Pregenerated sensors for TBCCD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004462Ensembl transcript IDs: ENSMUST00000004576.8, ENSMUST00000231229.2, ENSMUST00000232075.2, ENSMUST00000232251.2, ENSMUST00000232345.2
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GATCCTCACCATGTAGAGCAGGCTGGCCTGGAACTTGCAGAGATCTaGCTGCCTCTGCCTGCTGAGCCCTGGGACTACAAGTATGTGCCA | + |
|
Preference number: 1 (lower is better) Translates to: DPHHVEQAGLELAEI*LPLPAEPWDYKYVP Trigger: TGGCACATACTTGTAGTCCCAGGGCTCAGCAGGCAGAGGCAGGCAGATCTCTGCAAGTTCCAGGCCAGCCTGCTCTACATGGTGAGGATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| 3UTR TCA 90 bp | TTCCTCCTCACGTTTCCAGAGCCCTACAATCCCAGCACATGGCACTaGGGCAGGAGGGCTGTTACAAGTTCAAGGCCAGCCTGCACTCCA | + |
|
Preference number: 1 (lower is better) Translates to: FLLTFPEPYNPSTWH*GRRAVTSSRPACTP Trigger: TGGAGTGCAGGCTGGCCTTGAACTTGTAACAGCCCTCCTGCCTCAGTGCCATGTGCTGGGATTGTAGGGCTCTGGAAACGTGAGGAGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231229.2 |
||
| 3UTR TCA 90 bp | GTACAGAACAGGAACCAGCAAAAGGTCTTGAATACAGAGAAGCCTTaGGGTCTCGCAGGCAGCAAGGATGCCTTTCCAACAGGCTTCAGG | + |
|
Preference number: 1 (lower is better) Translates to: VQNRNQQKVLNTEKP*GLAGSKDAFPTGFR Trigger: CCTGAAGCCTGTTGGAAAGGCATCCTTGCTGCCTGCGAGACCTCAAGGCTTCTCTGTATTCAAGACCTTTTGCTGGTTCCTGTTCTGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004576.8 ENSMUST00000231229.2 ENSMUST00000232075.2 |
||
| 3UTR TCA 90 bp | CACATGATGGCTTACAACTGTCTGATACTCCGGTCCCAGGAGACCTaGTGTGCTCTGATCTCCTCACATCTGGCATACATGTGGTGCACA | + |
|
Preference number: 1 (lower is better) Translates to: HMMAYNCLILRSQET*CALISSHLAYMWCT Trigger: TGTGCACCACATGTATGCCAGATGTGAGGAGATCAGAGCACATCAGGTCTCCTGGGACCGGAGTATCAGACAGTTGTAAGCCATCATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232345.2 |
||
| 3UTR TCA 90 bp | CTTGAAAGCAGCAAGTTAATTTCTATTTTAAAGCAGTGTGAGGGCTaGGGAGTTGTTTCAGCAGTTAAGGGCACTTGTTGCTCTTGTAGA | + |
|
Preference number: 1 (lower is better) Translates to: LESSKLISILKQCEG*GVVSAVKGTCCSCR Trigger: TCTACAAGAGCAACAAGTGCCCTTAACTGCTGAAACAACTCCTCAGCCCTCACACTGCTTTAAAATAGAAATTAACTTGCTGCTTTCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232345.2 |
||
| 3UTR TCA 90 bp | AAGATGCTTTATGAAGTCAGAAGTTTGGCTAAAGTTCAACCTAGGTaGGTACAGAACAGGAACCAGCAAAAGGTCTTGAATACAGAGAAG | + |
|
Preference number: 1 (lower is better) Translates to: KMLYEVRSLAKVQPR*VQNRNQQKVLNTEK Trigger: CTTCTCTGTATTCAAGACCTTTTGCTGGTTCCTGTTCTGTACTCACCTAGGTTGAACTTTAGCCAAACTTCTGACTTCATAAAGCATCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004576.8 ENSMUST00000231229.2 ENSMUST00000232075.2 |
||
| 3UTR-3UTR GCA 90 bp | GCTGGTCAGCTCACAACCACCTCAAACTCCAGCTCCAGGGGAGCTGGCACCTTGTGGAACTGCTTCCTCTaGTCCTTTGTCAAACGAGCC | + |
|
Preference number: 2 (lower is better) Translates to: AGQLTTTSNSSSRGAGTLWNCFL*SFVKRA Trigger: GGCTCGTTTGACAAAGGAGCAGAGGAAGCAGTTCCA...CAAGGTGCCAGCTCCCCTGGAGCTGGAGTTTGAGGTGGTTGTGAGCTGACCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232345.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGAGAAGCCTTGAGGTCTCGCAGGCAGCAAGGATGCCTTTCCAACAGGCTTCACATAGGAAGACCCCGTaGCTCCATGTGGTCCTATGC | + |
|
Preference number: 2 (lower is better) Translates to: QRSLEVSQAARMPFQQASHRKTP*LHVVLC Trigger: GCATAGGACCACATGGAGCCACGGGGTCTTCCTATG...TGAAGCCTGTTGGAAAGGCATCCTTGCTGCCTGCGAGACCTCAAGGCTTCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231229.2 |
||
| 3UTR-3UTR CCA 90 bp | GCAGTTAAGGGCACTTGTTGCTCTTGTAGAAGACTCAGGTCGGATTCCAGGCACGGGGAGCTGGCACCTTaGCCTTCTCTAGGCACACAC | + |
|
Preference number: 2 (lower is better) Translates to: AVKGTCCSCRRLRSDSRHGELAP*PSLGTH Trigger: GTGTGTGCCTAGAGAAGGCCAAGGTGCCAGCTCCCC...GTGCCTGGAATCCGACCTGAGTCTTCTACAAGAGCAACAAGTGCCCTTAACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232345.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGAGAAGCCTTGAGGTCTCGCAGGCAGCAAGGATGCCTTTCCAACAGGCTTCAAATACAGAGAAGCCTTaGGGTCTCGCAGGCAGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: QRSLEVSQAARMPFQQASNTEKP*GLAGSK Trigger: CTTGCTGCCTGCGAGACCTCAAGGCTTCTCTGTATT...TGAAGCCTGTTGGAAAGGCATCCTTGCTGCCTGCGAGACCTCAAGGCTTCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004576.8 ENSMUST00000231229.2 ENSMUST00000232075.2 |
||
| 3UTR-3UTR CCA 90 bp | GCCTACCCGTGGCTCCATGTGGTCCTATGCAGCCACTTGTCAGGAGGCTGCTGGATTTTTCAATTGTCATaGATCGTAAGGGGGAGAGCA | + |
|
Preference number: 2 (lower is better) Translates to: AYPWLHVVLCSHLSGGCWIFQLS*IVRGRA Trigger: TGCTCTCCCCCTTACGATCCATGACAATTGAAAAAT...CCAGCAGCCTCCTGACAAGTGGCTGCATAGGACCACATGGAGCCACGGGTAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000232345.2 |
||
| 3UTR-3UTR TCA 90 bp | CCGTTTCAGCCCCAGCCGTGTGACCTCCTGACCTTCTACAGTAAGATGCTTTATAATACAGAGAAGCCTTaGGGTCTCGCAGGCAGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: PFQPQPCDLLTFYSKMLYNTEKP*GLAGSK Trigger: CTTGCTGCCTGCGAGACCTCAAGGCTTCTCTGTATT...ATAAAGCATCTTACTGTAGAAGGTCAGGAGGTCACACGGCTGGGGCTGAAACGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004576.8 ENSMUST00000231229.2 ENSMUST00000232075.2 |
||
| 3UTR-3UTR GCA 90 bp | TTCTGTTTTGCATGCCAAAGGGTTCCCAACAGTCTCGTAGGTGCCCGTGTTCTCACTAGGGCCTGGAACTaGTTCCTCTGCTCCTTTGTC | + |
|
Preference number: 2 (lower is better) Translates to: FCFACQRVPNSLVGARVLTRAWN*FLCSFV Trigger: GACAAAGGAGCAGAGGAAGCAGTTCCAGGCCCTAGT...GAGAACACGGGCACCTACGAGACTGTTGGGAACCCTTTGGCATGCAAAACAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232345.2 |
||
| 3UTR-3UTR CCA 90 bp | GCCTACCCGTGGCTCCATGTGGTCCTATGCAGCCACTTGTCAGGAGGCTGCTGGCAATCTTGGCTCTTTTaGTCGAACCTTCAAATTTTC | + |
|
Preference number: 2 (lower is better) Translates to: AYPWLHVVLCSHLSGGCWQSWLF*SNLQIF Trigger: GAAAATTTGAAGGTTCGACCAAAAGAGCCAAGATTG...CCAGCAGCCTCCTGACAAGTGGCTGCATAGGACCACATGGAGCCACGGGTAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232345.2 |
||
| 3UTR-3UTR TCA 90 bp | GCAGTTAAGGGCACTTGTTGCTCTTGTAGAAGACTCAGGTCGGATTCCAGGCACAGACCTGATGTGCTCTaGTCTCCTCACATCTGGCAT | + |
|
Preference number: 2 (lower is better) Translates to: AVKGTCCSCRRLRSDSRHRPDVL*SPHIWH Trigger: ATGCCAGATGTGAGGAGATCAGAGCACATCAGGTCT...GTGCCTGGAATCCGACCTGAGTCTTCTACAAGAGCAACAAGTGCCCTTAACTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232345.2 |
||
