTATCCAAATATGTTGACCTAAGGTaGTGGCTAGGTTACCATCTT | + |
Preference number: 4 (lower is better) Translates to: HIFIGTNWSFWKATVVSKYVDLR*WLGYHL Trigger: AAGATGGTAACCTAGCCAGCACCTTAGGTCAACATA...TTTGGATACTACAGTTGCTTTCCAAAAAGACCAGTTTGTACCAATGAAAATGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR CAA 72 bp | TCATCTACCCATTACCACCATATAGCAATGTGGAACTaGTCAAATGAAAGTCATAACTTTACAATAGGCTGG | + |
Preference number: 4 (lower is better) Translates to: SSTHYHHIAMWN*SNESHNFTIGW Trigger: CCAGCCTATTGTAAAGTTATGACTTTCATTTGACAAGTTCCACATTGCTATATGGTGGTAATGGGTAGATGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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CDS-3UTR TCA 90 bp | CACATTTTCATTGGTACAAACTGGTCTTTTTGGAAAGCAACTGTAGTATCCAAATCCATTGGCTTTGAGTaGTTATTTATTGCATGGGCT | + |
Preference number: 4 (lower is better) Translates to: HIFIGTNWSFWKATVVSKSIGFE*LFIAWA Trigger: AGCCCATGCAATAAATAATCACTCAAAGCCAATGGA...TTTGGATACTACAGTTGCTTTCCAAAAAGACCAGTTTGTACCAATGAAAATGTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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3UTR CAA 72 bp | AAAGTCACACATTTTCATTGGTACAAACTGGTCTTTTaGGAAAGCAACTGTAGTATCCAAATTGATAGGAGG | + |
Preference number: 4 (lower is better) Translates to: KVTHFHWYKLVF*ESNCSIQIDRR Trigger: CCTCCTATCAATTTGGATACTACAGTTGCTTTCCAAAAAGACCAGTTTGTACCAATGAAAATGTGTGACTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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CDS GCA 90 bp | CACGGTGGCTTCTCCATTCTTTGGTGGGTTTTGCTGAGCAGCAGCTaGTGGTGTTGTAGCCGCTGTGCTTGTGGCTGTGGCTGCAGCTGC | + |
Preference number: 5 (lower is better) Translates to: HGGFSILWWVLLSSS*WCCSRCACGCGCSC Trigger: GCAGCTGCAGCCACAGCCACAAGCACAGCGGCTACAACACCAGCAGCTGCTGCTCAGCAAAACCCACCAAAGAATGGAGAAGCCACCGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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CDS-3UTR CAA 90 bp | TCATTACAAGTGAGACCACACCAGAGCAAGGACATCAGAGGAAGGGGCGGGCAAGCGCTGGCACCCACTTaGTCTCCTCGAGCATTCCAG | + |
Preference number: 5 (lower is better) Translates to: SLQVRPHQSKDIRGRGGQALAPT*SPRAFQ Trigger: CTGGAATGCTCGAGGAGACAAAGTGGGTGCCAGCGC...TTGCCCGCCCCTTCCTCTGATGTCCTTGCTCTGGTGTGGTCTCACTTGTAATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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CDS-3UTR CAA 90 bp | CTGCAGGCTGAACCCTGCACACTGTCTCTTGCAACCCCCTTCTGGTCTGTCCCCCAAATTATTGTTGTCTaGTCTACACCAGCACTCAAA | + |
Preference number: 5 (lower is better) Translates to: LQAEPCTLSLATPFWSVPQIIVV*STPALK Trigger: TTTGAGTGCTGGTGTAGACAAGACAACAATAATTTG...GGGGACAGACCAGAAGGGGGTTGCAAGAGACAGTGTGCAGGGTTCAGCCTGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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CDS-3UTR CAA 90 bp | TTAGTCAGACAGAACAAAAAGTCAAGTCCTATGGTGTTGAGTGGGGTCAGAGAGATGTTGGAGTTCGGGTaGCTGGTGGCTGGTCCTGTG | + |
Preference number: 5 (lower is better) Translates to: LVRQNKKSSPMVLSGVREMLEFG*LVAGPV Trigger: CACAGGACCAGCCACCAGCAACCCGAACTCCAACAT...CTCTCTGACCCCACTCAACACCATAGGACTTGACTTTTTGTTCTGTCTGACTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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CDS-3UTR CAA 90 bp | TTAGTCAGACAGAACAAAAAGTCAAGTCCTATGGTGTTGAGTGGGGTCAGAGAGTGGCTTCTCCATTCTTaGGTGGGTTTTGCTGAGCAG | + |
Preference number: 5 (lower is better) Translates to: LVRQNKKSSPMVLSGVREWLLHS*VGFAEQ Trigger: CTGCTCAGCAAAACCCACCAAAGAATGGAGAAGCCA...CTCTCTGACCCCACTCAACACCATAGGACTTGACTTTTTGTTCTGTCTGACTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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CDS-3UTR CAA 90 bp | CCAACCATGCACCATGTAGCTGATGGCTTCATCCTTCCCCAGCTGAGCATTCTATCCCATTTGATAGCATaGACCTCATTAGTATGTCCT | + |
Preference number: 5 (lower is better) Translates to: PTMHHVADGFILPQLSILSHLIA*TSLVCP Trigger: AGGACATACTAATGAGGTCAATGCTATCAAATGGGA...TAGAATGCTCAGCTGGGGAAGGATGAAGCCATCAGCTACATGGTGCATGGTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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CDS-3UTR CAA 90 bp | TTAGTCAGACAGAACAAAAAGTCAAGTCCTATGGTGTTGAGTGGGGTCAGAGAGCAGATATGGACACACTaGTCAAAAGATCCACTGGCC | + |
