Pregenerated sensors for TBK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020115Ensembl transcript IDs: ENSMUST00000020316.4, ENSMUST00000219400.2, ENSMUST00000219493.2
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGGGTACTGGCAGTTCTGCAGGCGTAGCACACAACCCCCGTCACTaGCTTGGCCATGCTGGCGTCCCCATCCAGATCATAGCGTGGATG | + |
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Preference number: 1 (lower is better) Translates to: QGTGSSAGVAHNPRH*LGHAGVPIQIIAWM Trigger: CATCCACGCTATGATCTGGATGGGGACGCCAGCATGGCCAAGGCAGTGACGGGGGTTGTGTGCTACGCCTGCAGAACTGCCAGTACCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
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| 3UTR TCA 90 bp | GTGCCCAGGTGTCGGCCAGCAAGCCCCCTGGAGACAGCCTGCTGCTaGTGTCCTGAAGACTGCTTTCTATTGTTCCCTGAGAACTGGAAA | + |
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Preference number: 1 (lower is better) Translates to: VPRCRPASPLETACC*CPEDCFLLFPENWK Trigger: TTTCCAGTTCTCAGGGAACAATAGAAAGCAGTCTTCAGGACATCAGCAGCAGGCTGTCTCCAGGGGGCTTGCTGGCCGACACCTGGGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
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| 3UTR GCA 90 bp | ATGTCCGGATGCAGGTACTCTTCTGTGCCGTACAGAGACACAAACTaGTCATCGTCCTCCAGCTCTCGAGCGGCGCCGAAATCCGTGAGT | + |
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Preference number: 1 (lower is better) Translates to: MSGCRYSSVPYRDTN*SSSSSSRAAPKSVS Trigger: ACTCACGGATTTCGGCGCCGCTCGAGAGCTGGAGGACGATGAGCAGTTTGTGTCTCTGTACGGCACAGAAGAGTACCTGCATCCGGACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
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| 3UTR GCA 90 bp | CAGTTTTTCTACATTCCTGTCTCTTGGATGCGTGCCTTCTTGATGTaGCCAGGTGTCGGCCAGCAAGCCCCCTGGAGACAGCCTGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: QFFYIPVSWMRAFLM*PGVGQQAPWRQPAA Trigger: AGCAGCAGGCTGTCTCCAGGGGGCTTGCTGGCCGACACCTGGGCACATCAAGAAGGCACGCATCCAAGAGACAGGAATGTAGAAAAACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
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| 3UTR GCA 90 bp | CCTTTCGCATTAATTCTTGATAGAGCAGCAGGGTACTGGCAGTTCTaGAGGCGTAGCACACAACCCCCGTCACTGCCTTGGCCATGCTGG | + |
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Preference number: 1 (lower is better) Translates to: PFALILDRAAGYWQF*RRSTQPPSLPWPCW Trigger: CCAGCATGGCCAAGGCAGTGACGGGGGTTGTGTGCTACGCCTGCAGAACTGCCAGTACCCTGCTGCTCTATCAAGAATTAATGCGAAAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
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| 3UTR CCA 90 bp | ACCGTACCCCCTTTCGCATTAATTCTTGATAGAGCAGCAGGGTACTaGCAGTTCTGCAGGCGTAGCACACAACCCCCGTCACTGCCTTGG | + |
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Preference number: 1 (lower is better) Translates to: TVPPFALILDRAAGY*QFCRRSTQPPSLPW Trigger: CCAAGGCAGTGACGGGGGTTGTGTGCTACGCCTGCAGAACTGCCAGTACCCTGCTGCTCTATCAAGAATTAATGCGAAAGGGGGTACGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
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| 3UTR GCA 90 bp | TTAGCACTGCCCTTTCATACATGTCCGGATGCAGGTACTCTTCTGTaGCGTACAGAGACACAAACTGCTCATCGTCCTCCAGCTCTCGAG | + |
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Preference number: 1 (lower is better) Translates to: LALPFHTCPDAGTLL*RTETQTAHRPPALE Trigger: CTCGAGAGCTGGAGGACGATGAGCAGTTTGTGTCTCTGTACGGCACAGAAGAGTACCTGCATCCGGACATGTATGAAAGGGCAGTGCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
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| 3UTR GCA 90 bp | ACAGGAGAGAGGCATGTCTCCACTCCAGTCAATTGGTCCGTTTTCTaGTTTCTGTACTCCAGATATTGCACCAGACGGCTTCCCAGTGAT | + |
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Preference number: 1 (lower is better) Translates to: TGERHVSTPVNWSVF*FLYSRYCTRRLPSD Trigger: ATCACTGGGAAGCCGTCTGGTGCAATATCTGGAGTACAGAAAGCAGAAAACGGACCAATTGACTGGAGTGGAGACATGCCTCTCTCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
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| 3UTR TCA 90 bp | TGGTGTGTATGTCTGAAATCTCACCCAGCTCTGCGGCTTCCAGGTTaGCCTTCATCAACTTCTCATACACTTTCACAGTCTTCTCAATGT | + |
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Preference number: 1 (lower is better) Translates to: WCVCLKSHPALRLPG*PSSTSHTLSQSSQC Trigger: ACATTGAGAAGACTGTGAAAGTGTATGAGAAGTTGATGAAGGTCAACCTGGAAGCCGCAGAGCTGGGTGAGATTTCAGACATACACACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
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| 3UTR GCA 90 bp | CCATTCACAAAGGTGTTCATTTCGTGCCCCAGTGTTATCTTCTTGTaGAAACTAGAACTTCCCAGACTCCCTAGGAAGCTAAAGACAGTC | + |
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Preference number: 1 (lower is better) Translates to: PFTKVFISCPSVIFL*KLELPRLPRKLKTV Trigger: GACTGTCTTTAGCTTCCTAGGGAGTCTGGGAAGTTCTAGTTTGCACAAGAAGATAACACTGGGGCACGAAATGAACACCTTTGTGAATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
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| 3UTR-3UTR CCA 90 bp | CGCGGTTCTGTTCCCGTCACAAAGCCCTGTGTCTCCTCCAGTTACACTGTGTCGGCGCATGATGTTGCCTaGCTTGATATCTCGGTGCAC | + |
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Preference number: 2 (lower is better) Translates to: RGSVPVTKPCVSSSYTVSAHDVA*LDISVH Trigger: GTGCACCGAGATATCAAGCCAGGCAACATCATGCGC...CGACACAGTGTAACTGGAGGAGACACAGGGCTTTGTGACGGGAACAGAACCGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGTGGTTAAACCGCGGTTCTGTTCCCGTCACAAAGCCCTGTGTCTCCTCCAGAGTTTGTACACAGACTaGCCGTCCTCCCCTATGACG | + |
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Preference number: 2 (lower is better) Translates to: TVVKPRFCSRHKALCLLQSLYTD*PSSPMT Trigger: CGTCATAGGGGAGGACGGCCAGTCTGTGTACAAACT...CTGGAGGAGACACAGGGCTTTGTGACGGGAACAGAACCGCGGTTTAACCACAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCTCTTGGATGCGTGCCTTCTTGATGTGCCCAGGTGTCGGCCAGCAAGCCCCTATGTTTGCAAGAACTaGGGTAAGCAGTGCCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: CLLDACLLDVPRCRPASPYVCKN*GKQCLK Trigger: CTTCAGGCACTGCTTACCCCAGTTCTTGCAAACATA...GGGGCTTGCTGGCCGACACCTGGGCACATCAAGAAGGCACGCATCCAAGAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
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| 3UTR-3UTR TCA 90 bp | TCCAACACTCCACAGATCAACGGTAGCCCCGTACTTCTTCTGATGGTCCTTTCTCGGCGCCGAAATCCGTaGGTTTGTACACAGACTGGC | + |
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Preference number: 2 (lower is better) Translates to: SNTPQINGSPVLLLMVLSRRRNP*VCTQTG Trigger: GCCAGTCTGTGTACAAACTCACGGATTTCGGCGCCG...AGAAAGGACCATCAGAAGAAGTACGGGGCTACCGTTGATCTGTGGAGTGTTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
