Pregenerated sensors for TBC1D8B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042473Ensembl transcript IDs: ENSMUST00000096313.4
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTTTTTCTTCTGCCTTGGAGCACATCAGTAATGCAACATATCCCTaGGAAGTATTCCCAGGAATCAGGCTGATAGTGCAGGAATCTTGG | + |
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Preference number: 1 (lower is better) Translates to: SFSSALEHISNATYP*EVFPGIRLIVQESW Trigger: CCAAGATTCCTGCACTATCAGCCTGATTCCTGGGAATACTTCTCAGGGATATGTTGCATTACTGATGTGCTCCAAGGCAGAAGAAAAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| 3UTR GCA 90 bp | GATTTGTGTTTATCAGCAACAGAGTTAGTAGCGTTAAACACCGAGTaGTCAATCCCTCGAGAGCAGAGAATGCAGAAGTTGCATGTATTA | + |
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Preference number: 1 (lower is better) Translates to: DLCLSATELVALNTE*SIPREQRMQKLHVL Trigger: TAATACATGCAACTTCTGCATTCTCTGCTCTCGAGGGATTGAGCACTCGGTGTTTAACGCTACTAACTCTGTTGCTGATAAACACAAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| 3UTR-3UTR TCA 90 bp | TTGGTCACCATGAAGGAAGTCTATCCTTTCATTGTTTCCCTTCTAGCCAAGTCACTCTGGTGGTCCCACTaGGCATGTGACCCTGATGCT | + |
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Preference number: 2 (lower is better) Translates to: LVTMKEVYPFIVSLLAKSLWWSH*ACDPDA Trigger: AGCATCAGGGTCACATGCTCAGTGGGACCACCAGAG...TGACTTGGCTAGAAGGGAAACAATGAAAGGATAGACTTCCTTCATGGTGACCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| 3UTR-3UTR CCA 90 bp | TCTTCAAAAGCGGCAGAAGACAGGTCAGGTCTGCATGGATTGCTTGTTTTTGTTCTCACTAAAGTGATATaGTGGCGCCCTCTGGTGGTC | + |
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Preference number: 2 (lower is better) Translates to: SSKAAEDRSGLHGLLVFVLTKVI*WRPLVV Trigger: GACCACCAGAGGGCGCCACCATATCACTTTAGTGAG...AACAAAAACAAGCAATCCATGCAGACCTGACCTGTCTTCTGCCGCTTTTGAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| 3UTR-3UTR CCA 90 bp | GCTGGGACACAAGCAATCAGAAGCTATTCTGAAACCAAAGCAATAAACAATGCCACTAAAGTGATATGGTaGCGCCCTCTGGTGGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: AGTQAIRSYSETKAINNATKVIW*RPLVVP Trigger: TGGGACCACCAGAGGGCGCCACCATATCACTTTAGT...GGCATTGTTTATTGCTTTGGTTTCAGAATAGCTTCTGATTGCTTGTGTCCCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| 3UTR-3UTR CCA 90 bp | ACAGTACGTTCTTGTCAAAGACTGACCATGCCAATTCTTTCCCAGAAAGGGAGAAGACCAGCAATCTCATaGAAACAGCAGGACAAACTT | + |
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Preference number: 2 (lower is better) Translates to: TVRSCQRLTMPILSQKGRRPAIS*KQQDKL Trigger: AAGTTTGTCCTGCTGTTTCCATGAGATTGCTGGTCT...TCTCCCTTTCTGGGAAAGAATTGGCATGGTCAGTCTTTGACAAGAACGTACTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| 3UTR-3UTR CCA 90 bp | ACAGTACGTTCTTGTCAAAGACTGACCATGCCAATTCTTTCCCAGAAAGGGAGACAGGTCAGGTCTGCATaGATTGCTTGTTTTTGTTTG | + |
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Preference number: 2 (lower is better) Translates to: TVRSCQRLTMPILSQKGRQVRSA*IACFCL Trigger: CAAACAAAAACAAGCAATCCATGCAGACCTGACCTG...TCTCCCTTTCTGGGAAAGAATTGGCATGGTCAGTCTTTGACAAGAACGTACTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| 3UTR CAA 90 bp | TCAAAGACTGACCATGCCAATTCTTTCCCAGAAAGGGAGACTTGTTaGGTCACCATGAAGGAAGTCTATCCTTTCATTGTTTCCCTTCTA | + |
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Preference number: 2 (lower is better) Translates to: SKTDHANSFPERETC*VTMKEVYPFIVSLL Trigger: TAGAAGGGAAACAATGAAAGGATAGACTTCCTTCATGGTGACCAAACAAGTCTCCCTTTCTGGGAAAGAATTGGCATGGTCAGTCTTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| 3UTR CAA 90 bp | GTATGTGGTATGGTAACACAGTTAGGTTTTAGTCACAGTACGTTCTaGTCAAAGACTGACCATGCCAATTCTTTCCCAGAAAGGGAGACT | + |
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Preference number: 2 (lower is better) Translates to: VCGMVTQLGFSHSTF*SKTDHANSFPERET Trigger: AGTCTCCCTTTCTGGGAAAGAATTGGCATGGTCAGTCTTTGACAAGAACGTACTGTGACTAAAACCTAACTGTGTTACCATACCACATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| 3UTR-3UTR TCA 90 bp | TCTTCAAAAGCGGCAGAAGACAGGTCAGGTCTGCATGGATTGCTTGTTTTTGTTAAGACTGGGGTCATTTaGAAAACAAGGCTTACCAAT | + |
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Preference number: 2 (lower is better) Translates to: SSKAAEDRSGLHGLLVFVKTGVI*KTRLTN Trigger: ATTGGTAAGCCTTGTTTTTCAAATGACCCCAGTCTT...AACAAAAACAAGCAATCCATGCAGACCTGACCTGTCTTCTGCCGCTTTTGAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| 3UTR-3UTR GCA 90 bp | TTGGTCACCATGAAGGAAGTCTATCCTTTCATTGTTTCCCTTCTAGCCAAGTCAAAGACAGGTCAGGTCTaGATGGATTGCTTGTTTTTG | + |
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Preference number: 2 (lower is better) Translates to: LVTMKEVYPFIVSLLAKSKTGQV*MDCLFL Trigger: CAAAAACAAGCAATCCATGCAGACCTGACCTGTCTT...TGACTTGGCTAGAAGGGAAACAATGAAAGGATAGACTTCCTTCATGGTGACCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| 3UTR-3UTR CCA 90 bp | ACAGTACGTTCTTGTCAAAGACTGACCATGCCAATTCTTTCCCAGAAAGGGAGATTCAAACTACAAAGCTaGGACACAAGCAATCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: TVRSCQRLTMPILSQKGRFKLQS*DTSNQK Trigger: CTTCTGATTGCTTGTGTCCCAGCTTTGTAGTTTGAA...TCTCCCTTTCTGGGAAAGAATTGGCATGGTCAGTCTTTGACAAGAACGTACTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| 3UTR-3UTR TCA 90 bp | CAGAAGACAGGTCAGGTCTGCATGGATTGCTTGTTTTTGTTTGTTTGTTGTTTTGAACCATTGTGCTTCTaGGTATCTTTTTCTTCTGCC | + |
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Preference number: 2 (lower is better) Translates to: QKTGQVCMDCLFLFVCCFEPLCF*VSFSSA Trigger: GGCAGAAGAAAAAGATACTCAGAAGCACAATGGTTC...AAAACAACAAACAAACAAAAACAAGCAATCCATGCAGACCTGACCTGTCTTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| 3UTR-3UTR TCA 90 bp | CAGAAGACAGGTCAGGTCTGCATGGATTGCTTGTTTTTGTTTGTTTGTTGTTTTGGACAAACTTGTGACTaGCTCACTAAAGTGATATGG | + |
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Preference number: 2 (lower is better) Translates to: QKTGQVCMDCLFLFVCCFGQTCD*LTKVIW Trigger: CCATATCACTTTAGTGAGTCAGTCACAAGTTTGTCC...AAAACAACAAACAAACAAAAACAAGCAATCCATGCAGACCTGACCTGTCTTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| 3UTR-3UTR TCA 90 bp | TTGGTCACCATGAAGGAAGTCTATCCTTTCATTGTTTCCCTTCTAGCCAAGTCAGTGTCTCAGTCTAACTaGAAGAGCTATATAGTTAAC | + |
