RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TBCB (Mus musculus)

Ensembl gene IDs: ENSMUSG00000006095

Ensembl transcript IDs: ENSMUST00000006254.6

Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR GCA 90 bp ATTCTGTTTAATTTAATGCACAAATCTCAGAGGAAAAGGGCCACAGGCATTCAGACGCTGGGCAGCCTCTaGCTCTTGCTGGGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: ILFNLMHKSQRKRATGIQTLGSL*LLLGPE
Trigger: CTCCGGGCCCAGCAAGAGGCAGAGGCTGCCCAGCGT...CTGAATGCCTGTGGCCCTTTTCCTCTGAGATTTGTGCATTAAATTAAACAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006254.6
CDS-3UTR CCA 90 bp ATTCTGTTTAATTTAATGCACAAATCTCAGAGGAAAAGGGCCACAGGCATTCAGCCCCTGCGAAGGGAGTaGTCGGGTGCCCGCACCTCA +
Preference number: 4 (lower is better)
Translates to: ILFNLMHKSQRKRATGIQPLRRE*SGARTS
Trigger: TGAGGTGCGGGCACCCGACCACTCCCTTCGCAGGGG...CTGAATGCCTGTGGCCCTTTTCCTCTGAGATTTGTGCATTAAATTAAACAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006254.6
CDS-3UTR TCA 90 bp ATTCTGTTTAATTTAATGCACAAATCTCAGAGGAAAAGGGCCACAGGCATTCAGGGGCCTTCTCCTCACTaGGACGCTGGGCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: ILFNLMHKSQRKRATGIQGPSPH*DAGQPL
Trigger: CAGAGGCTGCCCAGCGTCTCAGTGAGGAGAAGGCCC...CTGAATGCCTGTGGCCCTTTTCCTCTGAGATTTGTGCATTAAATTAAACAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006254.6
CDS-3UTR CCA 90 bp ATTCTGTTTAATTTAATGCACAAATCTCAGAGGAAAAGGGCCACAGGCATTCAGTCCTCACTGAGACGCTaGGCAGCCTCTGCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: ILFNLMHKSQRKRATGIQSSLRR*AASASC
Trigger: GCAAGAGGCAGAGGCTGCCCAGCGTCTCAGTGAGGA...CTGAATGCCTGTGGCCCTTTTCCTCTGAGATTTGTGCATTAAATTAAACAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006254.6
CDS-3UTR CCA 90 bp ATTCTGTTTAATTTAATGCACAAATCTCAGAGGAAAAGGGCCACAGGCATTCAGGGCTCCCCACAGAGATaGCACTGGCTTGGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: ILFNLMHKSQRKRATGIQGSPQR*HWLGPS
Trigger: AGAAGGCCCAAGCCAGTGCCATCTCTGTGGGGAGCC...CTGAATGCCTGTGGCCCTTTTCCTCTGAGATTTGTGCATTAAATTAAACAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006254.6
CDS-3UTR GCA 90 bp ATTCTGTTTAATTTAATGCACAAATCTCAGAGGAAAAGGGCCACAGGCATTCAGATAGCTCCAGTTCCATaGAGGAAGCAGGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: ILFNLMHKSQRKRATGIQIAPVP*RKQGCP
Trigger: TGGGCAGCCCTGCTTCCTGCATGGAACTGGAGCTAT...CTGAATGCCTGTGGCCCTTTTCCTCTGAGATTTGTGCATTAAATTAAACAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006254.6
CDS-3UTR CCA 90 bp ATTCTGTTTAATTTAATGCACAAATCTCAGAGGAAAAGGGCCACAGGCATTCAGGAGATGGCACTGGCTTaGGCCTTCTCCTCACTGAGA +
Preference number: 4 (lower is better)
Translates to: ILFNLMHKSQRKRATGIQEMALA*AFSSLR
Trigger: TCTCAGTGAGGAGAAGGCCCAAGCCAGTGCCATCTC...CTGAATGCCTGTGGCCCTTTTCCTCTGAGATTTGTGCATTAAATTAAACAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006254.6
