Pregenerated sensors for TBC1D7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021368Ensembl transcript IDs: ENSMUST00000021797.9, ENSMUST00000179852.9, ENSMUST00000220579.2, ENSMUST00000220787.2, ENSMUST00000221352.2, ENSMUST00000221795.2, ENSMUST00000222160.2, ENSMUST00000223000.2
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGGGCCTGCAGACTGCCCATGTAGTCACGAGCTGTCAGGCCGAATaGACTGGGGTCCCACAGTGTTTGTGCCACAAGTCGATGGCCTTG | + |
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Preference number: 1 (lower is better) Translates to: EGLQTAHVVTSCQAE*TGVPQCLCHKSMAL Trigger: CAAGGCCATCGACTTGTGGCACAAACACTGTGGGACCCCAGTGCATTCGGCCTGACAGCTCGTGACTACATGGGCAGTCTGCAGGCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220579.2 |
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| 3UTR GCA 90 bp | GGTAGGCCATCACCTGGGAATGAGTGTCATGGTGCGGAGGTAAGATaGCTAGAAGCGCCTTCCATACCAACGCGCGATACATGGATGGGA | + |
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Preference number: 1 (lower is better) Translates to: GRPSPGNECHGAEVR*LEAPSIPTRDTWMG Trigger: TCCCATCCATGTATCGCGCGTTGGTATGGAAGGCGCTTCTAGGCATCTTACCTCCGCACCATGACACTCATTCCCAGGTGATGGCCTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221795.2 |
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| 3UTR CCA 90 bp | CTTCCCCGATTCAAGCTGATACATGCGAAGATACACTTCAGCCTGTaGCGTGGCATCACTGATGAAGCGGACGACTGTCAGGGCATGGAG | + |
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Preference number: 1 (lower is better) Translates to: LPRFKLIHAKIHFSL*RGITDEADDCQGME Trigger: CTCCATGCCCTGACAGTCGTCCGCTTCATCAGTGATGCCACGCCACAGGCTGAAGTGTATCTTCGCATGTATCAGCTTGAATCGGGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221352.2 ENSMUST00000221795.2 |
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| 3UTR TCA 90 bp | CTGCTTCTCTCACTGGGAATTTGTTCCACTCCCAGGAGGCACGCGTaGGCAATGGGCTTGCATGCAGACCAAGATCCCCAAAAGAGAAGA | + |
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Preference number: 1 (lower is better) Translates to: LLLSLGICSTPRRHA*AMGLHADQDPQKRR Trigger: TCTTCTCTTTTGGGGATCTTGGTCTGCATGCAAGCCCATTGCTCACGCGTGCCTCCTGGGAGTGGAACAAATTCCCAGTGAGAGAAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223000.2 |
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| 3UTR TCA 90 bp | TCCAGAGGAAAAGAGGGACTTCGAGGTAGCTTCCCCGATTCAAGCTaGTACATGCGAAGATACACTTCAGCCTGTGGCGTGGCATCACTG | + |
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Preference number: 1 (lower is better) Translates to: SRGKEGLRGSFPDSS*YMRRYTSACGVASL Trigger: CAGTGATGCCACGCCACAGGCTGAAGTGTATCTTCGCATGTATCAGCTTGAATCGGGGAAGCTACCTCGAAGTCCCTCTTTTCCTCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000221352.2 ENSMUST00000221795.2 |
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| 3UTR CCA 90 bp | CAGGAGGCTGAGGCAGGAGGATTACCAAAAACTGGATGCCAGTATTaGGAGGGTATAGAGAGTTCCAGGCCAACACGAGTTACAGCACAG | + |
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Preference number: 1 (lower is better) Translates to: QEAEAGGLPKTGCQY*EGIESSRPTRVTAQ Trigger: CTGTGCTGTAACTCGTGTTGGCCTGGAACTCTCTATACCCTCCCAATACTGGCATCCAGTTTTTGGTAATCCTCCTGCCTCAGCCTCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223000.2 |
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| 3UTR TCA 90 bp | AAGCGTCCCTGTACTTGTTATTTAACTGCTTCACGAAGCATCGGCTaGTCCAGTAACAGTCCACACTGTCTTCCACCATCTCTTCCATGG | + |
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Preference number: 1 (lower is better) Translates to: KRPCTCYLTASRSIG*SSNSPHCLPPSLPW Trigger: CCATGGAAGAGATGGTGGAAGACAGTGTGGACTGTTACTGGATCAGCCGATGCTTCGTGAAGCAGTTAAATAACAAGTACAGGGACGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221352.2 ENSMUST00000221795.2 |
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| 3UTR CCA 90 bp | TCAGCAGCCTACTGTCTTCCAGATTCAAGTACTGCTCGAAAGCCTTaGGCAGCTGAGGTAAAGCGTCCCTGTACTTGTTATTTAACTGCT | + |
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Preference number: 1 (lower is better) Translates to: SAAYCLPDSSTARKP*AAEVKRPCTCYLTA Trigger: AGCAGTTAAATAACAAGTACAGGGACGCTTTACCTCAGCTGCCCAAGGCTTTCGAGCAGTACTTGAATCTGGAAGACAGTAGGCTGCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221352.2 ENSMUST00000221795.2 |
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| 3UTR TCA 90 bp | CTACTGTCTTCCAGATTCAAGTACTGCTCGAAAGCCTTGGGCAGCTaGGGTAAAGCGTCCCTGTACTTGTTATTTAACTGCTTCACGAAG | + |
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Preference number: 1 (lower is better) Translates to: LLSSRFKYCSKALGS*GKASLYLLFNCFTK Trigger: CTTCGTGAAGCAGTTAAATAACAAGTACAGGGACGCTTTACCTCAGCTGCCCAAGGCTTTCGAGCAGTACTTGAATCTGGAAGACAGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221352.2 ENSMUST00000221795.2 |
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| 3UTR-3UTR GCA 90 bp | GATGTGAACGAAGTGCTCAGGGAGGGCCTGCAGACTGCCCATGTAGTCACGAGCGTCCCACAGTGTTTGTaGCACAAGTCGATGGCCTTG | + |
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Preference number: 2 (lower is better) Translates to: DVNEVLREGLQTAHVVTSVPQCL*HKSMAL Trigger: CAAGGCCATCGACTTGTGGCACAAACACTGTGGGAC...GCTCGTGACTACATGGGCAGTCTGCAGGCCCTCCCTGAGCACTTCGTTCACATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220579.2 |
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| 3UTR-3UTR TCA 90 bp | TTATCCCAGACCCTCTGTAAACTGGACTCGGGGAGGCATCCCGCGAAGCACCTTTCACGAAGCATCGGCTaGTCCAGTAACAGTCCACAC | + |
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Preference number: 2 (lower is better) Translates to: LSQTLCKLDSGRHPAKHLSRSIG*SSNSPH Trigger: GTGTGGACTGTTACTGGATCAGCCGATGCTTCGTGA...AAGGTGCTTCGCGGGATGCCTCCCCGAGTCCAGTTTACAGAGGGTCTGGGATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221352.2 |