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| 3UTR-3UTR GCA 90 bp | GATAATGCCACTTTATCCTTGTCAGGGAACCGACTGTGGTTAAACCGCGGTTCTGGGTACTGGCAGTTCTaGAGGCGTAGCACACAACCC | + |
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Preference number: 2 (lower is better) Translates to: DNATLSLSGNRLWLNRGSGYWQF*RRSTQP Trigger: GGGTTGTGTGCTACGCCTGCAGAACTGCCAGTACCC...AGAACCGCGGTTTAACCACAGTCGGTTCCCTGACAAGGATAAAGTGGCATTATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
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| 3UTR-3UTR GCA 90 bp | TGTCTCTTGGATGCGTGCCTTCTTGATGTGCCCAGGTGTCGGCCAGCAAGCCCCAGTGTTATCTTCTTGTaGAAACTAGAACTTCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: CLLDACLLDVPRCRPASPSVIFL*KLELPR Trigger: TCTGGGAAGTTCTAGTTTGCACAAGAAGATAACACT...GGGGCTTGCTGGCCGACACCTGGGCACATCAAGAAGGCACGCATCCAAGAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
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| 3UTR-3UTR GCA 90 bp | CCCGTCACAAAGCCCTGTGTCTCCTCCAGTTACACTGTGTCGACTATCAGTCCTTATCTCGGTGCACTATaGCGTTCTCTCGGAGATGAT | + |
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Preference number: 2 (lower is better) Translates to: PVTKPCVSSSYTVSTISPYLGAL*RSLGDD Trigger: ATCATCTCCGAGAGAACGGCATAGTGCACCGAGATA...AGGACTGATAGTCGACACAGTGTAACTGGAGGAGACACAGGGCTTTGTGACGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
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| 3UTR-3UTR CCA 90 bp | GCTGGCGTCCCCATCCAGATCATAGCGTGGATGTATTTTAGGGAGGGAAATTTTAGCACCCCAAAGCACTaGCTGGTCATGGCTTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: AGVPIQIIAWMYFREGNFSTPKH*LVMAFF Trigger: GAAGAAAGCCATGACCAGCCAGTGCTTTGGGGTGCT...AAAATTTCCCTCCCTAAAATACATCCACGCTATGATCTGGATGGGGACGCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
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| 3UTR-3UTR CCA 90 bp | CGCGGTTCTGTTCCCGTCACAAAGCCCTGTGTCTCCTCCAGTTACACTGTGTCGAAAGTCTCAGCAGCTTaGTGTGTATGTCTGAAATCT | + |
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Preference number: 2 (lower is better) Translates to: RGSVPVTKPCVSSSYTVSKVSAA*CVCLKS Trigger: AGATTTCAGACATACACACCAAGCTGCTGAGACTTT...CGACACAGTGTAACTGGAGGAGACACAGGGCTTTGTGACGGGAACAGAACCGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
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| 3UTR-3UTR TCA 90 bp | AAACTAGAACTTCCCAGACTCCCTAGGAAGCTAAAGACAGTCCACATTGCGAAGGCTGCGAGCATTTTCTaGGGCAGAGTTTCTTGTAAC | + |
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Preference number: 2 (lower is better) Translates to: KLELPRLPRKLKTVHIAKAASIF*GRVSCN Trigger: GTTACAAGAAACTCTGCCTCAGAAAATGCTCGCAGC...CTTCGCAATGTGGACTGTCTTTAGCTTCCTAGGGAGTCTGGGAAGTTCTAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
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| 3UTR-3UTR GCA 90 bp | GTCTCCTCCAGTTACACTGTGTCGACTATCAGTCCTTTCAAAATTTTAAGAATGCAGCGACCCCGTGGCTaGATGGTAGAATGTCACTCC | + |
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Preference number: 2 (lower is better) Translates to: VSSSYTVSTISPFKILRMQRPRG*MVECHS Trigger: GGAGTGACATTCTACCATGCAGCCACGGGGTCGCTG...CATTCTTAAAATTTTGAAAGGACTGATAGTCGACACAGTGTAACTGGAGGAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
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| 3UTR-3UTR CCA 90 bp | ATAATTCACCTAAAATCAAACATCCGAGGAAAACTGAGATTTGGGCACCCGGTCAGCACCCCAAAGCACTaGCTGGTCATGGCTTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: IIHLKSNIRGKLRFGHPVSTPKH*LVMAFF Trigger: GAAGAAAGCCATGACCAGCCAGTGCTTTGGGGTGCT...GACCGGGTGCCCAAATCTCAGTTTTCCTCGGATGTTTGATTTTAGGTGAATTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020316.4 ENSMUST00000219400.2 |
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| 3UTR CAA 90 bp | TTGGTGTGTATGTCTGAAATCTCACCCAGCTCTGCGGCTTCCAGGTaGACCTTCATCAACTTCTCATACACTTTCACAGTCTTCTCAATG | + |
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Preference number: 2 (lower is better) Translates to: LVCMSEISPSSAASR*TFINFSYTFTVFSM Trigger: CATTGAGAAGACTGTGAAAGTGTATGAGAAGTTGATGAAGGTCAACCTGGAAGCCGCAGAGCTGGGTGAGATTTCAGACATACACACCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
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| 3UTR-3UTR GCA 90 bp | CAGCTCGCTGAGGTCAATCTGTCTTTGTTACAGCAGCCAAAATTCATATATATAGGCTTGATATCTCGGTaGACTATGCCGTTCTCTCGG | + |
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Preference number: 2 (lower is better) Translates to: QLAEVNLSLLQQPKFIYIGLISR*TMPFSR Trigger: CCGAGAGAACGGCATAGTGCACCGAGATATCAAGCC...TATATATATGAATTTTGGCTGCTGTAACAAAGACAGATTGACCTCAGCGAGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
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| 3UTR-3UTR TCA 90 bp | AAGTGTAGAAATAAGAACTCCATTCACAAAGGTGTTCATTTCGTGCCCCAGTGTTGCAGAAATCCAGTGTaGTCACTACCTCCGTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: KCRNKNSIHKGVHFVPQCCRNPV*SLPPSS Trigger: AGAAGACGGAGGTAGTGATCACACTGGATTTCTGCA...ACACTGGGGCACGAAATGAACACCTTTGTGAATGGAGTTCTTATTTCTACACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
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| 3UTR-3UTR TCA 90 bp | GTCTCCTCCAGTTACACTGTGTCGACTATCAGTCCTTTCAAAATTTTAAGAATGCTGCGGCTTCCAGGTTaGCCTTCATCAACTTCTCAT | + |
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Preference number: 2 (lower is better) Translates to: VSSSYTVSTISPFKILRMLRLPG*PSSTSH Trigger: ATGAGAAGTTGATGAAGGTCAACCTGGAAGCCGCAG...CATTCTTAAAATTTTGAAAGGACTGATAGTCGACACAGTGTAACTGGAGGAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
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| 3UTR-3UTR TCA 90 bp | GTCTCCTCCAGTTACACTGTGTCGACTATCAGTCCTTTCAAAATTTTAAGAATGCTTGGTGTGTATGTCTaGAATCTCACCCAGCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: VSSSYTVSTISPFKILRMLGVYV*NLTQLC Trigger: GCAGAGCTGGGTGAGATTTCAGACATACACACCAAG...CATTCTTAAAATTTTGAAAGGACTGATAGTCGACACAGTGTAACTGGAGGAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
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| 3UTR-3UTR CCA 90 bp | TACACTTTCACAGTCTTCTCAATGTTCCTGATGCAGAAATCCAGTGTGATCACTTCCACTCCAGTCAATTaGTCCGTTTTCTGCTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: YTFTVFSMFLMQKSSVITSTPVN*SVFCFL Trigger: CAGAAAGCAGAAAACGGACCAATTGACTGGAGTGGA...AGTGATCACACTGGATTTCTGCATCAGGAACATTGAGAAGACTGTGAAAGTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
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| 3UTR-3UTR TCA 90 bp | AAGTGTAGAAATAAGAACTCCATTCACAAAGGTGTTCATTTCGTGCCCCAGTGTGATAGTAAATCTCTGTaGTGCAGTTCAACAGGACCT | + |