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Preference number: 2 (lower is better) Translates to: LVTMKEVYPFIVSLLAKSVSQSN*KSYIVN Trigger: GTTAACTATATAGCTCTTTCAGTTAGACTGAGACAC...TGACTTGGCTAGAAGGGAAACAATGAAAGGATAGACTTCCTTCATGGTGACCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| 3UTR-3UTR GCA 90 bp | TACAAAGCTGGGACACAAGCAATCAGAAGCTATTCTGAAACCAAAGCAATAAACCTCGAGAGCAGAGAATaGAGAAGTTGCATGTATTAC | + |
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Preference number: 2 (lower is better) Translates to: YKAGTQAIRSYSETKAINLESRE*RSCMYY Trigger: GTAATACATGCAACTTCTGCATTCTCTGCTCTCGAG...GTTTATTGCTTTGGTTTCAGAATAGCTTCTGATTGCTTGTGTCCCAGCTTTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| 3UTR-3UTR CCA 90 bp | TCCTTTCATTGTTTCCCTTCTAGCCAAGTCAGAGGCTCGAAATCCAAGTCTAGTTTTTTAGGTAGATGCTaGCAATTCTATATAGTACCC | + |
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Preference number: 2 (lower is better) Translates to: SFHCFPSSQVRGSKSKSSFLGRC*QFYIVP Trigger: GGGTACTATATAGAATTGCCAGCATCTACCTAAAAA...ACTAGACTTGGATTTCGAGCCTCTGACTTGGCTAGAAGGGAAACAATGAAAGGA 40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| 3UTR-3UTR GCA 90 bp | CAGAAGACAGGTCAGGTCTGCATGGATTGCTTGTTTTTGTTTGTTTGTTGTTTTAGAGAATGCAGAAGTTaGATGTATTACTGTAAAACC | + |
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Preference number: 2 (lower is better) Translates to: QKTGQVCMDCLFLFVCCFRECRS*MYYCKT Trigger: GGTTTTACAGTAATACATGCAACTTCTGCATTCTCT...AAAACAACAAACAAACAAAAACAAGCAATCCATGCAGACCTGACCTGTCTTCTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| 3UTR TCA 72 bp | CTAGCCAAGTCAGAGGCTCGAAATCCAAGTCTAGTGTaGAGACAGAAGCTCCACACACTGGTTCCTGCCCCA | + |
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Preference number: 3 (lower is better) Translates to: LAKSEARNPSLV*RQKLHTLVPAP Trigger: TGGGGCAGGAACCAGTGTGTGGAGCTTCTGTCTTCACACTAGACTTGGATTTCGAGCCTCTGACTTGGCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| 3UTR TCA 72 bp | TCTGCCTTGGAGCACATCAGTAATGCAACATATCCCTaGGAAGTATTCCCAGGAATCAGGCTGATAGTGCAG | + |
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Preference number: 3 (lower is better) Translates to: SALEHISNATYP*EVFPGIRLIVQ Trigger: CTGCACTATCAGCCTGATTCCTGGGAATACTTCTCAGGGATATGTTGCATTACTGATGTGCTCCAAGGCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| 3UTR-3UTR CAA 90 bp | TCTTCAAAAGCGGCAGAAGACAGGTCAGGTCTGCATGGATTGCTTGTTTTTGTTGATAGTGCAGGAATCTaGGCAAAGCTGATGATGGCA | + |
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Preference number: 3 (lower is better) Translates to: SSKAAEDRSGLHGLLVFVDSAGI*AKLMMA Trigger: TGCCATCATCAGCTTTGCCAAGATTCCTGCACTATC...AACAAAAACAAGCAATCCATGCAGACCTGACCTGTCTTCTGCCGCTTTTGAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| 3UTR GCA 72 bp | TTATCAGCAACAGAGTTAGTAGCGTTAAACACCGAGTaGTCAATCCCTCGAGAGCAGAGAATGCAGAAGTTG | + |
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Preference number: 3 (lower is better) Translates to: LSATELVALNTE*SIPREQRMQKL Trigger: CAACTTCTGCATTCTCTGCTCTCGAGGGATTGAGCACTCGGTGTTTAACGCTACTAACTCTGTTGCTGATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| 3UTR-3UTR CAA 90 bp | TCTTCAAAAGCGGCAGAAGACAGGTCAGGTCTGCATGGATTGCTTGTTTTTGTTTCTTTTTCTTCTGCCTaGGAGCACATCAGTAATGCA | + |
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Preference number: 3 (lower is better) Translates to: SSKAAEDRSGLHGLLVFVSFSSA*EHISNA Trigger: TGCATTACTGATGTGCTCCAAGGCAGAAGAAAAAGA...AACAAAAACAAGCAATCCATGCAGACCTGACCTGTCTTCTGCCGCTTTTGAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| 3UTR GCA 72 bp | GTCCCTCTTCAAAAGCGGCAGAAGACAGGTCAGGTCTaGATGGATTGCTTGTTTTTGTTTGTTTGTTGTTTT | + |
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Preference number: 3 (lower is better) Translates to: VPLQKRQKTGQV*MDCLFLFVCCF Trigger: AAAACAACAAACAAACAAAAACAAGCAATCCATGCAGACCTGACCTGTCTTCTGCCGCTTTTGAAGAGGGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| 3UTR GCA 72 bp | AGTGCTCAATCCCTCGAGAGCAGAGAATGCAGAAGTTaGATGTATTACTGTAAAACCATGTATTACTGTACT | + |
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Preference number: 3 (lower is better) Translates to: SAQSLESRECRS*MYYCKTMYYCT Trigger: AGTACAGTAATACATGGTTTTACAGTAATACATGCAACTTCTGCATTCTCTGCTCTCGAGGGATTGAGCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS-3UTR TCA 90 bp | ACAGTACGTTCTTGTCAAAGACTGACCATGCCAATTCTTTCCCAGAAAGGGAGAGGCAGGCTGGGGTCATaGTGCTTCAATCCTGGACAA | + |
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Preference number: 4 (lower is better) Translates to: TVRSCQRLTMPILSQKGRGRLGS*CFNPGQ Trigger: TTGTCCAGGATTGAAGCATCATGACCCCAGCCTGCC...TCTCCCTTTCTGGGAAAGAATTGGCATGGTCAGTCTTTGACAAGAACGTACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS-3UTR GCA 90 bp | TCCTTTCATTGTTTCCCTTCTAGCCAAGTCAGAGGCTCGAAATCCAAGTCTAGTCTTCACACTGCTCTCTaGATTCCCTTCACTGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: SFHCFPSSQVRGSKSKSSLHTAL*IPFTGS Trigger: GGACCCAGTGAAGGGAATGCAGAGAGCAGTGTGAAG...ACTAGACTTGGATTTCGAGCCTCTGACTTGGCTAGAAGGGAAACAATGAAAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS-3UTR TCA 90 bp | TTGGTCACCATGAAGGAAGTCTATCCTTTCATTGTTTCCCTTCTAGCCAAGTCATCTCTGTTTGCAGAATaGGCCCAGGGACTCAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: LVTMKEVYPFIVSLLAKSSLFAE*AQGLSK Trigger: CTTGCTGAGTCCCTGGGCTCATTCTGCAAACAGAGA...TGACTTGGCTAGAAGGGAAACAATGAAAGGATAGACTTCCTTCATGGTGACCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS-3UTR CCA 90 bp | ATAAGTCCCTCTTCAAAAGCGGCAGAAGACAGGTCAGGTCTGCATGGATTGCTTTTTGCTGCATTCCTTTaGACATGTCAAAGGCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: ISPSSKAAEDRSGLHGLLFAAFL*TCQRLL Trigger: GAGCAGCCTTTGACATGTCCAAAGGAATGCAGCAAA...AAGCAATCCATGCAGACCTGACCTGTCTTCTGCCGCTTTTGAAGAGGGACTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS-3UTR CCA 90 bp | GCTCAATCCCTCGAGAGCAGAGAATGCAGAAGTTGCATGTATTACTGTAAAACCATCACTCTGAAATGCTaGATGTTCGGGCAGAGAGCG | + |