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| 3UTR-3UTR CCA 90 bp | GGGAATGAGTGTCATGGTGCGGAGGTAAGATGCCTAGAAGCGCCTTCCATACCACGCGCGATACATGGATaGGAGAGGGAACCTCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: GNECHGAEVRCLEAPSIPRAIHG*EREPLA Trigger: AGCCAGAGGTTCCCTCTCCCATCCATGTATCGCGCG...TGGTATGGAAGGCGCTTCTAGGCATCTTACCTCCGCACCATGACACTCATTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221795.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTCCATGGCCTTGGCGATGGCAAGAAAGACTTCATCCTCCGGCTCCAGAGGACCAACGCGCGATACATaGATGGGAGAGGGAACCTCT | + |
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Preference number: 2 (lower is better) Translates to: SSMALAMARKTSSSGSRGPTRDT*MGEGTS Trigger: AGAGGTTCCCTCTCCCATCCATGTATCGCGCGTTGG...TCCTCTGGAGCCGGAGGATGAAGTCTTTCTTGCCATCGCCAAGGCCATGGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221795.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGGTGACTCAGCAGCCTACTGTCTTCCAGATTCAAGTACTGCTCGAAAGCCTGCCATCACCTGGGAATaGGTGTCATGGTGCGGAGGT | + |
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Preference number: 2 (lower is better) Translates to: SGDSAAYCLPDSSTARKPAITWE*VSWCGG Trigger: ACCTCCGCACCATGACACTCATTCCCAGGTGATGGC...AGGCTTTCGAGCAGTACTTGAATCTGGAAGACAGTAGGCTGCTGAGTCACCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221795.2 |
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| 3UTR-3UTR CCA 90 bp | GATGGCAAGAAAGACTTCATCCTCCGGCTCCAGAGGAAAAGAGGGACTTCGAGGGGGAGAGGGAACCTCTaGCTAAATGTGCAAAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: DGKKDFILRLQRKRGTSRGRGNL*LNVQSF Trigger: GAAGCTTTGCACATTTAGCCAGAGGTTCCCTCTCCC...CCTCGAAGTCCCTCTTTTCCTCTGGAGCCGGAGGATGAAGTCTTTCTTGCCATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221795.2 |
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| 3UTR-3UTR CCA 90 bp | GGAACCAGAGGTCGTAAGGCAGTTTGGACACTGCAGAACACGTCTTCAGGTGACATACACTTCAGCCTGTaGCGTGGCATCACTGATGAA | + |
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Preference number: 2 (lower is better) Translates to: GTRGRKAVWTLQNTSSGDIHFSL*RGITDE Trigger: TTCATCAGTGATGCCACGCCACAGGCTGAAGTGTAT...GTCACCTGAAGACGTGTTCTGCAGTGTCCAAACTGCCTTACGACCTCTGGTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221352.2 ENSMUST00000221795.2 |
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| 3UTR CAA 90 bp | AAAAGAGAAGAGGGGGACTATTTCTCCTTGCCAGGAGTGGGACACTaGACTATAATAATCCTAGCGCTCAGGAGGCTGAGGCAGGAGGAT | + |
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Preference number: 2 (lower is better) Translates to: KREEGDYFSLPGVGH*TIIILALRRLRQED Trigger: ATCCTCCTGCCTCAGCCTCCTGAGCGCTAGGATTATTATAGTCAAGTGTCCCACTCCTGGCAAGGAGAAATAGTCCCCCTCTTCTCTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223000.2 |
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| 3UTR-3UTR CCA 90 bp | GACTCAGCAGCCTACTGTCTTCCAGATTCAAGTACTGCTCGAAAGCCTTGGGCAATACACTTCAGCCTGTaGCGTGGCATCACTGATGAA | + |
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Preference number: 2 (lower is better) Translates to: DSAAYCLPDSSTARKPWAIHFSL*RGITDE Trigger: TTCATCAGTGATGCCACGCCACAGGCTGAAGTGTAT...TGCCCAAGGCTTTCGAGCAGTACTTGAATCTGGAAGACAGTAGGCTGCTGAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221352.2 ENSMUST00000221795.2 |
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| 3UTR-3UTR CCA 90 bp | GTGACTCAGCAGCCTACTGTCTTCCAGATTCAAGTACTGCTCGAAAGCCTTGGGTCTCTTCCATGGCCTTaGCGATGGCAAGAAAGACTT | + |
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Preference number: 2 (lower is better) Translates to: VTQQPTVFQIQVLLESLGSLPWP*RWQERL Trigger: AAGTCTTTCTTGCCATCGCCAAGGCCATGGAAGAGA...CCCAAGGCTTTCGAGCAGTACTTGAATCTGGAAGACAGTAGGCTGCTGAGTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221352.2 ENSMUST00000221795.2 |
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| 3UTR-3UTR GCA 90 bp | CTCAGCAGCCTACTGTCTTCCAGATTCAAGTACTGCTCGAAAGCCTTGGGCAGCTACTTGTTATTTAACTaGTTCACGAAGCATCGGCTG | + |
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Preference number: 2 (lower is better) Translates to: LSSLLSSRFKYCSKALGSYLLFN*FTKHRL Trigger: CAGCCGATGCTTCGTGAAGCAGTTAAATAACAAGTA...GCTGCCCAAGGCTTTCGAGCAGTACTTGAATCTGGAAGACAGTAGGCTGCTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221352.2 ENSMUST00000221795.2 |
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| 3UTR-3UTR GCA 90 bp | GTAAGGCAGTTTGGACACTGCAGAACACGTCTTCAGGTGACTCAGCAGCCTACTATTCAAGCTGATACATaGGAAGATACACTTCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: VRQFGHCRTRLQVTQQPTIQADT*EDTLQP Trigger: AGGCTGAAGTGTATCTTCGCATGTATCAGCTTGAAT...AGTAGGCTGCTGAGTCACCTGAAGACGTGTTCTGCAGTGTCCAAACTGCCTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221352.2 ENSMUST00000221795.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGGTGACTCAGCAGCCTACTGTCTTCCAGATTCAAGTACTGCTCGAAAGCCTATTCAAGCTGATACATaGGAAGATACACTTCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: SGDSAAYCLPDSSTARKPIQADT*EDTLQP Trigger: AGGCTGAAGTGTATCTTCGCATGTATCAGCTTGAAT...AGGCTTTCGAGCAGTACTTGAATCTGGAAGACAGTAGGCTGCTGAGTCACCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221352.2 ENSMUST00000221795.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGGTGACTCAGCAGCCTACTGTCTTCCAGATTCAAGTACTGCTCGAAAGCCTTACTTGTTATTTAACTaGTTCACGAAGCATCGGCTG | + |
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Preference number: 2 (lower is better) Translates to: SGDSAAYCLPDSSTARKPYLLFN*FTKHRL Trigger: CAGCCGATGCTTCGTGAAGCAGTTAAATAACAAGTA...AGGCTTTCGAGCAGTACTTGAATCTGGAAGACAGTAGGCTGCTGAGTCACCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221352.2 ENSMUST00000221795.2 |
