Pregenerated sensors for TBKBP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038517Ensembl transcript IDs: ENSMUST00000066078.12, ENSMUST00000107613.8, ENSMUST00000107614.8, ENSMUST00000107615.8, ENSMUST00000118375.8, ENSMUST00000146374.3
Found 358 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTCCGCCAGCTCCGAGTAGCTGCGGCGGCCCTGGAAGCCGGCCTTaGCGTGGTGGCTGGGCGGCTTGGCGTAGACACGCTCGGCCAGCG | + |
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Preference number: 1 (lower is better) Translates to: PPPAPSSCGGPGSRP*RGGWAAWRRHARPA Trigger: CGCTGGCCGAGCGTGTCTACGCCAAGCCGCCCAGCCACCACGCCAAGGCCGGCTTCCAGGGCCGCCGCAGCTACTCGGAGCTGGCGGAGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
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| 3UTR TCA 90 bp | GCTTCTCAAAGCGCAGGCGGATGCCCTCAAAGGCTCGGCGCGGGCTaGGCGGCCTGCCGTAGAGCTCGCCGCCATAGGCGCGGGGCTTGG | + |
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Preference number: 1 (lower is better) Translates to: ASQSAGGCPQRLGAG*AACRRARRHRRGAW Trigger: CCAAGCCCCGCGCCTATGGCGGCGAGCTCTACGGCAGGCCGCTCAGCCCGCGCCGAGCCTTTGAGGGCATCCGCCTGCGCTTTGAGAAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
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| 3UTR CCA 90 bp | CTGCCATCGGCTGGCCGAGGCCCCAGGGAGGCTCAAAGCGAGGGGTaGATTCATAGTGGGCAGCAGACTCCCTCGGGAGGCTCCCACCTC | + |
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Preference number: 1 (lower is better) Translates to: LPSAGRGPREAQSEG*IHSGQQTPSGGSHL Trigger: GAGGTGGGAGCCTCCCGAGGGAGTCTGCTGCCCACTATGAATCCACCCCTCGCTTTGAGCCTCCCTGGGGCCTCGGCCAGCCGATGGCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| 3UTR GCA 90 bp | CTGGGCGGGCTGGCCGGCATAGCCCACTCCTCTTCTTCAGATGGCTaGTTCTCAAAGCGCAGGCGGATGCCCTCAAAGGCTCGGCGCGGG | + |
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Preference number: 1 (lower is better) Translates to: LGGLAGIAHSSSSDG*FSKRRRMPSKARRG Trigger: CCCGCGCCGAGCCTTTGAGGGCATCCGCCTGCGCTTTGAGAAGCAGCCATCTGAAGAAGAGGAGTGGGCTATGCCGGCCAGCCCGCCCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
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| 3UTR CCA 90 bp | GGGACTGGGCGGGCTGGCCGGCATAGCCCACTCCTCTTCTTCAGATaGCTGCTTCTCAAAGCGCAGGCGGATGCCCTCAAAGGCTCGGCG | + |
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Preference number: 1 (lower is better) Translates to: GTGRAGRHSPLLFFR*LLLKAQADALKGSA Trigger: CGCCGAGCCTTTGAGGGCATCCGCCTGCGCTTTGAGAAGCAGCCATCTGAAGAAGAGGAGTGGGCTATGCCGGCCAGCCCGCCCAGTCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
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| 3UTR GCA 90 bp | CTTTGGGCTGGATCATCCAAGGCCTGCAGGGTCCTCCCACCCCTCTaGCACCTGGTTTCCCAGGGTGAGCAGAGGGGGAGAACAGAGCTG | + |
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Preference number: 1 (lower is better) Translates to: LWAGSSKACRVLPPL*HLVSQGEQRGRTEL Trigger: CAGCTCTGTTCTCCCCCTCTGCTCACCCTGGGAAACCAGGTGGCAGAGGGGTGGGAGGACCCTGCAGGCCTTGGATGATCCAGCCCAAAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| 3UTR TCA 90 bp | GGAGGCATCTGCCTTGGTGATCTGCACCTTAGTGCCAGGGGCTCCTaGAGAGCCCAGGCCTGTGAGGCTGGCAGACAGTTCCCTGGATTG | + |
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Preference number: 1 (lower is better) Translates to: GGICLGDLHLSARGS*RAQACEAGRQFPGL Trigger: CAATCCAGGGAACTGTCTGCCAGCCTCACAGGCCTGGGCTCTTCAGGAGCCCCTGGCACTAAGGTGCAGATCACCAAGGCAGATGCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| 3UTR GCA 90 bp | CCTCTCCAGCTCGCTCACACTTACACTCGTAGGGCCAGGCCAACCTaGATGACCCAAGGCAGGTCCCCCTCTCAGAGCCAGATAGTGCAG | + |
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Preference number: 1 (lower is better) Translates to: PLQLAHTYTRRARPT*MTQGRSPSQSQIVQ Trigger: CTGCACTATCTGGCTCTGAGAGGGGGACCTGCCTTGGGTCATGCAGGTTGGCCTGGCCCTACGAGTGTAAGTGTGAGCGAGCTGGAGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
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| 3UTR CCA 90 bp | GGGGGCCTGGAAGATTTGGATCAGAATGGCACATTCGATGGACAGTaGCGTTCACTGCCATCGGCTGGCCGAGGCCCCAGGGAGGCTCAA | + |
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Preference number: 1 (lower is better) Translates to: GGLEDLDQNGTFDGQ*RSLPSAGRGPREAQ Trigger: TTGAGCCTCCCTGGGGCCTCGGCCAGCCGATGGCAGTGAACGCCACTGTCCATCGAATGTGCCATTCTGATCCAAATCTTCCAGGCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| 3UTR CCA 90 bp | GAGCCTTGGTCGACCTCCAGGAAAGAGCCAGAGCTGAGTGGTGCCTaGACCAGGGAAGACGGCACACACATTGACTCGGTAGCTAGTGGA | + |
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Preference number: 1 (lower is better) Translates to: EPWSTSRKEPELSGA*TREDGTHIDSVASG Trigger: TCCACTAGCTACCGAGTCAATGTGTGTGCCGTCTTCCCTGGTCCAGGCACCACTCAGCTCTGGCTCTTTCCTGGAGGTCGACCAAGGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| 3UTR TCA 90 bp | GCATCTCAATTACCCAGGCTGAGGGAAGCAGTACACTACTCACGTTaGTGGATGGCCAGGACTGTGCGTGCTCAGCGTGGGCATAGGCGG | + |
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Preference number: 1 (lower is better) Translates to: ASQLPRLREAVHYSR*WMARTVRAQRGHRR Trigger: CCGCCTATGCCCACGCTGAGCACGCACAGTCCTGGCCATCCATCAACGTGAGTAGTGTACTGCTTCCCTCAGCCTGGGTAATTGAGATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
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| 3UTR CCA 90 bp | ACAAGAAATAAGATGCCTCCTTCCCCAGTACCACGAGCCCCAAGCTaGTCGGTCATGAGACAGAAGGGCTGGCATCAGTGTGCAGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: TRNKMPPSPVPRAPS*SVMRQKGWHQCAGQ Trigger: CTGCCCTGCACACTGATGCCAGCCCTTCTGTCTCATGACCGACCAGCTTGGGGCTCGTGGTACTGGGGAAGGAGGCATCTTATTTCTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| 3UTR CCA 90 bp | CCTCTTGGAGACAACCCTGTTGAAGAACAGAAAGGCAGAGAGAGGTaGAGGGTATATCCTCCTCATCCCAGACCAGATCCCCGCTCCCCA | + |
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Preference number: 1 (lower is better) Translates to: PLGDNPVEEQKGRER*RVYPPHPRPDPRSP Trigger: TGGGGAGCGGGGATCTGGTCTGGGATGAGGAGGATATACCCTCCACCTCTCTCTGCCTTTCTGTTCTTCAACAGGGTTGTCTCCAAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| 3UTR-3UTR TCA 90 bp | GCACAGAATGAAGCGCAGCGGATGGTGCCCGCTTCGGGACTGGGCGGGCTGGCCGCAGGGGCCGGGGAGTaGCGTTGCGACAGCGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: AQNEAQRMVPASGLGGLAAGAGE*RCDSGE Trigger: CTCACCGCTGTCGCAACGTCACTCCCCGGCCCCTGC...GGCCAGCCCGCCCAGTCCCGAAGCGGGCACCATCCGCTGCGCTTCATTCTGTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
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| 3UTR-3UTR TCA 90 bp | GACAGTGGCGTTCACTGCCATCGGCTGGCCGAGGCCCCAGGGAGGCTCAAAGCGAGTGCCAGGGGCTCCTaGAGAGCCCAGGCCTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: DSGVHCHRLAEAPGRLKASARGS*RAQACE Trigger: CTCACAGGCCTGGGCTCTTCAGGAGCCCCTGGCACT...CGCTTTGAGCCTCCCTGGGGCCTCGGCCAGCCGATGGCAGTGAACGCCACTGTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| 3UTR-3UTR GCA 90 bp | CGTGGTGGCTGGGCGGCTTGGCGTAGACACGCTCGGCCAGCGTCCTCTCCCCCGCGGAGGCCCTGCTGTTaGTGCAGCTGTTTCTCCAGA | + |
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Preference number: 2 (lower is better) Translates to: RGGWAAWRRHARPASSPPRRPCC*CSCFSR Trigger: TCTGGAGAAACAGCTGCAGCAACAGCAGGGCCTCCG...CGGGGGAGAGGACGCTGGCCGAGCGTGTCTACGCCAAGCCGCCCAGCCACCACG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
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| 3UTR-3UTR GCA 90 bp | GCACAGAATGAAGCGCAGCGGATGGTGCCCGCTTCGGGACTGGGCGGGCTGGCCTGGGCCCGGGTCTCCTaGAGTTGCTTCAGCTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: AQNEAQRMVPASGLGGLAWARVS*SCFSSP Trigger: GGGAGAGCTGAAGCAACTGCAGGAGACCCGGGCCCA...GGCCAGCCCGCCCAGTCCCGAAGCGGGCACCATCCGCTGCGCTTCATTCTGTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGGGCCGGGGAGTGACGTTGCGACAGCGGTGAGTGCCTTTGGCCTGCGTTGCTTGGAGGCCAGATCCTaGGCCCGGGTCTCCTGCAGT | + |
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Preference number: 2 (lower is better) Translates to: QGPGSDVATAVSAFGLRCLEARS*ARVSCS Trigger: ACTGCAGGAGACCCGGGCCCAGGATCTGGCCTCCAA...GCAACGCAGGCCAAAGGCACTCACCGCTGTCGCAACGTCACTCCCCGGCCCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
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| 3UTR-3UTR GCA 90 bp | GATGGACAGTGGCGTTCACTGCCATCGGCTGGCCGAGGCCCCAGGGAGGCTCAAGCCAGAGCTGAGTGGTaGCTGGACCAGGGAAGACGG | + |
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Preference number: 2 (lower is better) Translates to: DGQWRSLPSAGRGPREAQARAEW*LDQGRR Trigger: CCGTCTTCCCTGGTCCAGGCACCACTCAGCTCTGGC...TTGAGCCTCCCTGGGGCCTCGGCCAGCCGATGGCAGTGAACGCCACTGTCCATC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| 3UTR-3UTR CCA 90 bp | GACAGTGGCGTTCACTGCCATCGGCTGGCCGAGGCCCCAGGGAGGCTCAAAGCGGAGCTGAGTGGTGCCTaGACCAGGGAAGACGGCACA | + |
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Preference number: 2 (lower is better) Translates to: DSGVHCHRLAEAPGRLKAELSGA*TREDGT Trigger: TGTGCCGTCTTCCCTGGTCCAGGCACCACTCAGCTC...CGCTTTGAGCCTCCCTGGGGCCTCGGCCAGCCGATGGCAGTGAACGCCACTGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| 3UTR-3UTR CCA 90 bp | GACAGTGGCGTTCACTGCCATCGGCTGGCCGAGGCCCCAGGGAGGCTCAAAGCGGCTCTGGGGAACCTGTaGTGTCAGGAGCTGCAGTGG | + |
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Preference number: 2 (lower is better) Translates to: DSGVHCHRLAEAPGRLKAALGNL*CQELQW Trigger: CCACTGCAGCTCCTGACACCACAGGTTCCCCAGAGC...CGCTTTGAGCCTCCCTGGGGCCTCGGCCAGCCGATGGCAGTGAACGCCACTGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| 3UTR-3UTR TCA 90 bp | GACAGTGGCGTTCACTGCCATCGGCTGGCCGAGGCCCCAGGGAGGCTCAAAGCGCAAGCTGGTCGGTCATaGGACAGAAGGGCTGGCATC | + |
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Preference number: 2 (lower is better) Translates to: DSGVHCHRLAEAPGRLKAQAGRS*DRRAGI Trigger: GATGCCAGCCCTTCTGTCTCATGACCGACCAGCTTG...CGCTTTGAGCCTCCCTGGGGCCTCGGCCAGCCGATGGCAGTGAACGCCACTGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGGGCCGGGGAGTGACGTTGCGACAGCGGTGAGTGCCTTTGGCCTGCGTTGCCAGATCTGCCGTAGATaGGTCTCTACCAGGGCCCGA | + |
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Preference number: 2 (lower is better) Translates to: QGPGSDVATAVSAFGLRCQICRR*VSTRAR Trigger: TCGGGCCCTGGTAGAGACTCATCTACGGCAGATCTG...GCAACGCAGGCCAAAGGCACTCACCGCTGTCGCAACGTCACTCCCCGGCCCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
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| 3UTR-3UTR CCA 90 bp | GACAGTGGCGTTCACTGCCATCGGCTGGCCGAGGCCCCAGGGAGGCTCAAAGCGAGAGCCAGAGCTGAGTaGTGCCTGGACCAGGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: DSGVHCHRLAEAPGRLKARARAE*CLDQGR Trigger: TCTTCCCTGGTCCAGGCACCACTCAGCTCTGGCTCT...CGCTTTGAGCCTCCCTGGGGCCTCGGCCAGCCGATGGCAGTGAACGCCACTGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| 3UTR-3UTR CCA 90 bp | GGCGTTCACTGCCATCGGCTGGCCGAGGCCCCAGGGAGGCTCAAAGCGAGGGGTAGATGGGGAGAGCCTTaGTCGACCTCCAGGAAAGAG | + |
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Preference number: 2 (lower is better) Translates to: GVHCHRLAEAPGRLKARGRWGEP*STSRKE Trigger: CTCTTTCCTGGAGGTCGACCAAGGCTCTCCCCATCT...ACCCCTCGCTTTGAGCCTCCCTGGGGCCTCGGCCAGCCGATGGCAGTGAACGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| 3UTR-3UTR CCA 90 bp | GGCGTTCACTGCCATCGGCTGGCCGAGGCCCCAGGGAGGCTCAAAGCGAGGGGTTGGAAACCAGGAAGATaGGGAGAGCCTTGGTCGACC | + |
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Preference number: 2 (lower is better) Translates to: GVHCHRLAEAPGRLKARGWKPGR*GEPWST Trigger: GGTCGACCAAGGCTCTCCCCATCTTCCTGGTTTCCA...ACCCCTCGCTTTGAGCCTCCCTGGGGCCTCGGCCAGCCGATGGCAGTGAACGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| 3UTR-3UTR TCA 90 bp | AGCCTCAAGGCAGCCCCTTTGGGCTGGATCATCCAAGGCCTGCAGGGTCCTCCCCCTGGTTTCCCAGGGTaGGCAGAGGGGGAGAACAGA | + |
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Preference number: 2 (lower is better) Translates to: SLKAAPLGWIIQGLQGPPPGFPG*AEGENR Trigger: TCTGTTCTCCCCCTCTGCTCACCCTGGGAAACCAGG...GGGAGGACCCTGCAGGCCTTGGATGATCCAGCCCAAAGGGGCTGCCTTGAGGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGGGCCGGGGAGTGACGTTGCGACAGCGGTGAGTGCCTTTGGCCTGCGTTGCAGGCCCTGCTGTTGCTaGAGCTGTTTCTCCAGACCA | + |
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Preference number: 2 (lower is better) Translates to: QGPGSDVATAVSAFGLRCRPCCC*SCFSRP Trigger: TGGTCTGGAGAAACAGCTGCAGCAACAGCAGGGCCT...GCAACGCAGGCCAAAGGCACTCACCGCTGTCGCAACGTCACTCCCCGGCCCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
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| 3UTR-3UTR GCA 90 bp | GCACAGAATGAAGCGCAGCGGATGGTGCCCGCTTCGGGACTGGGCGGGCTGGCCTCTTCTTCAGATGGCTaGTTCTCAAAGCGCAGGCGG | + |
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Preference number: 2 (lower is better) Translates to: AQNEAQRMVPASGLGGLASSSDG*FSKRRR Trigger: CCGCCTGCGCTTTGAGAAGCAGCCATCTGAAGAAGA...GGCCAGCCCGCCCAGTCCCGAAGCGGGCACCATCCGCTGCGCTTCATTCTGTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
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| 3UTR-3UTR CCA 90 bp | GGCGTTCACTGCCATCGGCTGGCCGAGGCCCCAGGGAGGCTCAAAGCGAGGGGTGGAAAGACAGACATTTaGGAAGGGGCTCCCAGAGCT | + |
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Preference number: 2 (lower is better) Translates to: GVHCHRLAEAPGRLKARGGKTDI*EGAPRA Trigger: AGCTCTGGGAGCCCCTTCCCAAATGTCTGTCTTTCC...ACCCCTCGCTTTGAGCCTCCCTGGGGCCTCGGCCAGCCGATGGCAGTGAACGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| 3UTR-3UTR CCA 90 bp | GATGGACAGTGGCGTTCACTGCCATCGGCTGGCCGAGGCCCCAGGGAGGCTCAATCTCAGGTTCTGGCCTaGAAGGCAGGGGCTGATGAC | + |
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Preference number: 2 (lower is better) Translates to: DGQWRSLPSAGRGPREAQSQVLA*KAGADD Trigger: GTCATCAGCCCCTGCCTTCCAGGCCAGAACCTGAGA...TTGAGCCTCCCTGGGGCCTCGGCCAGCCGATGGCAGTGAACGCCACTGTCCATC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| 3UTR-3UTR TCA 90 bp | AGCCTCAAGGCAGCCCCTTTGGGCTGGATCATCCAAGGCCTGCAGGGTCCTCCCCAAGCTGGTCGGTCATaGGACAGAAGGGCTGGCATC | + |
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Preference number: 2 (lower is better) Translates to: SLKAAPLGWIIQGLQGPPQAGRS*DRRAGI Trigger: GATGCCAGCCCTTCTGTCTCATGACCGACCAGCTTG...GGGAGGACCCTGCAGGCCTTGGATGATCCAGCCCAAAGGGGCTGCCTTGAGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| 3UTR-3UTR TCA 90 bp | CTCCTCTGTCAGTTCTGTGTAGGCCAGCGCCAAGTTCACCCTCGGGTCCAGTCTCCAGGCCAACCTGCATaGCCCAAGGCAGGTCCCCCT | + |
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Preference number: 2 (lower is better) Translates to: LLCQFCVGQRQVHPRVQSPGQPA*PKAGPP Trigger: AGGGGGACCTGCCTTGGGTCATGCAGGTTGGCCTGG...AGACTGGACCCGAGGGTGAACTTGGCGCTGGCCTACACAGAACTGACAGAGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
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| 3UTR-3UTR TCA 90 bp | CCATGTCCCCTCCCTGGGGAACACTCAGGGTACAATGACATGTCTCTGGAGTCCAGTGCCAGGGGCTCCTaGAGAGCCCAGGCCTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: PCPLPGEHSGYNDMSLESSARGS*RAQACE Trigger: CTCACAGGCCTGGGCTCTTCAGGAGCCCCTGGCACT...GGACTCCAGAGACATGTCATTGTACCCTGAGTGTTCCCCAGGGAGGGGACATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| 3UTR-3UTR TCA 90 bp | GGGAGGGGGCCTGGAAGATTTGGATCAGAATGGCACATTCGATGGACAGTGGCGAGTGCCAGGGGCTCCTaGAGAGCCCAGGCCTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: GRGPGRFGSEWHIRWTVASARGS*RAQACE Trigger: CTCACAGGCCTGGGCTCTTCAGGAGCCCCTGGCACT...CGCCACTGTCCATCGAATGTGCCATTCTGATCCAAATCTTCCAGGCCCCCTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGACTCTCTGCTCTGCATCTCAATTACCCAGGCTGAGGGAAGCAGTACACTAAGGCTCGGCGCGGGCTaGGCGGCCTGCCGTAGAGCT | + |
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Preference number: 2 (lower is better) Translates to: ADSLLCISITQAEGSSTLRLGAG*AACRRA Trigger: AGCTCTACGGCAGGCCGCTCAGCCCGCGCCGAGCCT...TAGTGTACTGCTTCCCTCAGCCTGGGTAATTGAGATGCAGAGCAGAGAGTCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
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| 3UTR-3UTR GCA 90 bp | GGGCTGATGACACCTACCCAGCAAACACAGGCTGAGTCACACTTGGGCTCTGGGGCCAGAGCTGAGTGGTaGCTGGACCAGGGAAGACGG | + |
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Preference number: 2 (lower is better) Translates to: GLMTPTQQTQAESHLGSGARAEW*LDQGRR Trigger: CCGTCTTCCCTGGTCCAGGCACCACTCAGCTCTGGC...CCCAGAGCCCAAGTGTGACTCAGCCTGTGTTTGCTGGGTAGGTGTCATCAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| 3UTR-3UTR CCA 90 bp | CATCGGCTGGCCGAGGCCCCAGGGAGGCTCAAAGCGAGGGGTGGATTCATAGTGTGGAAACCAGGAAGATaGGGAGAGCCTTGGTCGACC | + |