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Preference number: 2 (lower is better) Translates to: KCRNKNSIHKGVHFVPQCDSKSL*CSSTGP Trigger: AGGTCCTGTTGAACTGCATCACAGAGATTTACTATC...ACACTGGGGCACGAAATGAACACCTTTGTGAATGGAGTTCTTATTTCTACACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
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| 3UTR-3UTR TCA 90 bp | GTCTCCTCCAGTTACACTGTGTCGACTATCAGTCCTTTCAAAATTTTAAGAATGAGCTGCTTCCTAAGATaGAGCATCTTTCTCATCCAC | + |
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Preference number: 2 (lower is better) Translates to: VSSSYTVSTISPFKILRMSCFLR*SIFLIH Trigger: GTGGATGAGAAAGATGCTTCATCTTAGGAAGCAGCT...CATTCTTAAAATTTTGAAAGGACTGATAGTCGACACAGTGTAACTGGAGGAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
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| 3UTR-3UTR GCA 90 bp | TTGCTCAATAATTCACCTAAAATCAAACATCCGAGGAAAACTGAGATTTGGGCAAGTGTTATCTTCTTGTaGAAACTAGAACTTCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: LLNNSPKIKHPRKTEIWASVIFL*KLELPR Trigger: TCTGGGAAGTTCTAGTTTGCACAAGAAGATAACACT...TGCCCAAATCTCAGTTTTCCTCGGATGTTTGATTTTAGGTGAATTATTGAGCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020316.4 ENSMUST00000219400.2 |
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| 3UTR GCA 72 bp | GGCAGTTCTGCAGGCGTAGCACACAACCCCCGTCACTaGCTTGGCCATGCTGGCGTCCCCATCCAGATCATA | + |
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Preference number: 3 (lower is better) Translates to: GSSAGVAHNPRH*LGHAGVPIQII Trigger: TATGATCTGGATGGGGACGCCAGCATGGCCAAGGCAGTGACGGGGGTTGTGTGCTACGCCTGCAGAACTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
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| 3UTR GCA 72 bp | TGCAGGTACTCTTCTGTGCCGTACAGAGACACAAACTaGTCATCGTCCTCCAGCTCTCGAGCGGCGCCGAAA | + |
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Preference number: 3 (lower is better) Translates to: CRYSSVPYRDTN*SSSSSSRAAPK Trigger: TTTCGGCGCCGCTCGAGAGCTGGAGGACGATGAGCAGTTTGTGTCTCTGTACGGCACAGAAGAGTACCTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
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| 3UTR TCA 72 bp | TTTTCTACATTCCTGTCTCTTGGATGCGTGCCTTCTTaGTGTGCCCAGGTGTCGGCCAGCAAGCCCCCTGGA | + |
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Preference number: 3 (lower is better) Translates to: FSTFLSLGCVPS*CAQVSASKPPG Trigger: TCCAGGGGGCTTGCTGGCCGACACCTGGGCACATCAAGAAGGCACGCATCCAAGAGACAGGAATGTAGAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
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| 3UTR GCA 72 bp | TTAATTCTTGATAGAGCAGCAGGGTACTGGCAGTTCTaGAGGCGTAGCACACAACCCCCGTCACTGCCTTGG | + |
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Preference number: 3 (lower is better) Translates to: LILDRAAGYWQF*RRSTQPPSLPW Trigger: CCAAGGCAGTGACGGGGGTTGTGTGCTACGCCTGCAGAACTGCCAGTACCCTGCTGCTCTATCAAGAATTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
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| 3UTR GCA 72 bp | CCTGCAGTTTTTCTACATTCCTGTCTCTTGGATGCGTaGCTTCTTGATGTGCCCAGGTGTCGGCCAGCAAGC | + |
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Preference number: 3 (lower is better) Translates to: PAVFLHSCLLDA*LLDVPRCRPAS Trigger: GCTTGCTGGCCGACACCTGGGCACATCAAGAAGGCACGCATCCAAGAGACAGGAATGTAGAAAAACTGCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
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| 3UTR CCA 72 bp | CCTTTCGCATTAATTCTTGATAGAGCAGCAGGGTACTaGCAGTTCTGCAGGCGTAGCACACAACCCCCGTCA | + |
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Preference number: 3 (lower is better) Translates to: PFALILDRAAGY*QFCRRSTQPPS Trigger: TGACGGGGGTTGTGTGCTACGCCTGCAGAACTGCCAGTACCCTGCTGCTCTATCAAGAATTAATGCGAAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
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| 3UTR CCA 72 bp | CAACAGGACCTGCAGTTTTTCTACATTCCTGTCTCTTaGATGCGTGCCTTCTTGATGTGCCCAGGTGTCGGC | + |
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Preference number: 3 (lower is better) Translates to: QQDLQFFYIPVS*MRAFLMCPGVG Trigger: GCCGACACCTGGGCACATCAAGAAGGCACGCATCCAAGAGACAGGAATGTAGAAAAACTGCAGGTCCTGTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
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| 3UTR-3UTR CAA 90 bp | TCCAACACTCCACAGATCAACGGTAGCCCCGTACTTCTTCTGATGGTCCTTTCTATGACGCGCATGATGTaGCCTGGCTTGATATCTCGG | + |
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Preference number: 3 (lower is better) Translates to: SNTPQINGSPVLLLMVLSMTRMM*PGLISR Trigger: CCGAGATATCAAGCCAGGCAACATCATGCGCGTCAT...AGAAAGGACCATCAGAAGAAGTACGGGGCTACCGTTGATCTGTGGAGTGTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
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| 3UTR GCA 72 bp | CCCTTTCATACATGTCCGGATGCAGGTACTCTTCTGTaGCGTACAGAGACACAAACTGCTCATCGTCCTCCA | + |
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Preference number: 3 (lower is better) Translates to: PFHTCPDAGTLL*RTETQTAHRPP Trigger: TGGAGGACGATGAGCAGTTTGTGTCTCTGTACGGCACAGAAGAGTACCTGCATCCGGACATGTATGAAAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
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| 3UTR CCA 72 bp | GATAATGCCACTTTATCCTTGTCAGGGAACCGACTGTaGTTAAACCGCGGTTCTGTTCCCGTCACAAAGCCC | + |
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Preference number: 3 (lower is better) Translates to: DNATLSLSGNRL*LNRGSVPVTKP Trigger: GGGCTTTGTGACGGGAACAGAACCGCGGTTTAACCACAGTCGGTTCCCTGACAAGGATAAAGTGGCATTATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020316.4 ENSMUST00000219400.2 |
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| 3UTR-3UTR CAA 90 bp | GTTCTGTTCCCGTCACAAAGCCCTGTGTCTCCTCCAGTTACACTGTGTCGACTATTATACATTACTTCTTaGTTCCTCCGAGGCCCCTCG | + |
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Preference number: 3 (lower is better) Translates to: VLFPSQSPVSPPVTLCRLLYITS*FLRGPS Trigger: CGAGGGGCCTCGGAGGAACAAAGAAGTAATGTATAA...TAGTCGACACAGTGTAACTGGAGGAGACACAGGGCTTTGTGACGGGAACAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
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| 3UTR-3UTR CAA 90 bp | AATGCCACTTTATCCTTGTCAGGGAACCGACTGTGGTTAAACCGCGGTTCTGTTTCTGTACTCCAGATATaGCACCAGACGGCTTCCCAG | + |
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Preference number: 3 (lower is better) Translates to: NATLSLSGNRLWLNRGSVSVLQI*HQTASQ Trigger: CTGGGAAGCCGTCTGGTGCAATATCTGGAGTACAGA...AACAGAACCGCGGTTTAACCACAGTCGGTTCCCTGACAAGGATAAAGTGGCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