CDS-3UTR CCA 90 bp ATTCTGTTTAATTTAATGCACAAATCTCAGAGGAAAAGGGCCACAGGCATTCAGCCCGTAGTCCTCCTCTaGGAAATCTCCTACGGTGAC +
Preference number: 4 (lower is better)
Translates to: ILFNLMHKSQRKRATGIQPVVLL*EISYGD
Trigger: GTCACCGTAGGAGATTTCCCAGAGGAGGACTACGGG...CTGAATGCCTGTGGCCCTTTTCCTCTGAGATTTGTGCATTAAATTAAACAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006254.6
CDS-3UTR GCA 90 bp ATTCTGTTTAATTTAATGCACAAATCTCAGAGGAAAAGGGCCACAGGCATTCAGATAGGAGCCCAGCAGTaGATCCTCCTGATCCAACTT +
Preference number: 4 (lower is better)
Translates to: ILFNLMHKSQRKRATGIQIGAQQ*ILLIQL
Trigger: AAGTTGGATCAGGAGGATGCACTGCTGGGCTCCTAT...CTGAATGCCTGTGGCCCTTTTCCTCTGAGATTTGTGCATTAAATTAAACAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006254.6
CDS-3UTR GCA 90 bp ATTCTGTTTAATTTAATGCACAAATCTCAGAGGAAAAGGGCCACAGGCATTCAGCCTCCTGATCCAACTTaGTGTAGAACTTGTCGTCTG +
Preference number: 4 (lower is better)
Translates to: ILFNLMHKSQRKRATGIQPPDPT*CRTCRL
Trigger: CAGACGACAAGTTCTACAGCAAGTTGGATCAGGAGG...CTGAATGCCTGTGGCCCTTTTCCTCTGAGATTTGTGCATTAAATTAAACAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006254.6
CDS-3UTR CCA 90 bp ATTCTGTTTAATTTAATGCACAAATCTCAGAGGAAAAGGGCCACAGGCATTCAGCAAAGGCACCATACTTaGCCTGGCATTCAAAGTAGC +
Preference number: 4 (lower is better)
Translates to: ILFNLMHKSQRKRATGIQQRHHT*PGIQSS
Trigger: GCTACTTTGAATGCCAGGCCAAGTATGGTGCCTTTG...CTGAATGCCTGTGGCCCTTTTCCTCTGAGATTTGTGCATTAAATTAAACAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006254.6
CDS-3UTR GCA 90 bp ATTCTGTTTAATTTAATGCACAAATCTCAGAGGAAAAGGGCCACAGGCATTCAGTTTACACTTGAACTCTaGGATGGTGAGGCTACGACT +
Preference number: 4 (lower is better)
Translates to: ILFNLMHKSQRKRATGIQFTLEL*DGEATT
Trigger: AGTCGTAGCCTCACCATCGCAGAGTTCAAGTGTAAA...CTGAATGCCTGTGGCCCTTTTCCTCTGAGATTTGTGCATTAAATTAAACAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006254.6
CDS TCA 90 bp AACGGCTCCCCACAGAGATGGCACTGGCTTGGGCCTTCTCCTCACTaGGACGCTGGGCAGCCTCTGCCTCTTGCTGGGCCCGGAGTTCTT +
Preference number: 5 (lower is better)
Translates to: NGSPQRWHWLGPSPH*DAGQPLPLAGPGVL
Trigger: AAGAACTCCGGGCCCAGCAAGAGGCAGAGGCTGCCCAGCGTCTCAGTGAGGAGAAGGCCCAAGCCAGTGCCATCTCTGTGGGGAGCCGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006254.6
CDS GCA 90 bp GAGTCCTACATACATGACAGTGCCCCTGCGAAGGGAGTGGTCGGGTaGCCGCACCTCACAACGGCTCCCCACAGAGATGGCACTGGCTTG +
Preference number: 5 (lower is better)
Translates to: ESYIHDSAPAKGVVG*PHLTTAPHRDGTGL
Trigger: CAAGCCAGTGCCATCTCTGTGGGGAGCCGTTGTGAGGTGCGGGCACCCGACCACTCCCTTCGCAGGGGCACTGTCATGTATGTAGGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006254.6
CDS CCA 90 bp TGGGCCTTCTCCTCACTGAGACGCTGGGCAGCCTCTGCCTCTTGCTaGGCCCGGAGTTCTTCATTGTACGGGCCTAGCTTGCTGCGTTTC +
Preference number: 5 (lower is better)
Translates to: WAFSSLRRWAASASC*ARSSSLYGPSLLRF
