Pregenerated sensors for TBCE (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039233Ensembl transcript IDs: ENSMUST00000039894.13, ENSMUST00000159893.8, ENSMUST00000162326.2
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CGCCTTTCCTCTGGAAGAATCTGGCACCTGTTCAGGGTCCTCAGCTaGGCAATCTTGGCGATAATGATCTCCTCTGCTTTGTCCGCTTTG | + |
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Preference number: 1 (lower is better) Translates to: RLSSGRIWHLFRVLS*AILAIMISSALSAL Trigger: CAAAGCGGACAAAGCAGAGGAGATCATTATCGCCAAGATTGCTCAGCTGAGGACCCTGAACAGGTGCCAGATTCTTCCAGAGGAAAGGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
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| 3UTR GCA 90 bp | GTTCAGGGTCCTCAGCTGAGCAATCTTGGCGATAATGATCTCCTCTaGTTTGTCCGCTTTGCTCAAAGGGTTTCTAGTGCAGGACAGGGC | + |
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Preference number: 1 (lower is better) Translates to: VQGPQLSNLGDNDLL*FVRFAQRVSSAGQG Trigger: GCCCTGTCCTGCACTAGAAACCCTTTGAGCAAAGCGGACAAAGCAGAGGAGATCATTATCGCCAAGATTGCTCAGCTGAGGACCCTGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
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| 3UTR TCA 90 bp | AGGTGCACCATATTTGCAGCAGAGAAGCTGGTATCTAGGATGGGCTaGGAGAAACGCTGCATTTGGCCTGTTTTTGTCTGGATCTGGGTG | + |
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Preference number: 1 (lower is better) Translates to: RCTIFAAEKLVSRMG*EKRCIWPVFVWIWV Trigger: CACCCAGATCCAGACAAAAACAGGCCAAATGCAGCGTTTCTCTCAGCCCATCCTAGATACCAGCTTCTCTGCTGCAAATATGGTGCACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
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| 3UTR GCA 90 bp | GCTTTGCTCAAAGGGTTTCTAGTGCAGGACAGGGCCTGCAGGCTCTaGAGTTTATCCAGCTCGTTGATAAATGACCATTCTGATATCTGG | + |
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Preference number: 1 (lower is better) Translates to: ALLKGFLVQDRACRL*SLSSSLINDHSDIW Trigger: CCAGATATCAGAATGGTCATTTATCAACGAGCTGGATAAACTGCAGAGCCTGCAGGCCCTGTCCTGCACTAGAAACCCTTTGAGCAAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
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| 3UTR CCA 90 bp | TTGAGCTCCTCATCTTCAGGTGCACCATATTTGCAGCAGAGAAGCTaGTATCTAGGATGGGCTGAGAGAAACGCTGCATTTGGCCTGTTT | + |
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Preference number: 1 (lower is better) Translates to: LSSSSSGAPYLQQRS*YLGWAERNAAFGLF Trigger: AAACAGGCCAAATGCAGCGTTTCTCTCAGCCCATCCTAGATACCAGCTTCTCTGCTGCAAATATGGTGCACCTGAAGATGAGGAGCTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
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| 3UTR GCA 90 bp | ACCAGCATGGCTCACGGCACAGTTCCAGAGGGAAATGTCCTGCAGTaGTCTCAGCTGACTCTGCTTCTTTGTAATATGTTCAAAACCAAT | + |
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Preference number: 1 (lower is better) Translates to: TSMAHGTVPEGNVLQ*SQLTLLLCNMFKTN Trigger: ATTGGTTTTGAACATATTACAAAGAAGCAGAGTCAGCTGAGAGCACTGCAGGACATTTCCCTCTGGAACTGTGCCGTGAGCCATGCTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
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| 3UTR TCA 90 bp | CTCACGGCACAGTTCCAGAGGGAAATGTCCTGCAGTGCTCTCAGCTaGCTCTGCTTCTTTGTAATATGTTCAAAACCAATAGTTTGCACT | + |
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Preference number: 1 (lower is better) Translates to: LTAQFQREMSCSALS*LCFFVICSKPIVCT Trigger: AGTGCAAACTATTGGTTTTGAACATATTACAAAGAAGCAGAGTCAGCTGAGAGCACTGCAGGACATTTCCCTCTGGAACTGTGCCGTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
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| 3UTR TCA 90 bp | GACACAGGAACTTTGAGAAGACGTGACAACAGTCCCTTTACCTTTTaGACTGTCATGGAGTCTGGCAACTGCTTTTCTAATATTTGCCGT | + |
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Preference number: 1 (lower is better) Translates to: DTGTLRRRDNSPFTF*TVMESGNCFSNICR Trigger: ACGGCAAATATTAGAAAAGCAGTTGCCAGACTCCATGACAGTTCAAAAGGTAAAGGGACTGTTGTCACGTCTTCTCAAAGTTCCTGTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159893.8 ENSMUST00000162326.2 |
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| 3UTR GCA 90 bp | TCATCAATTGATGGGTTGGAGGAAAGGTCTAGTAACCTCATTTTCTaGAGGACATTCACTGGCCTCAGTCCACGTTATTCCTGTTTTGTT | + |
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Preference number: 1 (lower is better) Translates to: SSIDGLEERSSNLIF*RTFTGLSPRYSCFV Trigger: AACAAAACAGGAATAACGTGGACTGAGGCCAGTGAATGTCCTGCAGAAAATGAGGTTACTAGACCTTTCCTCCAACCCATCAATTGATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
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| 3UTR GCA 90 bp | TGCAGTTTATTTTCACTGAGATCAAGAGCCTCCAGGTCTTTGAGCTaGTCTGCAATAAGAACCACTTCATCCCAAGTTGACAACAAGTTT | + |
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Preference number: 1 (lower is better) Translates to: CSLFSLRSRASRSLS*SAIRTTSSQVDNKF Trigger: AAACTTGTTGTCAACTTGGGATGAAGTGGTTCTTATTGCAGAGCAGCTCAAAGACCTGGAGGCTCTTGATCTCAGTGAAAATAAACTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
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| 3UTR GCA 90 bp | AGAGTAGAAAATGTTCTAGTTAGAGTTGGTGAGTCAGAGGGAAACTaGAGTTTATTTTCACTGAGATCAAGAGCCTCCAGGTCTTTGAGC | + |
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Preference number: 1 (lower is better) Translates to: RVENVLVRVGESEGN*SLFSLRSRASRSLS Trigger: GCTCAAAGACCTGGAGGCTCTTGATCTCAGTGAAAATAAACTGCAGTTTCCCTCTGACTCACCAACTCTAACTAGAACATTTTCTACTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
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| 3UTR CCA 90 bp | CCCAAGTTGACAACAAGTTTTTGGATAAATTTACAACTCGAATATTaGGGCAGGCTTCAGCAATTCTTCCTTGTTCACCAGCATGGCTCA | + |
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Preference number: 1 (lower is better) Translates to: PKLTTSFWINLQLEY*GRLQQFFLVHQHGS Trigger: TGAGCCATGCTGGTGAACAAGGAAGAATTGCTGAAGCCTGCCCCAATATTCGAGTTGTAAATTTATCCAAAAACTTGTTGTCAACTTGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
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| 3UTR-3UTR CCA 90 bp | TGTTTTTGTCTGGATCTGGGTGTCCACCAGCCTTTCTCCATTCATTTCCAAAGGCCTTGTTCACCAGCATaGCTCACGGCACAGTTCCAG | + |
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Preference number: 2 (lower is better) Translates to: CFCLDLGVHQPFSIHFQRPCSPA*LTAQFQ Trigger: CTGGAACTGTGCCGTGAGCCATGCTGGTGAACAAGG...CCTTTGGAAATGAATGGAGAAAGGCTGGTGGACACCCAGATCCAGACAAAAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
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| 3UTR CAA 90 bp | AATGGCTGCTGTGTTTTGAGCTCCTCATCTTCAGGTGCACCATATTaGCAGCAGAGAAGCTGGTATCTAGGATGGGCTGAGAGAAACGCT | + |
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Preference number: 2 (lower is better) Translates to: NGCCVLSSSSSGAPY*QQRSWYLGWAERNA Trigger: AGCGTTTCTCTCAGCCCATCCTAGATACCAGCTTCTCTGCTGCAAATATGGTGCACCTGAAGATGAGGAGCTCAAAACACAGCAGCCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
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| 3UTR CAA 90 bp | CTAGTGCAGGACAGGGCCTGCAGGCTCTGCAGTTTATCCAGCTCGTaGATAAATGACCATTCTGATATCTGGTTGTCATTGACTATGAGG | + |