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| 3UTR-3UTR CAA 90 bp | CGCGGTTCTGTTCCCGTCACAAAGCCCTGTGTCTCCTCCAGTTACACTGTGTCGAGTGGCTCATTGCTTTaGTGGCATGGTAATACAATT | + |
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Preference number: 3 (lower is better) Translates to: RGSVPVTKPCVSSSYTVSSGSLL*WHGNTI Trigger: AATTGTATTACCATGCCACAAAAGCAATGAGCCACT...CGACACAGTGTAACTGGAGGAGACACAGGGCTTTGTGACGGGAACAGAACCGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
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| 3UTR TCA 72 bp | ACACTCCACAGATCAACGGTAGCCCCGTACTTCTTCTaGTGGTCCTTTCTTAGCACTGCCCTTTCATACATG | + |
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Preference number: 3 (lower is better) Translates to: TLHRSTVAPYFF*WSFLSTALSYM Trigger: CATGTATGAAAGGGCAGTGCTAAGAAAGGACCATCAGAAGAAGTACGGGGCTACCGTTGATCTGTGGAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
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| 3UTR-3UTR CAA 90 bp | TGCCACTTTATCCTTGTCAGGGAACCGACTGTGGTTAAACCGCGGTTCTGTTCCGAGGTCAATCTGTCTTaGTTACAGCAGCCAAAATTC | + |
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Preference number: 3 (lower is better) Translates to: CHFILVREPTVVKPRFCSEVNLS*LQQPKF Trigger: GAATTTTGGCTGCTGTAACAAAGACAGATTGACCTC...GGAACAGAACCGCGGTTTAACCACAGTCGGTTCCCTGACAAGGATAAAGTGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020316.4 ENSMUST00000219400.2 |
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| 3UTR-3UTR CAA 90 bp | AATAATTCACCTAAAATCAAACATCCGAGGAAAACTGAGATTTGGGCACCCGGTCCGAAATCCGTGAGTTaGTACACAGACTGGCCGTCC | + |
|
Preference number: 3 (lower is better) Translates to: NNSPKIKHPRKTEIWAPGPKSVS*YTDWPS Trigger: GGACGGCCAGTCTGTGTACAAACTCACGGATTTCGG...ACCGGGTGCCCAAATCTCAGTTTTCCTCGGATGTTTGATTTTAGGTGAATTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
||
| 3UTR TCA 72 bp | AGCACTGGCTGGTCATGGCTTTCTTCTACAGCTCGCTaGGGTCAATCTGTCTTTGTTACAGCAGCCAAAATT | + |
|
Preference number: 3 (lower is better) Translates to: STGWSWLSSTAR*GQSVFVTAAKI Trigger: AATTTTGGCTGCTGTAACAAAGACAGATTGACCTCAGCGAGCTGTAGAAGAAAGCCATGACCAGCCAGTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020316.4 ENSMUST00000219400.2 |
||
| 3UTR TCA 72 bp | ATCCGAGGAAAACTGAGATTTGGGCACCCGGTCAAATaGGATAATGCCACTTTATCCTTGTCAGGGAACCGA | + |
|
Preference number: 3 (lower is better) Translates to: IRGKLRFGHPVK*DNATLSLSGNR Trigger: TCGGTTCCCTGACAAGGATAAAGTGGCATTATCTCATTTGACCGGGTGCCCAAATCTCAGTTTTCCTCGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020316.4 ENSMUST00000219400.2 |
||
| 3UTR TCA 72 bp | TGTCTGAAATCTCACCCAGCTCTGCGGCTTCCAGGTTaGCCTTCATCAACTTCTCATACACTTTCACAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: CLKSHPALRLPG*PSSTSHTLSQS Trigger: AGACTGTGAAAGTGTATGAGAAGTTGATGAAGGTCAACCTGGAAGCCGCAGAGCTGGGTGAGATTTCAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
||
| 3UTR CCA 72 bp | CTTCTCCTGATCAGCTTCAAGTATGTTTGCAAGAACTaGGGTAAGCAGTGCCTGAAGACCCTGAGAAAGACT | + |
|
Preference number: 3 (lower is better) Translates to: LLLISFKYVCKN*GKQCLKTLRKT Trigger: AGTCTTTCTCAGGGTCTTCAGGCACTGCTTACCCCAGTTCTTGCAAACATACTTGAAGCTGATCAGGAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCAATAATTCACCTAAAATCAAACATCCGAGGAAAACTGAGATTTGGGCACCCCCCAGTGTTATCTTCTaGTGCAAACTAGAACTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: LNNSPKIKHPRKTEIWAPPSVIF*CKLELP Trigger: GGGAAGTTCTAGTTTGCACAAGAAGATAACACTGGG...GGGTGCCCAAATCTCAGTTTTCCTCGGATGTTTGATTTTAGGTGAATTATTGAG 42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000020316.4 ENSMUST00000219400.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCTCCTCCAGTTACACTGTGTCGACTATCAGTCCTTTCAAAATTTTAAGAATGATGATGTTGCCTGGCTaGATATCTCGGTGCACTATG | + |
|
Preference number: 3 (lower is better) Translates to: VSSSYTVSTISPFKILRMMMLPG*ISRCTM Trigger: CATAGTGCACCGAGATATCAAGCCAGGCAACATCAT...CATTCTTAAAATTTTGAAAGGACTGATAGTCGACACAGTGTAACTGGAGGAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGCTCAATAATTCACCTAAAATCAAACATCCGAGGAAAACTGAGATTTGGGCACCCAGTGTTATCTTCTaGTGCAAACTAGAACTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: LLNNSPKIKHPRKTEIWAPSVIF*CKLELP Trigger: GGGAAGTTCTAGTTTGCACAAGAAGATAACACTGGG...TGCCCAAATCTCAGTTTTCCTCGGATGTTTGATTTTAGGTGAATTATTGAGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020316.4 ENSMUST00000219400.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGCTCAATAATTCACCTAAAATCAAACATCCGAGGAAAACTGAGATTTGGGCAGAGGTCAATCTGTCTTaGTTACAGCAGCCAAAATTC | + |
|
Preference number: 3 (lower is better) Translates to: LLNNSPKIKHPRKTEIWAEVNLS*LQQPKF Trigger: GAATTTTGGCTGCTGTAACAAAGACAGATTGACCTC...TGCCCAAATCTCAGTTTTCCTCGGATGTTTGATTTTAGGTGAATTATTGAGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020316.4 ENSMUST00000219400.2 |
||
| 3UTR CAA 72 bp | TCCTCCAGCTCTCGAGCGGCGCCGAAATCCGTGAGTTaGTACACAGACTGGCCGTCCTCCCCTATGACGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SSSSRAAPKSVS*YTDWPSSPMTR Trigger: GCGCGTCATAGGGGAGGACGGCCAGTCTGTGTACAAACTCACGGATTTCGGCGCCGCTCGAGAGCTGGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
||
| CDS-3UTR TCA 90 bp | CGCGGTTCTGTTCCCGTCACAAAGCCCTGTGTCTCCTCCAGTTACACTGTGTCGCGGCGCCGAAATCCGTaGGTTTGTACACAGACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RGSVPVTKPCVSSSYTVSRRRNP*VCTQTG Trigger: GCCAGTCTGTGTACAAACTCACGGATTTCGGCGCCG...CGACACAGTGTAACTGGAGGAGACACAGGGCTTTGTGACGGGAACAGAACCGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
||
| CDS-3UTR CCA 90 bp | CCCGTCACAAAGCCCTGTGTCTCCTCCAGTTACACTGTGTCGACTATCAGTCCTGGCCAGCAAGCCCCCTaGAGACAGCCTGCTGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PVTKPCVSSSYTVSTISPGQQAP*RQPAAD Trigger: ATCAGCAGCAGGCTGTCTCCAGGGGGCTTGCTGGCC...AGGACTGATAGTCGACACAGTGTAACTGGAGGAGACACAGGGCTTTGTGACGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
||
| CDS-3UTR GCA 90 bp | CCCAAAGCACTGGCTGGTCATGGCTTTCTTCTACAGCTCGCTGAGGTCAATCTGTCACTGCCTTGGCCATaGTGGCGTCCCCATCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PKALAGHGFLLQLAEVNLSLPWP*WRPHPD Trigger: ATCTGGATGGGGACGCCAGCATGGCCAAGGCAGTGA...CAGATTGACCTCAGCGAGCTGTAGAAGAAAGCCATGACCAGCCAGTGCTTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
||
| CDS-3UTR CCA 90 bp | ACCCCAAAGCACTGGCTGGTCATGGCTTTCTTCTACAGCTCGCTGAGGTCAATCCTGCCTTGGCCATGCTaGCGTCCCCATCCAGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: TPKHWLVMAFFYSSLRSILPWPC*RPHPDH Trigger: ATGATCTGGATGGGGACGCCAGCATGGCCAAGGCAG...GATTGACCTCAGCGAGCTGTAGAAGAAAGCCATGACCAGCCAGTGCTTTGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