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Preference number: 4 (lower is better) Translates to: AQSLESRECRSCMYYCKTITLKC*MFGQRA Trigger: CGCTCTCTGCCCGAACATCCAGCATTTCAGAGTGAT...GGTTTTACAGTAATACATGCAACTTCTGCATTCTCTGCTCTCGAGGGATTGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS-3UTR TCA 90 bp | ACCACCTTTCAAAAGACCAGCAATCTCATGGAAACAGCAGGACAAACTTGTGACGTCATTAACAGCACCTaGGAAAAGCATCCAGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: TTFQKTSNLMETAGQTCDVINST*EKHPEL Trigger: GAGCTCTGGATGCTTTTCTCAGGTGCTGTTAATGAC...GTCACAAGTTTGTCCTGCTGTTTCCATGAGATTGCTGGTCTTTTGAAAGGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS-3UTR TCA 90 bp | TCTTCAAAAGCGGCAGAAGACAGGTCAGGTCTGCATGGATTGCTTGTTTTTGTTACCCTGTTGAACATTTaGAGGCAGTGGGCTATCCTT | + |
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Preference number: 4 (lower is better) Translates to: SSKAAEDRSGLHGLLVFVTLLNI*RQWAIL Trigger: AAGGATAGCCCACTGCCTTCAAATGTTCAACAGGGT...AACAAAAACAAGCAATCCATGCAGACCTGACCTGTCTTCTGCCGCTTTTGAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS-3UTR GCA 90 bp | GCTGGGACACAAGCAATCAGAAGCTATTCTGAAACCAAAGCAATAAACAATGCCAAGTTCTTCAAACACTaGCTGGTCCACCAAGGCACC | + |
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Preference number: 4 (lower is better) Translates to: AGTQAIRSYSETKAINNAKFFKH*LVHQGT Trigger: GGTGCCTTGGTGGACCAGGCAGTGTTTGAAGAACTT...GGCATTGTTTATTGCTTTGGTTTCAGAATAGCTTCTGATTGCTTGTGTCCCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS-3UTR CCA 90 bp | ATAAGTCCCTCTTCAAAAGCGGCAGAAGACAGGTCAGGTCTGCATGGATTGCTTTTGAATTGCTCACTGTaGGCTCGATATTCCAAACCT | + |
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Preference number: 4 (lower is better) Translates to: ISPSSKAAEDRSGLHGLLLNCSL*ARYSKP Trigger: AGGTTTGGAATATCGAGCCCACAGTGAGCAATTCAA...AAGCAATCCATGCAGACCTGACCTGTCTTCTGCCGCTTTTGAAGAGGGACTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS-3UTR CCA 90 bp | TTGGTCACCATGAAGGAAGTCTATCCTTTCATTGTTTCCCTTCTAGCCAAGTCATCTTCAAACACTGCCTaGTCCACCAAGGCACCAATG | + |
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Preference number: 4 (lower is better) Translates to: LVTMKEVYPFIVSLLAKSSSNTA*STKAPM Trigger: CATTGGTGCCTTGGTGGACCAGGCAGTGTTTGAAGA...TGACTTGGCTAGAAGGGAAACAATGAAAGGATAGACTTCCTTCATGGTGACCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS-3UTR CCA 90 bp | TCTTCAAAAGCGGCAGAAGACAGGTCAGGTCTGCATGGATTGCTTGTTTTTGTTGATGATGCCGGGCTATaGAGTTTCCTTCCAACTTCT | + |
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Preference number: 4 (lower is better) Translates to: SSKAAEDRSGLHGLLVFVDDAGL*SFLPTS Trigger: AGAAGTTGGAAGGAAACTCCATAGCCCGGCATCATC...AACAAAAACAAGCAATCCATGCAGACCTGACCTGTCTTCTGCCGCTTTTGAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS-3UTR TCA 90 bp | TCTTCAAAAGCGGCAGAAGACAGGTCAGGTCTGCATGGATTGCTTGTTTTTGTTGGCTCCACATGCAATTaGCAAGTACACTTGAGAATC | + |
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Preference number: 4 (lower is better) Translates to: SSKAAEDRSGLHGLLVFVGSTCN*QVHLRI Trigger: GATTCTCAAGTGTACTTGTCAATTGCATGTGGAGCC...AACAAAAACAAGCAATCCATGCAGACCTGACCTGTCTTCTGCCGCTTTTGAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS-3UTR TCA 90 bp | ACCACCTTTCAAAAGACCAGCAATCTCATGGAAACAGCAGGACAAACTTGTGACCAACTTCTTCCATCCTaGGCAGAAGGTTGGTTACAA | + |
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Preference number: 4 (lower is better) Translates to: TTFQKTSNLMETAGQTCDQLLPS*AEGWLQ Trigger: TTGTAACCAACCTTCTGCTCAGGATGGAAGAAGTTG...GTCACAAGTTTGTCCTGCTGTTTCCATGAGATTGCTGGTCTTTTGAAAGGTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS-3UTR GCA 90 bp | TCCTTTCATTGTTTCCCTTCTAGCCAAGTCAGAGGCTCGAAATCCAAGTCTAGTATAGCCAGGGTTTGTTaGCATGTCATTAACAGCACC | + |
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Preference number: 4 (lower is better) Translates to: SFHCFPSSQVRGSKSKSSIARVC*HVINST Trigger: GGTGCTGTTAATGACATGGCAACAAACCCTGGCTAT...ACTAGACTTGGATTTCGAGCCTCTGACTTGGCTAGAAGGGAAACAATGAAAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS-3UTR GCA 90 bp | ACCACCTTTCAAAAGACCAGCAATCTCATGGAAACAGCAGGACAAACTTGTGACGCCTCAGAGCAGATATaGCAGTATCACTCTGAAATG | + |
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Preference number: 4 (lower is better) Translates to: TTFQKTSNLMETAGQTCDASEQI*QYHSEM Trigger: CATTTCAGAGTGATACTGGCATATCTGCTCTGAGGC...GTCACAAGTTTGTCCTGCTGTTTCCATGAGATTGCTGGTCTTTTGAAAGGTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS-3UTR GCA 90 bp | TCTTCAAAAGCGGCAGAAGACAGGTCAGGTCTGCATGGATTGCTTGTTTTTGTTACACGTAGCACATTCTaGTTTGTTGTCTCTTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: SSKAAEDRSGLHGLLVFVTRSTF*FVVSSR Trigger: CCTGGAAGAGACAACAAAGCAGAATGTGCTACGTGT...AACAAAAACAAGCAATCCATGCAGACCTGACCTGTCTTCTGCCGCTTTTGAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS-3UTR GCA 90 bp | ACCACCTTTCAAAAGACCAGCAATCTCATGGAAACAGCAGGACAAACTTGTGACAGGGAAGCAAGAATCTaGTCAAATGCAAACGACCAC | + |
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Preference number: 4 (lower is better) Translates to: TTFQKTSNLMETAGQTCDREARI*SNANDH Trigger: GTGGTCGTTTGCATTTGAGCAGATTCTTGCTTCCCT...GTCACAAGTTTGTCCTGCTGTTTCCATGAGATTGCTGGTCTTTTGAAAGGTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS-3UTR CCA 90 bp | TCCTTTCATTGTTTCCCTTCTAGCCAAGTCAGAGGCTCGAAATCCAAGTCTAGTGGACAAAGTACTCGTTaGATCTTTCCATCAGCCACA | + |
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Preference number: 4 (lower is better) Translates to: SFHCFPSSQVRGSKSKSSGQSTR*IFPSAT Trigger: TGTGGCTGATGGAAAGATCCAACGAGTACTTTGTCC...ACTAGACTTGGATTTCGAGCCTCTGACTTGGCTAGAAGGGAAACAATGAAAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS-3UTR TCA 90 bp | GTACGTTCTTGTCAAAGACTGACCATGCCAATTCTTTCCCAGAAAGGGAGACTTATTGACAAGTACACTTaGGAATCTGGTGTCTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: VRSCQRLTMPILSQKGRLIDKYT*ESGVWC Trigger: ACACCAGACACCAGATTCTCAAGTGTACTTGTCAAT...AAGTCTCCCTTTCTGGGAAAGAATTGGCATGGTCAGTCTTTGACAAGAACGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS-3UTR TCA 90 bp | ACCACCTTTCAAAAGACCAGCAATCTCATGGAAACAGCAGGACAAACTTGTGACATGCACATTTTTCCGTaGCTACTGAAGTGGCTGAAT | + |