Trigger: GAAACGCAGCAAGCTAGGCCCGTACAATGAAGAACTCCGGGCCCAGCAAGAGGCAGAGGCTGCCCAGCGTCTCAGTGAGGAGAAGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006254.6
CDS CCA 90 bp CCCACAGAGATGGCACTGGCTTGGGCCTTCTCCTCACTGAGACGCTaGGCAGCCTCTGCCTCTTGCTGGGCCCGGAGTTCTTCATTGTAC +
Preference number: 5 (lower is better)
Translates to: PTEMALAWAFSSLRR*AASASCWARSSSLY
Trigger: GTACAATGAAGAACTCCGGGCCCAGCAAGAGGCAGAGGCTGCCCAGCGTCTCAGTGAGGAGAAGGCCCAAGCCAGTGCCATCTCTGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006254.6
CDS CCA 90 bp AAATCTGTGAGTCCTACATACATGACAGTGCCCCTGCGAAGGGAGTaGTCGGGTGCCCGCACCTCACAACGGCTCCCCACAGAGATGGCA +
Preference number: 5 (lower is better)
Translates to: KSVSPTYMTVPLRRE*SGARTSQRLPTEMA
Trigger: TGCCATCTCTGTGGGGAGCCGTTGTGAGGTGCGGGCACCCGACCACTCCCTTCGCAGGGGCACTGTCATGTATGTAGGACTCACAGATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006254.6
CDS GCA 90 bp GACATGGATGCGACAGCCGTCATCCACAGGATAGGAGCCCAGCAGTaGATCCTCCTGATCCAACTTGCTGTAGAACTTGTCGTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: DMDATAVIHRIGAQQ*ILLIQLAVELVVCS
Trigger: GGAGCAGACGACAAGTTCTACAGCAAGTTGGATCAGGAGGATGCACTGCTGGGCTCCTATCCTGTGGATGACGGCTGTCGCATCCATGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006254.6
CDS TCA 90 bp GGGCCCGGAGTTCTTCATTGTACGGGCCTAGCTTGCTGCGTTTCATaGAGGATCGAACTGTGTTCTGCCTCCGTTCGTAAGCTTCTGGTG +
Preference number: 5 (lower is better)
Translates to: GPGVLHCTGLACCVS*RIELCSASVRKLLV
Trigger: CACCAGAAGCTTACGAACGGAGGCAGAACACAGTTCGATCCTTCATGAAACGCAGCAAGCTAGGCCCGTACAATGAAGAACTCCGGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006254.6
CDS CCA 90 bp GCCTCCGTTCGTAAGCTTCTGGTGAGATCTCGTATTTCTCCACTTTaGACACATCCTCATACTCTCCGAGCCGGACGCCACTGTGGTCAA +
Preference number: 5 (lower is better)
Translates to: ASVRKLLVRSRISPL*THPHTLRAGRHCGQ
Trigger: TTGACCACAGTGGCGTCCGGCTCGGAGAGTATGAGGATGTGTCCAAAGTGGAGAAATACGAGATCTCACCAGAAGCTTACGAACGGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006254.6
CDS TCA 90 bp ACATCTCGTCCAACCCGTAGTCCTCCTCTGGGAAATCTCCTACGGTaGCAGCTGATGGCTTTACAAAGGCACCATACTTGGCCTGGCATT +
Preference number: 5 (lower is better)
Translates to: TSRPTRSPPLGNLLR*QLMALQRHHTWPGI
Trigger: AATGCCAGGCCAAGTATGGTGCCTTTGTAAAGCCATCAGCTGTCACCGTAGGAGATTTCCCAGAGGAGGACTACGGGTTGGACGAGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006254.6
CDS-3UTR CAA 90 bp ATTCTGTTTAATTTAATGCACAAATCTCAGAGGAAAAGGGCCACAGGCATTCAGGGCAGCCTCTGCCTCTaGCTGGGCCCGGAGTTCTTC +
Preference number: 5 (lower is better)
Translates to: ILFNLMHKSQRKRATGIQGSLCL*LGPEFF
Trigger: GAAGAACTCCGGGCCCAGCAAGAGGCAGAGGCTGCC...CTGAATGCCTGTGGCCCTTTTCCTCTGAGATTTGTGCATTAAATTAAACAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006254.6
CDS TCA 90 bp CATGAAGGATCGAACTGTGTTCTGCCTCCGTTCGTAAGCTTCTGGTaGGATCTCGTATTTCTCCACTTTGGACACATCCTCATACTCTCC +