||
| 3UTR CAA 72 bp | TTTTTCTACATTCCTGTCTCTTGGATGCGTGCCTTCTaGATGTGCCCAGGTGTCGGCCAGCAAGCCCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FFYIPVSWMRAF*MCPGVGQQAPW Trigger: CCAGGGGGCTTGCTGGCCGACACCTGGGCACATCAAGAAGGCACGCATCCAAGAGACAGGAATGTAGAAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
||
| CDS-3UTR CCA 90 bp | AGTTCTGCAGGCGTAGCACACAACCCCCGTCACTGCCTTGGCCATGCTGGCGTCCATTTGAACATCCACTaGGCGAAGGAAGCTTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSAGVAHNPRHCLGHAGVHLNIH*AKEAYV Trigger: AACATAAGCTTCCTTCGCCCAGTGGATGTTCAAATG...GACGCCAGCATGGCCAAGGCAGTGACGGGGGTTGTGTGCTACGCCTGCAGAACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
||
| CDS-3UTR TCA 90 bp | ACTGTGGTTAAACCGCGGTTCTGTTCCCGTCACAAAGCCCTGTGTCTCCTCCAGGCCCCGTACTTCTTCTaGTGGTCCTTTCTTAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: TVVKPRFCSRHKALCLLQAPYFF*WSFLST Trigger: AGTGCTAAGAAAGGACCATCAGAAGAAGTACGGGGC...CTGGAGGAGACACAGGGCTTTGTGACGGGAACAGAACCGCGGTTTAACCACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
||
| CDS-3UTR GCA 90 bp | GGTGTTCATTTCGTGCCCCAGTGTTATCTTCTTGTGCAAACTAGAACTTCCCAGGACGCCGCCGGAGGCTaGGAGCATTTTCTGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GVHFVPQCYLLVQTRTSQDAAGG*EHFLRQ Trigger: CTGCCTCAGAAAATGCTCGCAGCCTCCGGCGGCGTC...CTGGGAAGTTCTAGTTTGCACAAGAAGATAACACTGGGGCACGAAATGAACACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
||
| CDS-3UTR GCA 90 bp | CGCGGTTCTGTTCCCGTCACAAAGCCCTGTGTCTCCTCCAGTTACACTGTGTCGAAAGACAGTCCACATTaGGAAGGCCACCATCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: RGSVPVTKPCVSSSYTVSKDSPH*EGHHPL Trigger: CAATGGATGGTGGCCTTCGCAATGTGGACTGTCTTT...CGACACAGTGTAACTGGAGGAGACACAGGGCTTTGTGACGGGAACAGAACCGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
||
| CDS-3UTR TCA 90 bp | ACCCCAAAGCACTGGCTGGTCATGGCTTTCTTCTACAGCTCGCTGAGGTCAATCCTGCGGCTTCCAGGTTaGCCTTCATCAACTTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TPKHWLVMAFFYSSLRSILRLPG*PSSTSH Trigger: ATGAGAAGTTGATGAAGGTCAACCTGGAAGCCGCAG...GATTGACCTCAGCGAGCTGTAGAAGAAAGCCATGACCAGCCAGTGCTTTGGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
||
| CDS-3UTR GCA 90 bp | TTCCCGTCACAAAGCCCTGTGTCTCCTCCAGTTACACTGTGTCGACTATCAGTCAATCTCACCCAGCTCTaGGGCTTCCAGGTTGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: FPSQSPVSPPVTLCRLSVNLTQL*GFQVDL Trigger: AAGGTCAACCTGGAAGCCGCAGAGCTGGGTGAGATT...GACTGATAGTCGACACAGTGTAACTGGAGGAGACACAGGGCTTTGTGACGGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
||
| CDS-3UTR GCA 90 bp | TTCCCGTCACAAAGCCCTGTGTCTCCTCCAGTTACACTGTGTCGACTATCAGTCTGTCTCTTGGATGCGTaGCTTCTTGATGTGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FPSQSPVSPPVTLCRLSVCLLDA*LLDVPR Trigger: CCTGGGCACATCAAGAAGGCACGCATCCAAGAGACA...GACTGATAGTCGACACAGTGTAACTGGAGGAGACACAGGGCTTTGTGACGGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
||
| CDS-3UTR CCA 90 bp | AATGCCACTTTATCCTTGTCAGGGAACCGACTGTGGTTAAACCGCGGTTCTGTTACGGCAGCGACCCCGTaGCTGCATGGTAGAATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: NATLSLSGNRLWLNRGSVTAATP*LHGRMS Trigger: TGACATTCTACCATGCAGCCACGGGGTCGCTGCCGT...AACAGAACCGCGGTTTAACCACAGTCGGTTCCCTGACAAGGATAAAGTGGCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
||
| CDS-3UTR TCA 90 bp | ACTGTGGTTAAACCGCGGTTCTGTTCCCGTCACAAAGCCCTGTGTCTCCTCCAGCTTTCTATTGTTCCCTaGGAACTGGAAAGTCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TVVKPRFCSRHKALCLLQLSIVP*ELESLS Trigger: GCTGAGACTTTCCAGTTCTCAGGGAACAATAGAAAG...CTGGAGGAGACACAGGGCTTTGTGACGGGAACAGAACCGCGGTTTAACCACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
||
| CDS-3UTR TCA 90 bp | ACTGTGGTTAAACCGCGGTTCTGTTCCCGTCACAAAGCCCTGTGTCTCCTCCAGAGCTGCTTCCTAAGATaGAGCATCTTTCTCATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TVVKPRFCSRHKALCLLQSCFLR*SIFLIH Trigger: GTGGATGAGAAAGATGCTTCATCTTAGGAAGCAGCT...CTGGAGGAGACACAGGGCTTTGTGACGGGAACAGAACCGCGGTTTAACCACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
||
| CDS-3UTR TCA 90 bp | CCCGTCACAAAGCCCTGTGTCTCCTCCAGTTACACTGTGTCGACTATCAGTCCTGCTGCGAGCATTTTCTaGGGCAGAGTTTCTTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: PVTKPCVSSSYTVSTISPAASIF*GRVSCN Trigger: GTTACAAGAAACTCTGCCTCAGAAAATGCTCGCAGC...AGGACTGATAGTCGACACAGTGTAACTGGAGGAGACACAGGGCTTTGTGACGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
||
| CDS-3UTR GCA 90 bp | GGTGTTCATTTCGTGCCCCAGTGTTATCTTCTTGTGCAAACTAGAACTTCCCAGCAGCGACCCCGTGGCTaGATGGTAGAATGTCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: GVHFVPQCYLLVQTRTSQQRPRG*MVECHS Trigger: GGAGTGACATTCTACCATGCAGCCACGGGGTCGCTG...CTGGGAAGTTCTAGTTTGCACAAGAAGATAACACTGGGGCACGAAATGAACACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
||
| 3UTR CAA 72 bp | TCAACAGGACCTGCAGTTTTTCTACATTCCTGTCTCTaGGATGCGTGCCTTCTTGATGTGCCCAGGTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: STGPAVFLHSCL*DACLLDVPRCR Trigger: CCGACACCTGGGCACATCAAGAAGGCACGCATCCAAGAGACAGGAATGTAGAAAAACTGCAGGTCCTGTTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
||
| CDS-3UTR TCA 90 bp | TTCCCGTCACAAAGCCCTGTGTCTCCTCCAGTTACACTGTGTCGACTATCAGTCCCCCAGCACTTCTCCTaGTCAGCTTCAAGTATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FPSQSPVSPPVTLCRLSVPQHFS*SASSMF Trigger: AAACATACTTGAAGCTGATCAGGAGAAGTGCTGGGG...GACTGATAGTCGACACAGTGTAACTGGAGGAGACACAGGGCTTTGTGACGGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
||
| CDS-3UTR GCA 90 bp | TTCCCGTCACAAAGCCCTGTGTCTCCTCCAGTTACACTGTGTCGACTATCAGTCGTGGTTTTAGGAAAATaGTGGGCTAGTCGTCCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: FPSQSPVSPPVTLCRLSVVVLGK*WASRPS Trigger: ACTCGGACGACTAGCCCAGCATTTTCCTAAAACCAC...GACTGATAGTCGACACAGTGTAACTGGAGGAGACACAGGGCTTTGTGACGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
||
| CDS-3UTR CCA 90 bp | TCTGTTCCCGTCACAAAGCCCTGTGTCTCCTCCAGTTACACTGTGTCGACTATCTTGTTCCCTGAGAACTaGAAAGTCTCAGCAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SVPVTKPCVSSSYTVSTILFPEN*KVSAAW Trigger: CCAAGCTGCTGAGACTTTCCAGTTCTCAGGGAACAA...GATAGTCGACACAGTGTAACTGGAGGAGACACAGGGCTTTGTGACGGGAACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
||
| CDS-3UTR CCA 90 bp | GGTGTTCATTTCGTGCCCCAGTGTTATCTTCTTGTGCAAACTAGAACTTCCCAGGCGCATGATGTTGCCTaGCTTGATATCTCGGTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GVHFVPQCYLLVQTRTSQAHDVA*LDISVH Trigger: GTGCACCGAGATATCAAGCCAGGCAACATCATGCGC...CTGGGAAGTTCTAGTTTGCACAAGAAGATAACACTGGGGCACGAAATGAACACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
||
