Pregenerated sensors for TBCA (Mus musculus)

Ensembl gene IDs: ENSMUSG00000042043

Ensembl transcript IDs: ENSMUST00000046644.7, ENSMUST00000220825.2

Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS-3UTR GCA 90 bp	CAACTGCATAAAAAGAACCACGTTTTCATATTATTAAACACAGCAGTGGCTGAACTCTTGCAGGATCTCTaGCTGCTTCTTAATGGCGTA	+
Preference number: 4 (lower is better) Translates to: QLHKKNHVFILLNTAVAELLQDL*LLLNGV Trigger: TACGCCATTAAGAAGCAGGCAGAGATCCTGCAAGAG...TTCAGCCACTGCTGTGTTTAATAATATGAAAACGTGGTTCTTTTTATGCAGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046644.7 ENSMUST00000220825.2
CDS-3UTR TCA 90 bp	CAACTGCATAAAAAGAACCACGTTTTCATATTATTAAACACAGCAGTGGCTGAACTTTCTAATATCTGCTaGAGATCAGTATATGCAGCC	+
Preference number: 4 (lower is better) Translates to: QLHKKNHVFILLNTAVAELSNIC*RSVYAA Trigger: GGCTGCATATACTGATCTTCAGCAGATATTAGAAAG...TTCAGCCACTGCTGTGTTTAATAATATGAAAACGTGGTTCTTTTTATGCAGTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046644.7 ENSMUST00000220825.2

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