Preference number: 5 (lower is better)
Translates to: HEGSNCVLPPFVSFW*DLVFLHFGHILILS
Trigger: GGAGAGTATGAGGATGTGTCCAAAGTGGAGAAATACGAGATCTCACCAGAAGCTTACGAACGGAGGCAGAACACAGTTCGATCCTTCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006254.6
CDS-3UTR CAA 90 bp ATTCTGTTTAATTTAATGCACAAATCTCAGAGGAAAAGGGCCACAGGCATTCAGTCCGAACGGAAGCTGTaGAGGGAGCTGCTGATGAAA +
Preference number: 5 (lower is better)
Translates to: ILFNLMHKSQRKRATGIQSERKL*RELLMK
Trigger: TTTCATCAGCAGCTCCCTCAACAGCTTCCGTTCGGA...CTGAATGCCTGTGGCCCTTTTCCTCTGAGATTTGTGCATTAAATTAAACAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006254.6
CDS CAA 90 bp GGGTGCCCGCACCTCACAACGGCTCCCCACAGAGATGGCACTGGCTaGGGCCTTCTCCTCACTGAGACGCTGGGCAGCCTCTGCCTCTTG +
Preference number: 6 (lower is better)
Translates to: GCPHLTTAPHRDGTG*GLLLTETLGSLCLL
Trigger: CAAGAGGCAGAGGCTGCCCAGCGTCTCAGTGAGGAGAAGGCCCAAGCCAGTGCCATCTCTGTGGGGAGCCGTTGTGAGGTGCGGGCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006254.6
CDS GCA 72 bp ATACATGACAGTGCCCCTGCGAAGGGAGTGGTCGGGTaGCCGCACCTCACAACGGCTCCCCACAGAGATGGC +
Preference number: 6 (lower is better)
Translates to: IHDSAPAKGVVG*PHLTTAPHRDG
Trigger: GCCATCTCTGTGGGGAGCCGTTGTGAGGTGCGGGCACCCGACCACTCCCTTCGCAGGGGCACTGTCATGTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006254.6
CDS CCA 72 bp ACCTCACAACGGCTCCCCACAGAGATGGCACTGGCTTaGGCCTTCTCCTCACTGAGACGCTGGGCAGCCTCT +
Preference number: 6 (lower is better)
Translates to: TSQRLPTEMALA*AFSSLRRWAAS
Trigger: AGAGGCTGCCCAGCGTCTCAGTGAGGAGAAGGCCCAAGCCAGTGCCATCTCTGTGGGGAGCCGTTGTGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006254.6
CDS CCA 72 bp AGTCCTACATACATGACAGTGCCCCTGCGAAGGGAGTaGTCGGGTGCCCGCACCTCACAACGGCTCCCCACA +
Preference number: 6 (lower is better)
Translates to: SPTYMTVPLRRE*SGARTSQRLPT
Trigger: TGTGGGGAGCCGTTGTGAGGTGCGGGCACCCGACCACTCCCTTCGCAGGGGCACTGTCATGTATGTAGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006254.6
CDS CAA 90 bp AGACGCTGGGCAGCCTCTGCCTCTTGCTGGGCCCGGAGTTCTTCATaGTACGGGCCTAGCTTGCTGCGTTTCATGAAGGATCGAACTGTG +
Preference number: 6 (lower is better)
Translates to: RRWAASASCWARSSS*YGPSLLRFMKDRTV
Trigger: CACAGTTCGATCCTTCATGAAACGCAGCAAGCTAGGCCCGTACAATGAAGAACTCCGGGCCCAGCAAGAGGCAGAGGCTGCCCAGCGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006254.6
CDS CAA 90 bp GCGATGGTGAGGCTACGACTGTATCGCTTCTCCGAACGGAAGCTGTaGAGGGAGCTGCTGATGAAAACCATCACGGTGGGCGCCGATATC +
Preference number: 6 (lower is better)
Translates to: AMVRLRLYRFSERKL*RELLMKTITVGADI
Trigger: GATATCGGCGCCCACCGTGATGGTTTTCATCAGCAGCTCCCTCAACAGCTTCCGTTCGGAGAAGCGATACAGTCGTAGCCTCACCATCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006254.6
CDS CCA 72 bp GACACATCCTCATACTCTCCGAGCCGGACGCCACTGTaGTCAATGACATGGATGCGACAGCCGTCATCCACA +