| CDS-3UTR CCA 90 bp | GTTCTGTTCCCGTCACAAAGCCCTGTGTCTCCTCCAGTTACACTGTGTCGACTAGTTTTAGGAAAATGCTaGGCTAGTCGTCCGAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VLFPSQSPVSPPVTLCRLVLGKC*ASRPSS Trigger: AGAACTCGGACGACTAGCCCAGCATTTTCCTAAAAC...TAGTCGACACAGTGTAACTGGAGGAGACACAGGGCTTTGTGACGGGAACAGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
||
| CDS-3UTR CCA 90 bp | CCCAAAGCACTGGCTGGTCATGGCTTTCTTCTACAGCTCGCTGAGGTCAATCTGATCCAGATCATAGCGTaGATGTATTTTAGGGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PKALAGHGFLLQLAEVNLIQIIA*MYFREG Trigger: TCCCTCCCTAAAATACATCCACGCTATGATCTGGAT...CAGATTGACCTCAGCGAGCTGTAGAAGAAAGCCATGACCAGCCAGTGCTTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
||
| CDS-3UTR GCA 90 bp | TGCCACTTTATCCTTGTCAGGGAACCGACTGTGGTTAAACCGCGGTTCTGTTCCAGCTTCAAGTATGTTTaGAAGAACTGGGGTAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CHFILVREPTVVKPRFCSSFKYV*KNWGKQ Trigger: CTGCTTACCCCAGTTCTTGCAAACATACTTGAAGCT...GGAACAGAACCGCGGTTTAACCACAGTCGGTTCCCTGACAAGGATAAAGTGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
||
| CDS-3UTR GCA 90 bp | CGCGGTTCTGTTCCCGTCACAAAGCCCTGTGTCTCCTCCAGTTACACTGTGTCGCATTATAAGCTAGTCTaGGTTCTGCTTTGTCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RGSVPVTKPCVSSSYTVSHYKLV*VLLCLF Trigger: AAAAAGACAAAGCAGAACGCAGACTAGCTTATAATG...CGACACAGTGTAACTGGAGGAGACACAGGGCTTTGTGACGGGAACAGAACCGCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
||
| CDS-3UTR CCA 90 bp | GATAATGCCACTTTATCCTTGTCAGGGAACCGACTGTGGTTAAACCGCGGTTCTGGTGAAGCACATCACTaGTCTCTGCAAAGAACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: DNATLSLSGNRLWLNRGSGEAHH*SLQRTG Trigger: ACCAGTTCTTTGCAGAGACCAGTGATGTGCTTCACC...AGAACCGCGGTTTAACCACAGTCGGTTCCCTGACAAGGATAAAGTGGCATTATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
||
| CDS-3UTR TCA 90 bp | GGTGTTCATTTCGTGCCCCAGTGTTATCTTCTTGTGCAAACTAGAACTTCCCAGTGCAGAAATCCAGTGTaGTCACTACCTCCGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GVHFVPQCYLLVQTRTSQCRNPV*SLPPSS Trigger: AGAAGACGGAGGTAGTGATCACACTGGATTTCTGCA...CTGGGAAGTTCTAGTTTGCACAAGAAGATAACACTGGGGCACGAAATGAACACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
||
| CDS-3UTR TCA 90 bp | ATAATTCACCTAAAATCAAACATCCGAGGAAAACTGAGATTTGGGCACCCGGTCGAGACAGCCTGCTGCTaGTGTCCTGAAGACTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: IIHLKSNIRGKLRFGHPVETACC*CPEDCF Trigger: AAAGCAGTCTTCAGGACATCAGCAGCAGGCTGTCTC...GACCGGGTGCCCAAATCTCAGTTTTCCTCGGATGTTTGATTTTAGGTGAATTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
||
| CDS-3UTR GCA 90 bp | CAGCTCGCTGAGGTCAATCTGTCTTTGTTACAGCAGCCAAAATTCATATATATAGGGTACTGGCAGTTCTaGAGGCGTAGCACACAACCC | + |
|
Preference number: 4 (lower is better) Translates to: QLAEVNLSLLQQPKFIYIGYWQF*RRSTQP Trigger: GGGTTGTGTGCTACGCCTGCAGAACTGCCAGTACCC...TATATATATGAATTTTGGCTGCTGTAACAAAGACAGATTGACCTCAGCGAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
||
| CDS-3UTR GCA 90 bp | TGTAGAAATAAGAACTCCATTCACAAAGGTGTTCATTTCGTGCCCCAGTGTTATCGTGCCTTCTTGATGTaGCCAGGTGTCGGCCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: CRNKNSIHKGVHFVPQCYRAFLM*PGVGQQ Trigger: TTGCTGGCCGACACCTGGGCACATCAAGAAGGCACG...ATAACACTGGGGCACGAAATGAACACCTTTGTGAATGGAGTTCTTATTTCTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
||
| CDS-3UTR CCA 90 bp | ATAATTCACCTAAAATCAAACATCCGAGGAAAACTGAGATTTGGGCACCCGGTCAGTTTGTACACAGACTaGCCGTCCTCCCCTATGACG | + |
|
Preference number: 4 (lower is better) Translates to: IIHLKSNIRGKLRFGHPVSLYTD*PSSPMT Trigger: CGTCATAGGGGAGGACGGCCAGTCTGTGTACAAACT...GACCGGGTGCCCAAATCTCAGTTTTCCTCGGATGTTTGATTTTAGGTGAATTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
||
| CDS-3UTR CCA 90 bp | TGCCACTTTATCCTTGTCAGGGAACCGACTGTGGTTAAACCGCGGTTCTGTTCCAAAGTCTCAGCAGCTTaGTGTGTATGTCTGAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: CHFILVREPTVVKPRFCSKVSAA*CVCLKS Trigger: AGATTTCAGACATACACACCAAGCTGCTGAGACTTT...GGAACAGAACCGCGGTTTAACCACAGTCGGTTCCCTGACAAGGATAAAGTGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
||
| 3UTR CAA 72 bp | ATGTCTGAAATCTCACCCAGCTCTGCGGCTTCCAGGTaGACCTTCATCAACTTCTCATACACTTTCACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: MSEISPSSAASR*TFINFSYTFTV Trigger: GACTGTGAAAGTGTATGAGAAGTTGATGAAGGTCAACCTGGAAGCCGCAGAGCTGGGTGAGATTTCAGACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
||
| CDS-3UTR TCA 90 bp | ATAATTCACCTAAAATCAAACATCCGAGGAAAACTGAGATTTGGGCACCCGGTCCTTGGTGTGTATGTCTaGAATCTCACCCAGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IIHLKSNIRGKLRFGHPVLGVYV*NLTQLC Trigger: GCAGAGCTGGGTGAGATTTCAGACATACACACCAAG...GACCGGGTGCCCAAATCTCAGTTTTCCTCGGATGTTTGATTTTAGGTGAATTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
||
| CDS-3UTR GCA 90 bp | AAGTGTAGAAATAAGAACTCCATTCACAAAGGTGTTCATTTCGTGCCCCAGTGTGGCTTGATATCTCGGTaGACTATGCCGTTCTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: KCRNKNSIHKGVHFVPQCGLISR*TMPFSR Trigger: CCGAGAGAACGGCATAGTGCACCGAGATATCAAGCC...ACACTGGGGCACGAAATGAACACCTTTGTGAATGGAGTTCTTATTTCTACACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
||
| 3UTR CAA 72 bp | ACAAAGGTGTTCATTTCGTGCCCCAGTGTTATCTTCTaGTGCAAACTAGAACTTCCCAGACTCCCTAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TKVFISCPSVIF*CKLELPRLPRK Trigger: CTTCCTAGGGAGTCTGGGAAGTTCTAGTTTGCACAAGAAGATAACACTGGGGCACGAAATGAACACCTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020316.4 ENSMUST00000219400.2 |
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| CDS-3UTR GCA 90 bp | AATAATTCACCTAAAATCAAACATCCGAGGAAAACTGAGATTTGGGCACCCGGTAACTGGGGTAAGCAGTaGCTGAAGACCCTGAGAAAG | + |
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Preference number: 4 (lower is better) Translates to: NNSPKIKHPRKTEIWAPGNWGKQ*LKTLRK Trigger: CTTTCTCAGGGTCTTCAGGCACTGCTTACCCCAGTT...ACCGGGTGCCCAAATCTCAGTTTTCCTCGGATGTTTGATTTTAGGTGAATTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
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| CDS-3UTR CCA 90 bp | GGTGTTCATTTCGTGCCCCAGTGTTATCTTCTTGTGCAAACTAGAACTTCCCAGCATTCTTCTGAGAAGTaGCTCATTGCTTTTGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: GVHFVPQCYLLVQTRTSQHSSEK*LIAFVA Trigger: TGCCACAAAAGCAATGAGCCACTTCTCAGAAGAATG...CTGGGAAGTTCTAGTTTGCACAAGAAGATAACACTGGGGCACGAAATGAACACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
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| CDS-3UTR CCA 90 bp | TGCCACTTTATCCTTGTCAGGGAACCGACTGTGGTTAAACCGCGGTTCTGTTCCTATAGTCTTGATACTTaGACACTTCCTCTTCGATAT | + |