| 3UTR CAA 90 bp | AGTACAGAACAGGAACCAGCAAAAGGTCTTGAATACAGAGAAGCCTaGAGGTCTCGCAGGCAGCAAGGATGCCTTTCCAACAGGCTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: STEQEPAKGLEYREA*RSRRQQGCLSNRLQ Trigger: CTGAAGCCTGTTGGAAAGGCATCCTTGCTGCCTGCGAGACCTCAAGGCTTCTCTGTATTCAAGACCTTTTGCTGGTTCCTGTTCTGTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004576.8 ENSMUST00000231229.2 ENSMUST00000232075.2 |
||
| 3UTR-3UTR TCA 90 bp | GTTCCGTTTCAGCCCCAGCCGTGTGACCTCCTGACCTTCTACAGTAAGATGCTTACCAGCAAAAGGTCTTaGATACAGAGAAGCCTTGAG | + |
|
Preference number: 2 (lower is better) Translates to: VPFQPQPCDLLTFYSKMLTSKRS*IQRSLE Trigger: CTCAAGGCTTCTCTGTATTCAAGACCTTTTGCTGGT...AAGCATCTTACTGTAGAAGGTCAGGAGGTCACACGGCTGGGGCTGAAACGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004576.8 ENSMUST00000231229.2 ENSMUST00000232075.2 |
||
| 3UTR-3UTR TCA 90 bp | GAGACCCCCAGGTATCTCTGCTGTGTCCCCTTCCATCTCAAAGGGAATAACAAAAACCGAGGAGCCATGTaGGCATTGCAAGCAATCTTG | + |
|
Preference number: 2 (lower is better) Translates to: ETPRYLCCVPFHLKGNNKNRGAM*ALQAIL Trigger: CAAGATTGCTTGCAATGCTCACATGGCTCCTCGGTT...TTTGTTATTCCCTTTGAGATGGAAGGGGACACAGCAGAGATACCTGGGGGTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000232345.2 |
||
| 3UTR-3UTR TCA 90 bp | CTCAAAGGGAATAACAAATATGTAGAACTCAGAAGGAGGCAAGAGCCGGAAGAGGACTCACTGCAGCGATaGGCCCTGACATGTGCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: LKGNNKYVELRRRQEPEEDSLQR*ALTCAP Trigger: AGGAGCACATGTCAGGGCTCATCGCTGCAGTGAGTC...CTCTTCCGGCTCTTGCCTCCTTCTGAGTTCTACATATTTGTTATTCCCTTTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232345.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGAGAGTAGCAAGTTACAAAGAACCACACAACTGTTCTTTCTTTTCCTTCCTTAGATCTGCCTGCCTCTaGCTGCTGAGCCCTGGGACT | + |
|
Preference number: 2 (lower is better) Translates to: KRVASYKEPHNCSFFSFLRSACL*LLSPGT Trigger: AGTCCCAGGGCTCAGCAGGCAGAGGCAGGCAGATCT...AAGGAAGGAAAAGAAAGAACAGTTGTGTGGTTCTTTGTAACTTGCTACTCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| 3UTR-3UTR TCA 90 bp | ATCTCTGCCATATTTATGCACCAACTGACCATTCTGTCACTCTTTTTAAAAAGATCAGCCCCAGCCGTGTaGCCTCCTGACCTTCTACAG | + |
|
Preference number: 2 (lower is better) Translates to: ISAIFMHQLTILSLFLKRSAPAV*PPDLLQ Trigger: CTGTAGAAGGTCAGGAGGTCACACGGCTGGGGCTGA...TCTTTTTAAAAAGAGTGACAGAATGGTCAGTTGGTGCATAAATATGGCAGAGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| 3UTR-3UTR TCA 90 bp | TGCCATATTTATGCACCAACTGACCATTCTGTCACTCTTTTTAAAAAGAGAGTACCTGCCTCTGCCTGCTaGGCCCTGGGACTACAAGTA | + |
|
Preference number: 2 (lower is better) Translates to: CHIYAPTDHSVTLFKKRVPASAC*ALGLQV Trigger: TACTTGTAGTCCCAGGGCTCAGCAGGCAGAGGCAGG...TACTCTCTTTTTAAAAAGAGTGACAGAATGGTCAGTTGGTGCATAAATATGGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| 3UTR-3UTR GCA 90 bp | GTTCCGTTTCAGCCCCAGCCGTGTGACCTCCTGACCTTCTACAGTAAGATGCTTCCTTCTACAGTAAGATaGTTTATGAAGTCAGAAGTT | + |
|
Preference number: 2 (lower is better) Translates to: VPFQPQPCDLLTFYSKMLPSTVR*FMKSEV Trigger: AACTTCTGACTTCATAAAGCATCTTACTGTAGAAGG...AAGCATCTTACTGTAGAAGGTCAGGAGGTCACACGGCTGGGGCTGAAACGGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004576.8 ENSMUST00000231229.2 ENSMUST00000232075.2 |
||
| 3UTR-3UTR GCA 90 bp | CCACAGGACCCAACACAAAGGTACTATTCCTGCATTTTTCAATTGTCATGGATCGAGCCATGTGAGCATTaGAAGCAATCTTGGCTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: PQDPTQRYYSCIFQLSWIEPCEH*KQSWLF Trigger: AAAGAGCCAAGATTGCTTGCAATGCTCACATGGCTC...GATCCATGACAATTGAAAAATGCAGGAATAGTACCTTTGTGTTGGGTCCTGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232345.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTCAGCCCCAGCCGTGTGACCTCCTGACCTTCTACAGTAAGATGCTTTATGAACCTTCTACAGTAAGATaGTTTATGAAGTCAGAAGTT | + |
|
Preference number: 2 (lower is better) Translates to: FQPQPCDLLTFYSKMLYEPSTVR*FMKSEV Trigger: AACTTCTGACTTCATAAAGCATCTTACTGTAGAAGG...TTCATAAAGCATCTTACTGTAGAAGGTCAGGAGGTCACACGGCTGGGGCTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004576.8 ENSMUST00000231229.2 ENSMUST00000232075.2 |
||
| 3UTR-3UTR CCA 90 bp | TATCTCTGCCATATTTATGCACCAACTGACCATTCTGTCACTCTTTTTAAAAAGCCATGTAGAGCAGGCTaGCCTGGAACTTGCAGAGAT | + |
|
Preference number: 2 (lower is better) Translates to: YLCHIYAPTDHSVTLFKKPCRAG*PGTCRD Trigger: ATCTCTGCAAGTTCCAGGCCAGCCTGCTCTACATGG...CTTTTTAAAAAGAGTGACAGAATGGTCAGTTGGTGCATAAATATGGCAGAGATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| 3UTR-3UTR TCA 90 bp | AGACAGGAAAGAATCATTAGAGATGAAGTACAGAACTTAATGCCTGAGCTGGAGGAAGGTGTCATAATGTaGAAGGTGCAGCTTGTTGTA | + |
|
Preference number: 2 (lower is better) Translates to: RQERIIRDEVQNLMPELEEGVIM*KVQLVV Trigger: TACAACAAGCTGCACCTTTCACATTATGACACCTTC...CTCCAGCTCAGGCATTAAGTTCTGTACTTCATCTCTAATGATTCTTTCCTGTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232345.2 |
||
| 3UTR-3UTR TCA 90 bp | AACTATCTCTGCCATATTTATGCACCAACTGACCATTCTGTCACTCTTTTTAAAACCAGCAAAAGGTCTTaGATACAGAGAAGCCTTGAG | + |
|
Preference number: 2 (lower is better) Translates to: NYLCHIYAPTDHSVTLFKTSKRS*IQRSLE Trigger: CTCAAGGCTTCTCTGTATTCAAGACCTTTTGCTGGT...TTTAAAAAGAGTGACAGAATGGTCAGTTGGTGCATAAATATGGCAGAGATAGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| 3UTR-3UTR TCA 90 bp | AACTATCTCTGCCATATTTATGCACCAACTGACCATTCTGTCACTCTTTTTAAATTGTTTGCTTGTTTCTaGGACACAGGATCCTCACCA | + |
|
Preference number: 2 (lower is better) Translates to: NYLCHIYAPTDHSVTLFKLFACF*DTGSSP Trigger: TGGTGAGGATCCTGTGTCTCAGAAACAAGCAAACAA...TTTAAAAAGAGTGACAGAATGGTCAGTTGGTGCATAAATATGGCAGAGATAGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| 3UTR-3UTR GCA 90 bp | GACCTCCTGACCTTCTACAGTAAGATGCTTTATGAAGTCAGAAGTTTGGCTAAACCTTCTACAGTAAGATaGTTTATGAAGTCAGAAGTT | + |
|
Preference number: 2 (lower is better) Translates to: DLLTFYSKMLYEVRSLAKPSTVR*FMKSEV Trigger: AACTTCTGACTTCATAAAGCATCTTACTGTAGAAGG...TTTAGCCAAACTTCTGACTTCATAAAGCATCTTACTGTAGAAGGTCAGGAGGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004576.8 ENSMUST00000231229.2 ENSMUST00000232075.2 |
||
| 3UTR GCA 72 bp | GTTCTCAATGCCTACCCGTGGCTCCATGTGGTCCTATaGAGCCACTTGTCAGGAGGCTGCTGGAGTGGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: VLNAYPWLHVVL*SHLSGGCWSGH Trigger: GTGCCCACTCCAGCAGCCTCCTGACAAGTGGCTGCATAGGACCACATGGAGCCACGGGTAGGCATTGAGAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232345.2 |
||
| 3UTR CCA 72 bp | GTGCCCGTGTTCTCAATGCCTACCCGTGGCTCCATGTaGTCCTATGCAGCCACTTGTCAGGAGGCTGCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: VPVFSMPTRGSM*SYAATCQEAAG Trigger: TCCAGCAGCCTCCTGACAAGTGGCTGCATAGGACCACATGGAGCCACGGGTAGGCATTGAGAACACGGGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232345.2 |