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Preference number: 2 (lower is better) Translates to: LVQDRACRLCSLSSS*INDHSDIWLSLTMR Trigger: CCTCATAGTCAATGACAACCAGATATCAGAATGGTCATTTATCAACGAGCTGGATAAACTGCAGAGCCTGCAGGCCCTGTCCTGCACTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
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| 3UTR-3UTR GCA 90 bp | TTGGCCTGTTTTTGTCTGGATCTGGGTGTCCACCAGCCTTTCTCCATTCATTTCAGTAACCTCATTTTCTaGAGGACATTCACTGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: LACFCLDLGVHQPFSIHFSNLIF*RTFTGL Trigger: GAGGCCAGTGAATGTCCTGCAGAAAATGAGGTTACT...GAAATGAATGGAGAAAGGCTGGTGGACACCCAGATCCAGACAAAAACAGGCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
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| 3UTR-3UTR TCA 90 bp | GTTGTCATTGACTATGAGGTACTTCAAGGCCGGGAACATGGATGTTTTGCATCCTGCAGTGCTCTCAGCTaGCTCTGCTTCTTTGTAATA | + |
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Preference number: 2 (lower is better) Translates to: VVIDYEVLQGREHGCFASCSALS*LCFFVI Trigger: TATTACAAAGAAGCAGAGTCAGCTGAGAGCACTGCA...GGATGCAAAACATCCATGTTCCCGGCCTTGAAGTACCTCATAGTCAATGACAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
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| 3UTR CAA 90 bp | GGAAACTGCAGTTTATTTTCACTGAGATCAAGAGCCTCCAGGTCTTaGAGCTGCTCTGCAATAAGAACCACTTCATCCCAAGTTGACAAC | + |
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Preference number: 2 (lower is better) Translates to: GNCSLFSLRSRASRS*SCSAIRTTSSQVDN Trigger: GTTGTCAACTTGGGATGAAGTGGTTCTTATTGCAGAGCAGCTCAAAGACCTGGAGGCTCTTGATCTCAGTGAAAATAAACTGCAGTTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
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| 3UTR CAA 90 bp | GGAAGATCTGCTATAAGGCTCAGCTGGCTTTCATCAATTGATGGGTaGGAGGAAAGGTCTAGTAACCTCATTTTCTGCAGGACATTCACT | + |
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Preference number: 2 (lower is better) Translates to: GRSAIRLSWLSSIDG*EERSSNLIFCRTFT Trigger: AGTGAATGTCCTGCAGAAAATGAGGTTACTAGACCTTTCCTCCAACCCATCAATTGATGAAAGCCAGCTGAGCCTTATAGCAGATCTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
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| 3UTR-3UTR GCA 90 bp | GTTAAACTCTTACGGTTGGACTGTTACCATCGCACTAGTAGGCAATCTCCATTTCAGGTGCACCATATTTaGAGCAGAGAAGCTGGTATC | + |
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Preference number: 2 (lower is better) Translates to: VKLLRLDCYHRTSRQSPFQVHHI*SREAGI Trigger: GATACCAGCTTCTCTGCTGCAAATATGGTGCACCTG...AAATGGAGATTGCCTACTAGTGCGATGGTAACAGTCCAACCGTAAGAGTTTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
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| 3UTR-3UTR CCA 90 bp | TGTTTTTGTCTGGATCTGGGTGTCCACCAGCCTTTCTCCATTCATTTCCAAAGGCATCAATTGATGGGTTaGAGGAAAGGTCTAGTAACC | + |
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Preference number: 2 (lower is better) Translates to: CFCLDLGVHQPFSIHFQRHQLMG*RKGLVT Trigger: GGTTACTAGACCTTTCCTCCAACCCATCAATTGATG...CCTTTGGAAATGAATGGAGAAAGGCTGGTGGACACCCAGATCCAGACAAAAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
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| 3UTR CAA 90 bp | TGCAGTTTATCCAGCTCGTTGATAAATGACCATTCTGATATCTGGTaGTCATTGACTATGAGGTACTTCAAGGCCGGGAACATGGATGTT | + |
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Preference number: 2 (lower is better) Translates to: CSLSSSLINDHSDIW*SLTMRYFKAGNMDV Trigger: AACATCCATGTTCCCGGCCTTGAAGTACCTCATAGTCAATGACAACCAGATATCAGAATGGTCATTTATCAACGAGCTGGATAAACTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
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| 3UTR CAA 90 bp | GTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGGTTTaGTTTCTGGTGTATACATTCCAGTCGTTAAACTCTTACGGTTGG | + |
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Preference number: 2 (lower is better) Translates to: VFSQQNITSFVRAKV*FLVYTFQSLNSYGW Trigger: CCAACCGTAAGAGTTTAACGACTGGAATGTATACACCAGAAACAAAACCTTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039894.13 ENSMUST00000159893.8 ENSMUST00000162326.2 |
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| 3UTR CAA 90 bp | TGCTCTGCAATAAGAACCACTTCATCCCAAGTTGACAACAAGTTTTaGGATAAATTTACAACTCGAATATTGGGGCAGGCTTCAGCAATT | + |
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Preference number: 2 (lower is better) Translates to: CSAIRTTSSQVDNKF*DKFTTRILGQASAI Trigger: AATTGCTGAAGCCTGCCCCAATATTCGAGTTGTAAATTTATCCAAAAACTTGTTGTCAACTTGGGATGAAGTGGTTCTTATTGCAGAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
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| 3UTR-3UTR CCA 90 bp | GTTCTAGTTAGAGTTGGTGAGTCAGAGGGAAACTGCAGTTTATTTTCACTGAGACAAAGGTTTTGTTTCTaGTGTATACATTCCAGTCGT | + |
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Preference number: 2 (lower is better) Translates to: VLVRVGESEGNCSLFSLRQRFCF*CIHSSR Trigger: ACGACTGGAATGTATACACCAGAAACAAAACCTTTG...TCTCAGTGAAAATAAACTGCAGTTTCCCTCTGACTCACCAACTCTAACTAGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
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| 3UTR TCA 72 bp | TCTGGAAGAATCTGGCACCTGTTCAGGGTCCTCAGCTaGGCAATCTTGGCGATAATGATCTCCTCTGCTTTG | + |
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Preference number: 3 (lower is better) Translates to: SGRIWHLFRVLS*AILAIMISSAL Trigger: CAAAGCAGAGGAGATCATTATCGCCAAGATTGCTCAGCTGAGGACCCTGAACAGGTGCCAGATTCTTCCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
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| 3UTR-3UTR CAA 90 bp | TTGGCCTGTTTTTGTCTGGATCTGGGTGTCCACCAGCCTTTCTCCATTCATTTCAGAGCCTCCAGGTCTTaGAGCTGCTCTGCAATAAGA | + |
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Preference number: 3 (lower is better) Translates to: LACFCLDLGVHQPFSIHFRASRS*SCSAIR Trigger: TCTTATTGCAGAGCAGCTCAAAGACCTGGAGGCTCT...GAAATGAATGGAGAAAGGCTGGTGGACACCCAGATCCAGACAAAAACAGGCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
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| 3UTR GCA 72 bp | GATGGGTTGGAGGAAAGGTCTAGTAACCTCATTTTCTaGAGGACATTCACTGGCCTCAGTCCACGTTATTCC | + |
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Preference number: 3 (lower is better) Translates to: DGLEERSSNLIF*RTFTGLSPRYS Trigger: GGAATAACGTGGACTGAGGCCAGTGAATGTCCTGCAGAAAATGAGGTTACTAGACCTTTCCTCCAACCCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
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| 3UTR GCA 72 bp | AAAGGGTTTCTAGTGCAGGACAGGGCCTGCAGGCTCTaGAGTTTATCCAGCTCGTTGATAAATGACCATTCT | + |
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Preference number: 3 (lower is better) Translates to: KGFLVQDRACRL*SLSSSLINDHS Trigger: AGAATGGTCATTTATCAACGAGCTGGATAAACTGCAGAGCCTGCAGGCCCTGTCCTGCACTAGAAACCCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
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| 3UTR GCA 72 bp | GAATGGCTGCTGTGTTTTGAGCTCCTCATCTTCAGGTaGACCATATTTGCAGCAGAGAAGCTGGTATCTAGG | + |
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Preference number: 3 (lower is better) Translates to: EWLLCFELLIFR*TIFAAEKLVSR Trigger: CCTAGATACCAGCTTCTCTGCTGCAAATATGGTGCACCTGAAGATGAGGAGCTCAAAACACAGCAGCCATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