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Preference number: 2 (lower is better) Translates to: HRLAEAPGRLKARGGFIVWKPGR*GEPWST Trigger: GGTCGACCAAGGCTCTCCCCATCTTCCTGGTTTCCA...CACTATGAATCCACCCCTCGCTTTGAGCCTCCCTGGGGCCTCGGCCAGCCGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| 3UTR-3UTR TCA 90 bp | GGCTGGCAGACAGTTCCCTGGATTGAGGGTAATGGCCCAGGAGTCCCAGCCTCACTCCTCTCCCTCCCCTaGGCACTAGACTTCCTCTTG | + |
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Preference number: 2 (lower is better) Translates to: GWQTVPWIEGNGPGVPASLLSLP*ALDFLL Trigger: CAAGAGGAAGTCTAGTGCTCAGGGGAGGGAGAGGAG...TGAGGCTGGGACTCCTGGGCCATTACCCTCAATCCAGGGAACTGTCTGCCAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| 3UTR-3UTR TCA 90 bp | GGCGTTCACTGCCATCGGCTGGCCGAGGCCCCAGGGAGGCTCAAAGCGAGGGGTAGAGCTGGCCTGCAGTaGCTAACAAGAAATAAGATG | + |
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Preference number: 2 (lower is better) Translates to: GVHCHRLAEAPGRLKARGRAGLQ*LTRNKM Trigger: CATCTTATTTCTTGTTAGTCACTGCAGGCCAGCTCT...ACCCCTCGCTTTGAGCCTCCCTGGGGCCTCGGCCAGCCGATGGCAGTGAACGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| 3UTR-3UTR TCA 90 bp | CTACTGTGTGTGAAGATAAGCAATGAGGTGCGACCCCAGAGAGAGGGCAGACTCCAAGTCAGGACAGGCTaGGGCGGGGACAGCTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: LLCVKISNEVRPQREGRLQVRTG*GGDSWG Trigger: CCCCCAGCTGTCCCCGCCTCAGCCTGTCCTGACTTG...GAGTCTGCCCTCTCTCTGGGGTCGCACCTCATTGCTTATCTTCACACACAGTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGACTCTCTGCTCTGCATCTCAATTACCCAGGCTGAGGGAAGCAGTACACTAACAGGCGAGCGGCGCTaGGGACTGGGCGACTGGCAC | + |
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Preference number: 2 (lower is better) Translates to: ADSLLCISITQAEGSSTLTGERR*GLGDWH Trigger: GTGCCAGTCGCCCAGTCCTCAGCGCCGCTCGCCTGT...TAGTGTACTGCTTCCCTCAGCCTGGGTAATTGAGATGCAGAGCAGAGAGTCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
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| 3UTR-3UTR GCA 90 bp | CCATGTCCCCTCCCTGGGGAACACTCAGGGTACAATGACATGTCTCTGGAGTCCGGATCATCCAAGGCCTaGAGGGTCCTCCCACCCCTC | + |
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Preference number: 2 (lower is better) Translates to: PCPLPGEHSGYNDMSLESGSSKA*RVLPPL Trigger: GAGGGGTGGGAGGACCCTGCAGGCCTTGGATGATCC...GGACTCCAGAGACATGTCATTGTACCCTGAGTGTTCCCCAGGGAGGGGACATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTACTCACGTTGATGGATGGCCAGGACTGTGCGTGCTCAGCGTGGGCATAGGCCACATTCCGACTGGTTaGAGGCCAGATCCTGGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: TTHVDGWPGLCVLSVGIGHIPTG*RPDPGP Trigger: GGGCCCAGGATCTGGCCTCCAACCAGTCGGAATGTG...GCCTATGCCCACGCTGAGCACGCACAGTCCTGGCCATCCATCAACGTGAGTAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGAAAGGCAGAGAGAGGTGGAGGGTATATCCTCCTCATCCCAGACCAGATCCCGGAAAGAGCCAGAGCTaGGTGGTGCCTGGACCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: QKGRERWRVYPPHPRPDPGKSQS*VVPGPG Trigger: CCCTGGTCCAGGCACCACTCAGCTCTGGCTCTTTCC...GGGATCTGGTCTGGGATGAGGAGGATATACCCTCCACCTCTCTCTGCCTTTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| 3UTR-3UTR TCA 90 bp | GGGAGGGGGCCTGGAAGATTTGGATCAGAATGGCACATTCGATGGACAGTGGCGCCTGGTTTCCCAGGGTaGGCAGAGGGGGAGAACAGA | + |
|
Preference number: 2 (lower is better) Translates to: GRGPGRFGSEWHIRWTVAPGFPG*AEGENR Trigger: TCTGTTCTCCCCCTCTGCTCACCCTGGGAAACCAGG...CGCCACTGTCCATCGAATGTGCCATTCTGATCCAAATCTTCCAGGCCCCCTCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| 3UTR-3UTR CCA 90 bp | CAGAAAGGCAGAGAGAGGTGGAGGGTATATCCTCCTCATCCCAGACCAGATCCCGCTAGTGGAGGTATCTaGGGACCGCAAGGGGCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: QKGRERWRVYPPHPRPDPASGGI*GPQGAG Trigger: CCCTGCCCCTTGCGGTCCCCAGATACCTCCACTAGC...GGGATCTGGTCTGGGATGAGGAGGATATACCCTCCACCTCTCTCTGCCTTTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGCTGATGACACCTACCCAGCAAACACAGGCTGAGTCACACTTGGGCTCTGGGAGAGCCAGAGCTGAGTaGTGCCTGGACCAGGGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: GLMTPTQQTQAESHLGSGRARAE*CLDQGR Trigger: TCTTCCCTGGTCCAGGCACCACTCAGCTCTGGCTCT...CCCAGAGCCCAAGTGTGACTCAGCCTGTGTTTGCTGGGTAGGTGTCATCAGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCAGAGAGAGGTGGAGGGTATATCCTCCTCATCCCAGACCAGATCCCCGCTCCAGATGGGGAGAGCCTTaGTCGACCTCCAGGAAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: GRERWRVYPPHPRPDPRSRWGEP*STSRKE Trigger: CTCTTTCCTGGAGGTCGACCAAGGCTCTCCCCATCT...GGAGCGGGGATCTGGTCTGGGATGAGGAGGATATACCCTCCACCTCTCTCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGAGGGGGCCTGGAAGATTTGGATCAGAATGGCACATTCGATGGACAGTGGCGGCTCTGGGGAACCTGTaGTGTCAGGAGCTGCAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: GRGPGRFGSEWHIRWTVAALGNL*CQELQW Trigger: CCACTGCAGCTCCTGACACCACAGGTTCCCCAGAGC...CGCCACTGTCCATCGAATGTGCCATTCTGATCCAAATCTTCCAGGCCCCCTCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCCCCTGCAGGGAACTCAGCTCCCGAAGCCGACCCAGCTCCTCTGTCAGTTCTATGTCACATTCCGACTaGTTGGAGGCCAGATCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: LPCRELSSRSRPSSSVSSMSHSD*LEARSW Trigger: CCAGGATCTGGCCTCCAACCAGTCGGAATGTGACAT...AGAACTGACAGAGGAGCTGGGTCGGCTTCGGGAGCTGAGTTCCCTGCAGGGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
||
| 3UTR-3UTR TCA 90 bp | AAATTAATCTCCACAGCACCCTGGGCCCAATCTCAGGTTCTGGCCTGGAAGGCAGGAAAGAGCCAGAGCTaGGTGGTGCCTGGACCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: KLISTAPWAQSQVLAWKAGKSQS*VVPGPG Trigger: CCCTGGTCCAGGCACCACTCAGCTCTGGCTCTTTCC...TGCCTTCCAGGCCAGAACCTGAGATTGGGCCCAGGGTGCTGTGGAGATTAATTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGGGGCCTGGAAGATTTGGATCAGAATGGCACATTCGATGGACAGTGGCGTTCGCTAGTGGAGGTATCTaGGGACCGCAAGGGGCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: RGPGRFGSEWHIRWTVAFASGGI*GPQGAG Trigger: CCCTGCCCCTTGCGGTCCCCAGATACCTCCACTAGC...GAACGCCACTGTCCATCGAATGTGCCATTCTGATCCAAATCTTCCAGGCCCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGAGGGGGCCTGGAAGATTTGGATCAGAATGGCACATTCGATGGACAGTGGCGAGAGCCAGAGCTGAGTaGTGCCTGGACCAGGGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: GRGPGRFGSEWHIRWTVARARAE*CLDQGR Trigger: TCTTCCCTGGTCCAGGCACCACTCAGCTCTGGCTCT...CGCCACTGTCCATCGAATGTGCCATTCTGATCCAAATCTTCCAGGCCCCCTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| 3UTR-3UTR CCA 90 bp | CATCGGCTGGCCGAGGCCCCAGGGAGGCTCAAAGCGAGGGGTGGATTCATAGTGAAAGGCAGAGAGAGGTaGAGGGTATATCCTCCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: HRLAEAPGRLKARGGFIVKGRER*RVYPPH Trigger: ATGAGGAGGATATACCCTCCACCTCTCTCTGCCTTT...CACTATGAATCCACCCCTCGCTTTGAGCCTCCCTGGGGCCTCGGCCAGCCGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| 3UTR-3UTR TCA 90 bp | AACAGAAAGGCAGAGAGAGGTGGAGGGTATATCCTCCTCATCCCAGACCAGATCGGAAAGAGCCAGAGCTaGGTGGTGCCTGGACCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: NRKAERGGGYILLIPDQIGKSQS*VVPGPG Trigger: CCCTGGTCCAGGCACCACTCAGCTCTGGCTCTTTCC...GATCTGGTCTGGGATGAGGAGGATATACCCTCCACCTCTCTCTGCCTTTCTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTGGGGAGGGGGCCTGGAAGATTTGGATCAGAATGGCACATTCGATGGACAGTCCTGGTTTCCCAGGGTaGGCAGAGGGGGAGAACAGA | + |
|
Preference number: 2 (lower is better) Translates to: CGEGAWKIWIRMAHSMDSPGFPG*AEGENR Trigger: TCTGTTCTCCCCCTCTGCTCACCCTGGGAAACCAGG...ACTGTCCATCGAATGTGCCATTCTGATCCAAATCTTCCAGGCCCCCTCCCCACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| 3UTR-3UTR GCA 90 bp | GCAGACTCTCTGCTCTGCATCTCAATTACCCAGGCTGAGGGAAGCAGTACACTAGCCTTTGGCCTGCGTTaGGGGCCTGTTCCTGCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: ADSLLCISITQAEGSSTLAFGLR*GPVPAA Trigger: TGCTGCAGGAACAGGCCCGCAACGCAGGCCAAAGGC...TAGTGTACTGCTTCCCTCAGCCTGGGTAATTGAGATGCAGAGCAGAGAGTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
||
| 3UTR-3UTR CCA 90 bp | AACAGAAAGGCAGAGAGAGGTGGAGGGTATATCCTCCTCATCCCAGACCAGATCGCTAGTGGAGGTATCTaGGGACCGCAAGGGGCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: NRKAERGGGYILLIPDQIASGGI*GPQGAG Trigger: CCCTGCCCCTTGCGGTCCCCAGATACCTCCACTAGC...GATCTGGTCTGGGATGAGGAGGATATACCCTCCACCTCTCTCTGCCTTTCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGGGGCCTGGAAGATTTGGATCAGAATGGCACATTCGATGGACAGTGGCGTTCGCTCTGGGGAACCTGTaGTGTCAGGAGCTGCAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: RGPGRFGSEWHIRWTVAFALGNL*CQELQW Trigger: CCACTGCAGCTCCTGACACCACAGGTTCCCCAGAGC...GAACGCCACTGTCCATCGAATGTGCCATTCTGATCCAAATCTTCCAGGCCCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTGGGGAGGGGGCCTGGAAGATTTGGATCAGAATGGCACATTCGATGGACAGTCCCAATCTCAGGTTCTaGCCTGGAAGGCAGGGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: CGEGAWKIWIRMAHSMDSPNLRF*PGRQGL Trigger: CAGCCCCTGCCTTCCAGGCCAGAACCTGAGATTGGG...ACTGTCCATCGAATGTGCCATTCTGATCCAAATCTTCCAGGCCCCCTCCCCACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| 3UTR-3UTR TCA 90 bp | AGGGGGCCTGGAAGATTTGGATCAGAATGGCACATTCGATGGACAGTGGCGTTCCTCCTCTCCCTCCCCTaGGCACTAGACTTCCTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: RGPGRFGSEWHIRWTVAFLLSLP*ALDFLL Trigger: CAAGAGGAAGTCTAGTGCTCAGGGGAGGGAGAGGAG...GAACGCCACTGTCCATCGAATGTGCCATTCTGATCCAAATCTTCCAGGCCCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| 3UTR-3UTR TCA 90 bp | AGGGGGCCTGGAAGATTTGGATCAGAATGGCACATTCGATGGACAGTGGCGTTCCAAGCTGGTCGGTCATaGGACAGAAGGGCTGGCATC | + |
|
Preference number: 2 (lower is better) Translates to: RGPGRFGSEWHIRWTVAFQAGRS*DRRAGI Trigger: GATGCCAGCCCTTCTGTCTCATGACCGACCAGCTTG...GAACGCCACTGTCCATCGAATGTGCCATTCTGATCCAAATCTTCCAGGCCCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| 3UTR-3UTR GCA 90 bp | CTACTGTGTGTGAAGATAAGCAATGAGGTGCGACCCCAGAGAGAGGGCAGACTCCTCAAGATCCTCCCCTaGAGGGAACTCAGCTCCCGA | + |
|
Preference number: 2 (lower is better) Translates to: LLCVKISNEVRPQREGRLLKILP*RELSSR Trigger: TCGGGAGCTGAGTTCCCTGCAGGGGAGGATCTTGAG...GAGTCTGCCCTCTCTCTGGGGTCGCACCTCATTGCTTATCTTCACACACAGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
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| 3UTR-3UTR CCA 90 bp | GGAAAGACAGACATTTGGGAAGGGGCTCCCAGAGCTCTTGACACCTCCTCCTCTAGATGGGGAGAGCCTTaGTCGACCTCCAGGAAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: GKTDIWEGAPRALDTSSSRWGEP*STSRKE Trigger: CTCTTTCCTGGAGGTCGACCAAGGCTCTCCCCATCT...AGAGGAGGAGGTGTCAAGAGCTCTGGGAGCCCCTTCCCAAATGTCTGTCTTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGGGGAGGGGGCCTGGAAGATTTGGATCAGAATGGCACATTCGATGGACAGTAGGCTGAGTCACACTTaGGCTCTGGGGAACCTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: CGEGAWKIWIRMAHSMDSRLSHT*ALGNLW Trigger: CCACAGGTTCCCCAGAGCCCAAGTGTGACTCAGCCT...ACTGTCCATCGAATGTGCCATTCTGATCCAAATCTTCCAGGCCCCCTCCCCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| 3UTR-3UTR TCA 90 bp | CTACTGTGTGTGAAGATAAGCAATGAGGTGCGACCCCAGAGAGAGGGCAGACTCACAGACAGGTGTGGGTaGGAAAGGCCACGTCAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: LLCVKISNEVRPQREGRLTDRCG*ERPRQS Trigger: GCTTTGACGTGGCCTTTCTCACCCACACCTGTCTGT...GAGTCTGCCCTCTCTCTGGGGTCGCACCTCATTGCTTATCTTCACACACAGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
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| 3UTR-3UTR GCA 90 bp | CTAGACTTCCTCTTGGAGACAACCCTGTTGAAGAACAGAAAGGCAGAGAGAGGTGCCAGAGCTGAGTGGTaGCTGGACCAGGGAAGACGG | + |
|
Preference number: 2 (lower is better) Translates to: LDFLLETTLLKNRKAERGARAEW*LDQGRR Trigger: CCGTCTTCCCTGGTCCAGGCACCACTCAGCTCTGGC...ACCTCTCTCTGCCTTTCTGTTCTTCAACAGGGTTGTCTCCAAGAGGAAGTCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| 3UTR-3UTR GCA 90 bp | TGGGTGGGTAGGTATGGGAAGGGGGTTAGCTCTTTTGAAATTAATCTCCACAGCGTCCTCCCACCCCTCTaGCACCTGGTTTCCCAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: WVGRYGKGVSSFEINLHSVLPPL*HLVSQG Trigger: ACCCTGGGAAACCAGGTGGCAGAGGGGTGGGAGGAC...GCTGTGGAGATTAATTTCAAAAGAGCTAACCCCCTTCCCATACCTACCCACCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| 3UTR-3UTR CCA 90 bp | CTAGACTTCCTCTTGGAGACAACCCTGTTGAAGAACAGAAAGGCAGAGAGAGGTGCTAGTGGAGGTATCTaGGGACCGCAAGGGGCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: LDFLLETTLLKNRKAERGASGGI*GPQGAG Trigger: CCCTGCCCCTTGCGGTCCCCAGATACCTCCACTAGC...ACCTCTCTCTGCCTTTCTGTTCTTCAACAGGGTTGTCTCCAAGAGGAAGTCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| 3UTR-3UTR CCA 90 bp | AAATTAATCTCCACAGCACCCTGGGCCCAATCTCAGGTTCTGGCCTGGAAGGCATGGAAACCAGGAAGATaGGGAGAGCCTTGGTCGACC | + |
|
Preference number: 2 (lower is better) Translates to: KLISTAPWAQSQVLAWKAWKPGR*GEPWST Trigger: GGTCGACCAAGGCTCTCCCCATCTTCCTGGTTTCCA...TGCCTTCCAGGCCAGAACCTGAGATTGGGCCCAGGGTGCTGTGGAGATTAATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGGGCCTGGAAGATTTGGATCAGAATGGCACATTCGATGGACAGTGGCGTTCATCTCCACAGCACCCTaGGCCCAATCTCAGGTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: RGPGRFGSEWHIRWTVAFISTAP*AQSQVL Trigger: CAGAACCTGAGATTGGGCCCAGGGTGCTGTGGAGAT...GAACGCCACTGTCCATCGAATGTGCCATTCTGATCCAAATCTTCCAGGCCCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCTCCTCTGTCAGTTCTGTGTAGGCCAGCGCCAAGTTCACCCTCGGGTCCAGGCCACGTCAAAGCTTTaGCCTTTAAGGTACTGGATT | + |
|
Preference number: 2 (lower is better) Translates to: QLLCQFCVGQRQVHPRVQATSKL*PLRYWI Trigger: AATCCAGTACCTTAAAGGCCAAAGCTTTGACGTGGC...CTGGACCCGAGGGTGAACTTGGCGCTGGCCTACACAGAACTGACAGAGGAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGGGCCTGGAAGATTTGGATCAGAATGGCACATTCGATGGACAGTGGCGTTCGGAAAGACAGACATTTaGGAAGGGGCTCCCAGAGCT | + |
|
Preference number: 2 (lower is better) Translates to: RGPGRFGSEWHIRWTVAFGKTDI*EGAPRA Trigger: AGCTCTGGGAGCCCCTTCCCAAATGTCTGTCTTTCC...GAACGCCACTGTCCATCGAATGTGCCATTCTGATCCAAATCTTCCAGGCCCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| 3UTR-3UTR CCA 90 bp | CCATGTCCCCTCCCTGGGGAACACTCAGGGTACAATGACATGTCTCTGGAGTCCTCAAGAGGTCTTTCCTaGAAGAACACAGCCCAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: PCPLPGEHSGYNDMSLESSRGLS*KNTAQE Trigger: TTCCTGGGCTGTGTTCTTCCAGGAAAGACCTCTTGA...GGACTCCAGAGACATGTCATTGTACCCTGAGTGTTCCCCAGGGAGGGGACATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGTGGGTAGGTATGGGAAGGGGGTTAGCTCTTTTGAAATTAATCTCCACAGCCCCAATCTCAGGTTCTaGCCTGGAAGGCAGGGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: WVGRYGKGVSSFEINLHSPNLRF*PGRQGL Trigger: CAGCCCCTGCCTTCCAGGCCAGAACCTGAGATTGGG...GCTGTGGAGATTAATTTCAAAAGAGCTAACCCCCTTCCCATACCTACCCACCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCTCCCTCCCCTGAGCACTAGACTTCCTCTTGGAGACAACCCTGTTGAAGAAAAAGGCAGAGAGAGGTaGAGGGTATATCCTCCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: PLPPLSTRLPLGDNPVEEKGRER*RVYPPH Trigger: ATGAGGAGGATATACCCTCCACCTCTCTCTGCCTTT...TTCTTCAACAGGGTTGTCTCCAAGAGGAAGTCTAGTGCTCAGGGGAGGGAGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTGGGGAGGGGGCCTGGAAGATTTGGATCAGAATGGCACATTCGATGGACAGTAAAGGCAGAGAGAGGTaGAGGGTATATCCTCCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: CGEGAWKIWIRMAHSMDSKGRER*RVYPPH Trigger: ATGAGGAGGATATACCCTCCACCTCTCTCTGCCTTT...ACTGTCCATCGAATGTGCCATTCTGATCCAAATCTTCCAGGCCCCCTCCCCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGGTGGGTAGGTATGGGAAGGGGGTTAGCTCTTTTGAAATTAATCTCCACAGCAGAGCTGGCCTGCAGTaGCTAACAAGAAATAAGATG | + |
|
Preference number: 2 (lower is better) Translates to: WVGRYGKGVSSFEINLHSRAGLQ*LTRNKM Trigger: CATCTTATTTCTTGTTAGTCACTGCAGGCCAGCTCT...GCTGTGGAGATTAATTTCAAAAGAGCTAACCCCCTTCCCATACCTACCCACCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| 3UTR CCA 72 bp | CCTGGAAGCCGGCCTTGGCGTGGTGGCTGGGCGGCTTaGCGTAGACACGCTCGGCCAGCGTCCTCTCCCCCG | + |
|
Preference number: 3 (lower is better) Translates to: PGSRPWRGGWAA*RRHARPASSPP Trigger: CGGGGGAGAGGACGCTGGCCGAGCGTGTCTACGCCAAGCCGCCCAGCCACCACGCCAAGGCCGGCTTCCAGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
||
| 3UTR CCA 72 bp | GCCTGCCGTAGAGCTCGCCGCCATAGGCGCGGGGCTTaGGAAGTGTGGCAGCCTCGGCCTGTAGCCAGGCGG | + |
|
Preference number: 3 (lower is better) Translates to: ACRRARRHRRGA*EVWQPRPVARR Trigger: CCGCCTGGCTACAGGCCGAGGCTGCCACACTTCCCAAGCCCCGCGCCTATGGCGGCGAGCTCTACGGCAGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
||
| 3UTR CCA 72 bp | GGATGGGGAAGCCCGCACAGAATGAAGCGCAGCGGATaGTGCCCGCTTCGGGACTGGGCGGGCTGGCCGGCA | + |
|
Preference number: 3 (lower is better) Translates to: GWGSPHRMKRSG*CPLRDWAGWPA Trigger: TGCCGGCCAGCCCGCCCAGTCCCGAAGCGGGCACCATCCGCTGCGCTTCATTCTGTGCGGGCTTCCCCATCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