||
| 3UTR GCA 72 bp | GTACTGGTCACTGAGACACTAACTTACACACAGAGCTaGTGTGCCCAGTGTTCCGTTTCAGCCCCAGCCGTG | + |
|
Preference number: 3 (lower is better) Translates to: VLVTETLTYTQS*CAQCSVSAPAV Trigger: CACGGCTGGGGCTGAAACGGAACACTGGGCACAGCAGCTCTGTGTGTAAGTTAGTGTCTCAGTGACCAGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004576.8 ENSMUST00000231229.2 ENSMUST00000232075.2 |
||
| 3UTR CCA 72 bp | CCCAGAGGACCCGAGTTCAATTTCCAGCACCAAAGCTaGTCAGCTCACAACCACCTCAAACTCCAGCTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: PRGPEFNFQHQS*SAHNHLKLQLQ Trigger: CTGGAGCTGGAGTTTGAGGTGGTTGTGAGCTGACCAGCTTTGGTGCTGGAAATTGAACTCGGGTCCTCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232345.2 |
||
| 3UTR GCA 72 bp | TTTTGCATGCCAAAGGGTTCCCAACAGTCTCGTAGGTaGCCGTGTTCTCAATGCCTACCCGTGGCTCCATGT | + |
|
Preference number: 3 (lower is better) Translates to: FCMPKGSQQSRR*PCSQCLPVAPC Trigger: ACATGGAGCCACGGGTAGGCATTGAGAACACGGGCACCTACGAGACTGTTGGGAACCCTTTGGCATGCAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232345.2 |
||
| 3UTR GCA 72 bp | CAACTGTCTGATACTCCGGTCCCAGGAGACCTGATGTaGTCTGATCTCCTCACATCTGGCATACATGTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: QLSDTPVPGDLM*SDLLTSGIHVV Trigger: CACCACATGTATGCCAGATGTGAGGAGATCAGAGCACATCAGGTCTCCTGGGACCGGAGTATCAGACAGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232345.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAGTTAAGGGCACTTGTTGCTCTTGTAGAAGACTCAGGTCGGATTCCAGGCACTGTGGTCCTCCAGCATaGGGTAATGGGTATGAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: AVKGTCCSCRRLRSDSRHCGPPA*GNGYER Trigger: CCTTTCATACCCATTACCCAATGCTGGAGGACCACA...GTGCCTGGAATCCGACCTGAGTCTTCTACAAGAGCAACAAGTGCCCTTAACTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232345.2 |
||
| 3UTR TCA 72 bp | AAATGTGGAGTCAGCTGGGAAGCCTGTACTGGTCACTaGGACACTAACTTACACACAGAGCTGCTGTGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: KCGVSWEACTGH*DTNLHTELLCP Trigger: TGGGCACAGCAGCTCTGTGTGTAAGTTAGTGTCTCAGTGACCAGTACAGGCTTCCCAGCTGACTCCACATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004576.8 ENSMUST00000231229.2 ENSMUST00000232075.2 |
||
| 3UTR TCA 72 bp | AGAACTCAGAAGGAGGCAAGAGCCGGAAGAGACTTGTaGCAGAGCCTTCTTTGCACACCACCATCGGGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: RTQKEARAGRDL*QSLLCTPPSGY Trigger: ATAACCCGATGGTGGTGTGCAAAGAAGGCTCTGTCACAAGTCTCTTCCGGCTCTTGCCTCCTTCTGAGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232345.2 |
||
| 3UTR TCA 72 bp | GCTTACAACTGTCTGATACTCCGGTCCCAGGAGACCTaGTGTGCTCTGATCTCCTCACATCTGGCATACATG | + |
|
Preference number: 3 (lower is better) Translates to: AYNCLILRSQET*CALISSHLAYM Trigger: CATGTATGCCAGATGTGAGGAGATCAGAGCACATCAGGTCTCCTGGGACCGGAGTATCAGACAGTTGTAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232345.2 |
||
| 3UTR TCA 72 bp | CTAGGTGAGTACAGAACAGGAACCAGCAAAAGGTCTTaGATACAGAGAAGCCTTGAGGTCTCGCAGGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LGEYRTGTSKRS*IQRSLEVSQAA Trigger: TGCTGCCTGCGAGACCTCAAGGCTTCTCTGTATTCAAGACCTTTTGCTGGTTCCTGTTCTGTACTCACCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004576.8 ENSMUST00000231229.2 ENSMUST00000232075.2 |
||
| 3UTR TCA 72 bp | CCAGTGTTCCGTTTCAGCCCCAGCCGTGTGACCTCCTaGCCTTCTACAGTAAGATGCTTTATGAAGTCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: PVFRFSPSRVTS*PSTVRCFMKSE Trigger: TTCTGACTTCATAAAGCATCTTACTGTAGAAGGTCAGGAGGTCACACGGCTGGGGCTGAAACGGAACACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004576.8 ENSMUST00000231229.2 ENSMUST00000232075.2 |
||
| 3UTR GCA 72 bp | TGTGCTCTGATCTCCTCACATCTGGCATACATGTGGTaGACAGACAGACATGAAGGCAAACCACTCAGACTC | + |
|
Preference number: 3 (lower is better) Translates to: CALISSHLAYMW*TDRHEGKPLRL Trigger: GAGTCTGAGTGGTTTGCCTTCATGTCTGTCTGTGCACCACATGTATGCCAGATGTGAGGAGATCAGAGCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232345.2 |
||
| 3UTR GCA 72 bp | TCGTCTCCACAGGACCCAACACAAAGGTACTATTCCTaGATTTTTCAATTGTCATGGATCGTAAGGGGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SSPQDPTQRYYS*IFQLSWIVRGR Trigger: TCTCCCCCTTACGATCCATGACAATTGAAAAATGCAGGAATAGTACCTTTGTGTTGGGTCCTGTGGAGACGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000232345.2 |
||
| 3UTR TCA 72 bp | AGCAAGTTAATTTCTATTTTAAAGCAGTGTGAGGGCTaGGGAGTTGTTTCAGCAGTTAAGGGCACTTGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: SKLISILKQCEG*GVVSAVKGTCC Trigger: GCAACAAGTGCCCTTAACTGCTGAAACAACTCCTCAGCCCTCACACTGCTTTAAAATAGAAATTAACTTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232345.2 |
||
| 3UTR-3UTR CAA 90 bp | AGACAGGAAAGAATCATTAGAGATGAAGTACAGAACTTAATGCCTGAGCTGGAGGTTTTCTTTTCTGTTTaGCATGCCAAAGGGTTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: RQERIIRDEVQNLMPELEVFFSV*HAKGFP Trigger: TGGGAACCCTTTGGCATGCAAAACAGAAAAGAAAAC...CTCCAGCTCAGGCATTAAGTTCTGTACTTCATCTCTAATGATTCTTTCCTGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232345.2 |
||
| 3UTR-3UTR CAA 90 bp | GACCTCCTGACCTTCTACAGTAAGATGCTTTATGAAGTCAGAAGTTTGGCTAAATATGAAGTCAGAAGTTaGGCTAAAGTTCAACCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: DLLTFYSKMLYEVRSLAKYEVRS*AKVQPR Trigger: CCTAGGTTGAACTTTAGCCAAACTTCTGACTTCATA...TTTAGCCAAACTTCTGACTTCATAAAGCATCTTACTGTAGAAGGTCAGGAGGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004576.8 ENSMUST00000231229.2 ENSMUST00000232075.2 |
||
| 3UTR TCA 72 bp | TATGAAGTCAGAAGTTTGGCTAAAGTTCAACCTAGGTaGGTACAGAACAGGAACCAGCAAAAGGTCTTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: YEVRSLAKVQPR*VQNRNQQKVLN Trigger: ATTCAAGACCTTTTGCTGGTTCCTGTTCTGTACTCACCTAGGTTGAACTTTAGCCAAACTTCTGACTTCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004576.8 ENSMUST00000231229.2 ENSMUST00000232075.2 |
||
| CDS-3UTR TCA 90 bp | GCCTACCCGTGGCTCCATGTGGTCCTATGCAGCCACTTGTCAGGAGGCTGCTGGCTGCTGTGGGTCGAGTaGAAGGAGGCAGTGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AYPWLHVVLCSHLSGGCWLLWVE*KEAVSC Trigger: GCAGCTCACTGCCTCCTTTCACTCGACCCACAGCAG...CCAGCAGCCTCCTGACAAGTGGCTGCATAGGACCACATGGAGCCACGGGTAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232345.2 |
||
| CDS-3UTR GCA 90 bp | GCCTACCCGTGGCTCCATGTGGTCCTATGCAGCCACTTGTCAGGAGGCTGCTGGAAGCCACTTGCTACGTaGAGTGGTTGCCACAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: AYPWLHVVLCSHLSGGCWKPLAT*SGCHSA Trigger: TGCACTGTGGCAACCACTGCACGTAGCAAGTGGCTT...CCAGCAGCCTCCTGACAAGTGGCTGCATAGGACCACATGGAGCCACGGGTAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232345.2 |