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Preference number: 4 (lower is better) Translates to: CHFILVREPTVVKPRFCSYSLDT*TLPLRY Trigger: ATATCGAAGAGGAAGTGTCCAAGTATCAAGACTATA...GGAACAGAACCGCGGTTTAACCACAGTCGGTTCCCTGACAAGGATAAAGTGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
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| CDS-3UTR TCA 90 bp | GATAATGCCACTTTATCCTTGTCAGGGAACCGACTGTGGTTAAACCGCGGTTCTCATCTCGTAAGACAATaGGAAATTCTGATTCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: DNATLSLSGNRLWLNRGSHLVRQ*EILILE Trigger: TTCCAGAATCAGAATTTCTCATTGTCTTACGAGATG...AGAACCGCGGTTTAACCACAGTCGGTTCCCTGACAAGGATAAAGTGGCATTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
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| CDS-3UTR GCA 90 bp | AATAATTCACCTAAAATCAAACATCCGAGGAAAACTGAGATTTGGGCACCCGGTTATCTCGGTGCACTATaGCGTTCTCTCGGAGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: NNSPKIKHPRKTEIWAPGYLGAL*RSLGDD Trigger: ATCATCTCCGAGAGAACGGCATAGTGCACCGAGATA...ACCGGGTGCCCAAATCTCAGTTTTCCTCGGATGTTTGATTTTAGGTGAATTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
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| CDS-3UTR GCA 90 bp | CAGCTCGCTGAGGTCAATCTGTCTTTGTTACAGCAGCCAAAATTCATATATATACTGTACTCCAGATATTaGACCAGACGGCTTCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: QLAEVNLSLLQQPKFIYILYSRY*TRRLPS Trigger: ACTGGGAAGCCGTCTGGTGCAATATCTGGAGTACAG...TATATATATGAATTTTGGCTGCTGTAACAAAGACAGATTGACCTCAGCGAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
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| CDS-3UTR CCA 90 bp | ATAATTCACCTAAAATCAAACATCCGAGGAAAACTGAGATTTGGGCACCCGGTCCATTTGAACATCCACTaGGCGAAGGAAGCTTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: IIHLKSNIRGKLRFGHPVHLNIH*AKEAYV Trigger: AACATAAGCTTCCTTCGCCCAGTGGATGTTCAAATG...GACCGGGTGCCCAAATCTCAGTTTTCCTCGGATGTTTGATTTTAGGTGAATTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020316.4 ENSMUST00000219400.2 |
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| CDS-3UTR CCA 90 bp | TTCACAAAGGTGTTCATTTCGTGCCCCAGTGTTATCTTCTTGTGCAAACTAGAATCCACTCCAGTCAATTaGTCCGTTTTCTGCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FTKVFISCPSVIFLCKLESTPVN*SVFCFL Trigger: CAGAAAGCAGAAAACGGACCAATTGACTGGAGTGGA...TTCTAGTTTGCACAAGAAGATAACACTGGGGCACGAAATGAACACCTTTGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
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| CDS-3UTR CCA 90 bp | CTCAATAATTCACCTAAAATCAAACATCCGAGGAAAACTGAGATTTGGGCACCCTATGTTTGCAAGAACTaGGGTAAGCAGTGCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LNNSPKIKHPRKTEIWAPYVCKN*GKQCLK Trigger: CTTCAGGCACTGCTTACCCCAGTTCTTGCAAACATA...GGGTGCCCAAATCTCAGTTTTCCTCGGATGTTTGATTTTAGGTGAATTATTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
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| CDS-3UTR TCA 90 bp | AATAATTCACCTAAAATCAAACATCCGAGGAAAACTGAGATTTGGGCACCCGGTGATAGTAAATCTCTGTaGTGCAGTTCAACAGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: NNSPKIKHPRKTEIWAPGDSKSL*CSSTGP Trigger: AGGTCCTGTTGAACTGCATCACAGAGATTTACTATC...ACCGGGTGCCCAAATCTCAGTTTTCCTCGGATGTTTGATTTTAGGTGAATTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
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| CDS-3UTR TCA 90 bp | AAGTGTAGAAATAAGAACTCCATTCACAAAGGTGTTCATTTCGTGCCCCAGTGTTCTAACACATTCTTCTaGGAAGTGGCTCATTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: KCRNKNSIHKGVHFVPQCSNTFF*EVAHCF Trigger: AAAGCAATGAGCCACTTCTCAGAAGAATGTGTTAGA...ACACTGGGGCACGAAATGAACACCTTTGTGAATGGAGTTCTTATTTCTACACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
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| CDS-3UTR CCA 90 bp | TTGCTCAATAATTCACCTAAAATCAAACATCCGAGGAAAACTGAGATTTGGGCATACATTCCTGTCTCTTaGATGCGTGCCTTCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LLNNSPKIKHPRKTEIWAYIPVS*MRAFLM Trigger: CATCAAGAAGGCACGCATCCAAGAGACAGGAATGTA...TGCCCAAATCTCAGTTTTCCTCGGATGTTTGATTTTAGGTGAATTATTGAGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
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| 3UTR CAA 72 bp | GCTAAAGACAGTCCACATTGCGAAGGCCACCATCCATaGTTAAAGACCCAAACCTTTCTAAAATATGATTGT | + |
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Preference number: 4 (lower is better) Translates to: AKDSPHCEGHHP*LKTQTFLKYDC Trigger: ACAATCATATTTTAGAAAGGTTTGGGTCTTTAACAATGGATGGTGGCCTTCGCAATGTGGACTGTCTTTAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
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| CDS CCA 90 bp | CCAGTTTTCTTATGCCTTCCTCGGAAGACATTTGCAGTGGCCCCCTaGCCTAGGATATCAGACAGGAGCCACAGATGGTTGGAGGTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PVFLCLPRKTFAVAP*PRISDRSHRWLEVL Trigger: GAGCACCTCCAACCATCTGTGGCTCCTGTCTGATATCCTAGGCCAGGGGGCCACTGCAAATGTCTTCCGAGGAAGGCATAAGAAAACTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020316.4 ENSMUST00000219400.2 |
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| CDS CCA 90 bp | AGAGATCACCAGTTTTCTTATGCCTTCCTCGGAAGACATTTGCAGTaGCCCCCTGGCCTAGGATATCAGACAGGAGCCACAGATGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: RDHQFSYAFLGRHLQ*PPGLGYQTGATDGW Trigger: CCAACCATCTGTGGCTCCTGTCTGATATCCTAGGCCAGGGGGCCACTGCAAATGTCTTCCGAGGAAGGCATAAGAAAACTGGTGATCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020316.4 ENSMUST00000219400.2 |
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| CDS-3UTR CAA 90 bp | CGCGGTTCTGTTCCCGTCACAAAGCCCTGTGTCTCCTCCAGTTACACTGTGTCGTTCAAATTCTCTCATTaGAACATCCACTGGGCGAAG | + |
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Preference number: 5 (lower is better) Translates to: RGSVPVTKPCVSSSYTVSFKFSH*NIHWAK Trigger: CTTCGCCCAGTGGATGTTCAAATGAGAGAATTTGAA...CGACACAGTGTAACTGGAGGAGACACAGGGCTTTGTGACGGGAACAGAACCGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020316.4 ENSMUST00000219400.2 |
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| CDS-3UTR CAA 90 bp | TGTAGAAATAAGAACTCCATTCACAAAGGTGTTCATTTCGTGCCCCAGTGTTATACCCCCGTCACTGCCTaGGCCATGCTGGCGTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: CRNKNSIHKGVHFVPQCYTPVTA*AMLASP Trigger: TGGGGACGCCAGCATGGCCAAGGCAGTGACGGGGGT...ATAACACTGGGGCACGAAATGAACACCTTTGTGAATGGAGTTCTTATTTCTACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
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| CDS-3UTR CAA 90 bp | TGCCACTTTATCCTTGTCAGGGAACCGACTGTGGTTAAACCGCGGTTCTGTTCCATGATGTTGCCTGGCTaGATATCTCGGTGCACTATG | + |
|
Preference number: 5 (lower is better) Translates to: CHFILVREPTVVKPRFCSMMLPG*ISRCTM Trigger: CATAGTGCACCGAGATATCAAGCCAGGCAACATCAT...GGAACAGAACCGCGGTTTAACCACAGTCGGTTCCCTGACAAGGATAAAGTGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