Preference number: 5 (lower is better) Translates to: LVRQNKKSSPMVLSGVREQIWTH*SKDPLA Trigger: GGCCAGTGGATCTTTTGACAAGTGTGTCCATATCTG...CTCTCTGACCCCACTCAACACCATAGGACTTGACTTTTTGTTCTGTCTGACTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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CDS TCA 90 bp | AACCTGTTGCCAACAGTGTTCCATCGCTATTCCAGTCCAATGAAGTaGCATCCTTATTACTGGGAACATCATGTCCACCTTCACGTATAC | + |
Preference number: 5 (lower is better) Translates to: NLLPTVFHRYSSPMK*HPYYWEHHVHLHVY Trigger: GTATACGTGAAGGTGGACATGATGTTCCCAGTAATAAGGATGTCACTTCATTGGACTGGAATAGCGATGGAACACTGTTGGCAACAGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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CDS-3UTR CAA 90 bp | CTCTGGGCAGGAAACTTCATATCCTTTGACACAGAGACATCTGCTATGATTAAATTTCTCCCGAAAAGCTaGCTGTCTTGTCTGTACCAC | + |
Preference number: 5 (lower is better) Translates to: LWAGNFISFDTETSAMIKFLPKS*LSCLYH Trigger: GTGGTACAGACAAGACAGCAAGCTTTTCGGGAGAAA...TTTAATCATAGCAGATGTCTCTGTGTCAAAGGATATGAAGTTTCCTGCCCAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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CDS-3UTR CAA 90 bp | GTCACACATTTTCATTGGTACAAACTGGTCTTTTTGGAAAGCAACTGTAGTATCGAAAAGCTTGCTGTCTaGTCTGTACCACATCGGGCA | + |
Preference number: 5 (lower is better) Translates to: VTHFHWYKLVFLESNCSIEKLAV*SVPHRA Trigger: TGCCCGATGTGGTACAGACAAGACAGCAAGCTTTTC...GATACTACAGTTGCTTTCCAAAAAGACCAGTTTGTACCAATGAAAATGTGTGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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CDS-3UTR CAA 90 bp | GAAAATGTTGAAAGAGGACCATGTCTGGCTGTACGTCTGACACAGACAATAAAAGAGCGTCCCAAATTATaGTTGTCTTGTCTACACCAG | + |
Preference number: 5 (lower is better) Translates to: ENVERGPCLAVRLTQTIKERPKL*LSCLHQ Trigger: CTGGTGTAGACAAGACAACAATAATTTGGGACGCTC...TTTTATTGTCTGTGTCAGACGTACAGCCAGACATGGTCCTCTTTCAACATTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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CDS-3UTR CAA 90 bp | GTCACACATTTTCATTGGTACAAACTGGTCTTTTTGGAAAGCAACTGTAGTATCCTCATTAGTATGTCCTaGGAAGGTTTTGACTGGGCG | + |
Preference number: 5 (lower is better) Translates to: VTHFHWYKLVFLESNCSILISMS*EGFDWA Trigger: CGCCCAGTCAAAACCTTCCAAGGACATACTAATGAG...GATACTACAGTTGCTTTCCAAAAAGACCAGTTTGTACCAATGAAAATGTGTGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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CDS CCA 72 bp | GCTGCTGCTGCTGCAGCTGCTGCATTGGCTTGCTGCTaGGCAAGTTTCTCCCGAAAAGCTTGCTGTCTTGTC | + |
Preference number: 6 (lower is better) Translates to: AAAAAAAALACC*ASFSRKACCLV Trigger: GACAAGACAGCAAGCTTTTCGGGAGAAACTTGCCCAGCAGCAAGCCAATGCAGCAGCTGCAGCAGCAGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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CDS CCA 72 bp | TCCATTCTTTGGTGGGTTTTGCTGAGCAGCAGCTGCTaGTGTTGTAGCCGCTGTGCTTGTGGCTGTGGCTGC | + |
Preference number: 6 (lower is better) Translates to: SILWWVLLSSSC*CCSRCACGCGC Trigger: GCAGCCACAGCCACAAGCACAGCGGCTACAACACCAGCAGCTGCTGCTCAGCAAAACCCACCAAAGAATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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CDS CAA 72 bp | GCTGCTGGGCAAGTTTCTCCCGAAAAGCTTGCTGTCTaGTCTGTACCACATCGGGCATCACAGCATCAATTA | + |
Preference number: 6 (lower is better) Translates to: AAGQVSPEKLAV*SVPHRASQHQL Trigger: TAATTGATGCTGTGATGCCCGATGTGGTACAGACAAGACAGCAAGCTTTTCGGGAGAAACTTGCCCAGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |
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CDS TCA 72 bp | CCAACAGTGTTCCATCGCTATTCCAGTCCAATGAAGTaGCATCCTTATTACTGGGAACATCATGTCCACCTT | + |
Preference number: 6 (lower is better) Translates to: PTVFHRYSSPMK*HPYYWEHHVHL Trigger: AAGGTGGACATGATGTTCCCAGTAATAAGGATGTCACTTCATTGGACTGGAATAGCGATGGAACACTGTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088217.12 |