||
| CDS-3UTR GCA 90 bp | GCCTACCCGTGGCTCCATGTGGTCCTATGCAGCCACTTGTCAGGAGGCTGCTGGAGAGGCCCTCAACCATaGTTCCAGCTTGTAGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AYPWLHVVLCSHLSGGCWRGPQP*FQLVER Trigger: TCTCTCTACAAGCTGGAAGCATGGTTGAGGGCCTCT...CCAGCAGCCTCCTGACAAGTGGCTGCATAGGACCACATGGAGCCACGGGTAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232345.2 |
||
| CDS-3UTR TCA 90 bp | CAGGGGCATCACCTTCCGTTCCTCCTCACGTTTCCAGAGCCCCGTGGCTCCATGCAGCTCGAGGAGCTCTaGCAGATGATTACAGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: QGHHLPFLLTFPEPRGSMQLEEL*QMITDK Trigger: TTTGTCTGTAATCATCTGTCAGAGCTCCTCGAGCTG...CATGGAGCCACGGGGCTCTGGAAACGTGAGGAGGAACGGAAGGTGATGCCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR TCA 90 bp | GCTGGTCAGCTCACAACCACCTCAAACTCCAGCTCCAGGGGAGCTGGCACCTTGGATGCAGAGGCTTGGTaGGCCCAAGCCAATTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AGQLTTTSNSSSRGAGTLDAEAW*AQANFF Trigger: AAAGAAATTGGCTTGGGCTCACCAAGCCTCTGCATC...CAAGGTGCCAGCTCCCCTGGAGCTGGAGTTTGAGGTGGTTGTGAGCTGACCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232345.2 |
||
| CDS-3UTR GCA 90 bp | TCAGGGGCATCACCTTCCGTTCCTCCTCACGTTTCCAGAGCCCCGTGGCTCCATTGGAACTGCTTCCTCTaGTCCTTTGTCAAACGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SGASPSVPPHVSRAPWLHWNCFL*SFVKRA Trigger: GGCTCGTTTGACAAAGGAGCAGAGGAAGCAGTTCCA...ATGGAGCCACGGGGCTCTGGAAACGTGAGGAGGAACGGAAGGTGATGCCCCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGTCAGCTCACAACCACCTCAAACTCCAGCTCCAGGGGAGCTGGCACCTTGACTTGCTACGTGCAGTaGTTGCCACAGTGCAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: AGQLTTTSNSSSRGAGTLTCYVQ*LPQCKL Trigger: CAACTTGCACTGTGGCAACCACTGCACGTAGCAAGT...CAAGGTGCCAGCTCCCCTGGAGCTGGAGTTTGAGGTGGTTGTGAGCTGACCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232345.2 |
||
| CDS-3UTR TCA 90 bp | GCCTACCCGTGGCTCCATGTGGTCCTATGCAGCCACTTGTCAGGAGGCTGCTGGTTCCAATTCTTATTGTaGCAACTGGGCCTTTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: AYPWLHVVLCSHLSGGCWFQFLL*QLGLSA Trigger: GGCTGAAAGGCCCAGTTGTCACAATAAGAATTGGAA...CCAGCAGCCTCCTGACAAGTGGCTGCATAGGACCACATGGAGCCACGGGTAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232345.2 |
||
| CDS-3UTR TCA 90 bp | CTTGAATACAGAGAAGCCTTGAGGTCTCGCAGGCAGCAAGGATGCCTTTCCAACCTGCTGTGGGTCGAGTaGAAGGAGGCAGTGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LEYREALRSRRQQGCLSNLLWVE*KEAVSC Trigger: GCAGCTCACTGCCTCCTTTCACTCGACCCACAGCAG...GTTGGAAAGGCATCCTTGCTGCCTGCGAGACCTCAAGGCTTCTCTGTATTCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR TCA 90 bp | CAGGGGCATCACCTTCCGTTCCTCCTCACGTTTCCAGAGCCCCGTGGCTCCATGGAACCTTCAACTTGGTaGGCCCAAGCCAATTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QGHHLPFLLTFPEPRGSMEPSTW*AQANFF Trigger: AAAGAAATTGGCTTGGGCTCACCAAGTTGAAGGTTC...CATGGAGCCACGGGGCTCTGGAAACGTGAGGAGGAACGGAAGGTGATGCCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR TCA 90 bp | TACAGAGAAGCCTTGAGGTCTCGCAGGCAGCAAGGATGCCTTTCCAACAGGCTTGACTCACTGCAGCGATaGGCCCTGACATGTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YREALRSRRQQGCLSNRLDSLQR*ALTCAP Trigger: AGGAGCACATGTCAGGGCTCATCGCTGCAGTGAGTC...AAGCCTGTTGGAAAGGCATCCTTGCTGCCTGCGAGACCTCAAGGCTTCTCTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR GCA 90 bp | CAGAGAAGCCTTGAGGTCTCGCAGGCAGCAAGGATGCCTTTCCAACAGGCTTCAGACGGAGGTGGCTCCTaGAAGGCACCCACAAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QRSLEVSQAARMPFQQASDGGGS*KAPTRK Trigger: TTTTCTTGTGGGTGCCTTGCAGGAGCCACCTCCGTC...TGAAGCCTGTTGGAAAGGCATCCTTGCTGCCTGCGAGACCTCAAGGCTTCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR TCA 90 bp | CAGAGAAGCCTTGAGGTCTCGCAGGCAGCAAGGATGCCTTTCCAACAGGCTTCAAGTGAAAGGAGGCAGTaGGCTGCTCTGGGTCTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QRSLEVSQAARMPFQQASSERRQ*AALGLE Trigger: TTCTAGACCCAGAGCAGCTCACTGCCTCCTTTCACT...TGAAGCCTGTTGGAAAGGCATCCTTGCTGCCTGCGAGACCTCAAGGCTTCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR GCA 90 bp | AGAGAAGCCTTGAGGTCTCGCAGGCAGCAAGGATGCCTTTCCAACAGGCTTCAGACTAGGGCCTGGAACTaGTTCCTCTGCTCCTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: REALRSRRQQGCLSNRLQTRAWN*FLCSFV Trigger: GACAAAGGAGCAGAGGAAGCAGTTCCAGGCCCTAGT...CTGAAGCCTGTTGGAAAGGCATCCTTGCTGCCTGCGAGACCTCAAGGCTTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR CCA 90 bp | CCGTTTCAGCCCCAGCCGTGTGACCTCCTGACCTTCTACAGTAAGATGCTTTATGAATTTGGACGGAGGTaGCTCCTGCAAGGCACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PFQPQPCDLLTFYSKMLYEFGRR*LLQGTH Trigger: GTGGGTGCCTTGCAGGAGCCACCTCCGTCCAAATTC...ATAAAGCATCTTACTGTAGAAGGTCAGGAGGTCACACGGCTGGGGCTGAAACGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR CCA 90 bp | GCCTACCCGTGGCTCCATGTGGTCCTATGCAGCCACTTGTCAGGAGGCTGCTGGCTTCGGTTGCGCAGTTaGACAAAATTTCAGACCATT | + |
|
Preference number: 4 (lower is better) Translates to: AYPWLHVVLCSHLSGGCWLRLRS*TKFQTI Trigger: AATGGTCTGAAATTTTGTCCAACTGCGCAACCGAAG...CCAGCAGCCTCCTGACAAGTGGCTGCATAGGACCACATGGAGCCACGGGTAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232345.2 |
||
| CDS-3UTR CCA 90 bp | CCCAGTGTTCCGTTTCAGCCCCAGCCGTGTGACCTCCTGACCTTCTACAGTAAGACTTGCTACGTGCAGTaGTTGCCACAGTGCAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PSVPFQPQPCDLLTFYSKTCYVQ*LPQCKL Trigger: CAACTTGCACTGTGGCAACCACTGCACGTAGCAAGT...CTTACTGTAGAAGGTCAGGAGGTCACACGGCTGGGGCTGAAACGGAACACTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR TCA 90 bp | CCCAGTGTTCCGTTTCAGCCCCAGCCGTGTGACCTCCTGACCTTCTACAGTAAGCAGCTCGAGGAGCTCTaGCAGATGATTACAGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: PSVPFQPQPCDLLTFYSKQLEEL*QMITDK Trigger: TTTGTCTGTAATCATCTGTCAGAGCTCCTCGAGCTG...CTTACTGTAGAAGGTCAGGAGGTCACACGGCTGGGGCTGAAACGGAACACTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR TCA 90 bp | GTTCCGTTTCAGCCCCAGCCGTGTGACCTCCTGACCTTCTACAGTAAGATGCTTAGTGAAAGGAGGCAGTaGGCTGCTCTGGGTCTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VPFQPQPCDLLTFYSKMLSERRQ*AALGLE Trigger: TTCTAGACCCAGAGCAGCTCACTGCCTCCTTTCACT...AAGCATCTTACTGTAGAAGGTCAGGAGGTCACACGGCTGGGGCTGAAACGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR TCA 90 bp | GATGCCTTTCCAACAGGCTTCAGGGGCATCACCTTCCGTTCCTCCTCACGTTTCAACCGAGGAGCCATGTaGGCATTGCAAGCAATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: DAFPTGFRGITFRSSSRFNRGAM*ALQAIL Trigger: CAAGATTGCTTGCAATGCTCACATGGCTCCTCGGTT...GAAACGTGAGGAGGAACGGAAGGTGATGCCCCTGAAGCCTGTTGGAAAGGCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR GCA 90 bp | GCTGGTCAGCTCACAACCACCTCAAACTCCAGCTCCAGGGGAGCTGGCACCTTGAACTTCCTCTTCGGTTaGGCAGTTGGACAAAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: AGQLTTTSNSSSRGAGTLNFLFG*AVGQNF Trigger: GAAATTTTGTCCAACTGCGCAACCGAAGAGGAAGTT...CAAGGTGCCAGCTCCCCTGGAGCTGGAGTTTGAGGTGGTTGTGAGCTGACCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232345.2 |