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Preference number: 4 (lower is better) Translates to: TTFQKTSNLMETAGQTCDMHIFP*LLKWLN Trigger: ATTCAGCCACTTCAGTAGTCACGGAAAAATGTGCAT...GTCACAAGTTTGTCCTGCTGTTTCCATGAGATTGCTGGTCTTTTGAAAGGTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS-3UTR TCA 90 bp | CAGAAGACAGGTCAGGTCTGCATGGATTGCTTGTTTTTGTTTGTTTGTTGTTTTATGCCAGTATCACTCTaGAATGCTGGATGTTCGGGC | + |
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Preference number: 4 (lower is better) Translates to: QKTGQVCMDCLFLFVCCFMPVSL*NAGCSG Trigger: GCCCGAACATCCAGCATTTCAGAGTGATACTGGCAT...AAAACAACAAACAAACAAAAACAAGCAATCCATGCAGACCTGACCTGTCTTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS-3UTR TCA 90 bp | TCTTCAAAAGCGGCAGAAGACAGGTCAGGTCTGCATGGATTGCTTGTTTTTGTTTGCTGGCAGTCAATCTaGTATTGTTCCAAATATGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSKAAEDRSGLHGLLVFVCWQSI*YCSKYG Trigger: GCCATATTTGGAACAATATCAGATTGACTGCCAGCA...AACAAAAACAAGCAATCCATGCAGACCTGACCTGTCTTCTGCCGCTTTTGAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
||
| CDS-3UTR TCA 90 bp | GCTCAATCCCTCGAGAGCAGAGAATGCAGAAGTTGCATGTATTACTGTAAAACCCAGGGACTCAGCAAGTaGTATAATACTCTGAATTGC | + |
|
Preference number: 4 (lower is better) Translates to: AQSLESRECRSCMYYCKTQGLSK*YNTLNC Trigger: GCAATTCAGAGTATTATATCACTTGCTGAGTCCCTG...GGTTTTACAGTAATACATGCAACTTCTGCATTCTCTGCTCTCGAGGGATTGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
||
| CDS-3UTR GCA 90 bp | GCTGGGACACAAGCAATCAGAAGCTATTCTGAAACCAAAGCAATAAACAATGCCAGTATCACTCTGAAATaGTGGATGTTCGGGCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AGTQAIRSYSETKAINNASITLK*WMFGQR Trigger: TCTCTGCCCGAACATCCAGCATTTCAGAGTGATACT...GGCATTGTTTATTGCTTTGGTTTCAGAATAGCTTCTGATTGCTTGTGTCCCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
||
| CDS-3UTR GCA 90 bp | TCTTCAAAAGCGGCAGAAGACAGGTCAGGTCTGCATGGATTGCTTGTTTTTGTTCTCATTTTCACGTCTTaGGATACAACACGTAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: SSKAAEDRSGLHGLLVFVLIFTS*DTTRST Trigger: TGTGCTACGTGTTGTATCGCAAGACGTGAAAATGAG...AACAAAAACAAGCAATCCATGCAGACCTGACCTGTCTTCTGCCGCTTTTGAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
||
| CDS-3UTR CCA 90 bp | ATAAGTCCCTCTTCAAAAGCGGCAGAAGACAGGTCAGGTCTGCATGGATTGCTTAGGATCATCAAGGACTaGGTCATTATCAAATGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ISPSSKAAEDRSGLHGLLRIIKD*VIIKCF Trigger: GAAACATTTGATAATGACCCAGTCCTTGATGATCCT...AAGCAATCCATGCAGACCTGACCTGTCTTCTGCCGCTTTTGAAGAGGGACTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
||
| 3UTR CAA 72 bp | GACCATGCCAATTCTTTCCCAGAAAGGGAGACTTGTTaGGTCACCATGAAGGAAGTCTATCCTTTCATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: DHANSFPERETC*VTMKEVYPFIV Trigger: AACAATGAAAGGATAGACTTCCTTCATGGTGACCAAACAAGTCTCCCTTTCTGGGAAAGAATTGGCATGGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
||
| CDS-3UTR TCA 90 bp | TCCTTTCATTGTTTCCCTTCTAGCCAAGTCAGAGGCTCGAAATCCAAGTCTAGTAGTCTTTTCAAGTTTTaGGATTGCATCCCAGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SFHCFPSSQVRGSKSKSSSLFKF*DCIPGD Trigger: ATCTCCTGGGATGCAATCTCAAAACTTGAAAAGACT...ACTAGACTTGGATTTCGAGCCTCTGACTTGGCTAGAAGGGAAACAATGAAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
||
| CDS-3UTR TCA 90 bp | TCCTTTCATTGTTTCCCTTCTAGCCAAGTCAGAGGCTCGAAATCCAAGTCTAGTACAATAGCAATGGCTTaGTATAGCGACTCTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SFHCFPSSQVRGSKSKSSTIAMA*YSDSSS Trigger: TGAAGAAGAGTCGCTATATCAAGCCATTGCTATTGT...ACTAGACTTGGATTTCGAGCCTCTGACTTGGCTAGAAGGGAAACAATGAAAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
||
| CDS-3UTR GCA 90 bp | TCTTCAAAAGCGGCAGAAGACAGGTCAGGTCTGCATGGATTGCTTGTTTTTGTTTGTTCACAGTTTTGCTaGATTCCTTTGGACATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSKAAEDRSGLHGLLVFVCSQFC*IPLDMS Trigger: TGACATGTCCAAAGGAATGCAGCAAAACTGTGAACA...AACAAAAACAAGCAATCCATGCAGACCTGACCTGTCTTCTGCCGCTTTTGAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
||
| CDS-3UTR CCA 90 bp | TACAAAGCTGGGACACAAGCAATCAGAAGCTATTCTGAAACCAAAGCAATAAACCCAAATATGGCAGGCTaGGGTCATGATGCTTCAATC | + |
|
Preference number: 4 (lower is better) Translates to: YKAGTQAIRSYSETKAINPNMAG*GHDASI Trigger: GATTGAAGCATCATGACCCCAGCCTGCCATATTTGG...GTTTATTGCTTTGGTTTCAGAATAGCTTCTGATTGCTTGTGTCCCAGCTTTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
||
| CDS-3UTR TCA 90 bp | TCCTTTCATTGTTTCCCTTCTAGCCAAGTCAGAGGCTCGAAATCCAAGTCTAGTAGTGATATAATACTCTaGATTGCTGGCAGTCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: SFHCFPSSQVRGSKSKSSSDIIL*IAGSQS Trigger: AGATTGACTGCCAGCAATTCAGAGTATTATATCACT...ACTAGACTTGGATTTCGAGCCTCTGACTTGGCTAGAAGGGAAACAATGAAAGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
||
| CDS-3UTR TCA 90 bp | TCTTCAAAAGCGGCAGAAGACAGGTCAGGTCTGCATGGATTGCTTGTTTTTGTTAAACCTGGAGCTGACTaGAATAAAGTAATTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSKAAEDRSGLHGLLVFVKPGAD*NKVILL Trigger: CAGAAGAATTACTTTATTTCAGTCAGCTCCAGGTTT...AACAAAAACAAGCAATCCATGCAGACCTGACCTGTCTTCTGCCGCTTTTGAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
||
| CDS-3UTR GCA 90 bp | TCCTTTCATTGTTTCCCTTCTAGCCAAGTCAGAGGCTCGAAATCCAAGTCTAGTCTTTATGGCATAGTTTaGCAGTTGTTCCATAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SFHCFPSSQVRGSKSKSSLYGIV*QLFHKK Trigger: CTTCTTATGGAACAACTGGCAAACTATGCCATAAAG...ACTAGACTTGGATTTCGAGCCTCTGACTTGGCTAGAAGGGAAACAATGAAAGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
||
| CDS-3UTR GCA 90 bp | GCTGGGACACAAGCAATCAGAAGCTATTCTGAAACCAAAGCAATAAACAATGCCAGTTTTGCCACCAGTTaGTCAAAGTCTTTAAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: AGTQAIRSYSETKAINNASFATS*SKSLSS Trigger: TGAGCTTAAAGACTTTGAGCAACTGGTGGCAAAACT...GGCATTGTTTATTGCTTTGGTTTCAGAATAGCTTCTGATTGCTTGTGTCCCAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
||
| CDS-3UTR GCA 90 bp | ACAGGTCAGGTCTGCATGGATTGCTTGTTTTTGTTTGTTTGTTGTTTTGTTCTTCTTGAGCCTGAGTTTTaGCACCAGTTGCTCAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TGQVCMDCLFLFVCCFVLLEPEF*HQLLKV Trigger: GACTTTGAGCAACTGGTGGCAAAACTCAGGCTCAAG...AAGAACAAAACAACAAACAAACAAAAACAAGCAATCCATGCAGACCTGACCTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
||