||
| 3UTR TCA 72 bp | GCACGCAGGGGCCGGGGAGTGACGTTGCGACAGCGGTaGGTGCCTTTGGCCTGCGTTGCGGGCCTGTTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: ARRGRGVTLRQR*VPLACVAGLFL Trigger: CAGGAACAGGCCCGCAACGCAGGCCAAAGGCACTCACCGCTGTCGCAACGTCACTCCCCGGCCCCTGCGTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGGGGCCGGGGAGTGACGTTGCGACAGCGGTGAGTGCCTTTGGCCTGCGTTGCGCATTCCGCCTGGAGTaGCTCCTCCCGGAGCTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: QGPGSDVATAVSAFGLRCAFRLE*LLPELS Trigger: GCTCAGCTCCGGGAGGAGCAACTCCAGGCGGAATGC...GCAACGCAGGCCAAAGGCACTCACCGCTGTCGCAACGTCACTCCCCGGCCCCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
||
| 3UTR CCA 72 bp | GCTGGCCGAGGCCCCAGGGAGGCTCAAAGCGAGGGGTaGATTCATAGTGGGCAGCAGACTCCCTCGGGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: AGRGPREAQSEG*IHSGQQTPSGG Trigger: GCCTCCCGAGGGAGTCTGCTGCCCACTATGAATCCACCCCTCGCTTTGAGCCTCCCTGGGGCCTCGGCCAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCGTTCACTGCCATCGGCTGGCCGAGGCCCCAGGGAGGCTCAAAGCGAGGGGTCTCAAGGCAGCCCCTTaGGGCTGGATCATCCAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: GVHCHRLAEAPGRLKARGLKAAP*GWIIQG Trigger: GCCTTGGATGATCCAGCCCAAAGGGGCTGCCTTGAG...ACCCCTCGCTTTGAGCCTCCCTGGGGCCTCGGCCAGCCGATGGCAGTGAACGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| 3UTR CCA 72 bp | CACATTCGATGGACAGTGGCGTTCACTGCCATCGGCTaGCCGAGGCCCCAGGGAGGCTCAAAGCGAGGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: HIRWTVAFTAIG*PRPQGGSKRGV Trigger: CACCCCTCGCTTTGAGCCTCCCTGGGGCCTCGGCCAGCCGATGGCAGTGAACGCCACTGTCCATCGAATGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| 3UTR TCA 72 bp | CTTCCCCAGTACCACGAGCCCCAAGCTGGTCGGTCATaGGACAGAAGGGCTGGCATCAGTGTGCAGGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LPQYHEPQAGRS*DRRAGISVQGR Trigger: CCTGCCCTGCACACTGATGCCAGCCCTTCTGTCTCATGACCGACCAGCTTGGGGCTCGTGGTACTGGGGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| 3UTR TCA 72 bp | TGGGCCCGGGTCTCCTGCAGTTGCTTCAGCTCTCCCTaGAGTCTCTCGCATTCCGCCTGGAGTTGCTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: WARVSCSCFSSP*SLSHSAWSCSS Trigger: GGAGGAGCAACTCCAGGCGGAATGCGAGAGACTTCAGGGAGAGCTGAAGCAACTGCAGGAGACCCGGGCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
||
| 3UTR GCA 72 bp | CAGTACACTACTCACGTTGATGGATGGCCAGGACTGTaGGTGCTCAGCGTGGGCATAGGCGGTGGCCGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: QYTTHVDGWPGL*VLSVGIGGGRR Trigger: CCTGCGGCCACCGCCTATGCCCACGCTGAGCACGCACAGTCCTGGCCATCCATCAACGTGAGTAGTGTACTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCCTCTGTCAGTTCTGTGTAGGCCAGCGCCAAGTTCACCCTCGGGTCCAGTCTCCGGAGGCCCTGCTGTaGCTGCAGCTGTTTCTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LLCQFCVGQRQVHPRVQSPEALL*LQLFLQ Trigger: CTGGAGAAACAGCTGCAGCAACAGCAGGGCCTCCGG...AGACTGGACCCGAGGGTGAACTTGGCGCTGGCCTACACAGAACTGACAGAGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
||
| 3UTR TCA 72 bp | TGCCTTGGTGATCTGCACCTTAGTGCCAGGGGCTCCTaGAGAGCCCAGGCCTGTGAGGCTGGCAGACAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: CLGDLHLSARGS*RAQACEAGRQF Trigger: GAACTGTCTGCCAGCCTCACAGGCCTGGGCTCTTCAGGAGCCCCTGGCACTAAGGTGCAGATCACCAAGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| 3UTR CCA 72 bp | GACCAGATCCCCGCTCCCCAGTGGAAACCAGGAAGATaGGGAGAGCCTTGGTCGACCTCCAGGAAAGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: DQIPAPQWKPGR*GEPWSTSRKEP Trigger: TGGCTCTTTCCTGGAGGTCGACCAAGGCTCTCCCCATCTTCCTGGTTTCCACTGGGGAGCGGGGATCTGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| 3UTR CCA 72 bp | TCCACAGCACCCTGGGCCCAATCTCAGGTTCTGGCCTaGAAGGCAGGGGCTGATGACACCTACCCAGCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: STAPWAQSQVLA*KAGADDTYPAN Trigger: GTTTGCTGGGTAGGTGTCATCAGCCCCTGCCTTCCAGGCCAGAACCTGAGATTGGGCCCAGGGTGCTGTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| 3UTR CCA 72 bp | CCAACTCTCTTGACCCAAGCCATGTCACATTCCGACTaGTTGGAGGCCAGATCCTGGGCCCGGGTCTCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: PTLLTQAMSHSD*LEARSWARVSC Trigger: GCAGGAGACCCGGGCCCAGGATCTGGCCTCCAACCAGTCGGAATGTGACATGGCTTGGGTCAAGAGAGTTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCCTCTGTCAGTTCTGTGTAGGCCAGCGCCAAGTTCACCCTCGGGTCCAGTCTCCGGGTCTCCTGCAGTaGCTTCAGCTCTCCCTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LLCQFCVGQRQVHPRVQSPGLLQ*LQLSLK Trigger: CTTCAGGGAGAGCTGAAGCAACTGCAGGAGACCCGG...AGACTGGACCCGAGGGTGAACTTGGCGCTGGCCTACACAGAACTGACAGAGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
||
| 3UTR TCA 72 bp | GCAGGGGCTGATGACACCTACCCAGCAAACACAGGCTaGGTCACACTTGGGCTCTGGGGAACCTGTGGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: AGADDTYPANTG*VTLGLWGTCGV Trigger: GACACCACAGGTTCCCCAGAGCCCAAGTGTGACTCAGCCTGTGTTTGCTGGGTAGGTGTCATCAGCCCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| 3UTR GCA 72 bp | ATCAGAATGGCACATTCGATGGACAGTGGCGTTCACTaGCATCGGCTGGCCGAGGCCCCAGGGAGGCTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: IRMAHSMDSGVH*HRLAEAPGRLK Trigger: TTTGAGCCTCCCTGGGGCCTCGGCCAGCCGATGGCAGTGAACGCCACTGTCCATCGAATGTGCCATTCTGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| 3UTR GCA 72 bp | CTGGCCGGCATAGCCCACTCCTCTTCTTCAGATGGCTaGTTCTCAAAGCGCAGGCGGATGCCCTCAAAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LAGIAHSSSSDG*FSKRRRMPSKA Trigger: AGCCTTTGAGGGCATCCGCCTGCGCTTTGAGAAGCAGCCATCTGAAGAAGAGGAGTGGGCTATGCCGGCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTGGGGAGGGGGCCTGGAAGATTTGGATCAGAATGGCACATTCGATGGACAGTGGGCTCCCAGAGCTCTaGACACCTCCTCCTCTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: CGEGAWKIWIRMAHSMDSGLPEL*TPPPLP Trigger: AGGGAGAGGAGGAGGTGTCAAGAGCTCTGGGAGCCC...ACTGTCCATCGAATGTGCCATTCTGATCCAAATCTTCCAGGCCCCCTCCCCACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| 3UTR TCA 72 bp | TTACCCAGGCTGAGGGAAGCAGTACACTACTCACGTTaGTGGATGGCCAGGACTGTGCGTGCTCAGCGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LPRLREAVHYSR*WMARTVRAQRG Trigger: CCCACGCTGAGCACGCACAGTCCTGGCCATCCATCAACGTGAGTAGTGTACTGCTTCCCTCAGCCTGGGTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
||
| 3UTR CCA 72 bp | TCGACCTCCAGGAAAGAGCCAGAGCTGAGTGGTGCCTaGACCAGGGAAGACGGCACACACATTGACTCGGTA | + |
|
Preference number: 3 (lower is better) Translates to: STSRKEPELSGA*TREDGTHIDSV Trigger: TACCGAGTCAATGTGTGTGCCGTCTTCCCTGGTCCAGGCACCACTCAGCTCTGGCTCTTTCCTGGAGGTCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| 3UTR CCA 72 bp | AAGATGCCTCCTTCCCCAGTACCACGAGCCCCAAGCTaGTCGGTCATGAGACAGAAGGGCTGGCATCAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: KMPPSPVPRAPS*SVMRQKGWHQC Trigger: ACACTGATGCCAGCCCTTCTGTCTCATGACCGACCAGCTTGGGGCTCGTGGTACTGGGGAAGGAGGCATCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| 3UTR CCA 72 bp | GGGCCTGGAAGATTTGGATCAGAATGGCACATTCGATaGACAGTGGCGTTCACTGCCATCGGCTGGCCGAGG | + |
|
Preference number: 3 (lower is better) Translates to: GPGRFGSEWHIR*TVAFTAIGWPR Trigger: CCTCGGCCAGCCGATGGCAGTGAACGCCACTGTCCATCGAATGTGCCATTCTGATCCAAATCTTCCAGGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| 3UTR-3UTR CAA 90 bp | GATGGACAGTGGCGTTCACTGCCATCGGCTGGCCGAGGCCCCAGGGAGGCTCAAAGGGGGTTAGCTCTTTaGAAATTAATCTCCACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: DGQWRSLPSAGRGPREAQRGLAL*KLISTA Trigger: TGCTGTGGAGATTAATTTCAAAAGAGCTAACCCCCT...TTGAGCCTCCCTGGGGCCTCGGCCAGCCGATGGCAGTGAACGCCACTGTCCATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| 3UTR GCA 72 bp | CTGGTCGGTCATGAGACAGAAGGGCTGGCATCAGTGTaGAGGGCAGGCTCTGAGACCCTATCAAGAGGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: LVGHETEGLASV*RAGSETLSRGL Trigger: AAGACCTCTTGATAGGGTCTCAGAGCCTGCCCTGCACACTGATGCCAGCCCTTCTGTCTCATGACCGACCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGGTGGGTAGGTATGGGAAGGGGGTTAGCTCTTTTGAAATTAATCTCCACAGCCAGGCTGAGTCACACTaGGGCTCTGGGGAACCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: WVGRYGKGVSSFEINLHSQAESH*GSGEPV Trigger: CACAGGTTCCCCAGAGCCCAAGTGTGACTCAGCCTG...GCTGTGGAGATTAATTTCAAAAGAGCTAACCCCCTTCCCATACCTACCCACCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| 3UTR TCA 72 bp | GGCAGACTCTCTGCTCTGCATCTCAATTACCCAGGCTaGGGGAAGCAGTACACTACTCACGTTGATGGATGG | + |
|
Preference number: 3 (lower is better) Translates to: GRLSALHLNYPG*GKQYTTHVDGW Trigger: CCATCCATCAACGTGAGTAGTGTACTGCTTCCCTCAGCCTGGGTAATTGAGATGCAGAGCAGAGAGTCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
||
| 3UTR CCA 72 bp | AAGTTCACCCTCGGGTCCAGTCTAGACAGACAGGTGTaGGTGAGAAAGGCCACGTCAAAGCTTTGGCCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: KFTLGSSLDRQV*VRKATSKLWPL Trigger: TAAAGGCCAAAGCTTTGACGTGGCCTTTCTCACCCACACCTGTCTGTCTAGACTGGACCCGAGGGTGAACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAAGACAGACATTTGGGAAGGGGCTCCCAGAGCTCTTGACACCTCCTCCTCTCTTGGAGACAACCCTGTaGAAGAACAGAAAGGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: ERQTFGKGLPELLTPPPLLETTL*KNRKAE Trigger: CTCTGCCTTTCTGTTCTTCAACAGGGTTGTCTCCAA...GAGAGGAGGAGGTGTCAAGAGCTCTGGGAGCCCCTTCCCAAATGTCTGTCTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGGGGCCTGGAAGATTTGGATCAGAATGGCACATTCGATGGACAGTGGCGTTCTTGGAGACAACCCTGTaGAAGAACAGAAAGGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: RGPGRFGSEWHIRWTVAFLETTL*KNRKAE Trigger: CTCTGCCTTTCTGTTCTTCAACAGGGTTGTCTCCAA...GAACGCCACTGTCCATCGAATGTGCCATTCTGATCCAAATCTTCCAGGCCCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | CGTGGTGGCTGGGCGGCTTGGCGTAGACACGCTCGGCCAGCGTCCTCTCCCCCGGGCGACGGCGGAGGGTaGCATTCTCCCTCTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RGGWAAWRRHARPASSPPGDGGG*HSPSPG Trigger: GCCTGGAGAGGGAGAATGCCACCCTCCGCCGTCGCC...CGGGGGAGAGGACGCTGGCCGAGCGTGTCTACGCCAAGCCGCCCAGCCACCACG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
||
| CDS-3UTR GCA 90 bp | GACAGTGGCGTTCACTGCCATCGGCTGGCCGAGGCCCCAGGGAGGCTCAAAGCGCCAGCTCCGAGTAGCTaGGGCGGCCCTGGAAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: DSGVHCHRLAEAPGRLKAPAPSS*GGPGSR Trigger: CCGGCTTCCAGGGCCGCCGCAGCTACTCGGAGCTGG...CGCTTTGAGCCTCCCTGGGGCCTCGGCCAGCCGATGGCAGTGAACGCCACTGTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR TCA 90 bp | GATGGACAGTGGCGTTCACTGCCATCGGCTGGCCGAGGCCCCAGGGAGGCTCAAGCAGGGGCCGGGGAGTaGCGTTGCGACAGCGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DGQWRSLPSAGRGPREAQAGAGE*RCDSGE Trigger: CTCACCGCTGTCGCAACGTCACTCCCCGGCCCCTGC...TTGAGCCTCCCTGGGGCCTCGGCCAGCCGATGGCAGTGAACGCCACTGTCCATC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | GACAGTGGCGTTCACTGCCATCGGCTGGCCGAGGCCCCAGGGAGGCTCAAAGCGAAGCGCAGCGGATGGTaGCCGCTTCGGGACTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: DSGVHCHRLAEAPGRLKAKRSGW*PLRDWA Trigger: CGCCCAGTCCCGAAGCGGGCACCATCCGCTGCGCTT...CGCTTTGAGCCTCCCTGGGGCCTCGGCCAGCCGATGGCAGTGAACGCCACTGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR TCA 90 bp | GATGGACAGTGGCGTTCACTGCCATCGGCTGGCCGAGGCCCCAGGGAGGCTCAAGGGCCAGGCCAACCATaGCCCAAGGCAGGTCCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: DGQWRSLPSAGRGPREAQGPGQP*PKAGPP Trigger: AGGGGGACCTGCCTTGGGTCATGGTTGGCCTGGCCC...TTGAGCCTCCCTGGGGCCTCGGCCAGCCGATGGCAGTGAACGCCACTGTCCATC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | CATCGGCTGGCCGAGGCCCCAGGGAGGCTCAAAGCGAGGGGTGGATTCATAGTGAGCGGCGCTGAGGACTaGGCGACTGGCACGACGGCG | + |
|
Preference number: 4 (lower is better) Translates to: HRLAEAPGRLKARGGFIVSGAED*ATGTTA Trigger: CGCCGTCGTGCCAGTCGCCCAGTCCTCAGCGCCGCT...CACTATGAATCCACCCCTCGCTTTGAGCCTCCCTGGGGCCTCGGCCAGCCGATG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | CATCGGCTGGCCGAGGCCCCAGGGAGGCTCAAAGCGAGGGGTGGATTCATAGTGAAGCCGGCCTTGGCGTaGTGGCTGGGCGGCTTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: HRLAEAPGRLKARGGFIVKPALA*WLGGLA Trigger: CGCCAAGCCGCCCAGCCACCACGCCAAGGCCGGCTT...CACTATGAATCCACCCCTCGCTTTGAGCCTCCCTGGGGCCTCGGCCAGCCGATG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGAGAGAGGTGGAGGGTATATCCTCCTCATCCCAGACCAGATCCCCGCTCCGCGGCGCTGTGGGACTaGGGACGGGCAGGACGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: GRERWRVYPPHPRPDPRSAALWD*GRAGRR Trigger: TCGCCGTCCTGCCCGTCCCCAGTCCCACAGCGCCGC...GGAGCGGGGATCTGGTCTGGGATGAGGAGGATATACCCTCCACCTCTCTCTGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR TCA 90 bp | GGCGTTCACTGCCATCGGCTGGCCGAGGCCCCAGGGAGGCTCAAAGCGAGGGGTGTCGTTGCTGCAGACTaGCCTTCTCCACCTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GVHCHRLAEAPGRLKARGVVAAD*PSPPPA Trigger: TGCTGGAGGTGGAGAAGGTCAGTCTGCAGCAACGAC...ACCCCTCGCTTTGAGCCTCCCTGGGGCCTCGGCCAGCCGATGGCAGTGAACGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR TCA 90 bp | GCTGAGTCACACTTGGGCTCTGGGGAACCTGTGGTGTCAGGAGCTGCAGTGGGGCAAGTCAGGACAGGCTaGGGCGGGGACAGCTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: AESHLGSGEPVVSGAAVGQVRTG*GGDSWG Trigger: CCCCCAGCTGTCCCCGCCTCAGCCTGTCCTGACTTG...CCCCACTGCAGCTCCTGACACCACAGGTTCCCCAGAGCCCAAGTGTGACTCAGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR TCA 90 bp | CATCGGCTGGCCGAGGCCCCAGGGAGGCTCAAAGCGAGGGGTGGATTCATAGTGCCAGGCCAACCTGCATaGCCCAAGGCAGGTCCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: HRLAEAPGRLKARGGFIVPGQPA*PKAGPP Trigger: AGGGGGACCTGCCTTGGGTCATGCAGGTTGGCCTGG...CACTATGAATCCACCCCTCGCTTTGAGCCTCCCTGGGGCCTCGGCCAGCCGATG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000066078.12 |
||
| CDS-3UTR TCA 90 bp | TCACACTTGGGCTCTGGGGAACCTGTGGTGTCAGGAGCTGCAGTGGGGGTGATGGCAGGGGCCGGGGAGTaGCGTTGCGACAGCGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SHLGSGEPVVSGAAVGVMAGAGE*RCDSGE Trigger: CTCACCGCTGTCGCAACGTCACTCCCCGGCCCCTGC...CATCACCCCCACTGCAGCTCCTGACACCACAGGTTCCCCAGAGCCCAAGTGTGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR TCA 90 bp | AAGATGGGGAGAGCCTTGGTCGACCTCCAGGAAAGAGCCAGAGCTGAGTGGTGCAGGCTCGGCGCGGGCTaGGCGGCCTGCCGTAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KMGRALVDLQERARAEWCRLGAG*AACRRA Trigger: AGCTCTACGGCAGGCCGCTCAGCCCGCGCCGAGCCT...GCACCACTCAGCTCTGGCTCTTTCCTGGAGGTCGACCAAGGCTCTCCCCATCTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR TCA 90 bp | GCTGGCAGACAGTTCCCTGGATTGAGGGTAATGGCCCAGGAGTCCCAGCCTCAAAGGCTCGGCGCGGGCTaGGCGGCCTGCCGTAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AGRQFPGLRVMAQESQPQRLGAG*AACRRA Trigger: AGCTCTACGGCAGGCCGCTCAGCCCGCGCCGAGCCT...TTGAGGCTGGGACTCCTGGGCCATTACCCTCAATCCAGGGAACTGTCTGCCAGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | GGCGTTCACTGCCATCGGCTGGCCGAGGCCCCAGGGAGGCTCAAAGCGAGGGGTGGCCCCAAGGCCTCTTaGGTCAGGATGCTGATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GVHCHRLAEAPGRLKARGGPKAS*VRMLMS Trigger: TGACATCAGCATCCTGACCCAAGAGGCCTTGGGGCC...ACCCCTCGCTTTGAGCCTCCCTGGGGCCTCGGCCAGCCGATGGCAGTGAACGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | GCTGAGTCACACTTGGGCTCTGGGGAACCTGTGGTGTCAGGAGCTGCAGTGGGGGGCGACGGCGGAGGGTaGCATTCTCCCTCTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: AESHLGSGEPVVSGAAVGGDGGG*HSPSPG Trigger: GCCTGGAGAGGGAGAATGCCACCCTCCGCCGTCGCC...CCCCACTGCAGCTCCTGACACCACAGGTTCCCCAGAGCCCAAGTGTGACTCAGC 66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | GATGGACAGTGGCGTTCACTGCCATCGGCTGGCCGAGGCCCCAGGGAGGCTCAATTGGAGGCCAGATCCTaGGCCCGGGTCTCCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: DGQWRSLPSAGRGPREAQLEARS*ARVSCS Trigger: ACTGCAGGAGACCCGGGCCCAGGATCTGGCCTCCAA...TTGAGCCTCCCTGGGGCCTCGGCCAGCCGATGGCAGTGAACGCCACTGTCCATC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | GGGCTGATGACACCTACCCAGCAAACACAGGCTGAGTCACACTTGGGCTCTGGGGCGGCGCTGTGGGACTaGGGACGGGCAGGACGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: GLMTPTQQTQAESHLGSGAALWD*GRAGRR Trigger: TCGCCGTCCTGCCCGTCCCCAGTCCCACAGCGCCGC...CCCAGAGCCCAAGTGTGACTCAGCCTGTGTTTGCTGGGTAGGTGTCATCAGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | CAGACATTTGGGAAGGGGCTCCCAGAGCTCTTGACACCTCCTCCTCTCCCTCCCAGCGGCGCTGAGGACTaGGCGACTGGCACGACGGCG | + |
|