||
| CDS-3UTR GCA 90 bp | CAGGGGCATCACCTTCCGTTCCTCCTCACGTTTCCAGAGCCCCGTGGCTCCATGGAGATCCTGTTTAACTaGTGGATATACAGAAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QGHHLPFLLTFPEPRGSMEILFN*WIYRKS Trigger: GCTCTTTCTGTATATCCAGCAGTTAAACAGGATCTC...CATGGAGCCACGGGGCTCTGGAAACGTGAGGAGGAACGGAAGGTGATGCCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR GCA 90 bp | CCAGCAAAAGGTCTTGAATACAGAGAAGCCTTGAGGTCTCGCAGGCAGCAAGGAAAGGAGGCAGTGAGCTaGTCTGGGTCTAGAAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PAKGLEYREALRSRRQQGKEAVS*SGSRSS Trigger: GCTGCTTCTAGACCCAGAGCAGCTCACTGCCTCCTT...TCCTTGCTGCCTGCGAGACCTCAAGGCTTCTCTGTATTCAAGACCTTTTGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR GCA 90 bp | CAGAGAAGCCTTGAGGTCTCGCAGGCAGCAAGGATGCCTTTCCAACAGGCTTCATGGAACTGCTTCCTCTaGTCCTTTGTCAAACGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QRSLEVSQAARMPFQQASWNCFL*SFVKRA Trigger: GGCTCGTTTGACAAAGGAGCAGAGGAAGCAGTTCCA...TGAAGCCTGTTGGAAAGGCATCCTTGCTGCCTGCGAGACCTCAAGGCTTCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR GCA 90 bp | TTTCCAACAGGCTTCAGGGGCATCACCTTCCGTTCCTCCTCACGTTTCCAGAGCCACAAGAAAAGGTTCTaGCTTCACCCAGAGGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: FPTGFRGITFRSSSRFQSHKKRF*LHPEEN Trigger: GTTCTCCTCTGGGTGAAGGCAGAACCTTTTCTTGTG...GCTCTGGAAACGTGAGGAGGAACGGAAGGTGATGCCCCTGAAGCCTGTTGGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR GCA 90 bp | TTTCCAACAGGCTTCAGGGGCATCACCTTCCGTTCCTCCTCACGTTTCCAGAGCCAGTGGTTGCCACAGTaGAAGTTGATGAAGGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: FPTGFRGITFRSSSRFQSQWLPQ*KLMKGI Trigger: TATCCCCTTCATCAACTTGCACTGTGGCAACCACTG...GCTCTGGAAACGTGAGGAGGAACGGAAGGTGATGCCCCTGAAGCCTGTTGGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR GCA 90 bp | CAGAGAAGCCTTGAGGTCTCGCAGGCAGCAAGGATGCCTTTCCAACAGGCTTCACAGTGGTTGCCACAGTaGAAGTTGATGAAGGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: QRSLEVSQAARMPFQQASQWLPQ*KLMKGI Trigger: TATCCCCTTCATCAACTTGCACTGTGGCAACCACTG...TGAAGCCTGTTGGAAAGGCATCCTTGCTGCCTGCGAGACCTCAAGGCTTCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR GCA 90 bp | CCGTTTCAGCCCCAGCCGTGTGACCTCCTGACCTTCTACAGTAAGATGCTTTATAAGCCACTTGCTACGTaGAGTGGTTGCCACAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PFQPQPCDLLTFYSKMLYKPLAT*SGCHSA Trigger: TGCACTGTGGCAACCACTGCACGTAGCAAGTGGCTT...ATAAAGCATCTTACTGTAGAAGGTCAGGAGGTCACACGGCTGGGGCTGAAACGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR GCA 90 bp | CTTGTTTCTGAGACACAGGATCCTCACCATGTAGAGCAGGCTGGCCTGGAACTTACTAGGGCCTGGAACTaGTTCCTCTGCTCCTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LVSETQDPHHVEQAGLELTRAWN*FLCSFV Trigger: GACAAAGGAGCAGAGGAAGCAGTTCCAGGCCCTAGT...AAGTTCCAGGCCAGCCTGCTCTACATGGTGAGGATCCTGTGTCTCAGAAACAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGAAGCCTTGAGGTCTCGCAGGCAGCAAGGATGCCTTTCCAACAGGCTTCACTTGAGGCAAGCAGATaGACCAAACGGATTTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QRSLEVSQAARMPFQQASLEASR*TKRICG Trigger: ACCACAAATCCGTTTGGTCCATCTGCTTGCCTCAAG...TGAAGCCTGTTGGAAAGGCATCCTTGCTGCCTGCGAGACCTCAAGGCTTCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR CCA 90 bp | TACAGAGAAGCCTTGAGGTCTCGCAGGCAGCAAGGATGCCTTTCCAACAGGCTTGTGGTCCTCCAGCATTaGGTAATGGGTATGAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: YREALRSRRQQGCLSNRLVVLQH*VMGMKG Trigger: CCCTTTCATACCCATTACCCAATGCTGGAGGACCAC...AAGCCTGTTGGAAAGGCATCCTTGCTGCCTGCGAGACCTCAAGGCTTCTCTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR CCA 90 bp | CCGTTTCAGCCCCAGCCGTGTGACCTCCTGACCTTCTACAGTAAGATGCTTTATACTTGCTACGTGCAGTaGTTGCCACAGTGCAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PFQPQPCDLLTFYSKMLYTCYVQ*LPQCKL Trigger: CAACTTGCACTGTGGCAACCACTGCACGTAGCAAGT...ATAAAGCATCTTACTGTAGAAGGTCAGGAGGTCACACGGCTGGGGCTGAAACGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR CCA 90 bp | CCAGCAAAAGGTCTTGAATACAGAGAAGCCTTGAGGTCTCGCAGGCAGCAAGGAGTGGTCCTCCAGCATTaGGTAATGGGTATGAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PAKGLEYREALRSRRQQGVVLQH*VMGMKG Trigger: CCCTTTCATACCCATTACCCAATGCTGGAGGACCAC...TCCTTGCTGCCTGCGAGACCTCAAGGCTTCTCTGTATTCAAGACCTTTTGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR TCA 90 bp | CCGTTTCAGCCCCAGCCGTGTGACCTCCTGACCTTCTACAGTAAGATGCTTTATAGTCTTAGAGCTCTTTaGGAAGCCACTTGCTACGTG | + |
|
Preference number: 4 (lower is better) Translates to: PFQPQPCDLLTFYSKMLYSLRAL*EATCYV Trigger: CACGTAGCAAGTGGCTTCTCAAAGAGCTCTAAGACT...ATAAAGCATCTTACTGTAGAAGGTCAGGAGGTCACACGGCTGGGGCTGAAACGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR TCA 90 bp | CCCAGTGTTCCGTTTCAGCCCCAGCCGTGTGACCTCCTGACCTTCTACAGTAAGGAGAATAAGTGGACGTaGAGGTGTCATAATGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PSVPFQPQPCDLLTFYSKENKWT*RCHNVK Trigger: TTTCACATTATGACACCTTCACGTCCACTTATTCTC...CTTACTGTAGAAGGTCAGGAGGTCACACGGCTGGGGCTGAAACGGAACACTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR GCA 90 bp | GTGAGTACAGAACAGGAACCAGCAAAAGGTCTTGAATACAGAGAAGCCTTGAGGACCCCCAGGTATCTCTaGTGTGTCCCCTTCCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: VSTEQEPAKGLEYREALRTPRYL*CVPFHL Trigger: GAGATGGAAGGGGACACAGCAGAGATACCTGGGGGT...CCTCAAGGCTTCTCTGTATTCAAGACCTTTTGCTGGTTCCTGTTCTGTACTCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR CCA 90 bp | AGAGAAGCCTTGAGGTCTCGCAGGCAGCAAGGATGCCTTTCCAACAGGCTTCAGCTTCGGTTGCGCAGTTaGACAAAATTTCAGACCATT | + |
|