| CDS-3UTR GCA 90 bp | TCCTTTCATTGTTTCCCTTCTAGCCAAGTCAGAGGCTCGAAATCCAAGTCTAGTTATTTCGACAGCGCATaGTATGTATATCTTCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: SFHCFPSSQVRGSKSKSSYFDSA*YVYLHS Trigger: GCTATGAAGATATACATAGCATGCGCTGTCGAAATA...ACTAGACTTGGATTTCGAGCCTCTGACTTGGCTAGAAGGGAAACAATGAAAGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
||
| CDS-3UTR GCA 90 bp | CAGAAGACAGGTCAGGTCTGCATGGATTGCTTGTTTTTGTTTGTTTGTTGTTTTGATCTTTCTTCACACTaGTCTCTGCATTCCCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QKTGQVCMDCLFLFVCCFDLSSH*SLHSLH Trigger: GTGAAGGGAATGCAGAGAGCAGTGTGAAGAAAGATC...AAAACAACAAACAAACAAAAACAAGCAATCCATGCAGACCTGACCTGTCTTCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
||
| CDS-3UTR GCA 90 bp | TTGGTCACCATGAAGGAAGTCTATCCTTTCATTGTTTCCCTTCTAGCCAAGTCAAAGAATCTGCTCAAATaGAAACGACCACTGATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LVTMKEVYPFIVSLLAKSKNLLK*KRPLMF Trigger: GAACATCAGTGGTCGTTTGCATTTGAGCAGATTCTT...TGACTTGGCTAGAAGGGAAACAATGAAAGGATAGACTTCCTTCATGGTGACCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
||
| CDS-3UTR CCA 90 bp | ACCACCTTTCAAAAGACCAGCAATCTCATGGAAACAGCAGGACAAACTTGTGACCACTTCAGTATAAGCTaGAGGAATATGCAGCTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: TTFQKTSNLMETAGQTCDHFSIS*RNMQLK Trigger: TTTAAGCTGCATATTCCTCCAGCTTATACTGAAGTG...GTCACAAGTTTGTCCTGCTGTTTCCATGAGATTGCTGGTCTTTTGAAAGGTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
||
| CDS-3UTR TCA 90 bp | CAGAAGACAGGTCAGGTCTGCATGGATTGCTTGTTTTTGTTTGTTTGTTGTTTTATATTTGAACCCTGTTaGACATTTGAAGGCAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QKTGQVCMDCLFLFVCCFIFEPC*TFEGSG Trigger: CCCACTGCCTTCAAATGTTCAACAGGGTTCAAATAT...AAAACAACAAACAAACAAAAACAAGCAATCCATGCAGACCTGACCTGTCTTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
||
| CDS-3UTR GCA 90 bp | TTGGTCACCATGAAGGAAGTCTATCCTTTCATTGTTTCCCTTCTAGCCAAGTCAGTCCTCTCCAGTAACTaGAGGAATAATAAGTTACTA | + |
|
Preference number: 4 (lower is better) Translates to: LVTMKEVYPFIVSLLAKSVLSSN*RNNKLL Trigger: TAGTAACTTATTATTCCTGCAGTTACTGGAGAGGAC...TGACTTGGCTAGAAGGGAAACAATGAAAGGATAGACTTCCTTCATGGTGACCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
||
| CDS-3UTR GCA 90 bp | CAGAAGACAGGTCAGGTCTGCATGGATTGCTTGTTTTTGTTTGTTTGTTGTTTTTTTGGGATTCCTATATaGATAAGCTGTCAGTACCCG | + |
|
Preference number: 4 (lower is better) Translates to: QKTGQVCMDCLFLFVCCFFGIPI*ISCQYP Trigger: CGGGTACTGACAGCTTATGCATATAGGAATCCCAAA...AAAACAACAAACAAACAAAAACAAGCAATCCATGCAGACCTGACCTGTCTTCTG 40% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
||
| CDS-3UTR GCA 90 bp | GTACGTTCTTGTCAAAGACTGACCATGCCAATTCTTTCCCAGAAAGGGAGACTTAGTCAAAATGTTCATTaGCTGGCAGTATCCTATTTT | + |
|
Preference number: 4 (lower is better) Translates to: VRSCQRLTMPILSQKGRLSQNVH*LAVSYF Trigger: AAAATAGGATACTGCCAGGCAATGAACATTTTGACT...AAGTCTCCCTTTCTGGGAAAGAATTGGCATGGTCAGTCTTTGACAAGAACGTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
||
| CDS-3UTR CCA 90 bp | TACAAAGCTGGGACACAAGCAATCAGAAGCTATTCTGAAACCAAAGCAATAAACAGAAGCTCAGAAAGTTaGTACTTAGATAGAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: YKAGTQAIRSYSETKAINRSSES*YLDRAS Trigger: GCTGGCTCTATCTAAGTACCAACTTTCTGAGCTTCT...GTTTATTGCTTTGGTTTCAGAATAGCTTCTGATTGCTTGTGTCCCAGCTTTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
||
| CDS-3UTR CCA 90 bp | CAGAAGACAGGTCAGGTCTGCATGGATTGCTTGTTTTTGTTTGTTTGTTGTTTTGTCTCTTCCAGGGTCTaGATCACATACAACCTATTT | + |
|
Preference number: 4 (lower is better) Translates to: QKTGQVCMDCLFLFVCCFVSSRV*ITYNLF Trigger: AAATAGGTTGTATGTGATCCAGACCCTGGAAGAGAC...AAAACAACAAACAAACAAAAACAAGCAATCCATGCAGACCTGACCTGTCTTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
||
| CDS-3UTR CCA 90 bp | GCTGGGACACAAGCAATCAGAAGCTATTCTGAAACCAAAGCAATAAACAATGCCCAAAAAGTCTCTTTATaGCATAGTTTGCCAGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: AGTQAIRSYSETKAINNAQKVSL*HSLPVV Trigger: AACAACTGGCAAACTATGCCATAAAGAGACTTTTTG...GGCATTGTTTATTGCTTTGGTTTCAGAATAGCTTCTGATTGCTTGTGTCCCAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
||
| CDS-3UTR TCA 90 bp | ACAGGTCAGGTCTGCATGGATTGCTTGTTTTTGTTTGTTTGTTGTTTTGTTCTTTCTTCAGGGTCCTCATaGAATAAATTATACAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TGQVCMDCLFLFVCCFVLSSGSS*NKLYRV Trigger: GACCCTGTATAATTTATTTCATGAGGACCCTGAAGA...AAGAACAAAACAACAAACAAACAAAAACAAGCAATCCATGCAGACCTGACCTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
||
| CDS-3UTR GCA 90 bp | ACAGGTCAGGTCTGCATGGATTGCTTGTTTTTGTTTGTTTGTTGTTTTGTTCTTAAAAAGGCTTTGAATTaGTCACTGTGGGCTCGATAT | + |
|
Preference number: 4 (lower is better) Translates to: TGQVCMDCLFLFVCCFVLKKALN*SLWARY Trigger: ATATCGAGCCCACAGTGAGCAATTCAAAGCCTTTTT...AAGAACAAAACAACAAACAAACAAAAACAAGCAATCCATGCAGACCTGACCTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
||
| CDS-3UTR CCA 90 bp | TACAAAGCTGGGACACAAGCAATCAGAAGCTATTCTGAAACCAAAGCAATAAACTTATTTCTTCTCTGTTaGCTCCACATGCAATTGACA | + |
|
Preference number: 4 (lower is better) Translates to: YKAGTQAIRSYSETKAINLFLLC*LHMQLT Trigger: TGTCAATTGCATGTGGAGCCAACAGAGAAGAAATAA...GTTTATTGCTTTGGTTTCAGAATAGCTTCTGATTGCTTGTGTCCCAGCTTTGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
||
| CDS-3UTR CCA 90 bp | TACAAAGCTGGGACACAAGCAATCAGAAGCTATTCTGAAACCAAAGCAATAAACTCGCATTTTCTAGCTTaGCTTTTAAATCTAAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: YKAGTQAIRSYSETKAINSHFLA*LLNLRV Trigger: GACCCTTAGATTTAAAAGCCAAGCTAGAAAATGCGA...GTTTATTGCTTTGGTTTCAGAATAGCTTCTGATTGCTTGTGTCCCAGCTTTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
||
| CDS-3UTR CCA 90 bp | ACAGGTCAGGTCTGCATGGATTGCTTGTTTTTGTTTGTTTGTTGTTTTGTTCTTAAAATGTTCATTGCCTaGCAGTATCCTATTTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TGQVCMDCLFLFVCCFVLKMFIA*QYPILG Trigger: TCCCAAAATAGGATACTGCCAGGCAATGAACATTTT...AAGAACAAAACAACAAACAAACAAAAACAAGCAATCCATGCAGACCTGACCTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
||
| CDS-3UTR CCA 90 bp | TACAAAGCTGGGACACAAGCAATCAGAAGCTATTCTGAAACCAAAGCAATAAACATGATGCTTCAATCCTaGACAACTCAAATACCAATA | + |
|
Preference number: 4 (lower is better) Translates to: YKAGTQAIRSYSETKAINMMLQS*TTQIPI Trigger: TATTGGTATTTGAGTTGTCCAGGATTGAAGCATCAT...GTTTATTGCTTTGGTTTCAGAATAGCTTCTGATTGCTTGTGTCCCAGCTTTGTA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