Preference number: 4 (lower is better) Translates to: QTFGKGLPELLTPPPLPPSGAED*ATGTTA Trigger: CGCCGTCGTGCCAGTCGCCCAGTCCTCAGCGCCGCT...GGGAGGGAGAGGAGGAGGTGTCAAGAGCTCTGGGAGCCCCTTCCCAAATGTCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | AGCCTCAAGGCAGCCCCTTTGGGCTGGATCATCCAAGGCCTGCAGGGTCCTCCCCCTTGGCGTGGTGGCTaGGCGGCTTGGCGTAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: SLKAAPLGWIIQGLQGPPPWRGG*AAWRRH Trigger: GTGTCTACGCCAAGCCGCCCAGCCACCACGCCAAGG...GGGAGGACCCTGCAGGCCTTGGATGATCCAGCCCAAAGGGGCTGCCTTGAGGCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGAGAGAGGTGGAGGGTATATCCTCCTCATCCCAGACCAGATCCCCGCTCCCCTGGAAGCCGGCCTTaGCGTGGTGGCTGGGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GRERWRVYPPHPRPDPRSPGSRP*RGGWAA Trigger: AGCCGCCCAGCCACCACGCCAAGGCCGGCTTCCAGG...GGAGCGGGGATCTGGTCTGGGATGAGGAGGATATACCCTCCACCTCTCTCTGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | GGCTGGCAGACAGTTCCCTGGATTGAGGGTAATGGCCCAGGAGTCCCAGCCTCACCTGGAAGCCGGCCTTaGCGTGGTGGCTGGGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GWQTVPWIEGNGPGVPASPGSRP*RGGWAA Trigger: AGCCGCCCAGCCACCACGCCAAGGCCGGCTTCCAGG...TGAGGCTGGGACTCCTGGGCCATTACCCTCAATCCAGGGAACTGTCTGCCAGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR TCA 90 bp | AGGAAGATGGGGAGAGCCTTGGTCGACCTCCAGGAAAGAGCCAGAGCTGAGTGGGCAGGGGCCGGGGAGTaGCGTTGCGACAGCGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RKMGRALVDLQERARAEWAGAGE*RCDSGE Trigger: CTCACCGCTGTCGCAACGTCACTCCCCGGCCCCTGC...CCACTCAGCTCTGGCTCTTTCCTGGAGGTCGACCAAGGCTCTCCCCATCTTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR TCA 90 bp | GACGGCACACACATTGACTCGGTAGCTAGTGGAGGTATCTGGGGACCGCAAGGGGCAGGGGCCGGGGAGTaGCGTTGCGACAGCGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DGTHIDSVASGGIWGPQGAGAGE*RCDSGE Trigger: CTCACCGCTGTCGCAACGTCACTCCCCGGCCCCTGC...CCCTTGCGGTCCCCAGATACCTCCACTAGCTACCGAGTCAATGTGTGTGCCGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR TCA 90 bp | GACGGCACACACATTGACTCGGTAGCTAGTGGAGGTATCTGGGGACCGCAAGGGACAGGCGAGCGGCGCTaGGGACTGGGCGACTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: DGTHIDSVASGGIWGPQGTGERR*GLGDWH Trigger: GTGCCAGTCGCCCAGTCCTCAGCGCCGCTCGCCTGT...CCCTTGCGGTCCCCAGATACCTCCACTAGCTACCGAGTCAATGTGTGTGCCGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | TCACACTTGGGCTCTGGGGAACCTGTGGTGTCAGGAGCTGCAGTGGGGGTGATGAAGCGCAGCGGATGGTaGCCGCTTCGGGACTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SHLGSGEPVVSGAAVGVMKRSGW*PLRDWA Trigger: CGCCCAGTCCCGAAGCGGGCACCATCCGCTGCGCTT...CATCACCCCCACTGCAGCTCCTGACACCACAGGTTCCCCAGAGCCCAAGTGTGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | GCTGAGTCACACTTGGGCTCTGGGGAACCTGTGGTGTCAGGAGCTGCAGTGGGGGGCAGAGGGGGCAGCTaGGGATATCAGAGCCCACCG | + |
|
Preference number: 4 (lower is better) Translates to: AESHLGSGEPVVSGAAVGGRGGS*GYQSPP Trigger: CGGTGGGCTCTGATATCCGCAGCTGCCCCCTCTGCC...CCCCACTGCAGCTCCTGACACCACAGGTTCCCCAGAGCCCAAGTGTGACTCAGC 64% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGAGAGAGGTGGAGGGTATATCCTCCTCATCCCAGACCAGATCCCCGCTCCGGCGACGGCGGAGGGTaGCATTCTCCCTCTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GRERWRVYPPHPRPDPRSGDGGG*HSPSPG Trigger: GCCTGGAGAGGGAGAATGCCACCCTCCGCCGTCGCC...GGAGCGGGGATCTGGTCTGGGATGAGGAGGATATACCCTCCACCTCTCTCTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | CAGACATTTGGGAAGGGGCTCCCAGAGCTCTTGACACCTCCTCCTCTCCCTCCCGGTGGCTGGGCGGCTTaGCGTAGACACGCTCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QTFGKGLPELLTPPPLPPGGWAA*RRHARP Trigger: TGGCCGAGCGTGTCTACGCCAAGCCGCCCAGCCACC...GGGAGGGAGAGGAGGAGGTGTCAAGAGCTCTGGGAGCCCCTTCCCAAATGTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGCAGACAGTTCCCTGGATTGAGGGTAATGGCCCAGGAGTCCCAGCCTCAAAAGCCGGCCTTGGCGTaGTGGCTGGGCGGCTTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: AGRQFPGLRVMAQESQPQKPALA*WLGGLA Trigger: CGCCAAGCCGCCCAGCCACCACGCCAAGGCCGGCTT...TTGAGGCTGGGACTCCTGGGCCATTACCCTCAATCCAGGGAACTGTCTGCCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| 3UTR CAA 72 bp | GCCCAGGCCTGTGAGGCTGGCAGACAGTTCCCTGGATaGAGGGTAATGGCCCAGGAGTCCCAGCCTCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: AQACEAGRQFPG*RVMAQESQPQG Trigger: GCCTTGAGGCTGGGACTCCTGGGCCATTACCCTCAATCCAGGGAACTGTCTGCCAGCCTCACAGGCCTGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR TCA 90 bp | GATGGACAGTGGCGTTCACTGCCATCGGCTGGCCGAGGCCCCAGGGAGGCTCAAGTCGTTGCTGCAGACTaGCCTTCTCCACCTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DGQWRSLPSAGRGPREAQVVAAD*PSPPPA Trigger: TGCTGGAGGTGGAGAAGGTCAGTCTGCAGCAACGAC...TTGAGCCTCCCTGGGGCCTCGGCCAGCCGATGGCAGTGAACGCCACTGTCCATC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR TCA 90 bp | AGGAAGATGGGGAGAGCCTTGGTCGACCTCCAGGAAAGAGCCAGAGCTGAGTGGCAAGTCAGGACAGGCTaGGGCGGGGACAGCTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RKMGRALVDLQERARAEWQVRTG*GGDSWG Trigger: CCCCCAGCTGTCCCCGCCTCAGCCTGTCCTGACTTG...CCACTCAGCTCTGGCTCTTTCCTGGAGGTCGACCAAGGCTCTCCCCATCTTCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR TCA 90 bp | AAACCAGGAAGATGGGGAGAGCCTTGGTCGACCTCCAGGAAAGAGCCAGAGCTGACAGGCGAGCGGCGCTaGGGACTGGGCGACTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KPGRWGEPWSTSRKEPELTGERR*GLGDWH Trigger: GTGCCAGTCGCCCAGTCCTCAGCGCCGCTCGCCTGT...CAGCTCTGGCTCTTTCCTGGAGGTCGACCAAGGCTCTCCCCATCTTCCTGGTTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR TCA 90 bp | GGAAAGACAGACATTTGGGAAGGGGCTCCCAGAGCTCTTGACACCTCCTCCTCTAGGCTCGGCGCGGGCTaGGCGGCCTGCCGTAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GKTDIWEGAPRALDTSSSRLGAG*AACRRA Trigger: AGCTCTACGGCAGGCCGCTCAGCCCGCGCCGAGCCT...AGAGGAGGAGGTGTCAAGAGCTCTGGGAGCCCCTTCCCAAATGTCTGTCTTTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR TCA 90 bp | AAGATGGGGAGAGCCTTGGTCGACCTCCAGGAAAGAGCCAGAGCTGAGTGGTGCGGGCCAGGCCAACCATaGCCCAAGGCAGGTCCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KMGRALVDLQERARAEWCGPGQP*PKAGPP Trigger: AGGGGGACCTGCCTTGGGTCATGGTTGGCCTGGCCC...GCACCACTCAGCTCTGGCTCTTTCCTGGAGGTCGACCAAGGCTCTCCCCATCTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | CGTGGTGGCTGGGCGGCTTGGCGTAGACACGCTCGGCCAGCGTCCTCTCCCCCGTACAGAGGGAAGCCATaGTCCTCTCCAAAATCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RGGWAAWRRHARPASSPPYRGKP*SSPKSV Trigger: CACTGATTTTGGAGAGGAGCATGGCTTCCCTCTGTA...CGGGGGAGAGGACGCTGGCCGAGCGTGTCTACGCCAAGCCGCCCAGCCACCACG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
||
| CDS-3UTR GCA 90 bp | GACAGTGGCGTTCACTGCCATCGGCTGGCCGAGGCCCCAGGGAGGCTCAAAGCGATCATCTCCCCGAGCTaGTCCTCCTGCTCCTTACTC | + |
|
Preference number: 4 (lower is better) Translates to: DSGVHCHRLAEAPGRLKAIISPS*SSCSLL Trigger: GAGTAAGGAGCAGGAGGAGCAGCTCGGGGAGATGAT...CGCTTTGAGCCTCCCTGGGGCCTCGGCCAGCCGATGGCAGTGAACGCCACTGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | CCATGTCCCCTCCCTGGGGAACACTCAGGGTACAATGACATGTCTCTGGAGTCCCCAGCTCCGAGTAGCTaGGGCGGCCCTGGAAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PCPLPGEHSGYNDMSLESPAPSS*GGPGSR Trigger: CCGGCTTCCAGGGCCGCCGCAGCTACTCGGAGCTGG...GGACTCCAGAGACATGTCATTGTACCCTGAGTGTTCCCCAGGGAGGGGACATGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | GGGCTGATGACACCTACCCAGCAAACACAGGCTGAGTCACACTTGGGCTCTGGGAAGCGCAGCGGATGGTaGCCGCTTCGGGACTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GLMTPTQQTQAESHLGSGKRSGW*PLRDWA Trigger: CGCCCAGTCCCGAAGCGGGCACCATCCGCTGCGCTT...CCCAGAGCCCAAGTGTGACTCAGCCTGTGTTTGCTGGGTAGGTGTCATCAGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | GCTGAGTCACACTTGGGCTCTGGGGAACCTGTGGTGTCAGGAGCTGCAGTGGGGTTGGAGGCCAGATCCTaGGCCCGGGTCTCCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: AESHLGSGEPVVSGAAVGLEARS*ARVSCS Trigger: ACTGCAGGAGACCCGGGCCCAGGATCTGGCCTCCAA...CCCCACTGCAGCTCCTGACACCACAGGTTCCCCAGAGCCCAAGTGTGACTCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | GTGGGGAGGGGGCCTGGAAGATTTGGATCAGAATGGCACATTCGATGGACAGTGGCGGCGCTGTGGGACTaGGGACGGGCAGGACGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: VGRGPGRFGSEWHIRWTVAALWD*GRAGRR Trigger: TCGCCGTCCTGCCCGTCCCCAGTCCCACAGCGCCGC...CACTGTCCATCGAATGTGCCATTCTGATCCAAATCTTCCAGGCCCCCTCCCCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | GAAGACGGCACACACATTGACTCGGTAGCTAGTGGAGGTATCTGGGGACCGCAAGCGGCGCTGTGGGACTaGGGACGGGCAGGACGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: EDGTHIDSVASGGIWGPQAALWD*GRAGRR Trigger: TCGCCGTCCTGCCCGTCCCCAGTCCCACAGCGCCGC...TTGCGGTCCCCAGATACCTCCACTAGCTACCGAGTCAATGTGTGTGCCGTCTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | AAACCAGGAAGATGGGGAGAGCCTTGGTCGACCTCCAGGAAAGAGCCAGAGCTGAGCGGCGCTGAGGACTaGGCGACTGGCACGACGGCG | + |
|
Preference number: 4 (lower is better) Translates to: KPGRWGEPWSTSRKEPELSGAED*ATGTTA Trigger: CGCCGTCGTGCCAGTCGCCCAGTCCTCAGCGCCGCT...CAGCTCTGGCTCTTTCCTGGAGGTCGACCAAGGCTCTCCCCATCTTCCTGGTTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | AAGATGGGGAGAGCCTTGGTCGACCTCCAGGAAAGAGCCAGAGCTGAGTGGTGCGGTGGCTGGGCGGCTTaGCGTAGACACGCTCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KMGRALVDLQERARAEWCGGWAA*RRHARP Trigger: TGGCCGAGCGTGTCTACGCCAAGCCGCCCAGCCACC...GCACCACTCAGCTCTGGCTCTTTCCTGGAGGTCGACCAAGGCTCTCCCCATCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | AAACCAGGAAGATGGGGAGAGCCTTGGTCGACCTCCAGGAAAGAGCCAGAGCTGAAGCCGGCCTTGGCGTaGTGGCTGGGCGGCTTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: KPGRWGEPWSTSRKEPELKPALA*WLGGLA Trigger: CGCCAAGCCGCCCAGCCACCACGCCAAGGCCGGCTT...CAGCTCTGGCTCTTTCCTGGAGGTCGACCAAGGCTCTCCCCATCTTCCTGGTTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGGGGGCCTGGAAGATTTGGATCAGAATGGCACATTCGATGGACAGTGGCGAAGCCGGCCTTGGCGTaGTGGCTGGGCGGCTTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GRGPGRFGSEWHIRWTVAKPALA*WLGGLA Trigger: CGCCAAGCCGCCCAGCCACCACGCCAAGGCCGGCTT...CGCCACTGTCCATCGAATGTGCCATTCTGATCCAAATCTTCCAGGCCCCCTCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | GGCTGGCAGACAGTTCCCTGGATTGAGGGTAATGGCCCAGGAGTCCCAGCCTCAGGGGCTTGGGAAGTGTaGCAGCCTCGGCCTGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GWQTVPWIEGNGPGVPASGAWEV*QPRPVA Trigger: GGCTACAGGCCGAGGCTGCCACACTTCCCAAGCCCC...TGAGGCTGGGACTCCTGGGCCATTACCCTCAATCCAGGGAACTGTCTGCCAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | TCACACTTGGGCTCTGGGGAACCTGTGGTGTCAGGAGCTGCAGTGGGGGTGATGCATAGGCGCGGGGCTTaGGAAGTGTGGCAGCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SHLGSGEPVVSGAAVGVMHRRGA*EVWQPR Trigger: CCGAGGCTGCCACACTTCCCAAGCCCCGCGCCTATG...CATCACCCCCACTGCAGCTCCTGACACCACAGGTTCCCCAGAGCCCAAGTGTGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | CAGACATTTGGGAAGGGGCTCCCAGAGCTCTTGACACCTCCTCCTCTCCCTCCCCATAGGCGCGGGGCTTaGGAAGTGTGGCAGCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: QTFGKGLPELLTPPPLPPHRRGA*EVWQPR Trigger: CCGAGGCTGCCACACTTCCCAAGCCCCGCGCCTATG...GGGAGGGAGAGGAGGAGGTGTCAAGAGCTCTGGGAGCCCCTTCCCAAATGTCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR TCA 90 bp | CCATGTCCCCTCCCTGGGGAACACTCAGGGTACAATGACATGTCTCTGGAGTCCCAAGTCAGGACAGGCTaGGGCGGGGACAGCTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PCPLPGEHSGYNDMSLESQVRTG*GGDSWG Trigger: CCCCCAGCTGTCCCCGCCTCAGCCTGTCCTGACTTG...GGACTCCAGAGACATGTCATTGTACCCTGAGTGTTCCCCAGGGAGGGGACATGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR TCA 90 bp | GGAAAGACAGACATTTGGGAAGGGGCTCCCAGAGCTCTTGACACCTCCTCCTCTACAGGCGAGCGGCGCTaGGGACTGGGCGACTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GKTDIWEGAPRALDTSSSTGERR*GLGDWH Trigger: GTGCCAGTCGCCCAGTCCTCAGCGCCGCTCGCCTGT...AGAGGAGGAGGTGTCAAGAGCTCTGGGAGCCCCTTCCCAAATGTCTGTCTTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR TCA 90 bp | CAGAAAGGCAGAGAGAGGTGGAGGGTATATCCTCCTCATCCCAGACCAGATCCCACAGGCGAGCGGCGCTaGGGACTGGGCGACTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QKGRERWRVYPPHPRPDPTGERR*GLGDWH Trigger: GTGCCAGTCGCCCAGTCCTCAGCGCCGCTCGCCTGT...GGGATCTGGTCTGGGATGAGGAGGATATACCCTCCACCTCTCTCTGCCTTTCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR TCA 90 bp | TCACACTTGGGCTCTGGGGAACCTGTGGTGTCAGGAGCTGCAGTGGGGGTGATGGAAGCCCGCACAGAATaGAGCGCAGCGGATGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SHLGSGEPVVSGAAVGVMEARTE*SAADGA Trigger: GGCACCATCCGCTGCGCTTCATTCTGTGCGGGCTTC...CATCACCCCCACTGCAGCTCCTGACACCACAGGTTCCCCAGAGCCCAAGTGTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | CAGAAAGGCAGAGAGAGGTGGAGGGTATATCCTCCTCATCCCAGACCAGATCCCCCAGCTCCGAGTAGCTaGGGCGGCCCTGGAAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: QKGRERWRVYPPHPRPDPPAPSS*GGPGSR Trigger: CCGGCTTCCAGGGCCGCCGCAGCTACTCGGAGCTGG...GGGATCTGGTCTGGGATGAGGAGGATATACCCTCCACCTCTCTCTGCCTTTCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | GACAGTGGCGTTCACTGCCATCGGCTGGCCGAGGCCCCAGGGAGGCTCAAAGCGTCTTCTTCAGATGGCTaGTTCTCAAAGCGCAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: DSGVHCHRLAEAPGRLKASSSDG*FSKRRR Trigger: CCGCCTGCGCTTTGAGAAGCAGCCATCTGAAGAAGA...CGCTTTGAGCCTCCCTGGGGCCTCGGCCAGCCGATGGCAGTGAACGCCACTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | AGGAAGATGGGGAGAGCCTTGGTCGACCTCCAGGAAAGAGCCAGAGCTGAGTGGGGCAGAGGGGGCAGCTaGGGATATCAGAGCCCACCG | + |
|
Preference number: 4 (lower is better) Translates to: RKMGRALVDLQERARAEWGRGGS*GYQSPP Trigger: CGGTGGGCTCTGATATCCGCAGCTGCCCCCTCTGCC...CCACTCAGCTCTGGCTCTTTCCTGGAGGTCGACCAAGGCTCTCCCCATCTTCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | CAGACATTTGGGAAGGGGCTCCCAGAGCTCTTGACACCTCCTCCTCTCCCTCCCTTGGAGGCCAGATCCTaGGCCCGGGTCTCCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QTFGKGLPELLTPPPLPPLEARS*ARVSCS Trigger: ACTGCAGGAGACCCGGGCCCAGGATCTGGCCTCCAA...GGGAGGGAGAGGAGGAGGTGTCAAGAGCTCTGGGAGCCCCTTCCCAAATGTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | GAAGACGGCACACACATTGACTCGGTAGCTAGTGGAGGTATCTGGGGACCGCAAAGCGGCGCTGAGGACTaGGCGACTGGCACGACGGCG | + |
|
Preference number: 4 (lower is better) Translates to: EDGTHIDSVASGGIWGPQSGAED*ATGTTA Trigger: CGCCGTCGTGCCAGTCGCCCAGTCCTCAGCGCCGCT...TTGCGGTCCCCAGATACCTCCACTAGCTACCGAGTCAATGTGTGTGCCGTCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAAGACGGCACACACATTGACTCGGTAGCTAGTGGAGGTATCTGGGGACCGGGTGGCTGGGCGGCTTaGCGTAGACACGCTCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: REDGTHIDSVASGGIWGPGGWAA*RRHARP Trigger: TGGCCGAGCGTGTCTACGCCAAGCCGCCCAGCCACC...CGGTCCCCAGATACCTCCACTAGCTACCGAGTCAATGTGTGTGCCGTCTTCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| CDS-3UTR CCA 90 bp | GACGGCACACACATTGACTCGGTAGCTAGTGGAGGTATCTGGGGACCGCAAGGGCCTTGGCGTGGTGGCTaGGCGGCTTGGCGTAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: DGTHIDSVASGGIWGPQGPWRGG*AAWRRH Trigger: GTGTCTACGCCAAGCCGCCCAGCCACCACGCCAAGG...CCCTTGCGGTCCCCAGATACCTCCACTAGCTACCGAGTCAATGTGTGTGCCGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | GGGCTGATGACACCTACCCAGCAAACACAGGCTGAGTCACACTTGGGCTCTGGGCCTTGGCGTGGTGGCTaGGCGGCTTGGCGTAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: GLMTPTQQTQAESHLGSGPWRGG*AAWRRH Trigger: GTGTCTACGCCAAGCCGCCCAGCCACCACGCCAAGG...CCCAGAGCCCAAGTGTGACTCAGCCTGTGTTTGCTGGGTAGGTGTCATCAGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | GTGGGGAGGGGGCCTGGAAGATTTGGATCAGAATGGCACATTCGATGGACAGTGCCTGGAAGCCGGCCTTaGCGTGGTGGCTGGGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VGRGPGRFGSEWHIRWTVPGSRP*RGGWAA Trigger: AGCCGCCCAGCCACCACGCCAAGGCCGGCTTCCAGG...CACTGTCCATCGAATGTGCCATTCTGATCCAAATCTTCCAGGCCCCCTCCCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| CDS-3UTR CCA 90 bp | AAGATGGGGAGAGCCTTGGTCGACCTCCAGGAAAGAGCCAGAGCTGAGTGGTGCGGGGCTTGGGAAGTGTaGCAGCCTCGGCCTGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KMGRALVDLQERARAEWCGAWEV*QPRPVA Trigger: GGCTACAGGCCGAGGCTGCCACACTTCCCAAGCCCC...GCACCACTCAGCTCTGGCTCTTTCCTGGAGGTCGACCAAGGCTCTCCCCATCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| CDS-3UTR CCA 90 bp | GCTGGCAGACAGTTCCCTGGATTGAGGGTAATGGCCCAGGAGTCCCAGCCTCAAGGGGCTTGGGAAGTGTaGCAGCCTCGGCCTGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: AGRQFPGLRVMAQESQPQGAWEV*QPRPVA Trigger: GGCTACAGGCCGAGGCTGCCACACTTCCCAAGCCCC...TTGAGGCTGGGACTCCTGGGCCATTACCCTCAATCCAGGGAACTGTCTGCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | GGCGTTCACTGCCATCGGCTGGCCGAGGCCCCAGGGAGGCTCAAAGCGAGGGGTCTCCTCTTCTTCAGATaGCTGCTTCTCAAAGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GVHCHRLAEAPGRLKARGLLFFR*LLLKAQ Trigger: CTGCGCTTTGAGAAGCAGCCATCTGAAGAAGAGGAG...ACCCCTCGCTTTGAGCCTCCCTGGGGCCTCGGCCAGCCGATGGCAGTGAACGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | TCACACTTGGGCTCTGGGGAACCTGTGGTGTCAGGAGCTGCAGTGGGGGTGATGATGAAGCGCAGCGGATaGTGCCCGCTTCGGGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: SHLGSGEPVVSGAAVGVMMKRSG*CPLRDW Trigger: CCAGTCCCGAAGCGGGCACCATCCGCTGCGCTTCAT...CATCACCCCCACTGCAGCTCCTGACACCACAGGTTCCCCAGAGCCCAAGTGTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | AGGAAGATGGGGAGAGCCTTGGTCGACCTCCAGGAAAGAGCCAGAGCTGAGTGGACAGGGAAACCCAGCTaGCAGAGGGGGCAGCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RKMGRALVDLQERARAEWTGKPS*QRGQLR Trigger: CCGCAGCTGCCCCCTCTGCCAGCTGGGTTTCCCTGT...CCACTCAGCTCTGGCTCTTTCCTGGAGGTCGACCAAGGCTCTCCCCATCTTCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | AAGATGGGGAGAGCCTTGGTCGACCTCCAGGAAAGAGCCAGAGCTGAGTGGTGCACAGGGAAACCCAGCTaGCAGAGGGGGCAGCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: KMGRALVDLQERARAEWCTGKPS*QRGQLR Trigger: CCGCAGCTGCCCCCTCTGCCAGCTGGGTTTCCCTGT...GCACCACTCAGCTCTGGCTCTTTCCTGGAGGTCGACCAAGGCTCTCCCCATCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR TCA 90 bp | GAAAGACAGACATTTGGGAAGGGGCTCCCAGAGCTCTTGACACCTCCTCCTCTCCAAGTCAGGACAGGCTaGGGCGGGGACAGCTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ERQTFGKGLPELLTPPPLQVRTG*GGDSWG Trigger: CCCCCAGCTGTCCCCGCCTCAGCCTGTCCTGACTTG...GAGAGGAGGAGGTGTCAAGAGCTCTGGGAGCCCCTTCCCAAATGTCTGTCTTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | CATCGGCTGGCCGAGGCCCCAGGGAGGCTCAAAGCGAGGGGTGGATTCATAGTGCCGAGCTGCTCCTCCTaGTCCTTACTCTTCTGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: HRLAEAPGRLKARGGFIVPSCSS*SLLFCN Trigger: GTTGCAGAAGAGTAAGGAGCAGGAGGAGCAGCTCGG...CACTATGAATCCACCCCTCGCTTTGAGCCTCCCTGGGGCCTCGGCCAGCCGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | AGCCTCAAGGCAGCCCCTTTGGGCTGGATCATCCAAGGCCTGCAGGGTCCTCCCAGGCCCTGCTGTTGCTaGAGCTGTTTCTCCAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: SLKAAPLGWIIQGLQGPPRPCCC*SCFSRP Trigger: TGGTCTGGAGAAACAGCTGCAGCAACAGCAGGGCCT...GGGAGGACCCTGCAGGCCTTGGATGATCCAGCCCAAAGGGGCTGCCTTGAGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | GGGCTGATGACACCTACCCAGCAAACACAGGCTGAGTCACACTTGGGCTCTGGGGCCTTTGGCCTGCGTTaGGGGCCTGTTCCTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLMTPTQQTQAESHLGSGAFGLR*GPVPAA Trigger: TGCTGCAGGAACAGGCCCGCAACGCAGGCCAAAGGC...CCCAGAGCCCAAGTGTGACTCAGCCTGTGTTTGCTGGGTAGGTGTCATCAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| CDS-3UTR GCA 90 bp | TGTGGGGAGGGGGCCTGGAAGATTTGGATCAGAATGGCACATTCGATGGACAGTCCAGCTCCGAGTAGCTaGGGCGGCCCTGGAAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: CGEGAWKIWIRMAHSMDSPAPSS*GGPGSR Trigger: CCGGCTTCCAGGGCCGCCGCAGCTACTCGGAGCTGG...ACTGTCCATCGAATGTGCCATTCTGATCCAAATCTTCCAGGCCCCCTCCCCACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| CDS-3UTR CCA 90 bp | GTGGGGAGGGGGCCTGGAAGATTTGGATCAGAATGGCACATTCGATGGACAGTGGGCGACGGCGGAGGGTaGCATTCTCCCTCTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VGRGPGRFGSEWHIRWTVGDGGG*HSPSPG Trigger: GCCTGGAGAGGGAGAATGCCACCCTCCGCCGTCGCC...CACTGTCCATCGAATGTGCCATTCTGATCCAAATCTTCCAGGCCCCCTCCCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | AAGATGGGGAGAGCCTTGGTCGACCTCCAGGAAAGAGCCAGAGCTGAGTGGTGCTTGGAGGCCAGATCCTaGGCCCGGGTCTCCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KMGRALVDLQERARAEWCLEARS*ARVSCS Trigger: ACTGCAGGAGACCCGGGCCCAGGATCTGGCCTCCAA...GCACCACTCAGCTCTGGCTCTTTCCTGGAGGTCGACCAAGGCTCTCCCCATCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGGGAGGGGGCCTGGAAGATTTGGATCAGAATGGCACATTCGATGGACAGTCCTGGAAGCCGGCCTTaGCGTGGTGGCTGGGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CGEGAWKIWIRMAHSMDSPGSRP*RGGWAA Trigger: AGCCGCCCAGCCACCACGCCAAGGCCGGCTTCCAGG...ACTGTCCATCGAATGTGCCATTCTGATCCAAATCTTCCAGGCCCCCTCCCCACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| CDS-3UTR CCA 90 bp | AGGAAGATGGGGAGAGCCTTGGTCGACCTCCAGGAAAGAGCCAGAGCTGAGTGGATGAAGCGCAGCGGATaGTGCCCGCTTCGGGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: RKMGRALVDLQERARAEWMKRSG*CPLRDW Trigger: CCAGTCCCGAAGCGGGCACCATCCGCTGCGCTTCAT...CCACTCAGCTCTGGCTCTTTCCTGGAGGTCGACCAAGGCTCTCCCCATCTTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| CDS-3UTR TCA 90 bp | CAGACATTTGGGAAGGGGCTCCCAGAGCTCTTGACACCTCCTCCTCTCCCTCCCGTCGTTGCTGCAGACTaGCCTTCTCCACCTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QTFGKGLPELLTPPPLPPVVAAD*PSPPPA Trigger: TGCTGGAGGTGGAGAAGGTCAGTCTGCAGCAACGAC...GGGAGGGAGAGGAGGAGGTGTCAAGAGCTCTGGGAGCCCCTTCCCAAATGTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| CDS-3UTR TCA 90 bp | GGAAAGACAGACATTTGGGAAGGGGCTCCCAGAGCTCTTGACACCTCCTCCTCTCCAGGCCAACCTGCATaGCCCAAGGCAGGTCCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GKTDIWEGAPRALDTSSSPGQPA*PKAGPP Trigger: AGGGGGACCTGCCTTGGGTCATGCAGGTTGGCCTGG...AGAGGAGGAGGTGTCAAGAGCTCTGGGAGCCCCTTCCCAAATGTCTGTCTTTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 |
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| CDS-3UTR TCA 90 bp | CCATGTCCCCTCCCTGGGGAACACTCAGGGTACAATGACATGTCTCTGGAGTCCGAAGCCCGCACAGAATaGAGCGCAGCGGATGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PCPLPGEHSGYNDMSLESEARTE*SAADGA Trigger: GGCACCATCCGCTGCGCTTCATTCTGTGCGGGCTTC...GGACTCCAGAGACATGTCATTGTACCCTGAGTGTTCCCCAGGGAGGGGACATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| CDS-3UTR TCA 90 bp | CATCGGCTGGCCGAGGCCCCAGGGAGGCTCAAAGCGAGGGGTGGATTCATAGTGTCTCCATCAGTAGGTTaGTGGATGGCCAGGACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HRLAEAPGRLKARGGFIVSPSVG*WMARTV Trigger: CACAGTCCTGGCCATCCATCAACCTACTGATGGAGA...CACTATGAATCCACCCCTCGCTTTGAGCCTCCCTGGGGCCTCGGCCAGCCGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| CDS-3UTR GCA 90 bp | CATCGGCTGGCCGAGGCCCCAGGGAGGCTCAAAGCGAGGGGTGGATTCATAGTGTGGTTGAGTCGTTGCTaGAGACTGACCTTCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: HRLAEAPGRLKARGGFIVWLSRC*RLTFST Trigger: GGTGGAGAAGGTCAGTCTGCAGCAACGACTCAACCA...CACTATGAATCCACCCCTCGCTTTGAGCCTCCCTGGGGCCTCGGCCAGCCGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| CDS-3UTR GCA 90 bp | GACAGTGGCGTTCACTGCCATCGGCTGGCCGAGGCCCCAGGGAGGCTCAAAGCGAATTGGTTGAGTCGTTaGTGCAGACTGACCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DSGVHCHRLAEAPGRLKANWLSR*CRLTFS Trigger: GGAGAAGGTCAGTCTGCAGCAACGACTCAACCAATT...CGCTTTGAGCCTCCCTGGGGCCTCGGCCAGCCGATGGCAGTGAACGCCACTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| CDS-3UTR GCA 90 bp | GCTGAGTCACACTTGGGCTCTGGGGAACCTGTGGTGTCAGGAGCTGCAGTGGGGCCGAGCTGCTCCTCCTaGTCCTTACTCTTCTGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: AESHLGSGEPVVSGAAVGPSCSS*SLLFCN Trigger: GTTGCAGAAGAGTAAGGAGCAGGAGGAGCAGCTCGG...CCCCACTGCAGCTCCTGACACCACAGGTTCCCCAGAGCCCAAGTGTGACTCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| CDS-3UTR GCA 90 bp | AAACCAGGAAGATGGGGAGAGCCTTGGTCGACCTCCAGGAAAGAGCCAGAGCTGTGGGCCCGGGTCTCCTaGAGTTGCTTCAGCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KPGRWGEPWSTSRKEPELWARVS*SCFSSP Trigger: GGGAGAGCTGAAGCAACTGCAGGAGACCCGGGCCCA...CAGCTCTGGCTCTTTCCTGGAGGTCGACCAAGGCTCTCCCCATCTTCCTGGTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| CDS-3UTR GCA 90 bp | GGGAGGGGGCCTGGAAGATTTGGATCAGAATGGCACATTCGATGGACAGTGGCGGCCTTTGGCCTGCGTTaGGGGCCTGTTCCTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GRGPGRFGSEWHIRWTVAAFGLR*GPVPAA Trigger: TGCTGCAGGAACAGGCCCGCAACGCAGGCCAAAGGC...CGCCACTGTCCATCGAATGTGCCATTCTGATCCAAATCTTCCAGGCCCCCTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| CDS-3UTR GCA 90 bp | CCATGTCCCCTCCCTGGGGAACACTCAGGGTACAATGACATGTCTCTGGAGTCCGCCTTTGGCCTGCGTTaGGGGCCTGTTCCTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PCPLPGEHSGYNDMSLESAFGLR*GPVPAA Trigger: TGCTGCAGGAACAGGCCCGCAACGCAGGCCAAAGGC...GGACTCCAGAGACATGTCATTGTACCCTGAGTGTTCCCCAGGGAGGGGACATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| CDS-3UTR GCA 90 bp | GTGGGGAGGGGGCCTGGAAGATTTGGATCAGAATGGCACATTCGATGGACAGTGGGCAGAGGGGGCAGCTaGGGATATCAGAGCCCACCG | + |
|
Preference number: 4 (lower is better) Translates to: VGRGPGRFGSEWHIRWTVGRGGS*GYQSPP Trigger: CGGTGGGCTCTGATATCCGCAGCTGCCCCCTCTGCC...CACTGTCCATCGAATGTGCCATTCTGATCCAAATCTTCCAGGCCCCCTCCCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| CDS-3UTR CCA 90 bp | CAGCTCCTCTGTCAGTTCTGTGTAGGCCAGCGCCAAGTTCACCCTCGGGTCCAGGGCCCCAAGGCCTCTTaGGTCAGGATGCTGATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QLLCQFCVGQRQVHPRVQGPKAS*VRMLMS Trigger: TGACATCAGCATCCTGACCCAAGAGGCCTTGGGGCC...CTGGACCCGAGGGTGAACTTGGCGCTGGCCTACACAGAACTGACAGAGGAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
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| CDS-3UTR CCA 90 bp | CCTCTCCCTCCCCTGAGCACTAGACTTCCTCTTGGAGACAACCCTGTTGAAGAAGGCGACGGCGGAGGGTaGCATTCTCCCTCTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PLPPLSTRLPLGDNPVEEGDGGG*HSPSPG Trigger: GCCTGGAGAGGGAGAATGCCACCCTCCGCCGTCGCC...TTCTTCAACAGGGTTGTCTCCAAGAGGAAGTCTAGTGCTCAGGGGAGGGAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| CDS-3UTR CCA 90 bp | CCATGTCCCCTCCCTGGGGAACACTCAGGGTACAATGACATGTCTCTGGAGTCCCTCTCGCATTCCGCCTaGAGTTGCTCCTCCCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PCPLPGEHSGYNDMSLESLSHSA*SCSSRS Trigger: GCTCCGGGAGGAGCAACTCCAGGCGGAATGCGAGAG...GGACTCCAGAGACATGTCATTGTACCCTGAGTGTTCCCCAGGGAGGGGACATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | AAACCAGGAAGATGGGGAGAGCCTTGGTCGACCTCCAGGAAAGAGCCAGAGCTGCTCTCGCATTCCGCCTaGAGTTGCTCCTCCCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KPGRWGEPWSTSRKEPELLSHSA*SCSSRS Trigger: GCTCCGGGAGGAGCAACTCCAGGCGGAATGCGAGAG...CAGCTCTGGCTCTTTCCTGGAGGTCGACCAAGGCTCTCCCCATCTTCCTGGTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | GGGCTGATGACACCTACCCAGCAAACACAGGCTGAGTCACACTTGGGCTCTGGGCACATTCCGACTGGTTaGAGGCCAGATCCTGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GLMTPTQQTQAESHLGSGHIPTG*RPDPGP Trigger: GGGCCCAGGATCTGGCCTCCAACCAGTCGGAATGTG...CCCAGAGCCCAAGTGTGACTCAGCCTGTGTTTGCTGGGTAGGTGTCATCAGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | GGAAAGACAGACATTTGGGAAGGGGCTCCCAGAGCTCTTGACACCTCCTCCTCTCCTTGGCGTGGTGGCTaGGCGGCTTGGCGTAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: GKTDIWEGAPRALDTSSSPWRGG*AAWRRH Trigger: GTGTCTACGCCAAGCCGCCCAGCCACCACGCCAAGG...AGAGGAGGAGGTGTCAAGAGCTCTGGGAGCCCCTTCCCAAATGTCTGTCTTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | GAAAGACAGACATTTGGGAAGGGGCTCCCAGAGCTCTTGACACCTCCTCCTCTCCATAGGCGCGGGGCTTaGGAAGTGTGGCAGCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: ERQTFGKGLPELLTPPPLHRRGA*EVWQPR Trigger: CCGAGGCTGCCACACTTCCCAAGCCCCGCGCCTATG...GAGAGGAGGAGGTGTCAAGAGCTCTGGGAGCCCCTTCCCAAATGTCTGTCTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAAGACGGCACACACATTGACTCGGTAGCTAGTGGAGGTATCTGGGGACCGATGAAGCGCAGCGGATaGTGCCCGCTTCGGGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: REDGTHIDSVASGGIWGPMKRSG*CPLRDW Trigger: CCAGTCCCGAAGCGGGCACCATCCGCTGCGCTTCAT...CGGTCCCCAGATACCTCCACTAGCTACCGAGTCAATGTGTGTGCCGTCTTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | GTGGGGAGGGGGCCTGGAAGATTTGGATCAGAATGGCACATTCGATGGACAGTGACAGGGAAACCCAGCTaGCAGAGGGGGCAGCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VGRGPGRFGSEWHIRWTVTGKPS*QRGQLR Trigger: CCGCAGCTGCCCCCTCTGCCAGCTGGGTTTCCCTGT...CACTGTCCATCGAATGTGCCATTCTGATCCAAATCTTCCAGGCCCCCTCCCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | GAAGACGGCACACACATTGACTCGGTAGCTAGTGGAGGTATCTGGGGACCGCAAACAGGGAAACCCAGCTaGCAGAGGGGGCAGCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: EDGTHIDSVASGGIWGPQTGKPS*QRGQLR Trigger: CCGCAGCTGCCCCCTCTGCCAGCTGGGTTTCCCTGT...TTGCGGTCCCCAGATACCTCCACTAGCTACCGAGTCAATGTGTGTGCCGTCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| 3UTR CAA 72 bp | ACTCTCTTGACCCAAGCCATGTCACATTCCGACTGGTaGGAGGCCAGATCCTGGGCCCGGGTCTCCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TLLTQAMSHSDW*EARSWARVSCS Trigger: ACTGCAGGAGACCCGGGCCCAGGATCTGGCCTCCAACCAGTCGGAATGTGACATGGCTTGGGTCAAGAGAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
||
| CDS-3UTR TCA 90 bp | TGCATGACCCAAGGCAGGTCCCCCTCTCAGAGCCAGATAGTGCAGGTCCAAGTCGTCGTTGCTGCAGACTaGCCTTCTCCACCTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CMTQGRSPSQSQIVQVQVVVAAD*PSPPPA Trigger: TGCTGGAGGTGGAGAAGGTCAGTCTGCAGCAACGAC...GACTTGGACCTGCACTATCTGGCTCTGAGAGGGGGACCTGCCTTGGGTCATGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
||
| CDS-3UTR TCA 90 bp | GAAAGACAGACATTTGGGAAGGGGCTCCCAGAGCTCTTGACACCTCCTCCTCTCGAAGCCCGCACAGAATaGAGCGCAGCGGATGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ERQTFGKGLPELLTPPPLEARTE*SAADGA Trigger: GGCACCATCCGCTGCGCTTCATTCTGTGCGGGCTTC...GAGAGGAGGAGGTGTCAAGAGCTCTGGGAGCCCCTTCCCAAATGTCTGTCTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | AAGATGGGGAGAGCCTTGGTCGACCTCCAGGAAAGAGCCAGAGCTGAGTGGTGCCGGAGGCCCTGCTGTTaGTGCAGCTGTTTCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KMGRALVDLQERARAEWCRRPCC*CSCFSR Trigger: TCTGGAGAAACAGCTGCAGCAACAGCAGGGCCTCCG...GCACCACTCAGCTCTGGCTCTTTCCTGGAGGTCGACCAAGGCTCTCCCCATCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | GGGCTGATGACACCTACCCAGCAAACACAGGCTGAGTCACACTTGGGCTCTGGGCGGAGGCCCTGCTGTTaGTGCAGCTGTTTCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GLMTPTQQTQAESHLGSGRRPCC*CSCFSR Trigger: TCTGGAGAAACAGCTGCAGCAACAGCAGGGCCTCCG...CCCAGAGCCCAAGTGTGACTCAGCCTGTGTTTGCTGGGTAGGTGTCATCAGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | CAGAAAGGCAGAGAGAGGTGGAGGGTATATCCTCCTCATCCCAGACCAGATCCCTGGGCCCGGGTCTCCTaGAGTTGCTTCAGCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QKGRERWRVYPPHPRPDPWARVS*SCFSSP Trigger: GGGAGAGCTGAAGCAACTGCAGGAGACCCGGGCCCA...GGGATCTGGTCTGGGATGAGGAGGATATACCCTCCACCTCTCTCTGCCTTTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | AGGAAGATGGGGAGAGCCTTGGTCGACCTCCAGGAAAGAGCCAGAGCTGAGTGGCTCAAGATCCTCCCCTaGAGGGAACTCAGCTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: RKMGRALVDLQERARAEWLKILP*RELSSR Trigger: TCGGGAGCTGAGTTCCCTGCAGGGGAGGATCTTGAG...CCACTCAGCTCTGGCTCTTTCCTGGAGGTCGACCAAGGCTCTCCCCATCTTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | GAAAGACAGACATTTGGGAAGGGGCTCCCAGAGCTCTTGACACCTCCTCCTCTCGCCTTTGGCCTGCGTTaGGGGCCTGTTCCTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ERQTFGKGLPELLTPPPLAFGLR*GPVPAA Trigger: TGCTGCAGGAACAGGCCCGCAACGCAGGCCAAAGGC...GAGAGGAGGAGGTGTCAAGAGCTCTGGGAGCCCCTTCCCAAATGTCTGTCTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGCAGACAGTTCCCTGGATTGAGGGTAATGGCCCAGGAGTCCCAGCCTCAAGGCCCCAAGGCCTCTTaGGTCAGGATGCTGATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AGRQFPGLRVMAQESQPQGPKAS*VRMLMS Trigger: TGACATCAGCATCCTGACCCAAGAGGCCTTGGGGCC...TTGAGGCTGGGACTCCTGGGCCATTACCCTCAATCCAGGGAACTGTCTGCCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | AGGAAGATGGGGAGAGCCTTGGTCGACCTCCAGGAAAGAGCCAGAGCTGAGTGGGGCCCCAAGGCCTCTTaGGTCAGGATGCTGATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RKMGRALVDLQERARAEWGPKAS*VRMLMS Trigger: TGACATCAGCATCCTGACCCAAGAGGCCTTGGGGCC...CCACTCAGCTCTGGCTCTTTCCTGGAGGTCGACCAAGGCTCTCCCCATCTTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGGCCGGGGAGTGACGTTGCGACAGCGGTGAGTGCCTTTGGCCTGCGTTGCAACTCGTGTTGGAATTaGTTGAGTCGTTGCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QGPGSDVATAVSAFGLRCNSCWN*LSRCCR Trigger: TCTGCAGCAACGACTCAACCAATTCCAACACGAGTT...GCAACGCAGGCCAAAGGCACTCACCGCTGTCGCAACGTCACTCCCCGGCCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
||
| CDS-3UTR CCA 90 bp | CAGAAAGGCAGAGAGAGGTGGAGGGTATATCCTCCTCATCCCAGACCAGATCCCCTCTCGCATTCCGCCTaGAGTTGCTCCTCCCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QKGRERWRVYPPHPRPDPLSHSA*SCSSRS Trigger: GCTCCGGGAGGAGCAACTCCAGGCGGAATGCGAGAG...GGGATCTGGTCTGGGATGAGGAGGATATACCCTCCACCTCTCTCTGCCTTTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | GCTGAGTCACACTTGGGCTCTGGGGAACCTGTGGTGTCAGGAGCTGCAGTGGGGATGTCACATTCCGACTaGTTGGAGGCCAGATCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AESHLGSGEPVVSGAAVGMSHSD*LEARSW Trigger: CCAGGATCTGGCCTCCAACCAGTCGGAATGTGACAT...CCCCACTGCAGCTCCTGACACCACAGGTTCCCCAGAGCCCAAGTGTGACTCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGGGAGGGGGCCTGGAAGATTTGGATCAGAATGGCACATTCGATGGACAGTGGGGCTTGGGAAGTGTaGCAGCCTCGGCCTGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CGEGAWKIWIRMAHSMDSGAWEV*QPRPVA Trigger: GGCTACAGGCCGAGGCTGCCACACTTCCCAAGCCCC...ACTGTCCATCGAATGTGCCATTCTGATCCAAATCTTCCAGGCCCCCTCCCCACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | CATCGGCTGGCCGAGGCCCCAGGGAGGCTCAAAGCGAGGGGTGGATTCATAGTGCTCCTCTTCTTCAGATaGCTGCTTCTCAAAGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HRLAEAPGRLKARGGFIVLLFFR*LLLKAQ Trigger: CTGCGCTTTGAGAAGCAGCCATCTGAAGAAGAGGAG...CACTATGAATCCACCCCTCGCTTTGAGCCTCCCTGGGGCCTCGGCCAGCCGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR TCA 90 bp | CATCGGCTGGCCGAGGCCCCAGGGAGGCTCAAAGCGAGGGGTGGATTCATAGTGCTTGGGTCAGGATGCTaGTGTCATCTTCAAACATGG | + |