Preference number: 4 (lower is better) Translates to: REALRSRRQQGCLSNRLQLRLRS*TKFQTI Trigger: AATGGTCTGAAATTTTGTCCAACTGCGCAACCGAAG...CTGAAGCCTGTTGGAAAGGCATCCTTGCTGCCTGCGAGACCTCAAGGCTTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR CCA 90 bp | GATGCCTTTCCAACAGGCTTCAGGGGCATCACCTTCCGTTCCTCCTCACGTTTCCAATCTTGGCTCTTTTaGTCGAACCTTCAACTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: DAFPTGFRGITFRSSSRFQSWLF*SNLQLG Trigger: ACCAAGTTGAAGGTTCGACCAAAAGAGCCAAGATTG...GAAACGTGAGGAGGAACGGAAGGTGATGCCCCTGAAGCCTGTTGGAAAGGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR TCA 90 bp | GACCTCCTGACCTTCTACAGTAAGATGCTTTATGAAGTCAGAAGTTTGGCTAAACTGCTGTGGGTCGAGTaGAAGGAGGCAGTGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DLLTFYSKMLYEVRSLAKLLWVE*KEAVSC Trigger: GCAGCTCACTGCCTCCTTTCACTCGACCCACAGCAG...TTTAGCCAAACTTCTGACTTCATAAAGCATCTTACTGTAGAAGGTCAGGAGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR TCA 90 bp | AAGAGTCGTCTCCACAGGACCCAACACAAAGGTACTATTCCTGCATTTTTCAATTCAGGAAGCAGGAGCTaGTGCAGAGGCTTGGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KSRLHRTQHKGTIPAFFNSGSRS*CRGLVS Trigger: GCTCACCAAGCCTCTGCATCAGCTCCTGCTTCCTGA...ATTGAAAAATGCAGGAATAGTACCTTTGTGTTGGGTCCTGTGGAGACGACTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232345.2 |
||
| CDS-3UTR GCA 90 bp | GAGACCCCCAGGTATCTCTGCTGTGTCCCCTTCCATCTCAAAGGGAATAACAAACACAAGAAAAGGTTCTaGCTTCACCCAGAGGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ETPRYLCCVPFHLKGNNKHKKRF*LHPEEN Trigger: GTTCTCCTCTGGGTGAAGGCAGAACCTTTTCTTGTG...TTTGTTATTCCCTTTGAGATGGAAGGGGACACAGCAGAGATACCTGGGGGTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000232345.2 |
||
| CDS-3UTR CCA 90 bp | GAGACCCCCAGGTATCTCTGCTGTGTCCCCTTCCATCTCAAAGGGAATAACAAACTTGAGGCAAGCAGATaGACCAAACGGATTTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ETPRYLCCVPFHLKGNNKLEASR*TKRICG Trigger: ACCACAAATCCGTTTGGTCCATCTGCTTGCCTCAAG...TTTGTTATTCCCTTTGAGATGGAAGGGGACACAGCAGAGATACCTGGGGGTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000232345.2 |
||
| CDS-3UTR CCA 90 bp | TTTCCAACAGGCTTCAGGGGCATCACCTTCCGTTCCTCCTCACGTTTCCAGAGCATTTTTCAATTGTCATaGATCGTAAGGGGGAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FPTGFRGITFRSSSRFQSIFQLS*IVRGRA Trigger: TGCTCTCCCCCTTACGATCCATGACAATTGAAAAAT...GCTCTGGAAACGTGAGGAGGAACGGAAGGTGATGCCCCTGAAGCCTGTTGGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR GCA 90 bp | AACCCTTTCATCGTACAAATTAAAATGTGGAGTCAGCTGGGAAGCCTGTACTGGAAGCCACTTGCTACGTaGAGTGGTTGCCACAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NPFIVQIKMWSQLGSLYWKPLAT*SGCHSA Trigger: TGCACTGTGGCAACCACTGCACGTAGCAAGTGGCTT...CCAGTACAGGCTTCCCAGCTGACTCCACATTTTAATTTGTACGATGAAAGGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR GCA 90 bp | GTGAGTACAGAACAGGAACCAGCAAAAGGTCTTGAATACAGAGAAGCCTTGAGGAGAGGCCCTCAACCATaGTTCCAGCTTGTAGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VSTEQEPAKGLEYREALRRGPQP*FQLVER Trigger: TCTCTCTACAAGCTGGAAGCATGGTTGAGGGCCTCT...CCTCAAGGCTTCTCTGTATTCAAGACCTTTTGCTGGTTCCTGTTCTGTACTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR GCA 90 bp | CTTGAATACAGAGAAGCCTTGAGGTCTCGCAGGCAGCAAGGATGCCTTTCCAACTCTGCCAGATATGTATaGTCTCTTCTCTTTGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LEYREALRSRRQQGCLSNSARYV*SLLFEP Trigger: TGGCTCAAAGAGAAGAGAGCATACATATCTGGCAGA...GTTGGAAAGGCATCCTTGCTGCCTGCGAGACCTCAAGGCTTCTCTGTATTCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR CCA 90 bp | AGACAGGAAAGAATCATTAGAGATGAAGTACAGAACTTAATGCCTGAGCTGGAGGAATTTGGACGGAGGTaGCTCCTGCAAGGCACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RQERIIRDEVQNLMPELEEFGRR*LLQGTH Trigger: GTGGGTGCCTTGCAGGAGCCACCTCCGTCCAAATTC...CTCCAGCTCAGGCATTAAGTTCTGTACTTCATCTCTAATGATTCTTTCCTGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232345.2 |
||
| CDS-3UTR TCA 90 bp | CCACAGGACCCAACACAAAGGTACTATTCCTGCATTTTTCAATTGTCATGGATCAGTGAAAGGAGGCAGTaGGCTGCTCTGGGTCTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PQDPTQRYYSCIFQLSWISERRQ*AALGLE Trigger: TTCTAGACCCAGAGCAGCTCACTGCCTCCTTTCACT...GATCCATGACAATTGAAAAATGCAGGAATAGTACCTTTGTGTTGGGTCCTGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232345.2 |
||
| CDS-3UTR TCA 90 bp | CCGTTTCAGCCCCAGCCGTGTGACCTCCTGACCTTCTACAGTAAGATGCTTTATGAGAATAAGTGGACGTaGAGGTGTCATAATGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PFQPQPCDLLTFYSKMLYENKWT*RCHNVK Trigger: TTTCACATTATGACACCTTCACGTCCACTTATTCTC...ATAAAGCATCTTACTGTAGAAGGTCAGGAGGTCACACGGCTGGGGCTGAAACGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR GCA 90 bp | GACCTCCTGACCTTCTACAGTAAGATGCTTTATGAAGTCAGAAGTTTGGCTAAAAAGGAGGCAGTGAGCTaGTCTGGGTCTAGAAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DLLTFYSKMLYEVRSLAKKEAVS*SGSRSS Trigger: GCTGCTTCTAGACCCAGAGCAGCTCACTGCCTCCTT...TTTAGCCAAACTTCTGACTTCATAAAGCATCTTACTGTAGAAGGTCAGGAGGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR GCA 90 bp | TCGAACCTTCAAATTTTCCACATTGCTGTTAATCACCAAAGGATGTCAGGACTGAAGGAGGCAGTGAGCTaGTCTGGGTCTAGAAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SNLQIFHIAVNHQRMSGLKEAVS*SGSRSS Trigger: GCTGCTTCTAGACCCAGAGCAGCTCACTGCCTCCTT...CAGTCCTGACATCCTTTGGTGATTAACAGCAATGTGGAAAATTTGAAGGTTCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232345.2 |
||
| CDS-3UTR GCA 90 bp | TTTCAGCCCCAGCCGTGTGACCTCCTGACCTTCTACAGTAAGATGCTTTATGAAGAGCCATGTGAGCATTaGAAGCAATCTTGGCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FQPQPCDLLTFYSKMLYEEPCEH*KQSWLF Trigger: AAAGAGCCAAGATTGCTTGCAATGCTCACATGGCTC...TTCATAAAGCATCTTACTGTAGAAGGTCAGGAGGTCACACGGCTGGGGCTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR CCA 90 bp | CTTGTTTCTGAGACACAGGATCCTCACCATGTAGAGCAGGCTGGCCTGGAACTTATCCTGTTTAACTGCTaGATATACAGAAAGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LVSETQDPHHVEQAGLELILFNC*IYRKSR Trigger: CCTGCTCTTTCTGTATATCCAGCAGTTAAACAGGAT...AAGTTCCAGGCCAGCCTGCTCTACATGGTGAGGATCCTGTGTCTCAGAAACAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR TCA 90 bp | TTTCAGCCCCAGCCGTGTGACCTCCTGACCTTCTACAGTAAGATGCTTTATGAAGAAGGTGTCATAATGTaGAAGGTGCAGCTTGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: FQPQPCDLLTFYSKMLYEEGVIM*KVQLVV Trigger: TACAACAAGCTGCACCTTTCACATTATGACACCTTC...TTCATAAAGCATCTTACTGTAGAAGGTCAGGAGGTCACACGGCTGGGGCTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR GCA 90 bp | AACCCTTTCATCGTACAAATTAAAATGTGGAGTCAGCTGGGAAGCCTGTACTGGCACAAGAAAAGGTTCTaGCTTCACCCAGAGGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: NPFIVQIKMWSQLGSLYWHKKRF*LHPEEN Trigger: GTTCTCCTCTGGGTGAAGGCAGAACCTTTTCTTGTG...CCAGTACAGGCTTCCCAGCTGACTCCACATTTTAATTTGTACGATGAAAGGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR GCA 90 bp | GAGACCCCCAGGTATCTCTGCTGTGTCCCCTTCCATCTCAAAGGGAATAACAAAGAGATCCTGTTTAACTaGTGGATATACAGAAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ETPRYLCCVPFHLKGNNKEILFN*WIYRKS Trigger: GCTCTTTCTGTATATCCAGCAGTTAAACAGGATCTC...TTTGTTATTCCCTTTGAGATGGAAGGGGACACAGCAGAGATACCTGGGGGTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000232345.2 |