||
| CDS GCA 90 bp | TGTCAGTACCCGCCTCAGAGCAGATATGCCAGTATCACTCTGAAATaGTGGATGTTCGGGCAGAGAGCGACGCAAATCACGCTCAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: CQYPPQSRYASITLK*WMFGQRATQITLNF Trigger: GAAATTGAGCGTGATTTGCGTCGCTCTCTGCCCGAACATCCAGCATTTCAGAGTGATACTGGCATATCTGCTCTGAGGCGGGTACTGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
||
| CDS GCA 90 bp | ACCACTGATGTTCTTCCCTGGGAGAGGGAAGATCTTTCTTCACACTaGTCTCTGCATTCCCTTCACTGGGTCCAGAATCACGAGCTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: TTDVLPWEREDLSSH*SLHSLHWVQNHELY Trigger: GTACAGCTCGTGATTCTGGACCCAGTGAAGGGAATGCAGAGAGCAGTGTGAAGAAAGATCTTCCCTCTCCCAGGGAAGAACATCAGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
||
| CDS CCA 90 bp | CAGTACCCGCCTCAGAGCAGATATGCCAGTATCACTCTGAAATGCTaGATGTTCGGGCAGAGAGCGACGCAAATCACGCTCAATTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QYPPQSRYASITLKC*MFGQRATQITLNFF Trigger: GAAGAAATTGAGCGTGATTTGCGTCGCTCTCTGCCCGAACATCCAGCATTTCAGAGTGATACTGGCATATCTGCTCTGAGGCGGGTACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
||
| CDS TCA 90 bp | CCTGTCGAGTCAGAACTAACAGCAACCTCTGTACTAACATCATCTTaGGTTGAAGCTGCCCGGCACTTGAGCCTGAGTTTTGCCACCAGT | + |
|
Preference number: 5 (lower is better) Translates to: PVESELTATSVLTSS*VEAARHLSLSFATS Trigger: ACTGGTGGCAAAACTCAGGCTCAAGTGCCGGGCAGCTTCAACTCAAGATGATGTTAGTACAGAGGTTGCTGTTAGTTCTGACTCGACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
||
| CDS-3UTR CAA 90 bp | ATAAGTCCCTCTTCAAAAGCGGCAGAAGACAGGTCAGGTCTGCATGGATTGCTTAGGACAAAGTACTCGTaGGATCTTTCCATCAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: ISPSSKAAEDRSGLHGLLRTKYS*DLSISH Trigger: GTGGCTGATGGAAAGATCCAACGAGTACTTTGTCCT...AAGCAATCCATGCAGACCTGACCTGTCTTCTGCCGCTTTTGAAGAGGGACTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
||
| CDS-3UTR CAA 90 bp | ACAGGTCAGGTCTGCATGGATTGCTTGTTTTTGTTTGTTTGTTGTTTTGTTCTTGAAGCTGCCCGGCACTaGAGCCTGAGTTTTGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: TGQVCMDCLFLFVCCFVLEAARH*SLSFAT Trigger: GGTGGCAAAACTCAGGCTCAAGTGCCGGGCAGCTTC...AAGAACAAAACAACAAACAAACAAAAACAAGCAATCCATGCAGACCTGACCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
||
| CDS-3UTR CAA 90 bp | TCCTTTCATTGTTTCCCTTCTAGCCAAGTCAGAGGCTCGAAATCCAAGTCTAGTGCACATTCTGCTTTGTaGTCTCTTCCAGGGTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SFHCFPSSQVRGSKSKSSAHSAL*SLPGSG Trigger: TCCAGACCCTGGAAGAGACAACAAAGCAGAATGTGC...ACTAGACTTGGATTTCGAGCCTCTGACTTGGCTAGAAGGGAAACAATGAAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
||
| CDS TCA 90 bp | TCATTTAACAGGGAAGCAAGAATCTGCTCAAATGCAAACGACCACTaGTGTTCTTCCCTGGGAGAGGGAAGATCTTTCTTCACACTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SFNREARICSNANDH*CSSLGEGRSFFTLL Trigger: GAGCAGTGTGAAGAAAGATCTTCCCTCTCCCAGGGAAGAACATCAGTGGTCGTTTGCATTTGAGCAGATTCTTGCTTCCCTGTTAAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
||
| CDS GCA 90 bp | TCAGTGTTCACAGTTTTGCTGCATTCCTTTGGACATGTCAAAGGCTaGTCCTCAAAATTCTCAGATGGGCCTGTCGAGTCAGAACTAACA | + |
|
Preference number: 5 (lower is better) Translates to: SVFTVLLHSFGHVKG*SSKFSDGPVESELT Trigger: TGTTAGTTCTGACTCGACAGGCCCATCTGAGAATTTTGAGGAGCAGCCTTTGACATGTCCAAAGGAATGCAGCAAAACTGTGAACACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
||
| CDS-3UTR CAA 90 bp | GCTCAATCCCTCGAGAGCAGAGAATGCAGAAGTTGCATGTATTACTGTAAAACCAACCCTGTTGAACATTaGAAGGCAGTGGGCTATCCT | + |
|
Preference number: 5 (lower is better) Translates to: AQSLESRECRSCMYYCKTNPVEH*KAVGYP Trigger: AGGATAGCCCACTGCCTTCAAATGTTCAACAGGGTT...GGTTTTACAGTAATACATGCAACTTCTGCATTCTCTGCTCTCGAGGGATTGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
||
| CDS-3UTR CAA 90 bp | ATAAGTCCCTCTTCAAAAGCGGCAGAAGACAGGTCAGGTCTGCATGGATTGCTTATGATGACCGATCTGTaGGAGTCATCAGTTTTATCT | + |
|
Preference number: 5 (lower is better) Translates to: ISPSSKAAEDRSGLHGLLMMTDL*ESSVLS Trigger: AGATAAAACTGATGACTCCAACAGATCGGTCATCAT...AAGCAATCCATGCAGACCTGACCTGTCTTCTGCCGCTTTTGAAGAGGGACTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
||
| CDS TCA 90 bp | TGTTTGCAGAATGAGCCCAGGGACTCAGCAAGTGATATAATACTCTaGATTGCTGGCAGTCAATCTGATATTGTTCCAAATATGGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: CLQNEPRDSASDIIL*IAGSQSDIVPNMAG Trigger: GCCTGCCATATTTGGAACAATATCAGATTGACTGCCAGCAATTCAGAGTATTATATCACTTGCTGAGTCCCTGGGCTCATTCTGCAAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
||
| CDS GCA 90 bp | GAGGGTGAAATACTGTCATTAAGGCTTCAGTGTTCACAGTTTTGCTaGATTCCTTTGGACATGTCAAAGGCTGCTCCTCAAAATTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: EGEILSLRLQCSQFC*IPLDMSKAAPQNSQ Trigger: CTGAGAATTTTGAGGAGCAGCCTTTGACATGTCCAAAGGAATGCAGCAAAACTGTGAACACTGAAGCCTTAATGACAGTATTTCACCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
||
| CDS-3UTR CAA 90 bp | GTACGTTCTTGTCAAAGACTGACCATGCCAATTCTTTCCCAGAAAGGGAGACTTTCAGTGTTCACAGTTTaGCTGCATTCCTTTGGACAT | + |
|
Preference number: 5 (lower is better) Translates to: VRSCQRLTMPILSQKGRLSVFTV*LHSFGH Trigger: ATGTCCAAAGGAATGCAGCAAAACTGTGAACACTGA...AAGTCTCCCTTTCTGGGAAAGAATTGGCATGGTCAGTCTTTGACAAGAACGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS TCA 90 bp | GTTATTTCTTCTCTGTTGGCTCCACATGCAATTGACAAGTACACTTaGGAATCTGGTGTCTGGTGTAGGATGCGAAATGGAGCTACTTTA | + |
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Preference number: 5 (lower is better) Translates to: VISSLLAPHAIDKYT*ESGVWCRMRNGATL Trigger: TAAAGTAGCTCCATTTCGCATCCTACACCAGACACCAGATTCTCAAGTGTACTTGTCAATTGCATGTGGAGCCAACAGAGAAGAAATAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS GCA 90 bp | TCTCTTCCAGGGTCTGGATCACATACAACCTATTTCGACAGCGCATaGTATGTATATCTTCATAGCGGATACTACCATATTTCTCATTGG | + |
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Preference number: 5 (lower is better) Translates to: SLPGSGSHTTYFDSA*YVYLHSGYYHISHW Trigger: CCAATGAGAAATATGGTAGTATCCGCTATGAAGATATACATAGCATGCGCTGTCGAAATAGGTTGTATGTGATCCAGACCCTGGAAGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS-3UTR CAA 90 bp | TTGGTCACCATGAAGGAAGTCTATCCTTTCATTGTTTCCCTTCTAGCCAAGTCAGTTATTTCTTCTCTGTaGGCTCCACATGCAATTGAC | + |