Preference number: 6 (lower is better)
Translates to: DTSSYSPSRTPL*SMTWMRQPSST
Trigger: TGTGGATGACGGCTGTCGCATCCATGTCATTGACCACAGTGGCGTCCGGCTCGGAGAGTATGAGGATGTGTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006254.6
CDS CAA 72 bp GCAGCCTCTGCCTCTTGCTGGGCCCGGAGTTCTTCATaGTACGGGCCTAGCTTGCTGCGTTTCATGAAGGAT +
Preference number: 6 (lower is better)
Translates to: AASASCWARSSS*YGPSLLRFMKD
Trigger: ATCCTTCATGAAACGCAGCAAGCTAGGCCCGTACAATGAAGAACTCCGGGCCCAGCAAGAGGCAGAGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006254.6
CDS GCA 72 bp AGAACTTGTCGTCTGCTCCATATAGCTCCAGTTCCATaGAGGAAGCAGGGCTGCCCACCACCAGCTCCAGTT +
Preference number: 6 (lower is better)
Translates to: RTCRLLHIAPVP*RKQGCPPPAPV
Trigger: AACTGGAGCTGGTGGTGGGCAGCCCTGCTTCCTGCATGGAACTGGAGCTATATGGAGCAGACGACAAGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006254.6
CDS GCA 72 bp GCGACAGCCGTCATCCACAGGATAGGAGCCCAGCAGTaGATCCTCCTGATCCAACTTGCTGTAGAACTTGTC +
Preference number: 6 (lower is better)
Translates to: ATAVIHRIGAQQ*ILLIQLAVELV
Trigger: GACAAGTTCTACAGCAAGTTGGATCAGGAGGATGCACTGCTGGGCTCCTATCCTGTGGATGACGGCTGTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006254.6
CDS CAA 72 bp AGGCTACGACTGTATCGCTTCTCCGAACGGAAGCTGTaGAGGGAGCTGCTGATGAAAACCATCACGGTGGGC +
Preference number: 6 (lower is better)
Translates to: RLRLYRFSERKL*RELLMKTITVG
Trigger: GCCCACCGTGATGGTTTTCATCAGCAGCTCCCTCAACAGCTTCCGTTCGGAGAAGCGATACAGTCGTAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006254.6
CDS TCA 72 bp CCAACCCGTAGTCCTCCTCTGGGAAATCTCCTACGGTaGCAGCTGATGGCTTTACAAAGGCACCATACTTGG +
Preference number: 6 (lower is better)
Translates to: PTRSPPLGNLLR*QLMALQRHHTW
Trigger: CCAAGTATGGTGCCTTTGTAAAGCCATCAGCTGTCACCGTAGGAGATTTCCCAGAGGAGGACTACGGGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006254.6
CDS CCA 72 bp CGTAAGCTTCTGGTGAGATCTCGTATTTCTCCACTTTaGACACATCCTCATACTCTCCGAGCCGGACGCCAC +
Preference number: 6 (lower is better)
Translates to: RKLLVRSRISPL*THPHTLRAGRH
Trigger: GTGGCGTCCGGCTCGGAGAGTATGAGGATGTGTCCAAAGTGGAGAAATACGAGATCTCACCAGAAGCTTACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006254.6
CDS GCA 72 bp GATAGGAGCCCAGCAGTGCATCCTCCTGATCCAACTTaGTGTAGAACTTGTCGTCTGCTCCATATAGCTCCA +
Preference number: 6 (lower is better)
Translates to: DRSPAVHPPDPT*CRTCRLLHIAP
Trigger: TGGAGCTATATGGAGCAGACGACAAGTTCTACAGCAAGTTGGATCAGGAGGATGCACTGCTGGGCTCCTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006254.6
CDS TCA 72 bp GTTCTTCATTGTACGGGCCTAGCTTGCTGCGTTTCATaGAGGATCGAACTGTGTTCTGCCTCCGTTCGTAAG +
Preference number: 6 (lower is better)
Translates to: VLHCTGLACCVS*RIELCSASVRK
Trigger: CTTACGAACGGAGGCAGAACACAGTTCGATCCTTCATGAAACGCAGCAAGCTAGGCCCGTACAATGAAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006254.6