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| 3UTR-3UTR CAA 90 bp | CTCATCTTCAGGTGCACCATATTTGCAGCAGAGAAGCTGGTATCTAGGATGGGCTCATCAATTGATGGGTaGGAGGAAAGGTCTAGTAAC | + |
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Preference number: 3 (lower is better) Translates to: LIFRCTIFAAEKLVSRMGSSIDG*EERSSN Trigger: GTTACTAGACCTTTCCTCCAACCCATCAATTGATGA...GCCCATCCTAGATACCAGCTTCTCTGCTGCAAATATGGTGCACCTGAAGATGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
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| 3UTR-3UTR CAA 90 bp | CTCATCTTCAGGTGCACCATATTTGCAGCAGAGAAGCTGGTATCTAGGATGGGCGGGAACATGGATGTTTaGCATCCAATTTCAGCATCT | + |
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Preference number: 3 (lower is better) Translates to: LIFRCTIFAAEKLVSRMGGNMDV*HPISAS Trigger: AGATGCTGAAATTGGATGCAAAACATCCATGTTCCC...GCCCATCCTAGATACCAGCTTCTCTGCTGCAAATATGGTGCACCTGAAGATGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
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| 3UTR CCA 72 bp | TCATCTTCAGGTGCACCATATTTGCAGCAGAGAAGCTaGTATCTAGGATGGGCTGAGAGAAACGCTGCATTT | + |
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Preference number: 3 (lower is better) Translates to: SSSGAPYLQQRS*YLGWAERNAAF Trigger: AAATGCAGCGTTTCTCTCAGCCCATCCTAGATACCAGCTTCTCTGCTGCAAATATGGTGCACCTGAAGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
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| 3UTR GCA 72 bp | TTTTCACTGAGATCAAGAGCCTCCAGGTCTTTGAGCTaGTCTGCAATAAGAACCACTTCATCCCAAGTTGAC | + |
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Preference number: 3 (lower is better) Translates to: FSLRSRASRSLS*SAIRTTSSQVD Trigger: GTCAACTTGGGATGAAGTGGTTCTTATTGCAGAGCAGCTCAAAGACCTGGAGGCTCTTGATCTCAGTGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
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| 3UTR-3UTR CAA 90 bp | TCATGGAGTCTGGCAACTGCTTTTCTAATATTTGCCGTTCAGGTTGATTTGAGCGCTGGCTTTCATCAATaGATGGGTTGGAGGAAAGGT | + |
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Preference number: 3 (lower is better) Translates to: SWSLATAFLIFAVQVDLSAGFHQ*MGWRKG Trigger: ACCTTTCCTCCAACCCATCAATTGATGAAAGCCAGC...GCTCAAATCAACCTGAACGGCAAATATTAGAAAAGCAGTTGCCAGACTCCATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
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| 3UTR CCA 72 bp | CTGGTGTATACATTCCAGTCGTTAAACTCTTACGGTTaGACTGTTACCATCGCACTAGTAGGCAATCTCCAT | + |
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Preference number: 3 (lower is better) Translates to: LVYTFQSLNSYG*TVTIALVGNLH Trigger: ATGGAGATTGCCTACTAGTGCGATGGTAACAGTCCAACCGTAAGAGTTTAACGACTGGAATGTATACACCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159893.8 ENSMUST00000162326.2 |
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| 3UTR-3UTR CAA 90 bp | GTTAAACTCTTACGGTTGGACTGTTACCATCGCACTAGTAGGCAATCTCCATTTTCTGACACAGGAACTTaGAGAAGACGTGACAACAGT | + |
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Preference number: 3 (lower is better) Translates to: VKLLRLDCYHRTSRQSPFSDTGT*RRRDNS Trigger: ACTGTTGTCACGTCTTCTCAAAGTTCCTGTGTCAGA...AAATGGAGATTGCCTACTAGTGCGATGGTAACAGTCCAACCGTAAGAGTTTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159893.8 ENSMUST00000162326.2 |
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| 3UTR GCA 72 bp | AATGTTCTAGTTAGAGTTGGTGAGTCAGAGGGAAACTaGAGTTTATTTTCACTGAGATCAAGAGCCTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: NVLVRVGESEGN*SLFSLRSRASR Trigger: CCTGGAGGCTCTTGATCTCAGTGAAAATAAACTGCAGTTTCCCTCTGACTCACCAACTCTAACTAGAACATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
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| 3UTR CCA 72 bp | GACGTGACAACAGTCCCTTTACCTTTTGAACTGTCATaGAGTCTGGCAACTGCTTTTCTAATATTTGCCGTT | + |
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Preference number: 3 (lower is better) Translates to: DVTTVPLPFELS*SLATAFLIFAV Trigger: AACGGCAAATATTAGAAAAGCAGTTGCCAGACTCCATGACAGTTCAAAAGGTAAAGGGACTGTTGTCACGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159893.8 ENSMUST00000162326.2 |
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| 3UTR-3UTR CAA 90 bp | TGTTTTTGTCTGGATCTGGGTGTCCACCAGCCTTTCTCCATTCATTTCCAAAGGCACGTTATTCCTGTTTaGTTTAGGACTAAAGTCTTC | + |
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Preference number: 3 (lower is better) Translates to: CFCLDLGVHQPFSIHFQRHVIPV*FRTKVF Trigger: GAAGACTTTAGTCCTAAACAAAACAGGAATAACGTG...CCTTTGGAAATGAATGGAGAAAGGCTGGTGGACACCCAGATCCAGACAAAAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
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| 3UTR TCA 72 bp | ACTTTGAGAAGACGTGACAACAGTCCCTTTACCTTTTaGACTGTCATGGAGTCTGGCAACTGCTTTTCTAAT | + |
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Preference number: 3 (lower is better) Translates to: TLRRRDNSPFTF*TVMESGNCFSN Trigger: ATTAGAAAAGCAGTTGCCAGACTCCATGACAGTTCAAAAGGTAAAGGGACTGTTGTCACGTCTTCTCAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159893.8 ENSMUST00000162326.2 |
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| 3UTR TCA 72 bp | TCTGGCAACTGCTTTTCTAATATTTGCCGTTCAGGTTaGTTTGAGCATTTTATCTTCAGGGTTAGTAGCTGT | + |
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Preference number: 3 (lower is better) Translates to: SGNCFSNICRSG*FEHFIFRVSSC Trigger: ACAGCTACTAACCCTGAAGATAAAATGCTCAAATCAACCTGAACGGCAAATATTAGAAAAGCAGTTGCCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159893.8 ENSMUST00000162326.2 |
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| 3UTR CCA 72 bp | ACAACAAGTTTTTGGATAAATTTACAACTCGAATATTaGGGCAGGCTTCAGCAATTCTTCCTTGTTCACCAG | + |
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Preference number: 3 (lower is better) Translates to: TTSFWINLQLEY*GRLQQFFLVHQ Trigger: CTGGTGAACAAGGAAGAATTGCTGAAGCCTGCCCCAATATTCGAGTTGTAAATTTATCCAAAAACTTGTTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
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| CDS-3UTR GCA 90 bp | TGGAGGAAAGGTCTAGTAACCTCATTTTCTGCAGGACATTCACTGGCCTCAGTCGAGCCTCCTGTTGGGTaGCTGCCACAGGAGGAACAG | + |
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Preference number: 4 (lower is better) Translates to: WRKGLVTSFSAGHSLASVEPPVG*LPQEEQ Trigger: CTGTTCCTCCTGTGGCAGGCACCCAACAGGAGGCTC...GACTGAGGCCAGTGAATGTCCTGCAGAAAATGAGGTTACTAGACCTTTCCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
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| 3UTR CAA 72 bp | ATCTTGGCGATAATGATCTCCTCTGCTTTGTCCGCTTaGCTCAAAGGGTTTCTAGTGCAGGACAGGGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: ILAIMISSALSA*LKGFLVQDRAC Trigger: GCAGGCCCTGTCCTGCACTAGAAACCCTTTGAGCAAAGCGGACAAAGCAGAGGAGATCATTATCGCCAAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