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Preference number: 5 (lower is better) Translates to: LVTMKEVYPFIVSLLAKSVISSL*APHAID Trigger: GTCAATTGCATGTGGAGCCAACAGAGAAGAAATAAC...TGACTTGGCTAGAAGGGAAACAATGAAAGGATAGACTTCCTTCATGGTGACCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS-3UTR CAA 90 bp | GTACGTTCTTGTCAAAGACTGACCATGCCAATTCTTTCCCAGAAAGGGAGACTTAAGTCTTTTCAAGTTTaGAGATTGCATCCCAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: VRSCQRLTMPILSQKGRLKSFQV*RLHPRR Trigger: TCTCCTGGGATGCAATCTCAAAACTTGAAAAGACTT...AAGTCTCCCTTTCTGGGAAAGAATTGGCATGGTCAGTCTTTGACAAGAACGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS-3UTR CAA 90 bp | ACCACCTTTCAAAAGACCAGCAATCTCATGGAAACAGCAGGACAAACTTGTGACAAAGTAATTCTTCTGTaGAAAGCTCATCGCCCTTTG | + |
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Preference number: 5 (lower is better) Translates to: TTFQKTSNLMETAGQTCDKVILL*KAHRPL Trigger: CAAAGGGCGATGAGCTTTCAACAGAAGAATTACTTT...GTCACAAGTTTGTCCTGCTGTTTCCATGAGATTGCTGGTCTTTTGAAAGGTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS-3UTR CAA 90 bp | GCTCAATCCCTCGAGAGCAGAGAATGCAGAAGTTGCATGTATTACTGTAAAACCAAAGCTGTTTTTCCTTaGATGCTAATGATGACCGAT | + |
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Preference number: 5 (lower is better) Translates to: AQSLESRECRSCMYYCKTKAVFP*MLMMTD Trigger: ATCGGTCATCATTAGCATCAAAGGAAAAACAGCTTT...GGTTTTACAGTAATACATGCAACTTCTGCATTCTCTGCTCTCGAGGGATTGAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS-3UTR CAA 90 bp | TACAAAGCTGGGACACAAGCAATCAGAAGCTATTCTGAAACCAAAGCAATAAACTGGCTCCACATGCAATaGACAAGTACACTTGAGAAT | + |
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Preference number: 5 (lower is better) Translates to: YKAGTQAIRSYSETKAINWLHMQ*TSTLEN Trigger: ATTCTCAAGTGTACTTGTCAATTGCATGTGGAGCCA...GTTTATTGCTTTGGTTTCAGAATAGCTTCTGATTGCTTGTGTCCCAGCTTTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS-3UTR CAA 90 bp | TACAAAGCTGGGACACAAGCAATCAGAAGCTATTCTGAAACCAAAGCAATAAACGCAGTCAATCTGATATaGTTCCAAATATGGCAGGCT | + |
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Preference number: 5 (lower is better) Translates to: YKAGTQAIRSYSETKAINAVNLI*FQIWQA Trigger: AGCCTGCCATATTTGGAACAATATCAGATTGACTGC...GTTTATTGCTTTGGTTTCAGAATAGCTTCTGATTGCTTGTGTCCCAGCTTTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS-3UTR CAA 90 bp | TTGGTCACCATGAAGGAAGTCTATCCTTTCATTGTTTCCCTTCTAGCCAAGTCATTCGCATTTTCTAGCTaGGCTTTTAAATCTAAGGGT | + |
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Preference number: 5 (lower is better) Translates to: LVTMKEVYPFIVSLLAKSFAFSS*AFKSKG Trigger: ACCCTTAGATTTAAAAGCCAAGCTAGAAAATGCGAA...TGACTTGGCTAGAAGGGAAACAATGAAAGGATAGACTTCCTTCATGGTGACCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS-3UTR CAA 90 bp | ACAGGTCAGGTCTGCATGGATTGCTTGTTTTTGTTTGTTTGTTGTTTTGTTCTTGGCATAGTTTGCCAGTaGTTCCATAAGAAGGTATGT | + |
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Preference number: 5 (lower is better) Translates to: TGQVCMDCLFLFVCCFVLGIVCQ*FHKKVC Trigger: ACATACCTTCTTATGGAACAACTGGCAAACTATGCC...AAGAACAAAACAACAAACAAACAAAAACAAGCAATCCATGCAGACCTGACCTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS-3UTR CAA 90 bp | TACAAAGCTGGGACACAAGCAATCAGAAGCTATTCTGAAACCAAAGCAATAAACAAGCCTCTTCTTCTTTaGCATATAGGAGCAATACTG | + |
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Preference number: 5 (lower is better) Translates to: YKAGTQAIRSYSETKAINKPLLL*HIGAIL Trigger: CAGTATTGCTCCTATATGCAAAAGAAGAAGAGGCTT...GTTTATTGCTTTGGTTTCAGAATAGCTTCTGATTGCTTGTGTCCCAGCTTTGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS-3UTR CAA 90 bp | CAGAAGACAGGTCAGGTCTGCATGGATTGCTTGTTTTTGTTTGTTTGTTGTTTTTATTCCAAACCTCTTTaGGTAATCTGTAGAGGATCA | + |
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Preference number: 5 (lower is better) Translates to: QKTGQVCMDCLFLFVCCFYSKPL*VICRGS Trigger: TGATCCTCTACAGATTACCAAAAGAGGTTTGGAATA...AAAACAACAAACAAACAAAAACAAGCAATCCATGCAGACCTGACCTGTCTTCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS-3UTR CAA 90 bp | ACAGGTCAGGTCTGCATGGATTGCTTGTTTTTGTTTGTTTGTTGTTTTGTTCTTAGTCTTCATTATATTTaGTTCCAACCAGTCCCAATG | + |
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Preference number: 5 (lower is better) Translates to: TGQVCMDCLFLFVCCFVLSLHYI*FQPVPM Trigger: CATTGGGACTGGTTGGAACAAAATATAATGAAGACT...AAGAACAAAACAACAAACAAACAAAAACAAGCAATCCATGCAGACCTGACCTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS CAA 90 bp | CCCTGTAAGTCCCCCTCCTCCTTCTTCCCCGTAGCCTCGACGCCTTaGCAGGACAAAGTACTCGTTGGATCTTTCCATCAGCCACAGCTT | + |
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Preference number: 6 (lower is better) Translates to: PCKSPSSFFPVASTP*QDKVLVGSFHQPQL Trigger: AAGCTGTGGCTGATGGAAAGATCCAACGAGTACTTTGTCCTGCAAAGGCGTCGAGGCTACGGGGAAGAAGGAGGAGGGGGACTTACAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS CAA 72 bp | TCCCCCTCCTCCTTCTTCCCCGTAGCCTCGACGCCTTaGCAGGACAAAGTACTCGTTGGATCTTTCCATCAG | + |
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Preference number: 6 (lower is better) Translates to: SPSSFFPVASTP*QDKVLVGSFHQ Trigger: CTGATGGAAAGATCCAACGAGTACTTTGTCCTGCAAAGGCGTCGAGGCTACGGGGAAGAAGGAGGAGGGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS GCA 72 bp | CCGCCTCAGAGCAGATATGCCAGTATCACTCTGAAATaGTGGATGTTCGGGCAGAGAGCGACGCAAATCACG | + |
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Preference number: 6 (lower is better) Translates to: PPQSRYASITLK*WMFGQRATQIT Trigger: CGTGATTTGCGTCGCTCTCTGCCCGAACATCCAGCATTTCAGAGTGATACTGGCATATCTGCTCTGAGGCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS TCA 72 bp | AGTACCCGCCTCAGAGCAGATATGCCAGTATCACTCTaGAATGCTGGATGTTCGGGCAGAGAGCGACGCAAA | + |
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Preference number: 6 (lower is better) Translates to: STRLRADMPVSL*NAGCSGRERRK Trigger: TTTGCGTCGCTCTCTGCCCGAACATCCAGCATTTCAGAGTGATACTGGCATATCTGCTCTGAGGCGGGTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS CCA 72 bp | CCTCAGAGCAGATATGCCAGTATCACTCTGAAATGCTaGATGTTCGGGCAGAGAGCGACGCAAATCACGCTC | + |