||
| CDS-3UTR TCA 90 bp | GTGAGTACAGAACAGGAACCAGCAAAAGGTCTTGAATACAGAGAAGCCTTGAGGGAAGGTGTCATAATGTaGAAGGTGCAGCTTGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: VSTEQEPAKGLEYREALREGVIM*KVQLVV Trigger: TACAACAAGCTGCACCTTTCACATTATGACACCTTC...CCTCAAGGCTTCTCTGTATTCAAGACCTTTTGCTGGTTCCTGTTCTGTACTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR GCA 90 bp | AAGAGAGTAGCAAGTTACAAAGAACCACACAACTGTTCTTTCTTTTCCTTCCTTGACGGAGGTGGCTCCTaGAAGGCACCCACAAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KRVASYKEPHNCSFFSFLDGGGS*KAPTRK Trigger: TTTTCTTGTGGGTGCCTTGCAGGAGCCACCTCCGTC...AAGGAAGGAAAAGAAAGAACAGTTGTGTGGTTCTTTGTAACTTGCTACTCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR GCA 90 bp | GTGAGTACAGAACAGGAACCAGCAAAAGGTCTTGAATACAGAGAAGCCTTGAGGAACTTCCTCTTCGGTTaGGCAGTTGGACAAAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSTEQEPAKGLEYREALRNFLFG*AVGQNF Trigger: GAAATTTTGTCCAACTGCGCAACCGAAGAGGAAGTT...CCTCAAGGCTTCTCTGTATTCAAGACCTTTTGCTGGTTCCTGTTCTGTACTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR GCA 90 bp | GACCTCCTGACCTTCTACAGTAAGATGCTTTATGAAGTCAGAAGTTTGGCTAAAAGAGGCCCTCAACCATaGTTCCAGCTTGTAGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: DLLTFYSKMLYEVRSLAKRGPQP*FQLVER Trigger: TCTCTCTACAAGCTGGAAGCATGGTTGAGGGCCTCT...TTTAGCCAAACTTCTGACTTCATAAAGCATCTTACTGTAGAAGGTCAGGAGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR TCA 90 bp | GACCTCCTGACCTTCTACAGTAAGATGCTTTATGAAGTCAGAAGTTTGGCTAAAAGTCTTAGAGCTCTTTaGGAAGCCACTTGCTACGTG | + |
|
Preference number: 4 (lower is better) Translates to: DLLTFYSKMLYEVRSLAKSLRAL*EATCYV Trigger: CACGTAGCAAGTGGCTTCTCAAAGAGCTCTAAGACT...TTTAGCCAAACTTCTGACTTCATAAAGCATCTTACTGTAGAAGGTCAGGAGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR TCA 90 bp | TCGAACCTTCAAATTTTCCACATTGCTGTTAATCACCAAAGGATGTCAGGACTGAGTCTTAGAGCTCTTTaGGAAGCCACTTGCTACGTG | + |
|
Preference number: 4 (lower is better) Translates to: SNLQIFHIAVNHQRMSGLSLRAL*EATCYV Trigger: CACGTAGCAAGTGGCTTCTCAAAGAGCTCTAAGACT...CAGTCCTGACATCCTTTGGTGATTAACAGCAATGTGGAAAATTTGAAGGTTCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232345.2 |
||
| CDS-3UTR GCA 90 bp | TCGAACCTTCAAATTTTCCACATTGCTGTTAATCACCAAAGGATGTCAGGACTGCAGTGGTTGCCACAGTaGAAGTTGATGAAGGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: SNLQIFHIAVNHQRMSGLQWLPQ*KLMKGI Trigger: TATCCCCTTCATCAACTTGCACTGTGGCAACCACTG...CAGTCCTGACATCCTTTGGTGATTAACAGCAATGTGGAAAATTTGAAGGTTCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232345.2 |
||
| CDS-3UTR GCA 90 bp | AACTATCTCTGCCATATTTATGCACCAACTGACCATTCTGTCACTCTTTTTAAAACCCCCAGGTATCTCTaGTGTGTCCCCTTCCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: NYLCHIYAPTDHSVTLFKTPRYL*CVPFHL Trigger: GAGATGGAAGGGGACACAGCAGAGATACCTGGGGGT...TTTAAAAAGAGTGACAGAATGGTCAGTTGGTGCATAAATATGGCAGAGATAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| 3UTR CAA 72 bp | CTTGGCTCTTTTGGTCGAACCTTCAAATTTTCCACATaGCTGTTAATCACCAAAGGATGTCAGGACTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LGSFGRTFKFST*LLITKGCQDWN Trigger: GTTCCAGTCCTGACATCCTTTGGTGATTAACAGCAATGTGGAAAATTTGAAGGTTCGACCAAAAGAGCCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232345.2 |
||
| CDS-3UTR CCA 90 bp | CTCAAAGGGAATAACAAATATGTAGAACTCAGAAGGAGGCAAGAGCCGGAAGAGATCCTGTTTAACTGCTaGATATACAGAAAGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKGNNKYVELRRRQEPEEILFNC*IYRKSR Trigger: CCTGCTCTTTCTGTATATCCAGCAGTTAAACAGGAT...CTCTTCCGGCTCTTGCCTCCTTCTGAGTTCTACATATTTGTTATTCCCTTTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232345.2 |
||
| CDS-3UTR CCA 90 bp | AACCCTTTCATCGTACAAATTAAAATGTGGAGTCAGCTGGGAAGCCTGTACTGGATTTTTCAATTGTCATaGATCGTAAGGGGGAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NPFIVQIKMWSQLGSLYWIFQLS*IVRGRA Trigger: TGCTCTCCCCCTTACGATCCATGACAATTGAAAAAT...CCAGTACAGGCTTCCCAGCTGACTCCACATTTTAATTTGTACGATGAAAGGGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR TCA 90 bp | TGCCATATTTATGCACCAACTGACCATTCTGTCACTCTTTTTAAAAAGAGAGTAAACCGAGGAGCCATGTaGGCATTGCAAGCAATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CHIYAPTDHSVTLFKKRVNRGAM*ALQAIL Trigger: CAAGATTGCTTGCAATGCTCACATGGCTCCTCGGTT...TACTCTCTTTTTAAAAAGAGTGACAGAATGGTCAGTTGGTGCATAAATATGGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR GCA 90 bp | GACCTCCTGACCTTCTACAGTAAGATGCTTTATGAAGTCAGAAGTTTGGCTAAAAACTTCCTCTTCGGTTaGGCAGTTGGACAAAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: DLLTFYSKMLYEVRSLAKNFLFG*AVGQNF Trigger: GAAATTTTGTCCAACTGCGCAACCGAAGAGGAAGTT...TTTAGCCAAACTTCTGACTTCATAAAGCATCTTACTGTAGAAGGTCAGGAGGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR CCA 90 bp | AAGAGAGTAGCAAGTTACAAAGAACCACACAACTGTTCTTTCTTTTCCTTCCTTCTTGAGGCAAGCAGATaGACCAAACGGATTTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KRVASYKEPHNCSFFSFLLEASR*TKRICG Trigger: ACCACAAATCCGTTTGGTCCATCTGCTTGCCTCAAG...AAGGAAGGAAAAGAAAGAACAGTTGTGTGGTTCTTTGTAACTTGCTACTCTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR GCA 90 bp | GACCTCCTGACCTTCTACAGTAAGATGCTTTATGAAGTCAGAAGTTTGGCTAAAGAGATCCTGTTTAACTaGTGGATATACAGAAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: DLLTFYSKMLYEVRSLAKEILFN*WIYRKS Trigger: GCTCTTTCTGTATATCCAGCAGTTAAACAGGATCTC...TTTAGCCAAACTTCTGACTTCATAAAGCATCTTACTGTAGAAGGTCAGGAGGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR TCA 90 bp | TGCCATATTTATGCACCAACTGACCATTCTGTCACTCTTTTTAAAAAGAGAGTATTCCAATTCTTATTGTaGCAACTGGGCCTTTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CHIYAPTDHSVTLFKKRVFQFLL*QLGLSA Trigger: GGCTGAAAGGCCCAGTTGTCACAATAAGAATTGGAA...TACTCTCTTTTTAAAAAGAGTGACAGAATGGTCAGTTGGTGCATAAATATGGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR TCA 90 bp | AACTATCTCTGCCATATTTATGCACCAACTGACCATTCTGTCACTCTTTTTAAATTCCAATTCTTATTGTaGCAACTGGGCCTTTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NYLCHIYAPTDHSVTLFKFQFLL*QLGLSA Trigger: GGCTGAAAGGCCCAGTTGTCACAATAAGAATTGGAA...TTTAAAAAGAGTGACAGAATGGTCAGTTGGTGCATAAATATGGCAGAGATAGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR TCA 90 bp | AAAACTATCTCTGCCATATTTATGCACCAACTGACCATTCTGTCACTCTTTTTAGAACCTTCAACTTGGTaGGCCCAAGCCAATTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KTISAIFMHQLTILSLFLEPSTW*AQANFF Trigger: AAAGAAATTGGCTTGGGCTCACCAAGTTGAAGGTTC...TAAAAAGAGTGACAGAATGGTCAGTTGGTGCATAAATATGGCAGAGATAGTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR CCA 90 bp | AAGAGAGTAGCAAGTTACAAAGAACCACACAACTGTTCTTTCTTTTCCTTCCTTCTTCGGTTGCGCAGTTaGACAAAATTTCAGACCATT | + |