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| 3UTR GCA 72 bp | CAGACTGCCCATGTAGTCACGAGCTGTCAGGCCGAATaGACTGGGGTCCCACAGTGTTTGTGCCACAAGTCG | + |
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Preference number: 3 (lower is better) Translates to: QTAHVVTSCQAE*TGVPQCLCHKS Trigger: CGACTTGTGGCACAAACACTGTGGGACCCCAGTGCATTCGGCCTGACAGCTCGTGACTACATGGGCAGTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220579.2 |
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| 3UTR GCA 72 bp | GTTCCACTCCCAGGAGGCACGCGTGAGCAATGGGCTTaGATGCAGACCAAGATCCCCAAAAGAGAAGAGGGG | + |
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Preference number: 3 (lower is better) Translates to: VPLPGGTREQWA*MQTKIPKREEG Trigger: CCCCTCTTCTCTTTTGGGGATCTTGGTCTGCATGCAAGCCCATTGCTCACGCGTGCCTCCTGGGAGTGGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223000.2 |
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| 3UTR CCA 72 bp | TGCCCATGTAGTCACGAGCTGTCAGGCCGAATGCACTaGGGTCCCACAGTGTTTGTGCCACAAGTCGATGGC | + |
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Preference number: 3 (lower is better) Translates to: CPCSHELSGRMH*GPTVFVPQVDG Trigger: GCCATCGACTTGTGGCACAAACACTGTGGGACCCCAGTGCATTCGGCCTGACAGCTCGTGACTACATGGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220579.2 |
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| 3UTR GCA 72 bp | CCCGCTATTCCCGCTATTCCCGCTGCTTCTGGTCCCTaGTTCTCTCACTGGGAATTTGTTCCACTCCCAGGA | + |
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Preference number: 3 (lower is better) Translates to: PAIPAIPAASGP*FSHWEFVPLPG Trigger: TCCTGGGAGTGGAACAAATTCCCAGTGAGAGAAGCAGGGACCAGAAGCAGCGGGAATAGCGGGAATAGCGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223000.2 |
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| 3UTR TCA 72 bp | TCACTGGGAATTTGTTCCACTCCCAGGAGGCACGCGTaGGCAATGGGCTTGCATGCAGACCAAGATCCCCAA | + |
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Preference number: 3 (lower is better) Translates to: SLGICSTPRRHA*AMGLHADQDPQ Trigger: TTGGGGATCTTGGTCTGCATGCAAGCCCATTGCTCACGCGTGCCTCCTGGGAGTGGAACAAATTCCCAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223000.2 |
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| 3UTR GCA 72 bp | TCACCTGGGAATGAGTGTCATGGTGCGGAGGTAAGATaGCTAGAAGCGCCTTCCATACCAACGCGCGATACA | + |
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Preference number: 3 (lower is better) Translates to: SPGNECHGAEVR*LEAPSIPTRDT Trigger: TGTATCGCGCGTTGGTATGGAAGGCGCTTCTAGGCATCTTACCTCCGCACCATGACACTCATTCCCAGGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221795.2 |
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| 3UTR TCA 72 bp | ACTATTGTTTCTAACCAGTTGGTAGAGCAGGTGATGTaGACGAAGTGCTCAGGGAGGGCCTGCAGACTGCCC | + |
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Preference number: 3 (lower is better) Translates to: TIVSNQLVEQVM*TKCSGRACRLP Trigger: GGGCAGTCTGCAGGCCCTCCCTGAGCACTTCGTTCACATCACCTGCTCTACCAACTGGTTAGAAACAATAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 ENSMUST00000220579.2 |
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| 3UTR GCA 72 bp | CAGGAGGCTGAGGCAGGAGGATTACCAAAAACTGGATaGCAGTATTGGGAGGGTATAGAGAGTTCCAGGCCA | + |
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Preference number: 3 (lower is better) Translates to: QEAEAGGLPKTG*QYWEGIESSRP Trigger: TGGCCTGGAACTCTCTATACCCTCCCAATACTGGCATCCAGTTTTTGGTAATCCTCCTGCCTCAGCCTCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223000.2 |
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| 3UTR GCA 72 bp | GACTTCGAGGTAGCTTCCCCGATTCAAGCTGATACATaGGAAGATACACTTCAGCCTGTGGCGTGGCATCAC | + |
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Preference number: 3 (lower is better) Translates to: DFEVASPIQADT*EDTLQPVAWHH Trigger: GTGATGCCACGCCACAGGCTGAAGTGTATCTTCGCATGTATCAGCTTGAATCGGGGAAGCTACCTCGAAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221352.2 ENSMUST00000221795.2 |
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| 3UTR TCA 72 bp | AAAGAGGGACTTCGAGGTAGCTTCCCCGATTCAAGCTaGTACATGCGAAGATACACTTCAGCCTGTGGCGTG | + |
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Preference number: 3 (lower is better) Translates to: KEGLRGSFPDSS*YMRRYTSACGV Trigger: CACGCCACAGGCTGAAGTGTATCTTCGCATGTATCAGCTTGAATCGGGGAAGCTACCTCGAAGTCCCTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221352.2 ENSMUST00000221795.2 |
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| 3UTR CCA 72 bp | TTCAAGCTGATACATGCGAAGATACACTTCAGCCTGTaGCGTGGCATCACTGATGAAGCGGACGACTGTCAG | + |
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Preference number: 3 (lower is better) Translates to: FKLIHAKIHFSL*RGITDEADDCQ Trigger: CTGACAGTCGTCCGCTTCATCAGTGATGCCACGCCACAGGCTGAAGTGTATCTTCGCATGTATCAGCTTGAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221352.2 ENSMUST00000221795.2 |
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| 3UTR CCA 72 bp | GAGGCAGGAGGATTACCAAAAACTGGATGCCAGTATTaGGAGGGTATAGAGAGTTCCAGGCCAACACGAGTT | + |
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Preference number: 3 (lower is better) Translates to: EAGGLPKTGCQY*EGIESSRPTRV Trigger: AACTCGTGTTGGCCTGGAACTCTCTATACCCTCCCAATACTGGCATCCAGTTTTTGGTAATCCTCCTGCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223000.2 |
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| 3UTR CCA 72 bp | TACTGTCTTCCAGATTCAAGTACTGCTCGAAAGCCTTaGGCAGCTGAGGTAAAGCGTCCCTGTACTTGTTAT | + |
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Preference number: 3 (lower is better) Translates to: YCLPDSSTARKP*AAEVKRPCTCY Trigger: ATAACAAGTACAGGGACGCTTTACCTCAGCTGCCCAAGGCTTTCGAGCAGTACTTGAATCTGGAAGACAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221352.2 ENSMUST00000221795.2 |