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Preference number: 6 (lower is better) Translates to: PQSRYASITLKC*MFGQRATQITL Trigger: GAGCGTGATTTGCGTCGCTCTCTGCCCGAACATCCAGCATTTCAGAGTGATACTGGCATATCTGCTCTGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS CCA 72 bp | CGTAGCCTCGACGCCTTTGCAGGACAAAGTACTCGTTaGATCTTTCCATCAGCCACAGCTTCAGCGCATTTT | + |
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Preference number: 6 (lower is better) Translates to: RSLDAFAGQSTR*IFPSATASAHF Trigger: AAAATGCGCTGAAGCTGTGGCTGATGGAAAGATCCAACGAGTACTTTGTCCTGCAAAGGCGTCGAGGCTACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS GCA 72 bp | GCTGCCCGGCACTTGAGCCTGAGTTTTGCCACCAGTTaGTCAAAGTCTTTAAGCTCACTGAAACGAAAAGCT | + |
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Preference number: 6 (lower is better) Translates to: AARHLSLSFATS*SKSLSSLKRKA Trigger: AGCTTTTCGTTTCAGTGAGCTTAAAGACTTTGAGCAACTGGTGGCAAAACTCAGGCTCAAGTGCCGGGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS CCA 72 bp | GATCTTTCTTCACACTGCTCTCTGCATTCCCTTCACTaGGTCCAGAATCACGAGCTGTACTGGCTGATGATG | + |
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Preference number: 6 (lower is better) Translates to: DLSSHCSLHSLH*VQNHELYWLMM Trigger: CATCATCAGCCAGTACAGCTCGTGATTCTGGACCCAGTGAAGGGAATGCAGAGAGCAGTGTGAAGAAAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS TCA 72 bp | AGGGAAGCAAGAATCTGCTCAAATGCAAACGACCACTaGTGTTCTTCCCTGGGAGAGGGAAGATCTTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: REARICSNANDH*CSSLGEGRSFF Trigger: GAAGAAAGATCTTCCCTCTCCCAGGGAAGAACATCAGTGGTCGTTTGCATTTGAGCAGATTCTTGCTTCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS CAA 72 bp | TCACGTCTTGCGATACAACACGTAGCACATTCTGCTTaGTTGTCTCTTCCAGGGTCTGGATCACATACAACC | + |
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Preference number: 6 (lower is better) Translates to: SRLAIQHVAHSA*LSLPGSGSHTT Trigger: GGTTGTATGTGATCCAGACCCTGGAAGAGACAACAAAGCAGAATGTGCTACGTGTTGTATCGCAAGACGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS TCA 72 bp | TCTCTGTTGGCTCCACATGCAATTGACAAGTACACTTaGGAATCTGGTGTCTGGTGTAGGATGCGAAATGGA | + |
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Preference number: 6 (lower is better) Translates to: SLLAPHAIDKYT*ESGVWCRMRNG Trigger: TCCATTTCGCATCCTACACCAGACACCAGATTCTCAAGTGTACTTGTCAATTGCATGTGGAGCCAACAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS TCA 72 bp | TCAGAACTAACAGCAACCTCTGTACTAACATCATCTTaGGTTGAAGCTGCCCGGCACTTGAGCCTGAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: SELTATSVLTSS*VEAARHLSLSF Trigger: AAAACTCAGGCTCAAGTGCCGGGCAGCTTCAACTCAAGATGATGTTAGTACAGAGGTTGCTGTTAGTTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS CAA 90 bp | ATACTGTCATTAAGGCTTCAGTGTTCACAGTTTTGCTGCATTCCTTaGGACATGTCAAAGGCTGCTCCTCAAAATTCTCAGATGGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: ILSLRLQCSQFCCIP*DMSKAAPQNSQMGL Trigger: CAGGCCCATCTGAGAATTTTGAGGAGCAGCCTTTGACATGTCCAAAGGAATGCAGCAAAACTGTGAACACTGAAGCCTTAATGACAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS GCA 72 bp | ATTTTCACGTCTTGCGATACAACACGTAGCACATTCTaGTTTGTTGTCTCTTCCAGGGTCTGGATCACATAC | + |
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Preference number: 6 (lower is better) Translates to: IFTSCDTTRSTF*FVVSSRVWITY Trigger: GTATGTGATCCAGACCCTGGAAGAGACAACAAAGCAGAATGTGCTACGTGTTGTATCGCAAGACGTGAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS CAA 72 bp | ACAATCGGAATGTCCATAAAGCCAATGAGTCTCTGTTaGCAGAATGAGCCCAGGGACTCAGCAAGTGATATA | + |
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Preference number: 6 (lower is better) Translates to: TIGMSIKPMSLC*QNEPRDSASDI Trigger: TATATCACTTGCTGAGTCCCTGGGCTCATTCTGCAAACAGAGACTCATTGGCTTTATGGACATTCCGATTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS GCA 72 bp | ATACTGTCATTAAGGCTTCAGTGTTCACAGTTTTGCTaGATTCCTTTGGACATGTCAAAGGCTGCTCCTCAA | + |
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Preference number: 6 (lower is better) Translates to: ILSLRLQCSQFC*IPLDMSKAAPQ Trigger: TTGAGGAGCAGCCTTTGACATGTCCAAAGGAATGCAGCAAAACTGTGAACACTGAAGCCTTAATGACAGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS CAA 72 bp | TTAAGGCTTCAGTGTTCACAGTTTTGCTGCATTCCTTaGGACATGTCAAAGGCTGCTCCTCAAAATTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: LRLQCSQFCCIP*DMSKAAPQNSQ Trigger: CTGAGAATTTTGAGGAGCAGCCTTTGACATGTCCAAAGGAATGCAGCAAAACTGTGAACACTGAAGCCTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS GCA 72 bp | GGGTCTGGATCACATACAACCTATTTCGACAGCGCATaGTATGTATATCTTCATAGCGGATACTACCATATT | + |
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Preference number: 6 (lower is better) Translates to: GSGSHTTYFDSA*YVYLHSGYYHI Trigger: AATATGGTAGTATCCGCTATGAAGATATACATAGCATGCGCTGTCGAAATAGGTTGTATGTGATCCAGACCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS TCA 72 bp | AATGAGCCCAGGGACTCAGCAAGTGATATAATACTCTaGATTGCTGGCAGTCAATCTGATATTGTTCCAAAT | + |
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Preference number: 6 (lower is better) Translates to: NEPRDSASDIIL*IAGSQSDIVPN Trigger: ATTTGGAACAATATCAGATTGACTGCCAGCAATTCAGAGTATTATATCACTTGCTGAGTCCCTGGGCTCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS CAA 72 bp | ATACAGCAACCAGAAGCCAAAAAGCCTCTTCTTCTTTaGCATATAGGAGCAATACTGAAGTCAAAATGTTCA | + |
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Preference number: 6 (lower is better) Translates to: IQQPEAKKPLLL*HIGAILKSKCS Trigger: TGAACATTTTGACTTCAGTATTGCTCCTATATGCAAAAGAAGAAGAGGCTTTTTGGCTTCTGGTTGCTGTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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| CDS CAA 72 bp | GCTGGAGGAATATGCAGCTTAAAAAGCAGCTTGAGCTaGTCAGTAAAACTTCCATTGTACATTATATCTATT | + |
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Preference number: 6 (lower is better) Translates to: AGGICSLKSSLS*SVKLPLYIISI Trigger: AATAGATATAATGTACAATGGAAGTTTTACTGACAAGCTCAAGCTGCTTTTTAAGCTGCATATTCCTCCAGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096313.4 |
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