|
Preference number: 4 (lower is better) Translates to: KRVASYKEPHNCSFFSFLLRLRS*TKFQTI Trigger: AATGGTCTGAAATTTTGTCCAACTGCGCAACCGAAG...AAGGAAGGAAAAGAAAGAACAGTTGTGTGGTTCTTTGTAACTTGCTACTCTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR GCA 90 bp | TATCTCTGCCATATTTATGCACCAACTGACCATTCTGTCACTCTTTTTAAAAAGTCTGCCAGATATGTATaGTCTCTTCTCTTTGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YLCHIYAPTDHSVTLFKKSARYV*SLLFEP Trigger: TGGCTCAAAGAGAAGAGAGCATACATATCTGGCAGA...CTTTTTAAAAAGAGTGACAGAATGGTCAGTTGGTGCATAAATATGGCAGAGATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR CCA 90 bp | ATCTCTGCCATATTTATGCACCAACTGACCATTCTGTCACTCTTTTTAAAAAGACAATCTTGGCTCTTTTaGTCGAACCTTCAACTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ISAIFMHQLTILSLFLKRQSWLF*SNLQLG Trigger: ACCAAGTTGAAGGTTCGACCAAAAGAGCCAAGATTG...TCTTTTTAAAAAGAGTGACAGAATGGTCAGTTGGTGCATAAATATGGCAGAGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR CCA 90 bp | ATCTCTGCCATATTTATGCACCAACTGACCATTCTGTCACTCTTTTTAAAAAGAATCCTGTTTAACTGCTaGATATACAGAAAGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ISAIFMHQLTILSLFLKRILFNC*IYRKSR Trigger: CCTGCTCTTTCTGTATATCCAGCAGTTAAACAGGAT...TCTTTTTAAAAAGAGTGACAGAATGGTCAGTTGGTGCATAAATATGGCAGAGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS TCA 90 bp | AGCGCCGTGACAGCATCCCGGGAGAGCAGACTGCTGTGGGTCGAGTaGAAGGAGGCAGTGAGCTGCTCTGGGTCTAGAAGCAGCTCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SAVTASRESRLLWVE*KEAVSCSGSRSSSR Trigger: CCTCGAGCTGCTTCTAGACCCAGAGCAGCTCACTGCCTCCTTTCACTCGACCCACAGCAGTCTGCTCTCCCGGGATGCTGTCACGGCGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 ENSMUST00000232251.2 ENSMUST00000232345.2 |
||
| CDS TCA 90 bp | CATCCCGGGAGAGCAGACTGCTGTGGGTCGAGTGAAAGGAGGCAGTaGGCTGCTCTGGGTCTAGAAGCAGCTCGAGGAGCTCTGACAGAT | + |
|
Preference number: 5 (lower is better) Translates to: HPGRADCCGSSERRQ*AALGLEAARGALTD Trigger: ATCTGTCAGAGCTCCTCGAGCTGCTTCTAGACCCAGAGCAGCTCACTGCCTCCTTTCACTCGACCCACAGCAGTCTGCTCTCCCGGGATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 ENSMUST00000232251.2 ENSMUST00000232345.2 |
||
| CDS-3UTR CAA 90 bp | CAGGGGCATCACCTTCCGTTCCTCCTCACGTTTCCAGAGCCCCGTGGCTCCATGGGTCGAACCTTCAACTaGGTGAGCCCAAGCCAATTT | + |
|
Preference number: 5 (lower is better) Translates to: QGHHLPFLLTFPEPRGSMGRTFN*VSPSQF Trigger: AAATTGGCTTGGGCTCACCAAGTTGAAGGTTCGACC...CATGGAGCCACGGGGCTCTGGAAACGTGAGGAGGAACGGAAGGTGATGCCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR CAA 90 bp | GCCTACCCGTGGCTCCATGTGGTCCTATGCAGCCACTTGTCAGGAGGCTGCTGGCAGAAAGAGCAGGAATaGCAGCGTGTCCACATAAAG | + |
|
Preference number: 5 (lower is better) Translates to: AYPWLHVVLCSHLSGGCWQKEQE*QRVHIK Trigger: CTTTATGTGGACACGCTGCAATTCCTGCTCTTTCTG...CCAGCAGCCTCCTGACAAGTGGCTGCATAGGACCACATGGAGCCACGGGTAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232345.2 |
||
| CDS-3UTR CAA 90 bp | TCAGGGGCATCACCTTCCGTTCCTCCTCACGTTTCCAGAGCCCCGTGGCTCCATTGTGGTCCTCCAGCATaGGGTAATGGGTATGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SGASPSVPPHVSRAPWLHCGPPA*GNGYER Trigger: CCTTTCATACCCATTACCCAATGCTGGAGGACCACA...ATGGAGCCACGGGGCTCTGGAAACGTGAGGAGGAACGGAAGGTGATGCCCCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR CAA 90 bp | CCCAGTGTTCCGTTTCAGCCCCAGCCGTGTGACCTCCTGACCTTCTACAGTAAGGCATTGCAAGCAATCTaGGCTCTTTTGGTCGAACCT | + |
|
Preference number: 5 (lower is better) Translates to: PSVPFQPQPCDLLTFYSKALQAI*ALLVEP Trigger: AGGTTCGACCAAAAGAGCCAAGATTGCTTGCAATGC...CTTACTGTAGAAGGTCAGGAGGTCACACGGCTGGGGCTGAAACGGAACACTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR CAA 90 bp | TTTCCAACAGGCTTCAGGGGCATCACCTTCCGTTCCTCCTCACGTTTCCAGAGCCAGAAAGAGCAGGAATaGCAGCGTGTCCACATAAAG | + |
|
Preference number: 5 (lower is better) Translates to: FPTGFRGITFRSSSRFQSQKEQE*QRVHIK Trigger: CTTTATGTGGACACGCTGCAATTCCTGCTCTTTCTG...GCTCTGGAAACGTGAGGAGGAACGGAAGGTGATGCCCCTGAAGCCTGTTGGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR CAA 90 bp | TACAGAGAAGCCTTGAGGTCTCGCAGGCAGCAAGGATGCCTTTCCAACAGGCTTATGGACCAAACGGATTaGTGGTCAAAGAGGCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: YREALRSRRQQGCLSNRLMDQTD*WSKRPS Trigger: TGAGGGCCTCTTTGACCACAAATCCGTTTGGTCCAT...AAGCCTGTTGGAAAGGCATCCTTGCTGCCTGCGAGACCTCAAGGCTTCTCTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR CAA 90 bp | GCAGTTAAGGGCACTTGTTGCTCTTGTAGAAGACTCAGGTCGGATTCCAGGCACATGGACCAAACGGATTaGTGGTCAAAGAGGCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: AVKGTCCSCRRLRSDSRHMDQTD*WSKRPS Trigger: TGAGGGCCTCTTTGACCACAAATCCGTTTGGTCCAT...GTGCCTGGAATCCGACCTGAGTCTTCTACAAGAGCAACAAGTGCCCTTAACTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232345.2 |
||
| CDS-3UTR CAA 90 bp | AAGAGAGTAGCAAGTTACAAAGAACCACACAACTGTTCTTTCTTTTCCTTCCTTATGGACCAAACGGATTaGTGGTCAAAGAGGCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: KRVASYKEPHNCSFFSFLMDQTD*WSKRPS Trigger: TGAGGGCCTCTTTGACCACAAATCCGTTTGGTCCAT...AAGGAAGGAAAAGAAAGAACAGTTGTGTGGTTCTTTGTAACTTGCTACTCTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR CAA 90 bp | AAGAGAGTAGCAAGTTACAAAGAACCACACAACTGTTCTTTCTTTTCCTTCCTTGGTCGAACCTTCAACTaGGTGAGCCCAAGCCAATTT | + |
|
Preference number: 5 (lower is better) Translates to: KRVASYKEPHNCSFFSFLGRTFN*VSPSQF Trigger: AAATTGGCTTGGGCTCACCAAGTTGAAGGTTCGACC...AAGGAAGGAAAAGAAAGAACAGTTGTGTGGTTCTTTGTAACTTGCTACTCTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS-3UTR CAA 90 bp | TATCTCTGCCATATTTATGCACCAACTGACCATTCTGTCACTCTTTTTAAAAAGGCATTGCAAGCAATCTaGGCTCTTTTGGTCGAACCT | + |
|
Preference number: 5 (lower is better) Translates to: YLCHIYAPTDHSVTLFKKALQAI*ALLVEP Trigger: AGGTTCGACCAAAAGAGCCAAGATTGCTTGCAATGC...CTTTTTAAAAAGAGTGACAGAATGGTCAGTTGGTGCATAAATATGGCAGAGATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 |
||
| CDS GCA 72 bp | CCAATCAATGATGTCCGCAGAGAGATCCTGTTTAACTaGTGGATATACAGAAAGAGCAGGAATTGCAGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: PINDVRREILFN*WIYRKSRNCSV Trigger: CACGCTGCAATTCCTGCTCTTTCTGTATATCCAGCAGTTAAACAGGATCTCTCTGCGGACATCATTGATTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004576.8 ENSMUST00000232075.2 ENSMUST00000232251.2 ENSMUST00000232345.2 |
||