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| 3UTR CAA 72 bp | TGTGTTTTGAGCTCCTCATCTTCAGGTGCACCATATTaGCAGCAGAGAAGCTGGTATCTAGGATGGGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: CVLSSSSSGAPY*QQRSWYLGWAE Trigger: CTCAGCCCATCCTAGATACCAGCTTCTCTGCTGCAAATATGGTGCACCTGAAGATGAGGAGCTCAAAACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
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| CDS-3UTR TCA 90 bp | CAACCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGGTCTCGAGGACTGGCCATaGAGGAGCACAGTGCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: QPNGLFPTKHNIICEGKGLEDWP*RSTVQH Trigger: GTGCTGCACTGTGCTCCTTCATGGCCAGTCCTCGAG...ACCTTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039894.13 ENSMUST00000162326.2 |
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| CDS-3UTR GCA 90 bp | TCGTTAAACTCTTACGGTTGGACTGTTACCATCGCACTAGTAGGCAATCTCCATTCGTGGCTCCCGTCATaGTTTCCTCTCTCAGGATTG | + |
|
Preference number: 4 (lower is better) Translates to: SLNSYGWTVTIALVGNLHSWLPS*FPLSGL Trigger: CAATCCTGAGAGAGGAAAGCATGACGGGAGCCACGA...ATGGAGATTGCCTACTAGTGCGATGGTAACAGTCCAACCGTAAGAGTTTAACGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162326.2 |
||
| CDS-3UTR GCA 90 bp | TCGTTAAACTCTTACGGTTGGACTGTTACCATCGCACTAGTAGGCAATCTCCATCATGAAGGAGCACAGTaGAGCACCTCAGTCCACGTT | + |
|
Preference number: 4 (lower is better) Translates to: SLNSYGWTVTIALVGNLHHEGAQ*STSVHV Trigger: AACGTGGACTGAGGTGCTGCACTGTGCTCCTTCATG...ATGGAGATTGCCTACTAGTGCGATGGTAACAGTCCAACCGTAAGAGTTTAACGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162326.2 |
||
| CDS-3UTR TCA 90 bp | CCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGGTTTTCTCGAGGACTGGCCATaGAGGAGCACAGTGCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PNGLFPTKHNIICEGKGFLEDWP*RSTVQH Trigger: GTGCTGCACTGTGCTCCTTCATGGCCAGTCCTCGAG...AAAACCTTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039894.13 ENSMUST00000162326.2 |
||
| CDS-3UTR GCA 90 bp | CAACCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGGTGTGCAGGACAGGGCCTaGAGGCTCTGCAGTTTATCC | + |
|
Preference number: 4 (lower is better) Translates to: QPNGLFPTKHNIICEGKGVQDRA*RLCSLS Trigger: GGATAAACTGCAGAGCCTGCAGGCCCTGTCCTGCAC...ACCTTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039894.13 ENSMUST00000162326.2 |
||
| CDS-3UTR GCA 90 bp | ATTTCAGCATCTGGAAAATGTATAGAAGAAAGTCCAATGTCAGAAAGGACTAGGCTCCTGTTGGGTGCCTaGCACAGGAGGAACAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: ISASGKCIEESPMSERTRLLLGA*HRRNST Trigger: GGTGCTGTTCCTCCTGTGGCAGGCACCCAACAGGAG...CCTAGTCCTTTCTGACATTGGACTTTCTTCTATACATTTTCCAGATGCTGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
||
| 3UTR CAA 72 bp | GACAGGGCCTGCAGGCTCTGCAGTTTATCCAGCTCGTaGATAAATGACCATTCTGATATCTGGTTGTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: DRACRLCSLSSS*INDHSDIWLSL Trigger: CAATGACAACCAGATATCAGAATGGTCATTTATCAACGAGCTGGATAAACTGCAGAGCCTGCAGGCCCTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
||
| CDS-3UTR TCA 90 bp | GTCGTTAAACTCTTACGGTTGGACTGTTACCATCGCACTAGTAGGCAATCTCCATGCAGTGCTCTCAGCTaGCTCTGCTTCTTTGTAATA | + |
|
Preference number: 4 (lower is better) Translates to: VVKLLRLDCYHRTSRQSPCSALS*LCFFVI Trigger: TATTACAAAGAAGCAGAGTCAGCTGAGAGCACTGCA...TGGAGATTGCCTACTAGTGCGATGGTAACAGTCCAACCGTAAGAGTTTAACGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162326.2 |
||
| CDS-3UTR TCA 90 bp | GTTAAACTCTTACGGTTGGACTGTTACCATCGCACTAGTAGGCAATCTCCATTTTTCAGGGTCCTCAGCTaGGCAATCTTGGCGATAATG | + |
|
Preference number: 4 (lower is better) Translates to: VKLLRLDCYHRTSRQSPFFRVLS*AILAIM Trigger: CATTATCGCCAAGATTGCTCAGCTGAGGACCCTGAA...AAATGGAGATTGCCTACTAGTGCGATGGTAACAGTCCAACCGTAAGAGTTTAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162326.2 |
||
| CDS-3UTR GCA 90 bp | TACAACCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGGTGCAGGACAGGGCCTaGAGGCTCTGCAGTTTATCC | + |
|
Preference number: 4 (lower is better) Translates to: YNQMVFSQQNITSFVRAKVQDRA*RLCSLS Trigger: GGATAAACTGCAGAGCCTGCAGGCCCTGTCCTGCAC...CTTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGGTTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039894.13 ENSMUST00000162326.2 |
||
| 3UTR CAA 72 bp | GCTATAAGGCTCAGCTGGCTTTCATCAATTGATGGGTaGGAGGAAAGGTCTAGTAACCTCATTTTCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AIRLSWLSSIDG*EERSSNLIFCR Trigger: CCTGCAGAAAATGAGGTTACTAGACCTTTCCTCCAACCCATCAATTGATGAAAGCCAGCTGAGCCTTATAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
||
| CDS-3UTR GCA 90 bp | CAACCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGGTTCGTGGCTCCCGTCATaGTTTCCTCTCTCAGGATTG | + |
|
Preference number: 4 (lower is better) Translates to: QPNGLFPTKHNIICEGKGSWLPS*FPLSGL Trigger: CAATCCTGAGAGAGGAAAGCATGACGGGAGCCACGA...ACCTTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039894.13 ENSMUST00000162326.2 |
||
| CDS-3UTR CCA 90 bp | TACAACCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGCCTTGTTCACCAGCATaGCTCACGGCACAGTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: YNQMVFSQQNITSFVRAKPCSPA*LTAQFQ Trigger: CTGGAACTGTGCCGTGAGCCATGCTGGTGAACAAGG...CTTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGGTTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039894.13 ENSMUST00000162326.2 |
||
| CDS-3UTR CCA 90 bp | CCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGGTTTTCCTTGTTCACCAGCATaGCTCACGGCACAGTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PNGLFPTKHNIICEGKGFPCSPA*LTAQFQ Trigger: CTGGAACTGTGCCGTGAGCCATGCTGGTGAACAAGG...AAAACCTTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039894.13 ENSMUST00000162326.2 |
||
| CDS-3UTR CCA 90 bp | CAACCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGGTTGGCCTGTTTTTGTCTaGATCTGGGTGTCCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QPNGLFPTKHNIICEGKGWPVFV*IWVSTS Trigger: GCTGGTGGACACCCAGATCCAGACAAAAACAGGCCA...ACCTTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039894.13 ENSMUST00000162326.2 |
||
| CDS-3UTR CCA 90 bp | ATTTCAGCATCTGGAAAATGTATAGAAGAAAGTCCAATGTCAGAAAGGACTAGGAAAAGAGCCTCCTGTTaGGTGCCTGCCACAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ISASGKCIEESPMSERTRKRASC*VPATGG Trigger: TCCTCCTGTGGCAGGCACCCAACAGGAGGCTCTTTT...CCTAGTCCTTTCTGACATTGGACTTTCTTCTATACATTTTCCAGATGCTGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
||
| 3UTR CAA 72 bp | TCCAGCTCGTTGATAAATGACCATTCTGATATCTGGTaGTCATTGACTATGAGGTACTTCAAGGCCGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSSLINDHSDIW*SLTMRYFKAGN Trigger: GTTCCCGGCCTTGAAGTACCTCATAGTCAATGACAACCAGATATCAGAATGGTCATTTATCAACGAGCTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
||
| 3UTR CAA 72 bp | TCTGGTGTATACATTCCAGTCGTTAAACTCTTACGGTaGGACTGTTACCATCGCACTAGTAGGCAATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SGVYIPVVKLLR*DCYHRTSRQSP Trigger: TGGAGATTGCCTACTAGTGCGATGGTAACAGTCCAACCGTAAGAGTTTAACGACTGGAATGTATACACCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159893.8 ENSMUST00000162326.2 |
||
| CDS-3UTR GCA 90 bp | TGGAGGAAAGGTCTAGTAACCTCATTTTCTGCAGGACATTCACTGGCCTCAGTCACAAAAGCGCACTGTTaGATATTCTCCATTAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: WRKGLVTSFSAGHSLASVTKAHC*IFSINF Trigger: GAAGTTAATGGAGAATATGCAACAGTGCGCTTTTGT...GACTGAGGCCAGTGAATGTCCTGCAGAAAATGAGGTTACTAGACCTTTCCTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