|
Preference number: 4 (lower is better) Translates to: HRLAEAPGRLKARGGFIVLGSGC*CHLQTW Trigger: CCATGTTTGAAGATGACATCAGCATCCTGACCCAAG...CACTATGAATCCACCCCTCGCTTTGAGCCTCCCTGGGGCCTCGGCCAGCCGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR TCA 90 bp | AAGATGGGGAGAGCCTTGGTCGACCTCCAGGAAAGAGCCAGAGCTGAGTGGTGCGCAGGGAGCCATCCTTaGGTTCATACAGAGGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KMGRALVDLQERARAEWCAGSHP*VHTEGS Trigger: GCTTCCCTCTGTATGAACTCAAGGATGGCTCCCTGC...GCACCACTCAGCTCTGGCTCTTTCCTGGAGGTCGACCAAGGCTCTCCCCATCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR TCA 90 bp | AGGGAAGACGGCACACACATTGACTCGGTAGCTAGTGGAGGTATCTGGGGACCGGTCGTTGCTGCAGACTaGCCTTCTCCACCTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: REDGTHIDSVASGGIWGPVVAAD*PSPPPA Trigger: TGCTGGAGGTGGAGAAGGTCAGTCTGCAGCAACGAC...CGGTCCCCAGATACCTCCACTAGCTACCGAGTCAATGTGTGTGCCGTCTTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | AGCCTCAAGGCAGCCCCTTTGGGCTGGATCATCCAAGGCCTGCAGGGTCCTCCCTACAGAGGGAAGCCATaGTCCTCTCCAAAATCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLKAAPLGWIIQGLQGPPYRGKP*SSPKSV Trigger: CACTGATTTTGGAGAGGAGCATGGCTTCCCTCTGTA...GGGAGGACCCTGCAGGCCTTGGATGATCCAGCCCAAAGGGGCTGCCTTGAGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | GACGGCACACACATTGACTCGGTAGCTAGTGGAGGTATCTGGGGACCGCAAGGGATCATCTCCCCGAGCTaGTCCTCCTGCTCCTTACTC | + |
|
Preference number: 4 (lower is better) Translates to: DGTHIDSVASGGIWGPQGIISPS*SSCSLL Trigger: GAGTAAGGAGCAGGAGGAGCAGCTCGGGGAGATGAT...CCCTTGCGGTCCCCAGATACCTCCACTAGCTACCGAGTCAATGTGTGTGCCGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | CCAGACCACAGATCTGCCGTAGATGAGTCTCTACCAGGGCCCGACGACAAGTGGATCATCTCCCCGAGCTaGTCCTCCTGCTCCTTACTC | + |
|
Preference number: 4 (lower is better) Translates to: PDHRSAVDESLPGPDDKWIISPS*SSCSLL Trigger: GAGTAAGGAGCAGGAGGAGCAGCTCGGGGAGATGAT...CCACTTGTCGTCGGGCCCTGGTAGAGACTCATCTACGGCAGATCTGTGGTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
||
| CDS-3UTR GCA 90 bp | AAGATGGGGAGAGCCTTGGTCGACCTCCAGGAAAGAGCCAGAGCTGAGTGGTGCAGGCCCTGCTGTTGCTaGAGCTGTTTCTCCAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: KMGRALVDLQERARAEWCRPCCC*SCFSRP Trigger: TGGTCTGGAGAAACAGCTGCAGCAACAGCAGGGCCT...GCACCACTCAGCTCTGGCTCTTTCCTGGAGGTCGACCAAGGCTCTCCCCATCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | AGGAAGATGGGGAGAGCCTTGGTCGACCTCCAGGAAAGAGCCAGAGCTGAGTGGAGGCCCTGCTGTTGCTaGAGCTGTTTCTCCAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: RKMGRALVDLQERARAEWRPCCC*SCFSRP Trigger: TGGTCTGGAGAAACAGCTGCAGCAACAGCAGGGCCT...CCACTCAGCTCTGGCTCTTTCCTGGAGGTCGACCAAGGCTCTCCCCATCTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | AAACCAGGAAGATGGGGAGAGCCTTGGTCGACCTCCAGGAAAGAGCCAGAGCTGCGGAGGCCCTGCTGTTaGTGCAGCTGTTTCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KPGRWGEPWSTSRKEPELRRPCC*CSCFSR Trigger: TCTGGAGAAACAGCTGCAGCAACAGCAGGGCCTCCG...CAGCTCTGGCTCTTTCCTGGAGGTCGACCAAGGCTCTCCCCATCTTCCTGGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | AAATTAATCTCCACAGCACCCTGGGCCCAATCTCAGGTTCTGGCCTGGAAGGCATGGGCCCGGGTCTCCTaGAGTTGCTTCAGCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KLISTAPWAQSQVLAWKAWARVS*SCFSSP Trigger: GGGAGAGCTGAAGCAACTGCAGGAGACCCGGGCCCA...TGCCTTCCAGGCCAGAACCTGAGATTGGGCCCAGGGTGCTGTGGAGATTAATTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | GATGGACAGTGGCGTTCACTGCCATCGGCTGGCCGAGGCCCCAGGGAGGCTCAATTCTGCAACTCGTGTTaGAATTGGTTGAGTCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: DGQWRSLPSAGRGPREAQFCNSC*NWLSRC Trigger: GCAACGACTCAACCAATTCCAACACGAGTTGCAGAA...TTGAGCCTCCCTGGGGCCTCGGCCAGCCGATGGCAGTGAACGCCACTGTCCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | CCTCTCCCTCCCCTGAGCACTAGACTTCCTCTTGGAGACAACCCTGTTGAAGAACTCTCGCATTCCGCCTaGAGTTGCTCCTCCCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PLPPLSTRLPLGDNPVEELSHSA*SCSSRS Trigger: GCTCCGGGAGGAGCAACTCCAGGCGGAATGCGAGAG...TTCTTCAACAGGGTTGTCTCCAAGAGGAAGTCTAGTGCTCAGGGGAGGGAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR TCA 90 bp | CCTCTCCCTCCCCTGAGCACTAGACTTCCTCTTGGAGACAACCCTGTTGAAGAACAGATCTGCCGTAGATaGGTCTCTACCAGGGCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PLPPLSTRLPLGDNPVEEQICRR*VSTRAR Trigger: GCGGGCCCTGGTAGAGACTCATCTACGGCAGATCTG...TTCTTCAACAGGGTTGTCTCCAAGAGGAAGTCTAGTGCTCAGGGGAGGGAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR TCA 90 bp | GCTGGCAGACAGTTCCCTGGATTGAGGGTAATGGCCCAGGAGTCCCAGCCTCAATCTCCATCAGTAGGTTaGTGGATGGCCAGGACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AGRQFPGLRVMAQESQPQSPSVG*WMARTV Trigger: CACAGTCCTGGCCATCCATCAACCTACTGATGGAGA...TTGAGGCTGGGACTCCTGGGCCATTACCCTCAATCCAGGGAACTGTCTGCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | GACGGCACACACATTGACTCGGTAGCTAGTGGAGGTATCTGGGGACCGCAAGGGTGGTTGAGTCGTTGCTaGAGACTGACCTTCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: DGTHIDSVASGGIWGPQGWLSRC*RLTFST Trigger: GGTGGAGAAGGTCAGTCTGCAGCAACGACTCAACCA...CCCTTGCGGTCCCCAGATACCTCCACTAGCTACCGAGTCAATGTGTGTGCCGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | CCAGACCACAGATCTGCCGTAGATGAGTCTCTACCAGGGCCCGACGACAAGTGGTGGTTGAGTCGTTGCTaGAGACTGACCTTCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: PDHRSAVDESLPGPDDKWWLSRC*RLTFST Trigger: GGTGGAGAAGGTCAGTCTGCAGCAACGACTCAACCA...CCACTTGTCGTCGGGCCCTGGTAGAGACTCATCTACGGCAGATCTGTGGTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
||
| CDS-3UTR GCA 90 bp | AGGAAGATGGGGAGAGCCTTGGTCGACCTCCAGGAAAGAGCCAGAGCTGAGTGGTGGTTGAGTCGTTGCTaGAGACTGACCTTCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: RKMGRALVDLQERARAEWWLSRC*RLTFST Trigger: GGTGGAGAAGGTCAGTCTGCAGCAACGACTCAACCA...CCACTCAGCTCTGGCTCTTTCCTGGAGGTCGACCAAGGCTCTCCCCATCTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | GGGCTGATGACACCTACCCAGCAAACACAGGCTGAGTCACACTTGGGCTCTGGGTGGTTGAGTCGTTGCTaGAGACTGACCTTCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: GLMTPTQQTQAESHLGSGWLSRC*RLTFST Trigger: GGTGGAGAAGGTCAGTCTGCAGCAACGACTCAACCA...CCCAGAGCCCAAGTGTGACTCAGCCTGTGTTTGCTGGGTAGGTGTCATCAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | AGGGAAGACGGCACACACATTGACTCGGTAGCTAGTGGAGGTATCTGGGGACCGCCGAGCTGCTCCTCCTaGTCCTTACTCTTCTGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: REDGTHIDSVASGGIWGPPSCSS*SLLFCN Trigger: GTTGCAGAAGAGTAAGGAGCAGGAGGAGCAGCTCGG...CGGTCCCCAGATACCTCCACTAGCTACCGAGTCAATGTGTGTGCCGTCTTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | CCATGTCCCCTCCCTGGGGAACACTCAGGGTACAATGACATGTCTCTGGAGTCCATCATCTCCCCGAGCTaGTCCTCCTGCTCCTTACTC | + |
|
Preference number: 4 (lower is better) Translates to: PCPLPGEHSGYNDMSLESIISPS*SSCSLL Trigger: GAGTAAGGAGCAGGAGGAGCAGCTCGGGGAGATGAT...GGACTCCAGAGACATGTCATTGTACCCTGAGTGTTCCCCAGGGAGGGGACATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | CTAGACTTCCTCTTGGAGACAACCCTGTTGAAGAACAGAAAGGCAGAGAGAGGTAAGCGCAGCGGATGGTaGCCGCTTCGGGACTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LDFLLETTLLKNRKAERGKRSGW*PLRDWA Trigger: CGCCCAGTCCCGAAGCGGGCACCATCCGCTGCGCTT...ACCTCTCTCTGCCTTTCTGTTCTTCAACAGGGTTGTCTCCAAGAGGAAGTCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | AAATTAATCTCCACAGCACCCTGGGCCCAATCTCAGGTTCTGGCCTGGAAGGCACACATTCCGACTGGTTaGAGGCCAGATCCTGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KLISTAPWAQSQVLAWKAHIPTG*RPDPGP Trigger: GGGCCCAGGATCTGGCCTCCAACCAGTCGGAATGTG...TGCCTTCCAGGCCAGAACCTGAGATTGGGCCCAGGGTGCTGTGGAGATTAATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | AGGAAGATGGGGAGAGCCTTGGTCGACCTCCAGGAAAGAGCCAGAGCTGAGTGGATGTCACATTCCGACTaGTTGGAGGCCAGATCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RKMGRALVDLQERARAEWMSHSD*LEARSW Trigger: CCAGGATCTGGCCTCCAACCAGTCGGAATGTGACAT...CCACTCAGCTCTGGCTCTTTCCTGGAGGTCGACCAAGGCTCTCCCCATCTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | TGGGTGGGTAGGTATGGGAAGGGGGTTAGCTCTTTTGAAATTAATCTCCACAGCGGTGGCTGGGCGGCTTaGCGTAGACACGCTCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: WVGRYGKGVSSFEINLHSGGWAA*RRHARP Trigger: TGGCCGAGCGTGTCTACGCCAAGCCGCCCAGCCACC...GCTGTGGAGATTAATTTCAAAAGAGCTAACCCCCTTCCCATACCTACCCACCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| 3UTR CAA 72 bp | ATTACCCAGGCTGAGGGAAGCAGTACACTACTCACGTaGATGGATGGCCAGGACTGTGCGTGCTCAGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ITQAEGSSTLLT*MDGQDCACSAW Trigger: CCACGCTGAGCACGCACAGTCCTGGCCATCCATCAACGTGAGTAGTGTACTGCTTCCCTCAGCCTGGGTAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
||
| CDS-3UTR TCA 90 bp | GAAAGACAGACATTTGGGAAGGGGCTCCCAGAGCTCTTGACACCTCCTCCTCTCGCAGGGAGCCATCCTTaGGTTCATACAGAGGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ERQTFGKGLPELLTPPPLAGSHP*VHTEGS Trigger: GCTTCCCTCTGTATGAACTCAAGGATGGCTCCCTGC...GAGAGGAGGAGGTGTCAAGAGCTCTGGGAGCCCCTTCCCAAATGTCTGTCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR TCA 90 bp | AACAGAAAGGCAGAGAGAGGTGGAGGGTATATCCTCCTCATCCCAGACCAGATCCAGATCTGCCGTAGATaGGTCTCTACCAGGGCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: NRKAERGGGYILLIPDQIQICRR*VSTRAR Trigger: GCGGGCCCTGGTAGAGACTCATCTACGGCAGATCTG...GATCTGGTCTGGGATGAGGAGGATATACCCTCCACCTCTCTCTGCCTTTCTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR TCA 90 bp | AAACCAGGAAGATGGGGAGAGCCTTGGTCGACCTCCAGGAAAGAGCCAGAGCTGTCTCCATCAGTAGGTTaGTGGATGGCCAGGACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KPGRWGEPWSTSRKEPELSPSVG*WMARTV Trigger: CACAGTCCTGGCCATCCATCAACCTACTGATGGAGA...CAGCTCTGGCTCTTTCCTGGAGGTCGACCAAGGCTCTCCCCATCTTCCTGGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | GTGGGGAGGGGGCCTGGAAGATTTGGATCAGAATGGCACATTCGATGGACAGTGCCGAGCTGCTCCTCCTaGTCCTTACTCTTCTGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: VGRGPGRFGSEWHIRWTVPSCSS*SLLFCN Trigger: GTTGCAGAAGAGTAAGGAGCAGGAGGAGCAGCTCGG...CACTGTCCATCGAATGTGCCATTCTGATCCAAATCTTCCAGGCCCCCTCCCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | CAGAAAGGCAGAGAGAGGTGGAGGGTATATCCTCCTCATCCCAGACCAGATCCCATCATCTCCCCGAGCTaGTCCTCCTGCTCCTTACTC | + |
|
Preference number: 4 (lower is better) Translates to: QKGRERWRVYPPHPRPDPIISPS*SSCSLL Trigger: GAGTAAGGAGCAGGAGGAGCAGCTCGGGGAGATGAT...GGGATCTGGTCTGGGATGAGGAGGATATACCCTCCACCTCTCTCTGCCTTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | AGGGGGCCTGGAAGATTTGGATCAGAATGGCACATTCGATGGACAGTGGCGTTCCGGAGGCCCTGCTGTTaGTGCAGCTGTTTCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RGPGRFGSEWHIRWTVAFRRPCC*CSCFSR Trigger: TCTGGAGAAACAGCTGCAGCAACAGCAGGGCCTCCG...GAACGCCACTGTCCATCGAATGTGCCATTCTGATCCAAATCTTCCAGGCCCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | AGGGGGCCTGGAAGATTTGGATCAGAATGGCACATTCGATGGACAGTGGCGTTCCTCAAGATCCTCCCCTaGAGGGAACTCAGCTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: RGPGRFGSEWHIRWTVAFLKILP*RELSSR Trigger: TCGGGAGCTGAGTTCCCTGCAGGGGAGGATCTTGAG...GAACGCCACTGTCCATCGAATGTGCCATTCTGATCCAAATCTTCCAGGCCCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | CCTCTCCCTCCCCTGAGCACTAGACTTCCTCTTGGAGACAACCCTGTTGAAGAACTCAAGATCCTCCCCTaGAGGGAACTCAGCTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: PLPPLSTRLPLGDNPVEELKILP*RELSSR Trigger: TCGGGAGCTGAGTTCCCTGCAGGGGAGGATCTTGAG...TTCTTCAACAGGGTTGTCTCCAAGAGGAAGTCTAGTGCTCAGGGGAGGGAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGGGAGGGGGCCTGGAAGATTTGGATCAGAATGGCACATTCGATGGACAGTCTCAAGATCCTCCCCTaGAGGGAACTCAGCTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: CGEGAWKIWIRMAHSMDSLKILP*RELSSR Trigger: TCGGGAGCTGAGTTCCCTGCAGGGGAGGATCTTGAG...ACTGTCCATCGAATGTGCCATTCTGATCCAAATCTTCCAGGCCCCCTCCCCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | TGGGTGGGTAGGTATGGGAAGGGGGTTAGCTCTTTTGAAATTAATCTCCACAGCGGCAGAGGGGGCAGCTaGGGATATCAGAGCCCACCG | + |
|
Preference number: 4 (lower is better) Translates to: WVGRYGKGVSSFEINLHSGRGGS*GYQSPP Trigger: CGGTGGGCTCTGATATCCGCAGCTGCCCCCTCTGCC...GCTGTGGAGATTAATTTCAAAAGAGCTAACCCCCTTCCCATACCTACCCACCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAAGACGGCACACACATTGACTCGGTAGCTAGTGGAGGTATCTGGGGACCGATGTCACATTCCGACTaGTTGGAGGCCAGATCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: REDGTHIDSVASGGIWGPMSHSD*LEARSW Trigger: CCAGGATCTGGCCTCCAACCAGTCGGAATGTGACAT...CGGTCCCCAGATACCTCCACTAGCTACCGAGTCAATGTGTGTGCCGTCTTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | GACGGCACACACATTGACTCGGTAGCTAGTGGAGGTATCTGGGGACCGCAAGGGGATGAGAGCATCATCTaGGTACCCAACAGGGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: DGTHIDSVASGGIWGPQGDESII*VPNRET Trigger: GGTTTCCCTGTTGGGTACCCAGATGATGCTCTCATC...CCCTTGCGGTCCCCAGATACCTCCACTAGCTACCGAGTCAATGTGTGTGCCGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGCAGACAGTTCCCTGGATTGAGGGTAATGGCCCAGGAGTCCCAGCCTCAAGATGAGAGCATCATCTaGGTACCCAACAGGGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: AGRQFPGLRVMAQESQPQDESII*VPNRET Trigger: GGTTTCCCTGTTGGGTACCCAGATGATGCTCTCATC...TTGAGGCTGGGACTCCTGGGCCATTACCCTCAATCCAGGGAACTGTCTGCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR TCA 90 bp | TGGGTGGGTAGGTATGGGAAGGGGGTTAGCTCTTTTGAAATTAATCTCCACAGCGAAGCCCGCACAGAATaGAGCGCAGCGGATGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: WVGRYGKGVSSFEINLHSEARTE*SAADGA Trigger: GGCACCATCCGCTGCGCTTCATTCTGTGCGGGCTTC...GCTGTGGAGATTAATTTCAAAAGAGCTAACCCCCTTCCCATACCTACCCACCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | AAGATGGGGAGAGCCTTGGTCGACCTCCAGGAAAGAGCCAGAGCTGAGTGGTGCTACAGAGGGAAGCCATaGTCCTCTCCAAAATCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KMGRALVDLQERARAEWCYRGKP*SSPKSV Trigger: CACTGATTTTGGAGAGGAGCATGGCTTCCCTCTGTA...GCACCACTCAGCTCTGGCTCTTTCCTGGAGGTCGACCAAGGCTCTCCCCATCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGCAGACAGTTCCCTGGATTGAGGGTAATGGCCCAGGAGTCCCAGCCTCAATACAGAGGGAAGCCATaGTCCTCTCCAAAATCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: AGRQFPGLRVMAQESQPQYRGKP*SSPKSV Trigger: CACTGATTTTGGAGAGGAGCATGGCTTCCCTCTGTA...TTGAGGCTGGGACTCCTGGGCCATTACCCTCAATCCAGGGAACTGTCTGCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | CAGTACACTACTCACGTTGATGGATGGCCAGGACTGTGCGTGCTCAGCGTGGGCAATTGGTTGAGTCGTTaGTGCAGACTGACCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QYTTHVDGWPGLCVLSVGNWLSR*CRLTFS Trigger: GGAGAAGGTCAGTCTGCAGCAACGACTCAACCAATT...GCCCACGCTGAGCACGCACAGTCCTGGCCATCCATCAACGTGAGTAGTGTACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
||
| CDS-3UTR GCA 90 bp | AAGATGGGGAGAGCCTTGGTCGACCTCCAGGAAAGAGCCAGAGCTGAGTGGTGCAATTGGTTGAGTCGTTaGTGCAGACTGACCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KMGRALVDLQERARAEWCNWLSR*CRLTFS Trigger: GGAGAAGGTCAGTCTGCAGCAACGACTCAACCAATT...GCACCACTCAGCTCTGGCTCTTTCCTGGAGGTCGACCAAGGCTCTCCCCATCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | CAGAAAGGCAGAGAGAGGTGGAGGGTATATCCTCCTCATCCCAGACCAGATCCCTCTTCTTCAGATGGCTaGTTCTCAAAGCGCAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: QKGRERWRVYPPHPRPDPSSSDG*FSKRRR Trigger: CCGCCTGCGCTTTGAGAAGCAGCCATCTGAAGAAGA...GGGATCTGGTCTGGGATGAGGAGGATATACCCTCCACCTCTCTCTGCCTTTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | GGAAAGACAGACATTTGGGAAGGGGCTCCCAGAGCTCTTGACACCTCCTCCTCTTCTTCTTCAGATGGCTaGTTCTCAAAGCGCAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GKTDIWEGAPRALDTSSSSSSDG*FSKRRR Trigger: CCGCCTGCGCTTTGAGAAGCAGCCATCTGAAGAAGA...AGAGGAGGAGGTGTCAAGAGCTCTGGGAGCCCCTTCCCAAATGTCTGTCTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | CTAGACTTCCTCTTGGAGACAACCCTGTTGAAGAACAGAAAGGCAGAGAGAGGTATGAAGCGCAGCGGATaGTGCCCGCTTCGGGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LDFLLETTLLKNRKAERGMKRSG*CPLRDW Trigger: CCAGTCCCGAAGCGGGCACCATCCGCTGCGCTTCAT...ACCTCTCTCTGCCTTTCTGTTCTTCAACAGGGTTGTCTCCAAGAGGAAGTCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| CDS-3UTR CCA 90 bp | AAACCAGGAAGATGGGGAGAGCCTTGGTCGACCTCCAGGAAAGAGCCAGAGCTGGATGAGAGCATCATCTaGGTACCCAACAGGGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: KPGRWGEPWSTSRKEPELDESII*VPNRET Trigger: GGTTTCCCTGTTGGGTACCCAGATGATGCTCTCATC...CAGCTCTGGCTCTTTCCTGGAGGTCGACCAAGGCTCTCCCCATCTTCCTGGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR TCA 90 bp | CCATGTCCCCTCCCTGGGGAACACTCAGGGTACAATGACATGTCTCTGGAGTCCCTTGGGTCAGGATGCTaGTGTCATCTTCAAACATGG | + |