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| 3UTR TCA 72 bp | TGTACTTGTTATTTAACTGCTTCACGAAGCATCGGCTaGTCCAGTAACAGTCCACACTGTCTTCCACCATCT | + |
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Preference number: 3 (lower is better) Translates to: CTCYLTASRSIG*SSNSPHCLPPS Trigger: AGATGGTGGAAGACAGTGTGGACTGTTACTGGATCAGCCGATGCTTCGTGAAGCAGTTAAATAACAAGTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221352.2 ENSMUST00000221795.2 |
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| CDS-3UTR CCA 90 bp | CGAAGTGCTCAGGGAGGGCCTGCAGACTGCCCATGTAGTCACGAGCTGTCAGGCGGAATCTCTGTAAACTaGACTCGGGGAGGCATCCCG | + |
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Preference number: 4 (lower is better) Translates to: RSAQGGPADCPCSHELSGGISVN*TRGGIP Trigger: CGGGATGCCTCCCCGAGTCCAGTTTACAGAGATTCC...GCCTGACAGCTCGTGACTACATGGGCAGTCTGCAGGCCCTCCCTGAGCACTTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220579.2 |
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| 3UTR CAA 72 bp | CCGCTGCTTCTGGTCCCTGCTTCTCTCACTGGGAATTaGTTCCACTCCCAGGAGGCACGCGTGAGCAATGGG | + |
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Preference number: 4 (lower is better) Translates to: PLLLVPASLTGN*FHSQEARVSNG Trigger: CCCATTGCTCACGCGTGCCTCCTGGGAGTGGAACAAATTCCCAGTGAGAGAAGCAGGGACCAGAAGCAGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223000.2 |
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| CDS-3UTR TCA 90 bp | GATGTGAACGAAGTGCTCAGGGAGGGCCTGCAGACTGCCCATGTAGTCACGAGCGCCATCACCTGGGAATaGGTGTCATGGTGCGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: DVNEVLREGLQTAHVVTSAITWE*VSWCGG Trigger: ACCTCCGCACCATGACACTCATTCCCAGGTGATGGC...GCTCGTGACTACATGGGCAGTCTGCAGGCCCTCCCTGAGCACTTCGTTCACATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 |
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| CDS-3UTR CCA 90 bp | GATGTGAACGAAGTGCTCAGGGAGGGCCTGCAGACTGCCCATGTAGTCACGAGCCGCGCGATACATGGATaGGAGAGGGAACCTCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: DVNEVLREGLQTAHVVTSRAIHG*EREPLA Trigger: AGCCAGAGGTTCCCTCTCCCATCCATGTATCGCGCG...GCTCGTGACTACATGGGCAGTCTGCAGGCCCTCCCTGAGCACTTCGTTCACATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 |
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| CDS-3UTR CCA 90 bp | GCAGGTGATGTGAACGAAGTGCTCAGGGAGGGCCTGCAGACTGCCCATGTAGTCAGACCCTCTGTAAACTaGACTCGGGGAGGCATCCCG | + |
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Preference number: 4 (lower is better) Translates to: AGDVNEVLREGLQTAHVVRPSVN*TRGGIP Trigger: CGGGATGCCTCCCCGAGTCCAGTTTACAGAGGGTCT...GACTACATGGGCAGTCTGCAGGCCCTCCCTGAGCACTTCGTTCACATCACCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 |
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| CDS-3UTR CCA 90 bp | GATGTGAACGAAGTGCTCAGGGAGGGCCTGCAGACTGCCCATGTAGTCACGAGCAGACCCTCTGTAAACTaGACTCGGGGAGGCATCCCG | + |
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Preference number: 4 (lower is better) Translates to: DVNEVLREGLQTAHVVTSRPSVN*TRGGIP Trigger: CGGGATGCCTCCCCGAGTCCAGTTTACAGAGGGTCT...GCTCGTGACTACATGGGCAGTCTGCAGGCCCTCCCTGAGCACTTCGTTCACATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 |
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| CDS-3UTR CCA 90 bp | AGAGCAGGTGATGTGAACGAAGTGCTCAGGGAGGGCCTGCAGACTGCCCATGTACGCGCGATACATGGATaGGAGAGGGAACCTCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: RAGDVNEVLREGLQTAHVRAIHG*EREPLA Trigger: AGCCAGAGGTTCCCTCTCCCATCCATGTATCGCGCG...TACATGGGCAGTCTGCAGGCCCTCCCTGAGCACTTCGTTCACATCACCTGCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 |
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| CDS-3UTR CCA 90 bp | ACTTTATCCCAGACCCTCTGTAAACTGGACTCGGGGAGGCATCCCGCGAAGCACCGCGCGATACATGGATaGGAGAGGGAACCTCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: TLSQTLCKLDSGRHPAKHRAIHG*EREPLA Trigger: AGCCAGAGGTTCCCTCTCCCATCCATGTATCGCGCG...GTGCTTCGCGGGATGCCTCCCCGAGTCCAGTTTACAGAGGGTCTGGGATAAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221352.2 |
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| CDS-3UTR CCA 90 bp | GGTAGAGCAGGTGATGTGAACGAAGTGCTCAGGGAGGGCCTGCAGACTGCCCATCCAACGCGCGATACATaGATGGGAGAGGGAACCTCT | + |
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Preference number: 4 (lower is better) Translates to: GRAGDVNEVLREGLQTAHPTRDT*MGEGTS Trigger: AGAGGTTCCCTCTCCCATCCATGTATCGCGCGTTGG...ATGGGCAGTCTGCAGGCCCTCCCTGAGCACTTCGTTCACATCACCTGCTCTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 |
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| CDS-3UTR CCA 90 bp | GCAGGTGATGTGAACGAAGTGCTCAGGGAGGGCCTGCAGACTGCCCATGTAGTCCCAACGCGCGATACATaGATGGGAGAGGGAACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AGDVNEVLREGLQTAHVVPTRDT*MGEGTS Trigger: AGAGGTTCCCTCTCCCATCCATGTATCGCGCGTTGG...GACTACATGGGCAGTCTGCAGGCCCTCCCTGAGCACTTCGTTCACATCACCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 |
||
| CDS-3UTR CCA 90 bp | CCCGCTGCTTCTGGTCCCTGCTTCTCTCACTGGGAATTTGTTCCACTCCCAGGAAGACCCTCTGTAAACTaGACTCGGGGAGGCATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PAASGPCFSHWEFVPLPGRPSVN*TRGGIP Trigger: CGGGATGCCTCCCCGAGTCCAGTTTACAGAGGGTCT...TCCTGGGAGTGGAACAAATTCCCAGTGAGAGAAGCAGGGACCAGAAGCAGCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223000.2 |
||
| CDS-3UTR CCA 90 bp | GGTAGAGCAGGTGATGTGAACGAAGTGCTCAGGGAGGGCCTGCAGACTGCCCATTGGCCTTGCTCACGATaGCATCTGAGCTGTCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GRAGDVNEVLREGLQTAHWPCSR*HLSCPE Trigger: CTCAGGACAGCTCAGATGCCATCGTGAGCAAGGCCA...ATGGGCAGTCTGCAGGCCCTCCCTGAGCACTTCGTTCACATCACCTGCTCTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 |
||