||
| CDS-3UTR GCA 90 bp | CCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGGTTTTCATGAAGGAGCACAGTaGAGCACCTCAGTCCACGTT | + |
|
Preference number: 4 (lower is better) Translates to: PNGLFPTKHNIICEGKGFHEGAQ*STSVHV Trigger: AACGTGGACTGAGGTGCTGCACTGTGCTCCTTCATG...AAAACCTTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039894.13 ENSMUST00000162326.2 |
||
| CDS-3UTR CCA 90 bp | TGTTTTTGTCTGGATCTGGGTGTCCACCAGCCTTTCTCCATTCATTTCCAAAGGGAAATTAACTTTGCTTaGACGAACAAAAGAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CFCLDLGVHQPFSIHFQREINFA*TNKRAS Trigger: GGAGGCTCTTTTGTTCGTCCAAGCAAAGTTAATTTC...CCTTTGGAAATGAATGGAGAAAGGCTGGTGGACACCCAGATCCAGACAAAAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
||
| CDS-3UTR CCA 90 bp | GTCGTTAAACTCTTACGGTTGGACTGTTACCATCGCACTAGTAGGCAATCTCCAGAAATTAACTTTGCTTaGACGAACAAAAGAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VVKLLRLDCYHRTSRQSPEINFA*TNKRAS Trigger: GGAGGCTCTTTTGTTCGTCCAAGCAAAGTTAATTTC...TGGAGATTGCCTACTAGTGCGATGGTAACAGTCCAACCGTAAGAGTTTAACGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159893.8 ENSMUST00000162326.2 |
||
| 3UTR CAA 72 bp | AGTTTATTTTCACTGAGATCAAGAGCCTCCAGGTCTTaGAGCTGCTCTGCAATAAGAACCACTTCATCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SLFSLRSRASRS*SCSAIRTTSSQ Trigger: TTGGGATGAAGTGGTTCTTATTGCAGAGCAGCTCAAAGACCTGGAGGCTCTTGATCTCAGTGAAAATAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
||
| CDS-3UTR TCA 90 bp | GTCGTTAAACTCTTACGGTTGGACTGTTACCATCGCACTAGTAGGCAATCTCCACAACTCTTCTACCAATaGCATCTAATGGCAAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: VVKLLRLDCYHRTSRQSPQLFYQ*HLMAKC Trigger: ACATTTTGCCATTAGATGTCATTGGTAGAAGAGTTG...TGGAGATTGCCTACTAGTGCGATGGTAACAGTCCAACCGTAAGAGTTTAACGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159893.8 ENSMUST00000162326.2 |
||
| CDS-3UTR TCA 90 bp | CCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGGTTTTTTCAGGGTCCTCAGCTaGGCAATCTTGGCGATAATG | + |
|
Preference number: 4 (lower is better) Translates to: PNGLFPTKHNIICEGKGFFRVLS*AILAIM Trigger: CATTATCGCCAAGATTGCTCAGCTGAGGACCCTGAA...AAAACCTTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGG 42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000039894.13 ENSMUST00000162326.2 |
||
| CDS-3UTR GCA 90 bp | CTGTCATGGAGTCTGGCAACTGCTTTTCTAATATTTGCCGTTCAGGTTGATTTGGAGCCTCCTGTTGGGTaGCTGCATTTAAAATACATA | + |
|
Preference number: 4 (lower is better) Translates to: LSWSLATAFLIFAVQVDLEPPVG*LHLKYI Trigger: TATGTATTTTAAATGCAGGCACCCAACAGGAGGCTC...CAAATCAACCTGAACGGCAAATATTAGAAAAGCAGTTGCCAGACTCCATGACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162326.2 |
||
| CDS-3UTR GCA 90 bp | CCTTTTGAACTGTCATGGAGTCTGGCAACTGCTTTTCTAATATTTGCCGTTCAGGTCTTTGAGCTGCTCTaGAATAAGAACCACTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: PFELSWSLATAFLIFAVQVFELL*NKNHFI Trigger: GATGAAGTGGTTCTTATTGCAGAGCAGCTCAAAGAC...CTGAACGGCAAATATTAGAAAAGCAGTTGCCAGACTCCATGACAGTTCAAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162326.2 |
||
| CDS-3UTR GCA 90 bp | TCGTTAAACTCTTACGGTTGGACTGTTACCATCGCACTAGTAGGCAATCTCCATGAGTCAGAGGGAAACTaGAGTTTATTTTCACTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLNSYGWTVTIALVGNLHESEGN*SLFSLR Trigger: TCTCAGTGAAAATAAACTGCAGTTTCCCTCTGACTC...ATGGAGATTGCCTACTAGTGCGATGGTAACAGTCCAACCGTAAGAGTTTAACGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162326.2 |
||
| CDS-3UTR GCA 90 bp | GTTAAACTCTTACGGTTGGACTGTTACCATCGCACTAGTAGGCAATCTCCATTTGATAATGATCTCCTCTaGTTTGTCCGCTTTGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: VKLLRLDCYHRTSRQSPFDNDLL*FVRFAQ Trigger: TTGAGCAAAGCGGACAAAGCAGAGGAGATCATTATC...AAATGGAGATTGCCTACTAGTGCGATGGTAACAGTCCAACCGTAAGAGTTTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162326.2 |
||
| CDS-3UTR GCA 90 bp | CAACCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGGTCAGGTGCACCATATTTaGAGCAGAGAAGCTGGTATC | + |
|
Preference number: 4 (lower is better) Translates to: QPNGLFPTKHNIICEGKGQVHHI*SREAGI Trigger: GATACCAGCTTCTCTGCTGCAAATATGGTGCACCTG...ACCTTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039894.13 |
||
| CDS-3UTR CCA 90 bp | CCTTTTGAACTGTCATGGAGTCTGGCAACTGCTTTTCTAATATTTGCCGTTCAGCATCAATTGATGGGTTaGAGGAAAGGTCTAGTAACC | + |
|
Preference number: 4 (lower is better) Translates to: PFELSWSLATAFLIFAVQHQLMG*RKGLVT Trigger: GGTTACTAGACCTTTCCTCCAACCCATCAATTGATG...CTGAACGGCAAATATTAGAAAAGCAGTTGCCAGACTCCATGACAGTTCAAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162326.2 |
||
| CDS-3UTR TCA 90 bp | CAACCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGGTTGCAGTGCTCTCAGCTaGCTCTGCTTCTTTGTAATA | + |
|
Preference number: 4 (lower is better) Translates to: QPNGLFPTKHNIICEGKGCSALS*LCFFVI Trigger: TATTACAAAGAAGCAGAGTCAGCTGAGAGCACTGCA...ACCTTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039894.13 ENSMUST00000162326.2 |
||
| CDS-3UTR TCA 90 bp | CAACCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGGTCCGTTCAGGTTGATTTaGGCATTTTATCTTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QPNGLFPTKHNIICEGKGPFRLI*AFYLQG Trigger: ACCCTGAAGATAAAATGCTCAAATCAACCTGAACGG...ACCTTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039894.13 |
||
| CDS-3UTR TCA 90 bp | AACCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGGTTGGACAACAGAAGTTCTaGCACAGGAACTTTGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NQMVFSQQNITSFVRAKVGQQKF*HRNFEK Trigger: CTTCTCAAAGTTCCTGTGTCAGAACTTCTGTTGTCC...AACCTTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039894.13 |
||
| CDS-3UTR GCA 90 bp | TCATGGAGTCTGGCAACTGCTTTTCTAATATTTGCCGTTCAGGTTGATTTGAGCACAAAAGCGCACTGTTaGATATTCTCCATTAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: SWSLATAFLIFAVQVDLSTKAHC*IFSINF Trigger: GAAGTTAATGGAGAATATGCAACAGTGCGCTTTTGT...GCTCAAATCAACCTGAACGGCAAATATTAGAAAAGCAGTTGCCAGACTCCATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159893.8 ENSMUST00000162326.2 |
||
| CDS-3UTR GCA 90 bp | AACCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGGTTTCCAGGTCTTTGAGCTaGTCTGCAATAAGAACCACT | + |
|
Preference number: 4 (lower is better) Translates to: NQMVFSQQNITSFVRAKVSRSLS*SAIRTT Trigger: AGTGGTTCTTATTGCAGAGCAGCTCAAAGACCTGGA...AACCTTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039894.13 ENSMUST00000162326.2 |
||
| 3UTR CAA 72 bp | GGACATTCACTGGCCTCAGTCCACGTTATTCCTGTTTaGTTTAGGACTAAAGTCTTCAGAGTAGAAAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: GHSLASVHVIPV*FRTKVFRVENV Trigger: AACATTTTCTACTCTGAAGACTTTAGTCCTAAACAAAACAGGAATAACGTGGACTGAGGCCAGTGAATGTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
||
| CDS-3UTR GCA 90 bp | TACAACCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGGTCTTTGAGCTGCTCTaGAATAAGAACCACTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: YNQMVFSQQNITSFVRAKVFELL*NKNHFI Trigger: GATGAAGTGGTTCTTATTGCAGAGCAGCTCAAAGAC...CTTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGGTTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039894.13 ENSMUST00000162326.2 |