|
Preference number: 4 (lower is better) Translates to: PCPLPGEHSGYNDMSLESLGSGC*CHLQTW Trigger: CCATGTTTGAAGATGACATCAGCATCCTGACCCAAG...GGACTCCAGAGACATGTCATTGTACCCTGAGTGTTCCCCAGGGAGGGGACATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR TCA 90 bp | GCAGACTCTCTGCTCTGCATCTCAATTACCCAGGCTGAGGGAAGCAGTACACTAGCAGGGAGCCATCCTTaGGTTCATACAGAGGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ADSLLCISITQAEGSSTLAGSHP*VHTEGS Trigger: GCTTCCCTCTGTATGAACTCAAGGATGGCTCCCTGC...TAGTGTACTGCTTCCCTCAGCCTGGGTAATTGAGATGCAGAGCAGAGAGTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
||
| CDS-3UTR TCA 90 bp | AACAGAAAGGCAGAGAGAGGTGGAGGGTATATCCTCCTCATCCCAGACCAGATCGCAGGGAGCCATCCTTaGGTTCATACAGAGGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: NRKAERGGGYILLIPDQIAGSHP*VHTEGS Trigger: GCTTCCCTCTGTATGAACTCAAGGATGGCTCCCTGC...GATCTGGTCTGGGATGAGGAGGATATACCCTCCACCTCTCTCTGCCTTTCTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR TCA 90 bp | CTAGACTTCCTCTTGGAGACAACCCTGTTGAAGAACAGAAAGGCAGAGAGAGGTCAGATCTGCCGTAGATaGGTCTCTACCAGGGCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LDFLLETTLLKNRKAERGQICRR*VSTRAR Trigger: GCGGGCCCTGGTAGAGACTCATCTACGGCAGATCTG...ACCTCTCTCTGCCTTTCTGTTCTTCAACAGGGTTGTCTCCAAGAGGAAGTCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR TCA 90 bp | TGGGTGGGTAGGTATGGGAAGGGGGTTAGCTCTTTTGAAATTAATCTCCACAGCCAGATCTGCCGTAGATaGGTCTCTACCAGGGCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: WVGRYGKGVSSFEINLHSQICRR*VSTRAR Trigger: GCGGGCCCTGGTAGAGACTCATCTACGGCAGATCTG...GCTGTGGAGATTAATTTCAAAAGAGCTAACCCCCTTCCCATACCTACCCACCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | GCAGACTCTCTGCTCTGCATCTCAATTACCCAGGCTGAGGGAAGCAGTACACTACCGAGCTGCTCCTCCTaGTCCTTACTCTTCTGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: ADSLLCISITQAEGSSTLPSCSS*SLLFCN Trigger: GTTGCAGAAGAGTAAGGAGCAGGAGGAGCAGCTCGG...TAGTGTACTGCTTCCCTCAGCCTGGGTAATTGAGATGCAGAGCAGAGAGTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
||
| CDS-3UTR GCA 90 bp | AACAGAAAGGCAGAGAGAGGTGGAGGGTATATCCTCCTCATCCCAGACCAGATCAGGCCCTGCTGTTGCTaGAGCTGTTTCTCCAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: NRKAERGGGYILLIPDQIRPCCC*SCFSRP Trigger: TGGTCTGGAGAAACAGCTGCAGCAACAGCAGGGCCT...GATCTGGTCTGGGATGAGGAGGATATACCCTCCACCTCTCTCTGCCTTTCTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | CCTCTCCCTCCCCTGAGCACTAGACTTCCTCTTGGAGACAACCCTGTTGAAGAATCTTCTTCAGATGGCTaGTTCTCAAAGCGCAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PLPPLSTRLPLGDNPVEESSSDG*FSKRRR Trigger: CCGCCTGCGCTTTGAGAAGCAGCCATCTGAAGAAGA...TTCTTCAACAGGGTTGTCTCCAAGAGGAAGTCTAGTGCTCAGGGGAGGGAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | AGGAAGATGGGGAGAGCCTTGGTCGACCTCCAGGAAAGAGCCAGAGCTGAGTGGTTCTGCAACTCGTGTTaGAATTGGTTGAGTCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RKMGRALVDLQERARAEWFCNSC*NWLSRC Trigger: GCAACGACTCAACCAATTCCAACACGAGTTGCAGAA...CCACTCAGCTCTGGCTCTTTCCTGGAGGTCGACCAAGGCTCTCCCCATCTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | AAGATGGGGAGAGCCTTGGTCGACCTCCAGGAAAGAGCCAGAGCTGAGTGGTGCTTCTGCAACTCGTGTTaGAATTGGTTGAGTCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KMGRALVDLQERARAEWCFCNSC*NWLSRC Trigger: GCAACGACTCAACCAATTCCAACACGAGTTGCAGAA...GCACCACTCAGCTCTGGCTCTTTCCTGGAGGTCGACCAAGGCTCTCCCCATCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | CTAGACTTCCTCTTGGAGACAACCCTGTTGAAGAACAGAAAGGCAGAGAGAGGTCACATTCCGACTGGTTaGAGGCCAGATCCTGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LDFLLETTLLKNRKAERGHIPTG*RPDPGP Trigger: GGGCCCAGGATCTGGCCTCCAACCAGTCGGAATGTG...ACCTCTCTCTGCCTTTCTGTTCTTCAACAGGGTTGTCTCCAAGAGGAAGTCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR TCA 90 bp | ATGAGGTGCGACCCCAGAGAGAGGGCAGACTCTCTGCTCTGCATCTCAATTACCCTTGGGTCAGGATGCTaGTGTCATCTTCAAACATGG | + |
|
Preference number: 4 (lower is better) Translates to: MRCDPRERADSLLCISITLGSGC*CHLQTW Trigger: CCATGTTTGAAGATGACATCAGCATCCTGACCCAAG...GGTAATTGAGATGCAGAGCAGAGAGTCTGCCCTCTCTCTGGGGTCGCACCTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
||
| CDS-3UTR TCA 90 bp | GAAGACGGCACACACATTGACTCGGTAGCTAGTGGAGGTATCTGGGGACCGCAACTTGGGTCAGGATGCTaGTGTCATCTTCAAACATGG | + |
|
Preference number: 4 (lower is better) Translates to: EDGTHIDSVASGGIWGPQLGSGC*CHLQTW Trigger: CCATGTTTGAAGATGACATCAGCATCCTGACCCAAG...TTGCGGTCCCCAGATACCTCCACTAGCTACCGAGTCAATGTGTGTGCCGTCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR TCA 90 bp | GTGGGGAGGGGGCCTGGAAGATTTGGATCAGAATGGCACATTCGATGGACAGTGCTTGGGTCAGGATGCTaGTGTCATCTTCAAACATGG | + |
|
Preference number: 4 (lower is better) Translates to: VGRGPGRFGSEWHIRWTVLGSGC*CHLQTW Trigger: CCATGTTTGAAGATGACATCAGCATCCTGACCCAAG...CACTGTCCATCGAATGTGCCATTCTGATCCAAATCTTCCAGGCCCCCTCCCCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | GAAGACGGCACACACATTGACTCGGTAGCTAGTGGAGGTATCTGGGGACCGCAAAATTGGTTGAGTCGTTaGTGCAGACTGACCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EDGTHIDSVASGGIWGPQNWLSR*CRLTFS Trigger: GGAGAAGGTCAGTCTGCAGCAACGACTCAACCAATT...TTGCGGTCCCCAGATACCTCCACTAGCTACCGAGTCAATGTGTGTGCCGTCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | CTAGACTTCCTCTTGGAGACAACCCTGTTGAAGAACAGAAAGGCAGAGAGAGGTGGCCCCAAGGCCTCTTaGGTCAGGATGCTGATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LDFLLETTLLKNRKAERGGPKAS*VRMLMS Trigger: TGACATCAGCATCCTGACCCAAGAGGCCTTGGGGCC...ACCTCTCTCTGCCTTTCTGTTCTTCAACAGGGTTGTCTCCAAGAGGAAGTCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGGGGGCCTGGAAGATTTGGATCAGAATGGCACATTCGATGGACAGTGGCGTTCTGCAACTCGTGTTaGAATTGGTTGAGTCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GRGPGRFGSEWHIRWTVAFCNSC*NWLSRC Trigger: GCAACGACTCAACCAATTCCAACACGAGTTGCAGAA...CGCCACTGTCCATCGAATGTGCCATTCTGATCCAAATCTTCCAGGCCCCCTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | AGGGGGCCTGGAAGATTTGGATCAGAATGGCACATTCGATGGACAGTGGCGTTCGATGAGAGCATCATCTaGGTACCCAACAGGGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: RGPGRFGSEWHIRWTVAFDESII*VPNRET Trigger: GGTTTCCCTGTTGGGTACCCAGATGATGCTCTCATC...GAACGCCACTGTCCATCGAATGTGCCATTCTGATCCAAATCTTCCAGGCCCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | GACGGCACACACATTGACTCGGTAGCTAGTGGAGGTATCTGGGGACCGCAAGGGTTGCTGTTCTCAAGGTaGGAGTCTATGTGTTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: DGTHIDSVASGGIWGPQGLLFSR*ESMCLM Trigger: CATCAAACACATAGACTCCCACCTTGAGAACAGCAA...CCCTTGCGGTCCCCAGATACCTCCACTAGCTACCGAGTCAATGTGTGTGCCGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR TCA 90 bp | CTAGACTTCCTCTTGGAGACAACCCTGTTGAAGAACAGAAAGGCAGAGAGAGGTGCAGGGAGCCATCCTTaGGTTCATACAGAGGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LDFLLETTLLKNRKAERGAGSHP*VHTEGS Trigger: GCTTCCCTCTGTATGAACTCAAGGATGGCTCCCTGC...ACCTCTCTCTGCCTTTCTGTTCTTCAACAGGGTTGTCTCCAAGAGGAAGTCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGGGAGGGGGCCTGGAAGATTTGGATCAGAATGGCACATTCGATGGACAGTTACAGAGGGAAGCCATaGTCCTCTCCAAAATCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: CGEGAWKIWIRMAHSMDSYRGKP*SSPKSV Trigger: CACTGATTTTGGAGAGGAGCATGGCTTCCCTCTGTA...ACTGTCCATCGAATGTGCCATTCTGATCCAAATCTTCCAGGCCCCCTCCCCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR GCA 90 bp | AAATTAATCTCCACAGCACCCTGGGCCCAATCTCAGGTTCTGGCCTGGAAGGCAAATTGGTTGAGTCGTTaGTGCAGACTGACCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KLISTAPWAQSQVLAWKANWLSR*CRLTFS Trigger: GGAGAAGGTCAGTCTGCAGCAACGACTCAACCAATT...TGCCTTCCAGGCCAGAACCTGAGATTGGGCCCAGGGTGCTGTGGAGATTAATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | GTGGGGAGGGGGCCTGGAAGATTTGGATCAGAATGGCACATTCGATGGACAGTGAACTCGTGTTGGAATTaGTTGAGTCGTTGCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VGRGPGRFGSEWHIRWTVNSCWN*LSRCCR Trigger: TCTGCAGCAACGACTCAACCAATTCCAACACGAGTT...CACTGTCCATCGAATGTGCCATTCTGATCCAAATCTTCCAGGCCCCCTCCCCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | AACAGAAAGGCAGAGAGAGGTGGAGGGTATATCCTCCTCATCCCAGACCAGATCCTCCTCTTCTTCAGATaGCTGCTTCTCAAAGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NRKAERGGGYILLIPDQILLFFR*LLLKAQ Trigger: CTGCGCTTTGAGAAGCAGCCATCTGAAGAAGAGGAG...GATCTGGTCTGGGATGAGGAGGATATACCCTCCACCTCTCTCTGCCTTTCTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | AAACCAGGAAGATGGGGAGAGCCTTGGTCGACCTCCAGGAAAGAGCCAGAGCTGTTGCTGTTCTCAAGGTaGGAGTCTATGTGTTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: KPGRWGEPWSTSRKEPELLLFSR*ESMCLM Trigger: CATCAAACACATAGACTCCCACCTTGAGAACAGCAA...CAGCTCTGGCTCTTTCCTGGAGGTCGACCAAGGCTCTCCCCATCTTCCTGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR TCA 90 bp | CTAGACTTCCTCTTGGAGACAACCCTGTTGAAGAACAGAAAGGCAGAGAGAGGTTCTCCATCAGTAGGTTaGTGGATGGCCAGGACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LDFLLETTLLKNRKAERGSPSVG*WMARTV Trigger: CACAGTCCTGGCCATCCATCAACCTACTGATGGAGA...ACCTCTCTCTGCCTTTCTGTTCTTCAACAGGGTTGTCTCCAAGAGGAAGTCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGGGAGGGGGCCTGGAAGATTTGGATCAGAATGGCACATTCGATGGACAGTAACTCGTGTTGGAATTaGTTGAGTCGTTGCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: CGEGAWKIWIRMAHSMDSNSCWN*LSRCCR Trigger: TCTGCAGCAACGACTCAACCAATTCCAACACGAGTT...ACTGTCCATCGAATGTGCCATTCTGATCCAAATCTTCCAGGCCCCCTCCCCACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | CCTCTCCCTCCCCTGAGCACTAGACTTCCTCTTGGAGACAACCCTGTTGAAGAAAACTCGTGTTGGAATTaGTTGAGTCGTTGCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PLPPLSTRLPLGDNPVEENSCWN*LSRCCR Trigger: TCTGCAGCAACGACTCAACCAATTCCAACACGAGTT...TTCTTCAACAGGGTTGTCTCCAAGAGGAAGTCTAGTGCTCAGGGGAGGGAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | CTACTGTGTGTGAAGATAAGCAATGAGGTGCGACCCCAGAGAGAGGGCAGACTCTTCTGCAACTCGTGTTaGAATTGGTTGAGTCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLCVKISNEVRPQREGRLFCNSC*NWLSRC Trigger: GCAACGACTCAACCAATTCCAACACGAGTTGCAGAA...GAGTCTGCCCTCTCTCTGGGGTCGCACCTCATTGCTTATCTTCACACACAGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
||
| CDS-3UTR CCA 90 bp | GAAAGACAGACATTTGGGAAGGGGCTCCCAGAGCTCTTGACACCTCCTCCTCTCTTGCTGTTCTCAAGGTaGGAGTCTATGTGTTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: ERQTFGKGLPELLTPPPLLLFSR*ESMCLM Trigger: CATCAAACACATAGACTCCCACCTTGAGAACAGCAA...GAGAGGAGGAGGTGTCAAGAGCTCTGGGAGCCCCTTCCCAAATGTCTGTCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | GGAAAGACAGACATTTGGGAAGGGGCTCCCAGAGCTCTTGACACCTCCTCCTCTTTGCTGTTCTCAAGGTaGGAGTCTATGTGTTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: GKTDIWEGAPRALDTSSSLLFSR*ESMCLM Trigger: CATCAAACACATAGACTCCCACCTTGAGAACAGCAA...AGAGGAGGAGGTGTCAAGAGCTCTGGGAGCCCCTTCCCAAATGTCTGTCTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CCA 90 bp | CTAGACTTCCTCTTGGAGACAACCCTGTTGAAGAACAGAAAGGCAGAGAGAGGTCTCCTCTTCTTCAGATaGCTGCTTCTCAAAGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LDFLLETTLLKNRKAERGLLFFR*LLLKAQ Trigger: CTGCGCTTTGAGAAGCAGCCATCTGAAGAAGAGGAG...ACCTCTCTCTGCCTTTCTGTTCTTCAACAGGGTTGTCTCCAAGAGGAAGTCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CAA 90 bp | GACAGTGGCGTTCACTGCCATCGGCTGGCCGAGGCCCCAGGGAGGCTCAAAGCGCCCTGGAAGCCGGCCTaGGCGTGGTGGCTGGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: DSGVHCHRLAEAPGRLKAPWKPA*AWWLGG Trigger: GCCGCCCAGCCACCACGCCAAGGCCGGCTTCCAGGG...CGCTTTGAGCCTCCCTGGGGCCTCGGCCAGCCGATGGCAGTGAACGCCACTGTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CAA 90 bp | TCACACTTGGGCTCTGGGGAACCTGTGGTGTCAGGAGCTGCAGTGGGGGTGATGCCCTGGAAGCCGGCCTaGGCGTGGTGGCTGGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: SHLGSGEPVVSGAAVGVMPWKPA*AWWLGG Trigger: GCCGCCCAGCCACCACGCCAAGGCCGGCTTCCAGGG...CATCACCCCCACTGCAGCTCCTGACACCACAGGTTCCCCAGAGCCCAAGTGTGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CAA 90 bp | GACAGTGGCGTTCACTGCCATCGGCTGGCCGAGGCCCCAGGGAGGCTCAAAGCGCCGGAGGCCCTGCTGTaGCTGCAGCTGTTTCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: DSGVHCHRLAEAPGRLKAPEALL*LQLFLQ Trigger: CTGGAGAAACAGCTGCAGCAACAGCAGGGCCTCCGG...CGCTTTGAGCCTCCCTGGGGCCTCGGCCAGCCGATGGCAGTGAACGCCACTGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CAA 90 bp | GACGGCACACACATTGACTCGGTAGCTAGTGGAGGTATCTGGGGACCGCAAGGGCCCTGGAAGCCGGCCTaGGCGTGGTGGCTGGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: DGTHIDSVASGGIWGPQGPWKPA*AWWLGG Trigger: GCCGCCCAGCCACCACGCCAAGGCCGGCTTCCAGGG...CCCTTGCGGTCCCCAGATACCTCCACTAGCTACCGAGTCAATGTGTGTGCCGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CAA 90 bp | AAACCAGGAAGATGGGGAGAGCCTTGGTCGACCTCCAGGAAAGAGCCAGAGCTGCCCTGGAAGCCGGCCTaGGCGTGGTGGCTGGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: KPGRWGEPWSTSRKEPELPWKPA*AWWLGG Trigger: GCCGCCCAGCCACCACGCCAAGGCCGGCTTCCAGGG...CAGCTCTGGCTCTTTCCTGGAGGTCGACCAAGGCTCTCCCCATCTTCCTGGTTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CAA 90 bp | CATCGGCTGGCCGAGGCCCCAGGGAGGCTCAAAGCGAGGGGTGGATTCATAGTGCCGGAGGCCCTGCTGTaGCTGCAGCTGTTTCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HRLAEAPGRLKARGGFIVPEALL*LQLFLQ Trigger: CTGGAGAAACAGCTGCAGCAACAGCAGGGCCTCCGG...CACTATGAATCCACCCCTCGCTTTGAGCCTCCCTGGGGCCTCGGCCAGCCGATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CAA 90 bp | AAGATGGGGAGAGCCTTGGTCGACCTCCAGGAAAGAGCCAGAGCTGAGTGGTGCGGGCCCCAAGGCCTCTaGGGTCAGGATGCTGATGTC | + |
|
Preference number: 5 (lower is better) Translates to: KMGRALVDLQERARAEWCGPQGL*GQDADV Trigger: GACATCAGCATCCTGACCCAAGAGGCCTTGGGGCCC...GCACCACTCAGCTCTGGCTCTTTCCTGGAGGTCGACCAAGGCTCTCCCCATCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CAA 90 bp | ACTACTCACGTTGATGGATGGCCAGGACTGTGCGTGCTCAGCGTGGGCATAGGCGGGCCCCAAGGCCTCTaGGGTCAGGATGCTGATGTC | + |
|
Preference number: 5 (lower is better) Translates to: TTHVDGWPGLCVLSVGIGGPQGL*GQDADV Trigger: GACATCAGCATCCTGACCCAAGAGGCCTTGGGGCCC...GCCTATGCCCACGCTGAGCACGCACAGTCCTGGCCATCCATCAACGTGAGTAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
||
| CDS-3UTR CAA 90 bp | GACGGCACACACATTGACTCGGTAGCTAGTGGAGGTATCTGGGGACCGCAAGGGCCGGAGGCCCTGCTGTaGCTGCAGCTGTTTCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: DGTHIDSVASGGIWGPQGPEALL*LQLFLQ Trigger: CTGGAGAAACAGCTGCAGCAACAGCAGGGCCTCCGG...CCCTTGCGGTCCCCAGATACCTCCACTAGCTACCGAGTCAATGTGTGTGCCGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CAA 90 bp | GGGAGGGGGCCTGGAAGATTTGGATCAGAATGGCACATTCGATGGACAGTGGCGGCATTCCGCCTGGAGTaGCTCCTCCCGGAGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GRGPGRFGSEWHIRWTVAAFRLE*LLPELS Trigger: GCTCAGCTCCGGGAGGAGCAACTCCAGGCGGAATGC...CGCCACTGTCCATCGAATGTGCCATTCTGATCCAAATCTTCCAGGCCCCCTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGAGAGAGGTGGAGGGTATATCCTCCTCATCCCAGACCAGATCCCCGCTCCCCGGGTCTCCTGCAGTaGCTTCAGCTCTCCCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GRERWRVYPPHPRPDPRSPGLLQ*LQLSLK Trigger: CTTCAGGGAGAGCTGAAGCAACTGCAGGAGACCCGG...GGAGCGGGGATCTGGTCTGGGATGAGGAGGATATACCCTCCACCTCTCTCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CAA 90 bp | CAGACATTTGGGAAGGGGCTCCCAGAGCTCTTGACACCTCCTCCTCTCCCTCCCCCGGGTCTCCTGCAGTaGCTTCAGCTCTCCCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QTFGKGLPELLTPPPLPPPGLLQ*LQLSLK Trigger: CTTCAGGGAGAGCTGAAGCAACTGCAGGAGACCCGG...GGGAGGGAGAGGAGGAGGTGTCAAGAGCTCTGGGAGCCCCTTCCCAAATGTCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CAA 90 bp | GGCGTTCACTGCCATCGGCTGGCCGAGGCCCCAGGGAGGCTCAAAGCGAGGGGTTGGGAGTCTATGTGTTaGATGAGAGCATCATCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GVHCHRLAEAPGRLKARGWESMC*MRASSG Trigger: CCCAGATGATGCTCTCATCAAACACATAGACTCCCA...ACCCCTCGCTTTGAGCCTCCCTGGGGCCTCGGCCAGCCGATGGCAGTGAACGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CAA 90 bp | GGAAAGACAGACATTTGGGAAGGGGCTCCCAGAGCTCTTGACACCTCCTCCTCTGCATTCCGCCTGGAGTaGCTCCTCCCGGAGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GKTDIWEGAPRALDTSSSAFRLE*LLPELS Trigger: GCTCAGCTCCGGGAGGAGCAACTCCAGGCGGAATGC...AGAGGAGGAGGTGTCAAGAGCTCTGGGAGCCCCTTCCCAAATGTCTGTCTTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CAA 90 bp | GACGGCACACACATTGACTCGGTAGCTAGTGGAGGTATCTGGGGACCGCAAGGGCCGGGTCTCCTGCAGTaGCTTCAGCTCTCCCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: DGTHIDSVASGGIWGPQGPGLLQ*LQLSLK Trigger: CTTCAGGGAGAGCTGAAGCAACTGCAGGAGACCCGG...CCCTTGCGGTCCCCAGATACCTCCACTAGCTACCGAGTCAATGTGTGTGCCGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CAA 90 bp | GCTGGCAGACAGTTCCCTGGATTGAGGGTAATGGCCCAGGAGTCCCAGCCTCAACCGGGTCTCCTGCAGTaGCTTCAGCTCTCCCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: AGRQFPGLRVMAQESQPQPGLLQ*LQLSLK Trigger: CTTCAGGGAGAGCTGAAGCAACTGCAGGAGACCCGG...TTGAGGCTGGGACTCCTGGGCCATTACCCTCAATCCAGGGAACTGTCTGCCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CAA 90 bp | AAGATGGGGAGAGCCTTGGTCGACCTCCAGGAAAGAGCCAGAGCTGAGTGGTGCTCACATTCCGACTGGTaGGAGGCCAGATCCTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: KMGRALVDLQERARAEWCSHSDW*EARSWA Trigger: GGCCCAGGATCTGGCCTCCAACCAGTCGGAATGTGA...GCACCACTCAGCTCTGGCTCTTTCCTGGAGGTCGACCAAGGCTCTCCCCATCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CAA 90 bp | GACGGCACACACATTGACTCGGTAGCTAGTGGAGGTATCTGGGGACCGCAAGGGTCACATTCCGACTGGTaGGAGGCCAGATCCTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: DGTHIDSVASGGIWGPQGSHSDW*EARSWA Trigger: GGCCCAGGATCTGGCCTCCAACCAGTCGGAATGTGA...CCCTTGCGGTCCCCAGATACCTCCACTAGCTACCGAGTCAATGTGTGTGCCGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CAA 90 bp | GGAAAGACAGACATTTGGGAAGGGGCTCCCAGAGCTCTTGACACCTCCTCCTCTGGGCCCCAAGGCCTCTaGGGTCAGGATGCTGATGTC | + |