| CDS-3UTR CCA 90 bp | GATGTGAACGAAGTGCTCAGGGAGGGCCTGCAGACTGCCCATGTAGTCACGAGCTGGCCTTGCTCACGATaGCATCTGAGCTGTCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DVNEVLREGLQTAHVVTSWPCSR*HLSCPE Trigger: CTCAGGACAGCTCAGATGCCATCGTGAGCAAGGCCA...GCTCGTGACTACATGGGCAGTCTGCAGGCCCTCCCTGAGCACTTCGTTCACATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 |
||
| CDS-3UTR CCA 90 bp | GCAGGTGATGTGAACGAAGTGCTCAGGGAGGGCCTGCAGACTGCCCATGTAGTCTCAGGCCGAATGCACTaGGGTCCCACAGTGTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AGDVNEVLREGLQTAHVVSGRMH*GPTVFV Trigger: CACAAACACTGTGGGACCCCAGTGCATTCGGCCTGA...GACTACATGGGCAGTCTGCAGGCCCTCCCTGAGCACTTCGTTCACATCACCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 |
||
| CDS-3UTR CCA 90 bp | GATGTGAACGAAGTGCTCAGGGAGGGCCTGCAGACTGCCCATGTAGTCACGAGCTCAGGCCGAATGCACTaGGGTCCCACAGTGTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: DVNEVLREGLQTAHVVTSSGRMH*GPTVFV Trigger: CACAAACACTGTGGGACCCCAGTGCATTCGGCCTGA...GCTCGTGACTACATGGGCAGTCTGCAGGCCCTCCCTGAGCACTTCGTTCACATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 |
||
| CDS-3UTR TCA 90 bp | GCAGGTGATGTGAACGAAGTGCTCAGGGAGGGCCTGCAGACTGCCCATGTAGTCTCACGAAGCATCGGCTaGTCCAGTAACAGTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: AGDVNEVLREGLQTAHVVSRSIG*SSNSPH Trigger: GTGTGGACTGTTACTGGATCAGCCGATGCTTCGTGA...GACTACATGGGCAGTCTGCAGGCCCTCCCTGAGCACTTCGTTCACATCACCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 |
||
| CDS-3UTR TCA 90 bp | GGTAGAGCAGGTGATGTGAACGAAGTGCTCAGGGAGGGCCTGCAGACTGCCCATTCACGAAGCATCGGCTaGTCCAGTAACAGTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: GRAGDVNEVLREGLQTAHSRSIG*SSNSPH Trigger: GTGTGGACTGTTACTGGATCAGCCGATGCTTCGTGA...ATGGGCAGTCTGCAGGCCCTCCCTGAGCACTTCGTTCACATCACCTGCTCTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 |
||
| CDS-3UTR CCA 90 bp | GGTAGAGCAGGTGATGTGAACGAAGTGCTCAGGGAGGGCCTGCAGACTGCCCATTGTGCCACAAGTCGATaGCCTTGCTCACGATGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GRAGDVNEVLREGLQTAHCATSR*PCSRWH Trigger: ATGCCATCGTGAGCAAGGCCATCGACTTGTGGCACA...ATGGGCAGTCTGCAGGCCCTCCCTGAGCACTTCGTTCACATCACCTGCTCTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 |
||
| CDS-3UTR TCA 90 bp | GGTAGAGCAGGTGATGTGAACGAAGTGCTCAGGGAGGGCCTGCAGACTGCCCATGCTCACGATGGCATCTaGGCTGTCCTGAGGAATATT | + |
|
Preference number: 4 (lower is better) Translates to: GRAGDVNEVLREGLQTAHAHDGI*AVLRNI Trigger: AATATTCCTCAGGACAGCTCAGATGCCATCGTGAGC...ATGGGCAGTCTGCAGGCCCTCCCTGAGCACTTCGTTCACATCACCTGCTCTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 |
||
| CDS-3UTR TCA 90 bp | CAGGCCGAATGCACTGGGGTCCCACAGTGTTTGTGCCACAAGTCGATGGCCTTGGCATCTGAGCTGTCCTaGGGAATCTCTGTAAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: QAECTGVPQCLCHKSMALASELS*GISVNW Trigger: CCAGTTTACAGAGATTCCTCAGGACAGCTCAGATGC...CAAGGCCATCGACTTGTGGCACAAACACTGTGGGACCCCAGTGCATTCGGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220579.2 |
||
| CDS-3UTR GCA 90 bp | AGAGCAGGTGATGTGAACGAAGTGCTCAGGGAGGGCCTGCAGACTGCCCATGTAGTCCCACAGTGTTTGTaGCACAAGTCGATGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RAGDVNEVLREGLQTAHVVPQCL*HKSMAL Trigger: CAAGGCCATCGACTTGTGGCACAAACACTGTGGGAC...TACATGGGCAGTCTGCAGGCCCTCCCTGAGCACTTCGTTCACATCACCTGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 |
||
| CDS-3UTR CCA 90 bp | GGTAGAGCAGGTGATGTGAACGAAGTGCTCAGGGAGGGCCTGCAGACTGCCCATGGGAGAGGGAACCTCTaGCTAAATGTGCAAAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GRAGDVNEVLREGLQTAHGRGNL*LNVQSF Trigger: GAAGCTTTGCACATTTAGCCAGAGGTTCCCTCTCCC...ATGGGCAGTCTGCAGGCCCTCCCTGAGCACTTCGTTCACATCACCTGCTCTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 |
||
| CDS-3UTR CCA 90 bp | AGAGCAGGTGATGTGAACGAAGTGCTCAGGGAGGGCCTGCAGACTGCCCATGTATGTGCCACAAGTCGATaGCCTTGCTCACGATGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RAGDVNEVLREGLQTAHVCATSR*PCSRWH Trigger: ATGCCATCGTGAGCAAGGCCATCGACTTGTGGCACA...TACATGGGCAGTCTGCAGGCCCTCCCTGAGCACTTCGTTCACATCACCTGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 |
||
| CDS-3UTR TCA 90 bp | GGTAGAGCAGGTGATGTGAACGAAGTGCTCAGGGAGGGCCTGCAGACTGCCCATGCATCTGAGCTGTCCTaGGGAATATTTTCCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GRAGDVNEVLREGLQTAHASELS*GIFSRN Trigger: GTTCCTGGAAAATATTCCTCAGGACAGCTCAGATGC...ATGGGCAGTCTGCAGGCCCTCCCTGAGCACTTCGTTCACATCACCTGCTCTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 |
||
| CDS-3UTR TCA 90 bp | AGAGCAGGTGATGTGAACGAAGTGCTCAGGGAGGGCCTGCAGACTGCCCATGTAGCTCACGATGGCATCTaGGCTGTCCTGAGGAATATT | + |
|
Preference number: 4 (lower is better) Translates to: RAGDVNEVLREGLQTAHVAHDGI*AVLRNI Trigger: AATATTCCTCAGGACAGCTCAGATGCCATCGTGAGC...TACATGGGCAGTCTGCAGGCCCTCCCTGAGCACTTCGTTCACATCACCTGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 |
||
| CDS-3UTR CCA 90 bp | GCAGGTGATGTGAACGAAGTGCTCAGGGAGGGCCTGCAGACTGCCCATGTAGTCATACACTTCAGCCTGTaGCGTGGCATCACTGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: AGDVNEVLREGLQTAHVVIHFSL*RGITDE Trigger: TTCATCAGTGATGCCACGCCACAGGCTGAAGTGTAT...GACTACATGGGCAGTCTGCAGGCCCTCCCTGAGCACTTCGTTCACATCACCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 |
||
| CDS-3UTR CCA 90 bp | GGTAGAGCAGGTGATGTGAACGAAGTGCTCAGGGAGGGCCTGCAGACTGCCCATATACACTTCAGCCTGTaGCGTGGCATCACTGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: GRAGDVNEVLREGLQTAHIHFSL*RGITDE Trigger: TTCATCAGTGATGCCACGCCACAGGCTGAAGTGTAT...ATGGGCAGTCTGCAGGCCCTCCCTGAGCACTTCGTTCACATCACCTGCTCTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 |
||
| CDS-3UTR CCA 90 bp | GGTAGAGCAGGTGATGTGAACGAAGTGCTCAGGGAGGGCCTGCAGACTGCCCATTCTCTTCCATGGCCTTaGCGATGGCAAGAAAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: GRAGDVNEVLREGLQTAHSLPWP*RWQERL Trigger: AAGTCTTTCTTGCCATCGCCAAGGCCATGGAAGAGA...ATGGGCAGTCTGCAGGCCCTCCCTGAGCACTTCGTTCACATCACCTGCTCTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 |