||
| CDS-3UTR GCA 90 bp | ATACAACCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAATCCAGGTCTTTGAGCTaGTCTGCAATAAGAACCACT | + |
|
Preference number: 4 (lower is better) Translates to: IQPNGLFPTKHNIICEGKSRSLS*SAIRTT Trigger: AGTGGTTCTTATTGCAGAGCAGCTCAAAGACCTGGA...TTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGGTTGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039894.13 ENSMUST00000162326.2 |
||
| CDS-3UTR GCA 90 bp | TACAACCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGAGTAACCTCATTTTCTaGAGGACATTCACTGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: YNQMVFSQQNITSFVRAKSNLIF*RTFTGL Trigger: AAGGCCAGTGAATGTCCTGCAGAAAATGAGGTTACT...CTTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGGTTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039894.13 ENSMUST00000162326.2 |
||
| CDS-3UTR GCA 90 bp | CAACCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGGTGGAACATGGATGTTTTaGATCCAATTTCAGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: QPNGLFPTKHNIICEGKGGTWMF*IQFQHL Trigger: CAGATGCTGAAATTGGATGCAAAACATCCATGTTCC...ACCTTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039894.13 ENSMUST00000162326.2 |
||
| CDS-3UTR GCA 90 bp | CCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGGTTTTGATAATGATCTCCTCTaGTTTGTCCGCTTTGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PNGLFPTKHNIICEGKGFDNDLL*FVRFAQ Trigger: TTGAGCAAAGCGGACAAAGCAGAGGAGATCATTATC...AAAACCTTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039894.13 ENSMUST00000162326.2 |
||
| CDS-3UTR CCA 90 bp | TACAACCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGCTGCAGGACATTCACTaGCCTTTCAGAAATGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: YNQMVFSQQNITSFVRAKLQDIH*PFRNGN Trigger: ATTTCCATTTCTGAAAGGCCAGTGAATGTCCTGCAG...CTTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGGTTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039894.13 ENSMUST00000162326.2 |
||
| CDS-3UTR CCA 90 bp | AACCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGGTTCATCAATTGATGGGTTaGAGGAAAGGTCTAGTAACC | + |
|
Preference number: 4 (lower is better) Translates to: NQMVFSQQNITSFVRAKVHQLMG*RKGLVT Trigger: GGTTACTAGACCTTTCCTCCAACCCATCAATTGATG...AACCTTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039894.13 ENSMUST00000162326.2 |
||
| CDS-3UTR TCA 90 bp | CAACCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGGTATTTGCCGTTCAGGTTaGTTTGAGCATTTTATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QPNGLFPTKHNIICEGKGICRSG*FEHFIF Trigger: GAAGATAAAATGCTCAAATCAACCTGAACGGCAAAT...ACCTTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039894.13 |
||
| CDS-3UTR TCA 90 bp | ATACAACCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAAACTTTGAGAAGACGTaGCAACAGTCCCTTTACCTT | + |
|
Preference number: 4 (lower is better) Translates to: IQPNGLFPTKHNIICEGKNFEKT*QQSLYL Trigger: AAGGTAAAGGGACTGTTGTCACGTCTTCTCAAAGTT...TTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGGTTGTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039894.13 |
||
| CDS-3UTR GCA 90 bp | ATACAACCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGAGCCTCCTGTTGGGTaGCTGCATTTAAAATACATA | + |
|
Preference number: 4 (lower is better) Translates to: IQPNGLFPTKHNIICEGKEPPVG*LHLKYI Trigger: TATGTATTTTAAATGCAGGCACCCAACAGGAGGCTC...TTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGGTTGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039894.13 ENSMUST00000162326.2 |
||
| CDS-3UTR GCA 90 bp | AACCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGGTTGAGTCAGAGGGAAACTaGAGTTTATTTTCACTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: NQMVFSQQNITSFVRAKVESEGN*SLFSLR Trigger: TCTCAGTGAAAATAAACTGCAGTTTCCCTCTGACTC...AACCTTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039894.13 ENSMUST00000162326.2 |
||
| CDS-3UTR GCA 90 bp | ACTGCTTTTCTAATATTTGCCGTTCAGGTTGATTTGAGCATTTTATCTTCAGGGGGAACATGGATGTTTTaGATCCAATTTCAGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: TAFLIFAVQVDLSILSSGGTWMF*IQFQHL Trigger: CAGATGCTGAAATTGGATGCAAAACATCCATGTTCC...CCCTGAAGATAAAATGCTCAAATCAACCTGAACGGCAAATATTAGAAAAGCAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000162326.2 |
||
| CDS-3UTR CCA 90 bp | ACTGCTTTTCTAATATTTGCCGTTCAGGTTGATTTGAGCATTTTATCTTCAGGGAAAAGAGCCTCCTGTTaGGTGCCTGCATTTAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: TAFLIFAVQVDLSILSSGKRASC*VPAFKI Trigger: TATTTTAAATGCAGGCACCCAACAGGAGGCTCTTTT...CCCTGAAGATAAAATGCTCAAATCAACCTGAACGGCAAATATTAGAAAAGCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000162326.2 |
||
| CDS-3UTR CCA 90 bp | ATACAACCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAACTGCAGGACATTCACTaGCCTTTCAGAAATGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: IQPNGLFPTKHNIICEGKLQDIH*PFRNGN Trigger: ATTTCCATTTCTGAAAGGCCAGTGAATGTCCTGCAG...TTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGGTTGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039894.13 ENSMUST00000162326.2 |
||
| CDS-3UTR TCA 90 bp | CCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGGTTTTCAACTCTTCTACCAATaGCATCTAATGGCAAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: PNGLFPTKHNIICEGKGFQLFYQ*HLMAKC Trigger: ACATTTTGCCATTAGATGTCATTGGTAGAAGAGTTG...AAAACCTTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000039894.13 ENSMUST00000159893.8 ENSMUST00000162326.2 |
||
| CDS-3UTR TCA 90 bp | ACTGCTTTTCTAATATTTGCCGTTCAGGTTGATTTGAGCATTTTATCTTCAGGGCAACTCTTCTACCAATaGCATCTAATGGCAAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: TAFLIFAVQVDLSILSSGQLFYQ*HLMAKC Trigger: ACATTTTGCCATTAGATGTCATTGGTAGAAGAGTTG...CCCTGAAGATAAAATGCTCAAATCAACCTGAACGGCAAATATTAGAAAAGCAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000159893.8 ENSMUST00000162326.2 |
||
| CDS-3UTR GCA 90 bp | TACAACCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGACAAAAGCGCACTGTTaGATATTCTCCATTAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: YNQMVFSQQNITSFVRAKTKAHC*IFSINF Trigger: GAAGTTAATGGAGAATATGCAACAGTGCGCTTTTGT...CTTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGGTTGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039894.13 ENSMUST00000159893.8 ENSMUST00000162326.2 |
||
| CDS-3UTR CCA 90 bp | ATACAACCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAAAAAGAGCCTCCTGTTaGGTGCCTGCATTTAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: IQPNGLFPTKHNIICEGKKRASC*VPAFKI Trigger: TATTTTAAATGCAGGCACCCAACAGGAGGCTCTTTT...TTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGGTTGTAT 37% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000039894.13 ENSMUST00000162326.2 |
||
| CDS-3UTR CCA 90 bp | ATACAACCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGAAATTAACTTTGCTTaGACGAACAAAAGAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IQPNGLFPTKHNIICEGKEINFA*TNKRAS Trigger: GGAGGCTCTTTTGTTCGTCCAAGCAAAGTTAATTTC...TTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGGTTGTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039894.13 ENSMUST00000159893.8 ENSMUST00000162326.2 |