|
Preference number: 5 (lower is better) Translates to: GKTDIWEGAPRALDTSSSGPQGL*GQDADV Trigger: GACATCAGCATCCTGACCCAAGAGGCCTTGGGGCCC...AGAGGAGGAGGTGTCAAGAGCTCTGGGAGCCCCTTCCCAAATGTCTGTCTTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CAA 90 bp | AGCCTCAAGGCAGCCCCTTTGGGCTGGATCATCCAAGGCCTGCAGGGTCCTCCCCAACTCGTGTTGGAATaGGTTGAGTCGTTGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SLKAAPLGWIIQGLQGPPQLVLE*VESLLQ Trigger: CTGCAGCAACGACTCAACCAATTCCAACACGAGTTG...GGGAGGACCCTGCAGGCCTTGGATGATCCAGCCCAAAGGGGCTGCCTTGAGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CAA 90 bp | AGGGAAGACGGCACACACATTGACTCGGTAGCTAGTGGAGGTATCTGGGGACCGTCACATTCCGACTGGTaGGAGGCCAGATCCTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: REDGTHIDSVASGGIWGPSHSDW*EARSWA Trigger: GGCCCAGGATCTGGCCTCCAACCAGTCGGAATGTGA...CGGTCCCCAGATACCTCCACTAGCTACCGAGTCAATGTGTGTGCCGTCTTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CAA 90 bp | GATGGACAGTGGCGTTCACTGCCATCGGCTGGCCGAGGCCCCAGGGAGGCTCAATGGGAGTCTATGTGTTaGATGAGAGCATCATCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: DGQWRSLPSAGRGPREAQWESMC*MRASSG Trigger: CCCAGATGATGCTCTCATCAAACACATAGACTCCCA...TTGAGCCTCCCTGGGGCCTCGGCCAGCCGATGGCAGTGAACGCCACTGTCCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS CCA 90 bp | TGTTTGATGAGAGCATCATCTGGGTACCCAACAGGGAAACCCAGCTaGCAGAGGGGGCAGCTGCGGATATCAGAGCCCACCGTCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: CLMRASSGYPTGKPS*QRGQLRISEPTVSI Trigger: GATGGAGACGGTGGGCTCTGATATCCGCAGCTGCCCCCTCTGCCAGCTGGGTTTCCCTGTTGGGTACCCAGATGATGCTCTCATCAAACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CAA 90 bp | GCTGAGTCACACTTGGGCTCTGGGGAACCTGTGGTGTCAGGAGCTGCAGTGGGGCAACTCGTGTTGGAATaGGTTGAGTCGTTGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: AESHLGSGEPVVSGAAVGQLVLE*VESLLQ Trigger: CTGCAGCAACGACTCAACCAATTCCAACACGAGTTG...CCCCACTGCAGCTCCTGACACCACAGGTTCCCCAGAGCCCAAGTGTGACTCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CAA 90 bp | TGTGGGGAGGGGGCCTGGAAGATTTGGATCAGAATGGCACATTCGATGGACAGTCCGGAGGCCCTGCTGTaGCTGCAGCTGTTTCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: CGEGAWKIWIRMAHSMDSPEALL*LQLFLQ Trigger: CTGGAGAAACAGCTGCAGCAACAGCAGGGCCTCCGG...ACTGTCCATCGAATGTGCCATTCTGATCCAAATCTTCCAGGCCCCCTCCCCACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS CCA 90 bp | GCTGTTCTCAAGGTGGGAGTCTATGTGTTTGATGAGAGCATCATCTaGGTACCCAACAGGGAAACCCAGCTGGCAGAGGGGGCAGCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: AVLKVGVYVFDESII*VPNRETQLAEGAAA Trigger: CGCAGCTGCCCCCTCTGCCAGCTGGGTTTCCCTGTTGGGTACCCAGATGATGCTCTCATCAAACACATAGACTCCCACCTTGAGAACAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
||
| CDS-3UTR CAA 90 bp | AACAGAAAGGCAGAGAGAGGTGGAGGGTATATCCTCCTCATCCCAGACCAGATCGGGCCCCAAGGCCTCTaGGGTCAGGATGCTGATGTC | + |
|
Preference number: 5 (lower is better) Translates to: NRKAERGGGYILLIPDQIGPQGL*GQDADV Trigger: GACATCAGCATCCTGACCCAAGAGGCCTTGGGGCCC...GATCTGGTCTGGGATGAGGAGGATATACCCTCCACCTCTCTCTGCCTTTCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| CDS-3UTR CAA 90 bp | TCACACTTGGGCTCTGGGGAACCTGTGGTGTCAGGAGCTGCAGTGGGGGTGATGCAACTCGTGTTGGAATaGGTTGAGTCGTTGCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: SHLGSGEPVVSGAAVGVMQLVLE*VESLLQ Trigger: CTGCAGCAACGACTCAACCAATTCCAACACGAGTTG...CATCACCCCCACTGCAGCTCCTGACACCACAGGTTCCCCAGAGCCCAAGTGTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| CDS-3UTR CAA 90 bp | AGGGGGCCTGGAAGATTTGGATCAGAATGGCACATTCGATGGACAGTGGCGTTCTCACATTCCGACTGGTaGGAGGCCAGATCCTGGGCC | + |
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Preference number: 5 (lower is better) Translates to: RGPGRFGSEWHIRWTVAFSHSDW*EARSWA Trigger: GGCCCAGGATCTGGCCTCCAACCAGTCGGAATGTGA...GAACGCCACTGTCCATCGAATGTGCCATTCTGATCCAAATCTTCCAGGCCCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| CDS TCA 90 bp | CTGTGTAGGCCAGCGCCAAGTTCACCTGATCATCCCCAACTCTCTTaGCCCAAGCCATGTCACATTCCGACTGGTTGGAGGCCAGATCCT | + |
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Preference number: 5 (lower is better) Translates to: LCRPAPSSPDHPQLS*PKPCHIPTGWRPDP Trigger: AGGATCTGGCCTCCAACCAGTCGGAATGTGACATGGCTTGGGTCAAGAGAGTTGGGGATGATCAGGTGAACTTGGCGCTGGCCTACACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| CDS-3UTR CAA 90 bp | CTCCTCTGTCAGTTCTGTGTAGGCCAGCGCCAAGTTCACCCTCGGGTCCAGTCTGAATTGGTTGAGTCGTaGCTGCAGACTGACCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: LLCQFCVGQRQVHPRVQSELVES*LQTDLL Trigger: GAGAAGGTCAGTCTGCAGCAACGACTCAACCAATTC...AGACTGGACCCGAGGGTGAACTTGGCGCTGGCCTACACAGAACTGACAGAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
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| CDS-3UTR CAA 90 bp | AGGAAGATGGGGAGAGCCTTGGTCGACCTCCAGGAAAGAGCCAGAGCTGAGTGGTCGTGTTGGAATTGGTaGAGTCGTTGCTGCAGACTG | + |
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Preference number: 5 (lower is better) Translates to: RKMGRALVDLQERARAEWSCWNW*SRCCRL Trigger: CAGTCTGCAGCAACGACTCAACCAATTCCAACACGA...CCACTCAGCTCTGGCTCTTTCCTGGAGGTCGACCAAGGCTCTCCCCATCTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| CDS-3UTR CAA 90 bp | TGCATGACCCAAGGCAGGTCCCCCTCTCAGAGCCAGATAGTGCAGGTCCAAGTCCAACTCGTGTTGGAATaGGTTGAGTCGTTGCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: CMTQGRSPSQSQIVQVQVQLVLE*VESLLQ Trigger: CTGCAGCAACGACTCAACCAATTCCAACACGAGTTG...GACTTGGACCTGCACTATCTGGCTCTGAGAGGGGGACCTGCCTTGGGTCATGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
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| CDS-3UTR CAA 90 bp | TGGGTGGGTAGGTATGGGAAGGGGGTTAGCTCTTTTGAAATTAATCTCCACAGCGCATTCCGCCTGGAGTaGCTCCTCCCGGAGCTGAGC | + |
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Preference number: 5 (lower is better) Translates to: WVGRYGKGVSSFEINLHSAFRLE*LLPELS Trigger: GCTCAGCTCCGGGAGGAGCAACTCCAGGCGGAATGC...GCTGTGGAGATTAATTTCAAAAGAGCTAACCCCCTTCCCATACCTACCCACCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| CDS-3UTR CAA 90 bp | CTAGACTTCCTCTTGGAGACAACCCTGTTGAAGAACAGAAAGGCAGAGAGAGGTGCATTCCGCCTGGAGTaGCTCCTCCCGGAGCTGAGC | + |
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Preference number: 5 (lower is better) Translates to: LDFLLETTLLKNRKAERGAFRLE*LLPELS Trigger: GCTCAGCTCCGGGAGGAGCAACTCCAGGCGGAATGC...ACCTCTCTCTGCCTTTCTGTTCTTCAACAGGGTTGTCTCCAAGAGGAAGTCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| CDS-3UTR CAA 90 bp | GAAAGACAGACATTTGGGAAGGGGCTCCCAGAGCTCTTGACACCTCCTCCTCTCAGCAGGGAGCCATCCTaGAGTTCATACAGAGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: ERQTFGKGLPELLTPPPLSREPS*SSYRGK Trigger: CTTCCCTCTGTATGAACTCAAGGATGGCTCCCTGCT...GAGAGGAGGAGGTGTCAAGAGCTCTGGGAGCCCCTTCCCAAATGTCTGTCTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| CDS-3UTR CAA 90 bp | AAACCAGGAAGATGGGGAGAGCCTTGGTCGACCTCCAGGAAAGAGCCAGAGCTGTCGTGTTGGAATTGGTaGAGTCGTTGCTGCAGACTG | + |
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Preference number: 5 (lower is better) Translates to: KPGRWGEPWSTSRKEPELSCWNW*SRCCRL Trigger: CAGTCTGCAGCAACGACTCAACCAATTCCAACACGA...CAGCTCTGGCTCTTTCCTGGAGGTCGACCAAGGCTCTCCCCATCTTCCTGGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| CDS-3UTR CAA 90 bp | AAACCAGGAAGATGGGGAGAGCCTTGGTCGACCTCCAGGAAAGAGCCAGAGCTGCAACTCGTGTTGGAATaGGTTGAGTCGTTGCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: KPGRWGEPWSTSRKEPELQLVLE*VESLLQ Trigger: CTGCAGCAACGACTCAACCAATTCCAACACGAGTTG...CAGCTCTGGCTCTTTCCTGGAGGTCGACCAAGGCTCTCCCCATCTTCCTGGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| CDS-3UTR CAA 90 bp | AAGATGGGGAGAGCCTTGGTCGACCTCCAGGAAAGAGCCAGAGCTGAGTGGTGCTGGGAGTCTATGTGTTaGATGAGAGCATCATCTGGG | + |
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Preference number: 5 (lower is better) Translates to: KMGRALVDLQERARAEWCWESMC*MRASSG Trigger: CCCAGATGATGCTCTCATCAAACACATAGACTCCCA...GCACCACTCAGCTCTGGCTCTTTCCTGGAGGTCGACCAAGGCTCTCCCCATCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| CDS-3UTR CAA 90 bp | CAGAAAGGCAGAGAGAGGTGGAGGGTATATCCTCCTCATCCCAGACCAGATCCCGAATTGGTTGAGTCGTaGCTGCAGACTGACCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: QKGRERWRVYPPHPRPDPELVES*LQTDLL Trigger: GAGAAGGTCAGTCTGCAGCAACGACTCAACCAATTC...GGGATCTGGTCTGGGATGAGGAGGATATACCCTCCACCTCTCTCTGCCTTTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| CDS GCA 90 bp | TCCTTACTCTTCTGCAACTCGTGTTGGAATTGGTTGAGTCGTTGCTaGAGACTGACCTTCTCCACCTCCAGCAGGGAGCCATCCTTGAGT | + |
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Preference number: 5 (lower is better) Translates to: SLLFCNSCWNWLSRC*RLTFSTSSREPSLS Trigger: ACTCAAGGATGGCTCCCTGCTGGAGGTGGAGAAGGTCAGTCTGCAGCAACGACTCAACCAATTCCAACACGAGTTGCAGAAGAGTAAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000066078.12 ENSMUST00000107613.8 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 ENSMUST00000146374.3 |
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| CDS-3UTR CAA 90 bp | CCTCTCCCTCCCCTGAGCACTAGACTTCCTCTTGGAGACAACCCTGTTGAAGAAGAATTGGTTGAGTCGTaGCTGCAGACTGACCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: PLPPLSTRLPLGDNPVEEELVES*LQTDLL Trigger: GAGAAGGTCAGTCTGCAGCAACGACTCAACCAATTC...TTCTTCAACAGGGTTGTCTCCAAGAGGAAGTCTAGTGCTCAGGGGAGGGAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| CDS-3UTR CAA 90 bp | AGGGGGCCTGGAAGATTTGGATCAGAATGGCACATTCGATGGACAGTGGCGTTCTCGTGTTGGAATTGGTaGAGTCGTTGCTGCAGACTG | + |
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Preference number: 5 (lower is better) Translates to: RGPGRFGSEWHIRWTVAFSCWNW*SRCCRL Trigger: CAGTCTGCAGCAACGACTCAACCAATTCCAACACGA...GAACGCCACTGTCCATCGAATGTGCCATTCTGATCCAAATCTTCCAGGCCCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| CDS-3UTR CAA 90 bp | GAAAGACAGACATTTGGGAAGGGGCTCCCAGAGCTCTTGACACCTCCTCCTCTCTGGGAGTCTATGTGTTaGATGAGAGCATCATCTGGG | + |
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Preference number: 5 (lower is better) Translates to: ERQTFGKGLPELLTPPPLWESMC*MRASSG Trigger: CCCAGATGATGCTCTCATCAAACACATAGACTCCCA...GAGAGGAGGAGGTGTCAAGAGCTCTGGGAGCCCCTTCCCAAATGTCTGTCTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| CDS-3UTR CAA 90 bp | ATGATCATCCCCAACTCTCTTGACCCAAGCCATGTCACATTCCGACTGGTTGGATCGTGTTGGAATTGGTaGAGTCGTTGCTGCAGACTG | + |
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Preference number: 5 (lower is better) Translates to: MIIPNSLDPSHVTFRLVGSCWNW*SRCCRL Trigger: CAGTCTGCAGCAACGACTCAACCAATTCCAACACGA...TCCAACCAGTCGGAATGTGACATGGCTTGGGTCAAGAGAGTTGGGGATGATCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107613.8 |
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| CDS-3UTR CAA 90 bp | TGGGTGGGTAGGTATGGGAAGGGGGTTAGCTCTTTTGAAATTAATCTCCACAGCGAATTGGTTGAGTCGTaGCTGCAGACTGACCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: WVGRYGKGVSSFEINLHSELVES*LQTDLL Trigger: GAGAAGGTCAGTCTGCAGCAACGACTCAACCAATTC...GCTGTGGAGATTAATTTCAAAAGAGCTAACCCCCTTCCCATACCTACCCACCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| CDS-3UTR CAA 90 bp | TGGGTGGGTAGGTATGGGAAGGGGGTTAGCTCTTTTGAAATTAATCTCCACAGCTCGTGTTGGAATTGGTaGAGTCGTTGCTGCAGACTG | + |
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Preference number: 5 (lower is better) Translates to: WVGRYGKGVSSFEINLHSSCWNW*SRCCRL Trigger: CAGTCTGCAGCAACGACTCAACCAATTCCAACACGA...GCTGTGGAGATTAATTTCAAAAGAGCTAACCCCCTTCCCATACCTACCCACCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066078.12 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| CDS GCA 72 bp | ACCCAACAGGGAAACCCAGCTGGCAGAGGGGGCAGCTaGGGATATCAGAGCCCACCGTCTCCATCAGTAGGT | + |
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Preference number: 6 (lower is better) Translates to: TQQGNPAGRGGS*GYQSPPSPSVG Trigger: ACCTACTGATGGAGACGGTGGGCTCTGATATCCGCAGCTGCCCCCTCTGCCAGCTGGGTTTCCCTGTTGGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| CDS CCA 72 bp | AGAGCATCATCTGGGTACCCAACAGGGAAACCCAGCTaGCAGAGGGGGCAGCTGCGGATATCAGAGCCCACC | + |
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Preference number: 6 (lower is better) Translates to: RASSGYPTGKPS*QRGQLRISEPT Trigger: GGTGGGCTCTGATATCCGCAGCTGCCCCCTCTGCCAGCTGGGTTTCCCTGTTGGGTACCCAGATGATGCTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| CDS CCA 72 bp | AAGGTGGGAGTCTATGTGTTTGATGAGAGCATCATCTaGGTACCCAACAGGGAAACCCAGCTGGCAGAGGGG | + |
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Preference number: 6 (lower is better) Translates to: KVGVYVFDESII*VPNRETQLAEG Trigger: CCCCTCTGCCAGCTGGGTTTCCCTGTTGGGTACCCAGATGATGCTCTCATCAAACACATAGACTCCCACCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066078.12 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 |
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| CDS CCA 72 bp | TCCTGCTCCTTACTCTTCTGCAACTCGTGTTGGAATTaGTTGAGTCGTTGCTGCAGACTGACCTTCTCCACC | + |
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Preference number: 6 (lower is better) Translates to: SCSLLFCNSCWN*LSRCCRLTFST Trigger: GGTGGAGAAGGTCAGTCTGCAGCAACGACTCAACCAATTCCAACACGAGTTGCAGAAGAGTAAGGAGCAGGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000066078.12 ENSMUST00000107613.8 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 ENSMUST00000146374.3 |
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| CDS CCA 72 bp | TGCTCCTCCTGCTCCTTACTCTTCTGCAACTCGTGTTaGAATTGGTTGAGTCGTTGCTGCAGACTGACCTTC | + |
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Preference number: 6 (lower is better) Translates to: CSSCSLLFCNSC*NWLSRCCRLTF Trigger: GAAGGTCAGTCTGCAGCAACGACTCAACCAATTCCAACACGAGTTGCAGAAGAGTAAGGAGCAGGAGGAGCA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000066078.12 ENSMUST00000107613.8 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 ENSMUST00000146374.3 |
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| CDS CAA 72 bp | TGCTCCTTACTCTTCTGCAACTCGTGTTGGAATTGGTaGAGTCGTTGCTGCAGACTGACCTTCTCCACCTCC | + |
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Preference number: 6 (lower is better) Translates to: CSLLFCNSCWNW*SRCCRLTFSTS Trigger: GGAGGTGGAGAAGGTCAGTCTGCAGCAACGACTCAACCAATTCCAACACGAGTTGCAGAAGAGTAAGGAGCA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000066078.12 ENSMUST00000107613.8 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 ENSMUST00000146374.3 |
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| CDS CAA 72 bp | CTCCTGCTCCTTACTCTTCTGCAACTCGTGTTGGAATaGGTTGAGTCGTTGCTGCAGACTGACCTTCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: LLLLTLLQLVLE*VESLLQTDLLH Trigger: GTGGAGAAGGTCAGTCTGCAGCAACGACTCAACCAATTCCAACACGAGTTGCAGAAGAGTAAGGAGCAGGAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000066078.12 ENSMUST00000107613.8 ENSMUST00000107614.8 ENSMUST00000107615.8 ENSMUST00000118375.8 ENSMUST00000146374.3 |
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