||
| CDS-3UTR CCA 90 bp | GATGTGAACGAAGTGCTCAGGGAGGGCCTGCAGACTGCCCATGTAGTCACGAGCTCTCTTCCATGGCCTTaGCGATGGCAAGAAAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: DVNEVLREGLQTAHVVTSSLPWP*RWQERL Trigger: AAGTCTTTCTTGCCATCGCCAAGGCCATGGAAGAGA...GCTCGTGACTACATGGGCAGTCTGCAGGCCCTCCCTGAGCACTTCGTTCACATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 |
||
| 3UTR CAA 72 bp | CCTCTGGCTAAATGTGCAAAGCTTCTCGATGTAGAATaGGGTGGGGACACCGTGCGGCTCAGTGGTAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PLAKCAKLLDVE*GGDTVRLSGRA Trigger: TGCTCTACCACTGAGCCGCACGGTGTCCCCACCCAATTCTACATCGAGAAGCTTTGCACATTTAGCCAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221795.2 |
||
| CDS-3UTR TCA 90 bp | GATGTGAACGAAGTGCTCAGGGAGGGCCTGCAGACTGCCCATGTAGTCACGAGCCAGGAGGATTTCCAGTaGTTTCTTTTCTTCGACACC | + |
|
Preference number: 4 (lower is better) Translates to: DVNEVLREGLQTAHVVTSQEDFQ*FLFFDT Trigger: GGTGTCGAAGAAAAGAAATCACTGGAAATCCTCCTG...GCTCGTGACTACATGGGCAGTCTGCAGGCCCTCCCTGAGCACTTCGTTCACATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 |
||
| CDS-3UTR TCA 90 bp | AGCCTGTGGCGTGGCATCACTGATGAAGCGGACGACTGTCAGGGCATGGAGGATCAGGAGGATTTCCAGTaGTTTCTTTTCTTCGACACC | + |
|
Preference number: 4 (lower is better) Translates to: SLWRGITDEADDCQGMEDQEDFQ*FLFFDT Trigger: GGTGTCGAAGAAAAGAAATCACTGGAAATCCTCCTG...ATCCTCCATGCCCTGACAGTCGTCCGCTTCATCAGTGATGCCACGCCACAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221352.2 ENSMUST00000221795.2 |
||
| CDS-3UTR TCA 90 bp | AGAGCAGGTGATGTGAACGAAGTGCTCAGGGAGGGCCTGCAGACTGCCCATGTAGCATCTGAGCTGTCCTaGGGAATATTTTCCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RAGDVNEVLREGLQTAHVASELS*GIFSRN Trigger: GTTCCTGGAAAATATTCCTCAGGACAGCTCAGATGC...TACATGGGCAGTCTGCAGGCCCTCCCTGAGCACTTCGTTCACATCACCTGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 |
||
| CDS-3UTR CCA 90 bp | CTGCTTCACGAAGCATCGGCTGATCCAGTAACAGTCCACACTGTCTTCCACCATCCAACGCGCGATACATaGATGGGAGAGGGAACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLHEASADPVTVHTVFHHPTRDT*MGEGTS Trigger: AGAGGTTCCCTCTCCCATCCATGTATCGCGCGTTGG...ATGGTGGAAGACAGTGTGGACTGTTACTGGATCAGCCGATGCTTCGTGAAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221352.2 |
||
| 3UTR CAA 72 bp | GAGGGGGACTATTTCTCCTTGCCAGGAGTGGGACACTaGACTATAATAATCCTAGCGCTCAGGAGGCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EGDYFSLPGVGH*TIIILALRRLR Trigger: CCTCAGCCTCCTGAGCGCTAGGATTATTATAGTCAAGTGTCCCACTCCTGGCAAGGAGAAATAGTCCCCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223000.2 |
||
| CDS-3UTR TCA 90 bp | AGAGCAGGTGATGTGAACGAAGTGCTCAGGGAGGGCCTGCAGACTGCCCATGTACAGGAGGATTTCCAGTaGTTTCTTTTCTTCGACACC | + |
|
Preference number: 4 (lower is better) Translates to: RAGDVNEVLREGLQTAHVQEDFQ*FLFFDT Trigger: GGTGTCGAAGAAAAGAAATCACTGGAAATCCTCCTG...TACATGGGCAGTCTGCAGGCCCTCCCTGAGCACTTCGTTCACATCACCTGCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 |
||
| CDS-3UTR GCA 90 bp | GGTAGAGCAGGTGATGTGAACGAAGTGCTCAGGGAGGGCCTGCAGACTGCCCATCTTCGTTATCTTCTCTaGACTGTTCAATGCCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: GRAGDVNEVLREGLQTAHLRYLL*TVQCHD Trigger: GTCATGGCATTGAACAGTGCAGAGAAGATAACGAAG...ATGGGCAGTCTGCAGGCCCTCCCTGAGCACTTCGTTCACATCACCTGCTCTACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 |
||
| CDS-3UTR GCA 90 bp | GATGTGAACGAAGTGCTCAGGGAGGGCCTGCAGACTGCCCATGTAGTCACGAGCCTTCGTTATCTTCTCTaGACTGTTCAATGCCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: DVNEVLREGLQTAHVVTSLRYLL*TVQCHD Trigger: GTCATGGCATTGAACAGTGCAGAGAAGATAACGAAG...GCTCGTGACTACATGGGCAGTCTGCAGGCCCTCCCTGAGCACTTCGTTCACATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 |
||
| CDS-3UTR TCA 90 bp | CACCATCTCTTCCATGGCCTTGGCGATGGCAAGAAAGACTTCATCCTCCGGCTCCAGGAGGATTTCCAGTaGTTTCTTTTCTTCGACACC | + |
|
Preference number: 4 (lower is better) Translates to: HHLFHGLGDGKKDFILRLQEDFQ*FLFFDT Trigger: GGTGTCGAAGAAAAGAAATCACTGGAAATCCTCCTG...GAGCCGGAGGATGAAGTCTTTCTTGCCATCGCCAAGGCCATGGAAGAGATGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221352.2 ENSMUST00000221795.2 |
||
| CDS-3UTR GCA 90 bp | GCAGGTGATGTGAACGAAGTGCTCAGGGAGGGCCTGCAGACTGCCCATGTAGTCATTCAAGCTGATACATaGGAAGATACACTTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: AGDVNEVLREGLQTAHVVIQADT*EDTLQP Trigger: AGGCTGAAGTGTATCTTCGCATGTATCAGCTTGAAT...GACTACATGGGCAGTCTGCAGGCCCTCCCTGAGCACTTCGTTCACATCACCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 |
||
| CDS-3UTR GCA 90 bp | GGTAGAGCAGGTGATGTGAACGAAGTGCTCAGGGAGGGCCTGCAGACTGCCCATTACTTGTTATTTAACTaGTTCACGAAGCATCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GRAGDVNEVLREGLQTAHYLLFN*FTKHRL Trigger: CAGCCGATGCTTCGTGAAGCAGTTAAATAACAAGTA...ATGGGCAGTCTGCAGGCCCTCCCTGAGCACTTCGTTCACATCACCTGCTCTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 |
||
| CDS-3UTR GCA 90 bp | GCAGGTGATGTGAACGAAGTGCTCAGGGAGGGCCTGCAGACTGCCCATGTAGTCTACTTGTTATTTAACTaGTTCACGAAGCATCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AGDVNEVLREGLQTAHVVYLLFN*FTKHRL Trigger: CAGCCGATGCTTCGTGAAGCAGTTAAATAACAAGTA...GACTACATGGGCAGTCTGCAGGCCCTCCCTGAGCACTTCGTTCACATCACCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 |
||
| CDS-3UTR CCA 90 bp | GTAAGGCAGTTTGGACACTGCAGAACACGTCTTCAGGTGACTCAGCAGCCTACTGGGAGAGGGAACCTCTaGCTAAATGTGCAAAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VRQFGHCRTRLQVTQQPTGRGNL*LNVQSF Trigger: GAAGCTTTGCACATTTAGCCAGAGGTTCCCTCTCCC...AGTAGGCTGCTGAGTCACCTGAAGACGTGTTCTGCAGTGTCCAAACTGCCTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221352.2 |
||