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| CDS-3UTR CAA 90 bp | CCCGTCACAAAGCCCTGTGTCTCCTCCAGTTACACTGTGTCGACTATCAGTCCTGAAAGTCTCAGCAGCTaGGTGTGTATGTCTGAAATC | + |
|
Preference number: 5 (lower is better) Translates to: PVTKPCVSSSYTVSTISPESLSS*VCMSEI Trigger: GATTTCAGACATACACACCAAGCTGCTGAGACTTTC...AGGACTGATAGTCGACACAGTGTAACTGGAGGAGACACAGGGCTTTGTGACGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
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| CDS-3UTR CAA 90 bp | TCTGTTCCCGTCACAAAGCCCTGTGTCTCCTCCAGTTACACTGTGTCGACTATCCTACATTCCTGTCTCTaGGATGCGTGCCTTCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SVPVTKPCVSSSYTVSTILHSCL*DACLLD Trigger: ATCAAGAAGGCACGCATCCAAGAGACAGGAATGTAG...GATAGTCGACACAGTGTAACTGGAGGAGACACAGGGCTTTGTGACGGGAACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
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| CDS-3UTR CAA 90 bp | ACCCCAAAGCACTGGCTGGTCATGGCTTTCTTCTACAGCTCGCTGAGGTCAATCGAAGGCCACCATCCATaGTTAAAGACCCAAACCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TPKHWLVMAFFYSSLRSIEGHHP*LKTQTF Trigger: AAAGGTTTGGGTCTTTAACAATGGATGGTGGCCTTC...GATTGACCTCAGCGAGCTGTAGAAGAAAGCCATGACCAGCCAGTGCTTTGGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
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| CDS TCA 90 bp | TCTCTCGGAGATGATTCATCCCGCCCACCACATCTCGTAAGACAATaGGAAATTCTGATTCTGGAAGTCCATACGCATTGGACGGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SLGDDSSRPPHLVRQ*EILILEVHTHWTAP Trigger: AGGAGCCGTCCAATGCGTATGGACTTCCAGAATCAGAATTTCTCATTGTCTTACGAGATGTGGTGGGCGGGATGAATCATCTCCGAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020316.4 ENSMUST00000219493.2 |
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| CDS-3UTR CAA 90 bp | TTCTACAGCTCGCTGAGGTCAATCTGTCTTTGTTACAGCAGCCAAAATTCATATCCGAAATCCGTGAGTTaGTACACAGACTGGCCGTCC | + |
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Preference number: 5 (lower is better) Translates to: FYSSLRSICLCYSSQNSYPKSVS*YTDWPS Trigger: GGACGGCCAGTCTGTGTACAAACTCACGGATTTCGG...ATATGAATTTTGGCTGCTGTAACAAAGACAGATTGACCTCAGCGAGCTGTAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
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| CDS-3UTR CAA 90 bp | ATAATTCACCTAAAATCAAACATCCGAGGAAAACTGAGATTTGGGCACCCGGTCTCTGTACTCCAGATATaGCACCAGACGGCTTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: IIHLKSNIRGKLRFGHPVSVLQI*HQTASQ Trigger: CTGGGAAGCCGTCTGGTGCAATATCTGGAGTACAGA...GACCGGGTGCCCAAATCTCAGTTTTCCTCGGATGTTTGATTTTAGGTGAATTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
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| CDS-3UTR CAA 90 bp | TTCCCGTCACAAAGCCCTGTGTCTCCTCCAGTTACACTGTGTCGACTATCAGTCAGTGGCTCATTGCTTTaGTGGCATGGTAATACAATT | + |
|
Preference number: 5 (lower is better) Translates to: FPSQSPVSPPVTLCRLSVSGSLL*WHGNTI Trigger: AATTGTATTACCATGCCACAAAAGCAATGAGCCACT...GACTGATAGTCGACACAGTGTAACTGGAGGAGACACAGGGCTTTGTGACGGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
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| CDS-3UTR CAA 90 bp | GACCTGCAGTTTTTCTACATTCCTGTCTCTTGGATGCGTGCCTTCTTGATGTGCTTCAAATTCTCTCATTaGAACATCCACTGGGCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: DLQFFYIPVSWMRAFLMCFKFSH*NIHWAK Trigger: CTTCGCCCAGTGGATGTTCAAATGAGAGAATTTGAA...GCACATCAAGAAGGCACGCATCCAAGAGACAGGAATGTAGAAAAACTGCAGGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219400.2 |
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| CDS-3UTR CAA 90 bp | AATAATTCACCTAAAATCAAACATCCGAGGAAAACTGAGATTTGGGCACCCGGTATGACGCGCATGATGTaGCCTGGCTTGATATCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: NNSPKIKHPRKTEIWAPGMTRMM*PGLISR Trigger: CCGAGATATCAAGCCAGGCAACATCATGCGCGTCAT...ACCGGGTGCCCAAATCTCAGTTTTCCTCGGATGTTTGATTTTAGGTGAATTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
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| CDS-3UTR CAA 90 bp | ATAATTCACCTAAAATCAAACATCCGAGGAAAACTGAGATTTGGGCACCCGGTCTTATACATTACTTCTTaGTTCCTCCGAGGCCCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: IIHLKSNIRGKLRFGHPVLYITS*FLRGPS Trigger: CGAGGGGCCTCGGAGGAACAAAGAAGTAATGTATAA...GACCGGGTGCCCAAATCTCAGTTTTCCTCGGATGTTTGATTTTAGGTGAATTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
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| CDS-3UTR CAA 90 bp | TTGCTCAATAATTCACCTAAAATCAAACATCCGAGGAAAACTGAGATTTGGGCACTCCACTCCAGTCAATaGGTCCGTTTTCTGCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLNNSPKIKHPRKTEIWALHSSQ*VRFLLS Trigger: AGAAAGCAGAAAACGGACCAATTGACTGGAGTGGAG...TGCCCAAATCTCAGTTTTCCTCGGATGTTTGATTTTAGGTGAATTATTGAGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020316.4 |
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| CDS CCA 72 bp | TTATGCCTTCCTCGGAAGACATTTGCAGTGGCCCCCTaGCCTAGGATATCAGACAGGAGCCACAGATGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LCLPRKTFAVAP*PRISDRSHRWL Trigger: CAACCATCTGTGGCTCCTGTCTGATATCCTAGGCCAGGGGGCCACTGCAAATGTCTTCCGAGGAAGGCATAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020316.4 ENSMUST00000219400.2 |
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| CDS TCA 72 bp | GATGATTCATCCCGCCCACCACATCTCGTAAGACAATaGGAAATTCTGATTCTGGAAGTCCATACGCATTGG | + |
|
Preference number: 6 (lower is better) Translates to: DDSSRPPHLVRQ*EILILEVHTHW Trigger: CCAATGCGTATGGACTTCCAGAATCAGAATTTCTCATTGTCTTACGAGATGTGGTGGGCGGGATGAATCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020316.4 ENSMUST00000219493.2 |
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| CDS CAA 90 bp | TCTCGTAAGACAATGAGAAATTCTGATTCTGGAAGTCCATACGCATaGGACGGCTCCTCTAGAACAGTGTATAAACTCCCACAGGGACAA | + |
|
Preference number: 6 (lower is better) Translates to: SRKTMRNSDSGSPYA*DGSSRTVYKLPQGQ Trigger: TTGTCCCTGTGGGAGTTTATACACTGTTCTAGAGGAGCCGTCCAATGCGTATGGACTTCCAGAATCAGAATTTCTCATTGTCTTACGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020316.4 ENSMUST00000219400.2 ENSMUST00000219493.2 |
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| CDS CAA 72 bp | ACAATGAGAAATTCTGATTCTGGAAGTCCATACGCATaGGACGGCTCCTCTAGAACAGTGTATAAACTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: TMRNSDSGSPYA*DGSSRTVYKLP Trigger: TGGGAGTTTATACACTGTTCTAGAGGAGCCGTCCAATGCGTATGGACTTCCAGAATCAGAATTTCTCATTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020316.4 ENSMUST00000219400.2 ENSMUST00000219493.2 |
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