||
| 3UTR CAA 72 bp | CAACAAAACATAACATCATTTGTGAGGGCAAAGGTTTaGTTTCTGGTGTATACATTCCAGTCGTTAAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: QQNITSFVRAKV*FLVYTFQSLNS Trigger: AGAGTTTAACGACTGGAATGTATACACCAGAAACAAAACCTTTGCCCTCACAAATGATGTTATGTTTTGTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039894.13 ENSMUST00000159893.8 ENSMUST00000162326.2 |
||
| 3UTR CAA 72 bp | GCAACTGCTTTTCTAATATTTGCCGTTCAGGTTGATTaGAGCATTTTATCTTCAGGGTTAGTAGCTGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ATAFLIFAVQVD*SILSSGLVAVF Trigger: AAAAACAGCTACTAACCCTGAAGATAAAATGCTCAAATCAACCTGAACGGCAAATATTAGAAAAGCAGTTGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159893.8 ENSMUST00000162326.2 |
||
| CDS GCA 90 bp | CCGAAATTAACTTTGCTTGGACGAACAAAAGAGCCTCCTGTTGGGTaGCTGCCACAGGAGGAACAGCACCACAAAAGCGCACTGTTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: PKLTLLGRTKEPPVG*LPQEEQHHKSALLH Trigger: ATGCAACAGTGCGCTTTTGTGGTGCTGTTCCTCCTGTGGCAGGCACCCAACAGGAGGCTCTTTTGTTCGTCCAAGCAAAGTTAATTTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
||
| CDS TCA 90 bp | TATTCTGGACGTACTGCAGCAGAGAAGCTGGTATCTAGGATGGGCTaGGAGAAACGCTGCATTTGGCCTGTTTTTGTCTGGATCTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: YSGRTAAEKLVSRMG*EKRCIWPVFVWIWV Trigger: CACCCAGATCCAGACAAAAACAGGCCAAATGCAGCGTTTCTCTCAGCCCATCCTAGATACCAGCTTCTCTGCTGCAGTACGTCCAGAATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162326.2 |
||
| CDS CCA 90 bp | ATCTCCGAAATTAACTTTGCTTGGACGAACAAAAGAGCCTCCTGTTaGGTGCCTGCCACAGGAGGAACAGCACCACAAAAGCGCACTGTT | + |
|
Preference number: 5 (lower is better) Translates to: ISEINFAWTNKRASC*VPATGGTAPQKRTV Trigger: AACAGTGCGCTTTTGTGGTGCTGTTCCTCCTGTGGCAGGCACCCAACAGGAGGCTCTTTTGTTCGTCCAAGCAAAGTTAATTTCGGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
||
| CDS-3UTR CAA 90 bp | GTTAAACTCTTACGGTTGGACTGTTACCATCGCACTAGTAGGCAATCTCCATTTCAAAAGAGCCTCCTGTaGGGTGCCTGCCACAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VKLLRLDCYHRTSRQSPFQKSLL*GACHRR Trigger: CCTCCTGTGGCAGGCACCCAACAGGAGGCTCTTTTG...AAATGGAGATTGCCTACTAGTGCGATGGTAACAGTCCAACCGTAAGAGTTTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
||
| CDS TCA 90 bp | GGAAATATTGTTAGACTTGAGGTAAAGTTCCTCGAGGACTGGCCATaGAGGAGCACAGTGCAGCACCTCAGTCCACGTTATTCCTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: GNIVRLEVKFLEDWP*RSTVQHLSPRYSCF Trigger: AAAACAGGAATAACGTGGACTGAGGTGCTGCACTGTGCTCCTTCATGGCCAGTCCTCGAGGAACTTTACCTCAAGTCTAACAATATTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039894.13 ENSMUST00000162326.2 |
||
| CDS-3UTR CAA 90 bp | GTTAAACTCTTACGGTTGGACTGTTACCATCGCACTAGTAGGCAATCTCCATTTAGAGCCTCCAGGTCTTaGAGCTGCTCTGCAATAAGA | + |
|
Preference number: 5 (lower is better) Translates to: VKLLRLDCYHRTSRQSPFRASRS*SCSAIR Trigger: TCTTATTGCAGAGCAGCTCAAAGACCTGGAGGCTCT...AAATGGAGATTGCCTACTAGTGCGATGGTAACAGTCCAACCGTAAGAGTTTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162326.2 |
||
| CDS-3UTR CAA 90 bp | GTCGTTAAACTCTTACGGTTGGACTGTTACCATCGCACTAGTAGGCAATCTCCAAGAGAAACGCTGCATTaGGCCTGTTTTTGTCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: VVKLLRLDCYHRTSRQSPRETLH*ACFCLD Trigger: ATCCAGACAAAAACAGGCCAAATGCAGCGTTTCTCT...TGGAGATTGCCTACTAGTGCGATGGTAACAGTCCAACCGTAAGAGTTTAACGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162326.2 |
||
| CDS-3UTR CAA 90 bp | CCTTTTGAACTGTCATGGAGTCTGGCAACTGCTTTTCTAATATTTGCCGTTCAGTTTCCTCTCTCAGGATaGTCCCACTCAACTCCTAAC | + |
|
Preference number: 5 (lower is better) Translates to: PFELSWSLATAFLIFAVQFPLSG*SHSTPN Trigger: GTTAGGAGTTGAGTGGGACAATCCTGAGAGAGGAAA...CTGAACGGCAAATATTAGAAAAGCAGTTGCCAGACTCCATGACAGTTCAAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162326.2 |
||
| CDS-3UTR CAA 90 bp | CAACCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGGTGCATTTGGCCTGTTTTaGTCTGGATCTGGGTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QPNGLFPTKHNIICEGKGAFGLF*SGSGCP Trigger: TGGACACCCAGATCCAGACAAAAACAGGCCAAATGC...ACCTTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039894.13 ENSMUST00000162326.2 |
||
| CDS-3UTR CAA 90 bp | AACCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGGTTAGAGCCTCCAGGTCTTaGAGCTGCTCTGCAATAAGA | + |
|
Preference number: 5 (lower is better) Translates to: NQMVFSQQNITSFVRAKVRASRS*SCSAIR Trigger: TCTTATTGCAGAGCAGCTCAAAGACCTGGAGGCTCT...AACCTTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039894.13 ENSMUST00000162326.2 |
||
| CDS-3UTR CAA 90 bp | TCGTTAAACTCTTACGGTTGGACTGTTACCATCGCACTAGTAGGCAATCTCCATCATTCTGATATCTGGTaGTCATTGACTATGAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SLNSYGWTVTIALVGNLHHSDIW*SLTMRY Trigger: GTACCTCATAGTCAATGACAACCAGATATCAGAATG...ATGGAGATTGCCTACTAGTGCGATGGTAACAGTCCAACCGTAAGAGTTTAACGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162326.2 |
||
| CDS-3UTR CAA 90 bp | TACAACCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGGCATTTGGCCTGTTTTaGTCTGGATCTGGGTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: YNQMVFSQQNITSFVRAKAFGLF*SGSGCP Trigger: TGGACACCCAGATCCAGACAAAAACAGGCCAAATGC...CTTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGGTTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039894.13 ENSMUST00000162326.2 |
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| CDS-3UTR CAA 90 bp | TACAACCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGTTTCCTCTCTCAGGATaGTCCCACTCAACTCCTAAC | + |
|
Preference number: 5 (lower is better) Translates to: YNQMVFSQQNITSFVRAKFPLSG*SHSTPN Trigger: GTTAGGAGTTGAGTGGGACAATCCTGAGAGAGGAAA...CTTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGGTTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039894.13 ENSMUST00000162326.2 |
||
| CDS-3UTR CAA 90 bp | AACCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGGTTGCTGGCTTTCATCAATaGATGGGTTGGAGGAAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: NQMVFSQQNITSFVRAKVAGFHQ*MGWRKG Trigger: ACCTTTCCTCCAACCCATCAATTGATGAAAGCCAGC...AACCTTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039894.13 ENSMUST00000162326.2 |
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| CDS-3UTR CAA 90 bp | TACAACCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGGCTGGCTTTCATCAATaGATGGGTTGGAGGAAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: YNQMVFSQQNITSFVRAKAGFHQ*MGWRKG Trigger: ACCTTTCCTCCAACCCATCAATTGATGAAAGCCAGC...CTTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGGTTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039894.13 ENSMUST00000162326.2 |
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| CDS-3UTR CAA 90 bp | TACAACCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGTCTGCTTTGTCCGCTTaGCTCAAAGGGTTTCTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: YNQMVFSQQNITSFVRAKSALSA*LKGFLV Trigger: CACTAGAAACCCTTTGAGCAAAGCGGACAAAGCAGA...CTTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGGTTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039894.13 ENSMUST00000162326.2 |
||