| CDS-3UTR CCA 90 bp | CTATTCCCGCTATTCCCGCTGCTTCTGGTCCCTGCTTCTCTCACTGGGAATTTGTCTCTTCCATGGCCTTaGCGATGGCAAGAAAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: LFPLFPLLLVPASLTGNLSLPWP*RWQERL Trigger: AAGTCTTTCTTGCCATCGCCAAGGCCATGGAAGAGA...CAAATTCCCAGTGAGAGAAGCAGGGACCAGAAGCAGCGGGAATAGCGGGAATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223000.2 |
||
| CDS-3UTR GCA 90 bp | CCGCTGCTTCTGGTCCCTGCTTCTCTCACTGGGAATTTGTTCCACTCCCAGGAGTACTTGTTATTTAACTaGTTCACGAAGCATCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLLLVPASLTGNLFHSQEYLLFN*FTKHRL Trigger: CAGCCGATGCTTCGTGAAGCAGTTAAATAACAAGTA...CTCCTGGGAGTGGAACAAATTCCCAGTGAGAGAAGCAGGGACCAGAAGCAGCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223000.2 |
||
| CDS-3UTR TCA 90 bp | TATTTCTCCTTGCCAGGAGTGGGACACTTGACTATAATAATCCTAGCGCTCAGGTCACGAAGCATCGGCTaGTCCAGTAACAGTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: YFSLPGVGHLTIIILALRSRSIG*SSNSPH Trigger: GTGTGGACTGTTACTGGATCAGCCGATGCTTCGTGA...CCTGAGCGCTAGGATTATTATAGTCAAGTGTCCCACTCCTGGCAAGGAGAAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223000.2 |
||
| CDS-3UTR GCA 90 bp | GGTAGAGCAGGTGATGTGAACGAAGTGCTCAGGGAGGGCCTGCAGACTGCCCATCTCTGCACTGTTCAATaGCATGACCTTTATTTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: GRAGDVNEVLREGLQTAHLCTVQ*HDLYFK Trigger: TTTAAAATAAAGGTCATGGCATTGAACAGTGCAGAG...ATGGGCAGTCTGCAGGCCCTCCCTGAGCACTTCGTTCACATCACCTGCTCTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 |
||
| CDS-3UTR GCA 90 bp | CTATTTCTCCTTGCCAGGAGTGGGACACTTGACTATAATAATCCTAGCGCTCAGCTTCGTTATCTTCTCTaGACTGTTCAATGCCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: LFLLARSGTLDYNNPSAQLRYLL*TVQCHD Trigger: GTCATGGCATTGAACAGTGCAGAGAAGATAACGAAG...CTGAGCGCTAGGATTATTATAGTCAAGTGTCCCACTCCTGGCAAGGAGAAATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223000.2 |
||
| CDS-3UTR CAA 90 bp | GATGTGAACGAAGTGCTCAGGGAGGGCCTGCAGACTGCCCATGTAGTCACGAGCGGGGTCCCACAGTGTTaGTGCCACAAGTCGATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: DVNEVLREGLQTAHVVTSGVPQC*CHKSMA Trigger: GGCCATCGACTTGTGGCACAAACACTGTGGGACCCC...GCTCGTGACTACATGGGCAGTCTGCAGGCCCTCCCTGAGCACTTCGTTCACATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 |
||
| CDS TCA 90 bp | AGTCGATGGCCTTGCTCACGATGGCATCTGAGCTGTCCTGAGGAATaGCTTTATCCCAGACCCTCTGTAAACTGGACTCGGGGAGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: SRWPCSRWHLSCPEE*LYPRPSVNWTRGGI Trigger: GATGCCTCCCCGAGTCCAGTTTACAGAGGGTCTGGGATAAAGTCATTCCTCAGGACAGCTCAGATGCCATCGTGAGCAAGGCCATCGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220787.2 |
||
| CDS TCA 90 bp | TGCCACAAGTCGATGGCCTTGCTCACGATGGCATCTGAGCTGTCCTaGGGAATGACTTTATCCCAGACCCTCTGTAAACTGGACTCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: CHKSMALLTMASELS*GMTLSQTLCKLDSG Trigger: CCCCGAGTCCAGTTTACAGAGGGTCTGGGATAAAGTCATTCCTCAGGACAGCTCAGATGCCATCGTGAGCAAGGCCATCGACTTGTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220787.2 |
||
| CDS CCA 90 bp | AGGCCGAATGCACTGGGGTCCCACAGTGTTTGTGCCACAAGTCGATaGCCTTGCTCACGATGGCATCTGAGCTGTCCTGAGGAATATTTT | + |
|
Preference number: 5 (lower is better) Translates to: RPNALGSHSVCATSR*PCSRWHLSCPEEYF Trigger: AAAATATTCCTCAGGACAGCTCAGATGCCATCGTGAGCAAGGCCATCGACTTGTGGCACAAACACTGTGGGACCCCAGTGCATTCGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 |
||
| CDS GCA 90 bp | AATGCACTGGGGTCCCACAGTGTTTGTGCCACAAGTCGATGGCCTTaGTCACGATGGCATCTGAGCTGTCCTGAGGAATATTTTCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: NALGSHSVCATSRWP*SRWHLSCPEEYFPG Trigger: TCCTGGAAAATATTCCTCAGGACAGCTCAGATGCCATCGTGAGCAAGGCCATCGACTTGTGGCACAAACACTGTGGGACCCCAGTGCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 |
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| CDS-3UTR CAA 90 bp | GATGTGAACGAAGTGCTCAGGGAGGGCCTGCAGACTGCCCATGTAGTCACGAGCAAAGCGTCCCTGTACTaGTTATTTAACTGCTTCACG | + |
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Preference number: 5 (lower is better) Translates to: DVNEVLREGLQTAHVVTSKASLY*LFNCFT Trigger: CGTGAAGCAGTTAAATAACAAGTACAGGGACGCTTT...GCTCGTGACTACATGGGCAGTCTGCAGGCCCTCCCTGAGCACTTCGTTCACATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 ENSMUST00000220579.2 |
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| CDS-3UTR CAA 90 bp | GCAGGTGATGTGAACGAAGTGCTCAGGGAGGGCCTGCAGACTGCCCATGTAGTCAAAGCGTCCCTGTACTaGTTATTTAACTGCTTCACG | + |
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Preference number: 5 (lower is better) Translates to: AGDVNEVLREGLQTAHVVKASLY*LFNCFT Trigger: CGTGAAGCAGTTAAATAACAAGTACAGGGACGCTTT...GACTACATGGGCAGTCTGCAGGCCCTCCCTGAGCACTTCGTTCACATCACCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 ENSMUST00000220579.2 |
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| CDS-3UTR CAA 90 bp | GAACGAAGTGCTCAGGGAGGGCCTGCAGACTGCCCATGTAGTCACGAGCTGTCAAAAGCGTCCCTGTACTaGTTATTTAACTGCTTCACG | + |
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Preference number: 5 (lower is better) Translates to: ERSAQGGPADCPCSHELSKASLY*LFNCFT Trigger: CGTGAAGCAGTTAAATAACAAGTACAGGGACGCTTT...TGACAGCTCGTGACTACATGGGCAGTCTGCAGGCCCTCCCTGAGCACTTCGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220579.2 |
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| CDS-3UTR CAA 90 bp | CACTGGGAATTTGTTCCACTCCCAGGAGGCACGCGTGAGCAATGGGCTTGCATGGCCTTCATTTCTAGATaGCAAACCCGAGGAGACAAA | + |
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Preference number: 5 (lower is better) Translates to: HWEFVPLPGGTREQWACMAFISR*QTRGDK Trigger: TTTGTCTCCTCGGGTTTGCAATCTAGAAATGAAGGC...CATGCAAGCCCATTGCTCACGCGTGCCTCCTGGGAGTGGAACAAATTCCCAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223000.2 |
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| CDS CCA 90 bp | GCCTTCCATACCAACGCGCGATACATGGATGGGAGAGGGAACCTCTaGCTAAATGTGCAAAGCTTCTCGATGTCCAAACGGTCATCTTTC | + |
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Preference number: 5 (lower is better) Translates to: AFHTNARYMDGRGNL*LNVQSFSMSKRSSF Trigger: GAAAGATGACCGTTTGGACATCGAGAAGCTTTGCACATTTAGCCAGAGGTTCCCTCTCCCATCCATGTATCGCGCGTTGGTATGGAAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 ENSMUST00000220787.2 ENSMUST00000221352.2 ENSMUST00000222160.2 |
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| CDS CCA 90 bp | GGGTCCCACAGTGTTTGTGCCACAAGTCGATGGCCTTGCTCACGATaGCATCTGAGCTGTCCTGAGGAATATTTTCCAGGAACTTCGTTA | + |
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Preference number: 5 (lower is better) Translates to: GSHSVCATSRWPCSR*HLSCPEEYFPGTSL Trigger: TAACGAAGTTCCTGGAAAATATTCCTCAGGACAGCTCAGATGCCATCGTGAGCAAGGCCATCGACTTGTGGCACAAACACTGTGGGACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 |
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| CDS-3UTR CAA 90 bp | CACTGGGAATTTGTTCCACTCCCAGGAGGCACGCGTGAGCAATGGGCTTGCATGAAAGCGTCCCTGTACTaGTTATTTAACTGCTTCACG | + |
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Preference number: 5 (lower is better) Translates to: HWEFVPLPGGTREQWACMKASLY*LFNCFT Trigger: CGTGAAGCAGTTAAATAACAAGTACAGGGACGCTTT...CATGCAAGCCCATTGCTCACGCGTGCCTCCTGGGAGTGGAACAAATTCCCAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223000.2 |
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| CDS CCA 90 bp | CAGCTCTTCCAACAACAAGAAGCACTTAAGTTTGTTTTTATACTATaGTTCTGTTTTACCAAACGGTCATCTTTCAGGAGGATTTCCAGT | + |
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Preference number: 5 (lower is better) Translates to: QLFQQQEALKFVFIL*FCFTKRSSFRRISS Trigger: ACTGGAAATCCTCCTGAAAGATGACCGTTTGGTAAAACAGAACCATAGTATAAAAACAAACTTAAGTGCTTCTTGTTGTTGGAAGAGCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221795.2 |
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| CDS CCA 72 bp | GCACTGGGGTCCCACAGTGTTTGTGCCACAAGTCGATaGCCTTGCTCACGATGGCATCTGAGCTGTCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: ALGSHSVCATSR*PCSRWHLSCPE Trigger: CTCAGGACAGCTCAGATGCCATCGTGAGCAAGGCCATCGACTTGTGGCACAAACACTGTGGGACCCCAGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 ENSMUST00000220787.2 |
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| CDS TCA 72 bp | GTGCCACAAGTCGATGGCCTTGCTCACGATGGCATCTaGGCTGTCCTGAGGAATGACTTTATCCCAGACCCT | + |
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Preference number: 6 (lower is better) Translates to: VPQVDGLAHDGI*AVLRNDFIPDP Trigger: AGGGTCTGGGATAAAGTCATTCCTCAGGACAGCTCAGATGCCATCGTGAGCAAGGCCATCGACTTGTGGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220787.2 |
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| CDS GCA 72 bp | GGGTCCCACAGTGTTTGTGCCACAAGTCGATGGCCTTaGTCACGATGGCATCTGAGCTGTCCTGAGGAATAT | + |
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Preference number: 6 (lower is better) Translates to: GSHSVCATSRWP*SRWHLSCPEEY Trigger: ATATTCCTCAGGACAGCTCAGATGCCATCGTGAGCAAGGCCATCGACTTGTGGCACAAACACTGTGGGACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 |
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| CDS TCA 72 bp | CCTTGCTCACGATGGCATCTGAGCTGTCCTGAGGAATaGCTTTATCCCAGACCCTCTGTAAACTGGACTCGG | + |
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Preference number: 6 (lower is better) Translates to: PCSRWHLSCPEE*LYPRPSVNWTR Trigger: CCGAGTCCAGTTTACAGAGGGTCTGGGATAAAGTCATTCCTCAGGACAGCTCAGATGCCATCGTGAGCAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220787.2 |
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| CDS CCA 72 bp | ACCAACGCGCGATACATGGATGGGAGAGGGAACCTCTaGCTAAATGTGCAAAGCTTCTCGATGTCCAAACGG | + |
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Preference number: 6 (lower is better) Translates to: TNARYMDGRGNL*LNVQSFSMSKR Trigger: CCGTTTGGACATCGAGAAGCTTTGCACATTTAGCCAGAGGTTCCCTCTCCCATCCATGTATCGCGCGTTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 ENSMUST00000220787.2 ENSMUST00000221352.2 ENSMUST00000222160.2 |
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| CDS TCA 72 bp | GTGCCACAAGTCGATGGCCTTGCTCACGATGGCATCTaGGCTGTCCTGAGGAATATTTTCCAGGAACTTCGT | + |
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Preference number: 6 (lower is better) Translates to: VPQVDGLAHDGI*AVLRNIFQELR Trigger: ACGAAGTTCCTGGAAAATATTCCTCAGGACAGCTCAGATGCCATCGTGAGCAAGGCCATCGACTTGTGGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 |
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| CDS TCA 72 bp | TCGATGGCCTTGCTCACGATGGCATCTGAGCTGTCCTaGGGAATGACTTTATCCCAGACCCTCTGTAAACTG | + |
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Preference number: 6 (lower is better) Translates to: SMALLTMASELS*GMTLSQTLCKL Trigger: CAGTTTACAGAGGGTCTGGGATAAAGTCATTCCTCAGGACAGCTCAGATGCCATCGTGAGCAAGGCCATCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220787.2 |
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| CDS CCA 72 bp | AGTGTTTGTGCCACAAGTCGATGGCCTTGCTCACGATaGCATCTGAGCTGTCCTGAGGAATATTTTCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: SVCATSRWPCSR*HLSCPEEYFPG Trigger: TCCTGGAAAATATTCCTCAGGACAGCTCAGATGCCATCGTGAGCAAGGCCATCGACTTGTGGCACAAACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021797.9 ENSMUST00000179852.9 |
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| CDS CCA 72 bp | CAACAACAAGAAGCACTTAAGTTTGTTTTTATACTATaGTTCTGTTTTACCAAACGGTCATCTTTCAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: QQQEALKFVFIL*FCFTKRSSFRR Trigger: CCTCCTGAAAGATGACCGTTTGGTAAAACAGAACCATAGTATAAAAACAAACTTAAGTGCTTCTTGTTGTTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221795.2 |
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