| CDS-3UTR CAA 90 bp | ACTGCTTTTCTAATATTTGCCGTTCAGGTTGATTTGAGCATTTTATCTTCAGGGTCTGCTTTGTCCGCTTaGCTCAAAGGGTTTCTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: TAFLIFAVQVDLSILSSGSALSA*LKGFLV Trigger: CACTAGAAACCCTTTGAGCAAAGCGGACAAAGCAGA...CCCTGAAGATAAAATGCTCAAATCAACCTGAACGGCAAATATTAGAAAAGCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162326.2 |
||
| CDS-3UTR CAA 90 bp | CCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGGTTTTTCAGGTGCACCATATTaGCAGCAGAGAAGCTGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: PNGLFPTKHNIICEGKGFSGAPY*QQRSWY Trigger: ATACCAGCTTCTCTGCTGCAAATATGGTGCACCTGA...AAAACCTTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039894.13 |
||
| CDS-3UTR CAA 90 bp | TACAACCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGAGAGAAACGCTGCATTaGGCCTGTTTTTGTCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: YNQMVFSQQNITSFVRAKRETLH*ACFCLD Trigger: ATCCAGACAAAAACAGGCCAAATGCAGCGTTTCTCT...CTTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGGTTGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039894.13 ENSMUST00000162326.2 |
||
| CDS-3UTR CAA 90 bp | AACCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGGTTTCTGACACAGGAACTTaGAGAAGACGTGACAACAGT | + |
|
Preference number: 5 (lower is better) Translates to: NQMVFSQQNITSFVRAKVSDTGT*RRRDNS Trigger: ACTGTTGTCACGTCTTCTCAAAGTTCCTGTGTCAGA...AACCTTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039894.13 |
||
| CDS-3UTR CAA 90 bp | TACAACCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGTCATCAATTGATGGGTaGGAGGAAAGGTCTAGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: YNQMVFSQQNITSFVRAKSSIDG*EERSSN Trigger: GTTACTAGACCTTTCCTCCAACCCATCAATTGATGA...CTTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGGTTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039894.13 ENSMUST00000162326.2 |
||
| CDS-3UTR CAA 90 bp | TACAACCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGGGGAACATGGATGTTTaGCATCCAATTTCAGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: YNQMVFSQQNITSFVRAKGNMDV*HPISAS Trigger: AGATGCTGAAATTGGATGCAAAACATCCATGTTCCC...CTTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGGTTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039894.13 ENSMUST00000162326.2 |
||
| CDS-3UTR CAA 90 bp | CCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGGTTTTGGGAACATGGATGTTTaGCATCCAATTTCAGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: PNGLFPTKHNIICEGKGFGNMDV*HPISAS Trigger: AGATGCTGAAATTGGATGCAAAACATCCATGTTCCC...AAAACCTTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039894.13 ENSMUST00000162326.2 |
||
| CDS-3UTR CAA 90 bp | CAACCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGGTGATATCTGGTTGTCATaGACTATGAGGTACTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: QPNGLFPTKHNIICEGKGDIWLS*TMRYFK Trigger: CTTGAAGTACCTCATAGTCAATGACAACCAGATATC...ACCTTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039894.13 ENSMUST00000162326.2 |
||
| CDS-3UTR CAA 90 bp | ATACAACCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGCCGTTCAGGTTGATTaGAGCATTTTATCTTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: IQPNGLFPTKHNIICEGKAVQVD*SILSSG Trigger: CCCTGAAGATAAAATGCTCAAATCAACCTGAACGGC...TTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGGTTGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039894.13 |
||
| CDS-3UTR CAA 90 bp | CCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGGTTTTGATATCTGGTTGTCATaGACTATGAGGTACTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: PNGLFPTKHNIICEGKGFDIWLS*TMRYFK Trigger: CTTGAAGTACCTCATAGTCAATGACAACCAGATATC...AAAACCTTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039894.13 ENSMUST00000162326.2 |
||
| CDS-3UTR CAA 90 bp | CCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGGTTTTCATTCTGATATCTGGTaGTCATTGACTATGAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: PNGLFPTKHNIICEGKGFHSDIW*SLTMRY Trigger: GTACCTCATAGTCAATGACAACCAGATATCAGAATG...AAAACCTTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039894.13 ENSMUST00000162326.2 |
||
| CDS-3UTR CAA 90 bp | CCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGGTTTTCACGTTATTCCTGTTTaGTTTAGGACTAAAGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PNGLFPTKHNIICEGKGFHVIPV*FRTKVF Trigger: GAAGACTTTAGTCCTAAACAAAACAGGAATAACGTG...AAAACCTTTGCCCTCACAAATGATGTTATGTTTTGTTGGGAAAAGACCATTTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039894.13 ENSMUST00000162326.2 |
||
| CDS GCA 72 bp | ACTTTGCTTGGACGAACAAAAGAGCCTCCTGTTGGGTaGCTGCCACAGGAGGAACAGCACCACAAAAGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: TLLGRTKEPPVG*LPQEEQHHKSA Trigger: TGCGCTTTTGTGGTGCTGTTCCTCCTGTGGCAGGCACCCAACAGGAGGCTCTTTTGTTCGTCCAAGCAAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
||
| CDS TCA 72 bp | GTTAGACTTGAGGTAAAGTTCCTCGAGGACTGGCCATaGAGGAGCACAGTGCAGCACCTCAGTCCACGTTAT | + |
|
Preference number: 6 (lower is better) Translates to: VRLEVKFLEDWP*RSTVQHLSPRY Trigger: ATAACGTGGACTGAGGTGCTGCACTGTGCTCCTTCATGGCCAGTCCTCGAGGAACTTTACCTCAAGTCTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039894.13 ENSMUST00000162326.2 |
||
| CDS CCA 72 bp | CTGGACGTACTGCAGCAGAGAAGCTGGTATCTAGGATaGGCTGAGAGAAACGCTGCATTTGGCCTGTTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: LDVLQQRSWYLG*AERNAAFGLFL Trigger: CAAAAACAGGCCAAATGCAGCGTTTCTCTCAGCCCATCCTAGATACCAGCTTCTCTGCTGCAGTACGTCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162326.2 |
||
| CDS CCA 72 bp | ATTAACTTTGCTTGGACGAACAAAAGAGCCTCCTGTTaGGTGCCTGCCACAGGAGGAACAGCACCACAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: INFAWTNKRASC*VPATGGTAPQK Trigger: CTTTTGTGGTGCTGTTCCTCCTGTGGCAGGCACCCAACAGGAGGCTCTTTTGTTCGTCCAAGCAAAGTTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159893.8 |
||
| CDS CCA 72 bp | GTGCACCATATTCTGGACGTACTGCAGCAGAGAAGCTaGTATCTAGGATGGGCTGAGAGAAACGCTGCATTT | + |
|
Preference number: 6 (lower is better) Translates to: VHHILDVLQQRS*YLGWAERNAAF Trigger: AAATGCAGCGTTTCTCTCAGCCCATCCTAGATACCAGCTTCTCTGCTGCAGTACGTCCAGAATATGGTGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162326.2 |
||
| CDS GCA 72 bp | GATGGGTTGGAGGAAAGGTCTAGTAACCTCATTTTCTaGAGGACATTCACTGGCCTTTCAGAAATGGAAATA | + |
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Preference number: 6 (lower is better) Translates to: DGLEERSSNLIF*RTFTGLSEMEI Trigger: TATTTCCATTTCTGAAAGGCCAGTGAATGTCCTGCAGAAAATGAGGTTACTAGACCTTTCCTCCAACCCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039894.13 ENSMUST00000162326.2 |
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| CDS CAA 72 bp | GCACAGTGCAGCACCTCAGTCCACGTTATTCCTGTTTaGTTTAGGACTAAAGTCTTCAGAGTAGAAAATGTT | + |
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Preference number: 6 (lower is better) Translates to: AQCSTSVHVIPV*FRTKVFRVENV Trigger: AACATTTTCTACTCTGAAGACTTTAGTCCTAAACAAAACAGGAATAACGTGGACTGAGGTGCTGCACTGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039894.13 ENSMUST00000162326.2 |
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