RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TBC1D5 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000023923

Ensembl transcript IDs: ENSMUST00000024717.10, ENSMUST00000224528.2

Found 300 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCACATGGCCTCTTCCCCAGCTCTCATTTCCTAGCAGTTCCAGGGTaGGGAAGGGAGATGGCACTGGCCGGTGCAGGGCCACAGGTGCTC +
Preference number: 1 (lower is better)
Translates to: AHGLFPSSHFLAVPG*GREMALAGAGPQVL
Trigger: GAGCACCTGTGGCCCTGCACCGGCCAGTGCCATCTCCCTTCCCCACCCTGGAACTGCTAGGAAATGAGAGCTGGGGAAGAGGCCATGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
3UTR CCA 90 bp CCCAGGCAGGGGCCCCGAGGCAGGCAGGCCCATCCTTGGAGTGTCTaGATGCAGAGTTTACAGCTGAGCTCCAAGAATAGGGTGTTGGGG +
Preference number: 1 (lower is better)
Translates to: PRQGPRGRQAHPWSV*MQSLQLSSKNRVLG
Trigger: CCCCAACACCCTATTCTTGGAGCTCAGCTGTAAACTCTGCATCCAGACACTCCAAGGATGGGCCTGCCTGCCTCGGGGCCCCTGCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR GCA 90 bp GCTCCTACAATTCACTCTGACTCCAGCCCTGGGAGCCACCCGCTCTaGTCCCTCTGTGTGGCATGTTGGGCTTCCAAGGCAGGAGTGAGA +
Preference number: 1 (lower is better)
Translates to: APTIHSDSSPGSHPL*SLCVACWASKAGVR
Trigger: TCTCACTCCTGCCTTGGAAGCCCAACATGCCACACAGAGGGAGCAGAGCGGGTGGCTCCCAGGGCTGGAGTCAGAGTGAATTGTAGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR CCA 90 bp TATACCCAGCCCAGGCAGGGGCCCCGAGGCAGGCAGGCCCATCCTTaGAGTGTCTGGATGCAGAGTTTACAGCTGAGCTCCAAGAATAGG +
Preference number: 1 (lower is better)
Translates to: YTQPRQGPRGRQAHP*SVWMQSLQLSSKNR
Trigger: CCTATTCTTGGAGCTCAGCTGTAAACTCTGCATCCAGACACTCCAAGGATGGGCCTGCCTGCCTCGGGGCCCCTGCCTGGGCTGGGTATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR GCA 90 bp CGGAGGAGATTCACCCCTACGAGAACTGGGCTCCGGGGAGGCAGCTaGCCTCCAGAGTTACACTCAGCAGCAGTGTGGTCACTTCAAGTT +
Preference number: 1 (lower is better)
Translates to: RRRFTPTRTGLRGGS*PPELHSAAVWSLQV
Trigger: AACTTGAAGTGACCACACTGCTGCTGAGTGTAACTCTGGAGGGCAGCTGCCTCCCCGGAGCCCAGTTCTCGTAGGGGTGAATCTCCTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
3UTR TCA 90 bp AGGAGGGGACGGAAGACATGTGGCTCTGATGTGGTCTGCTGTGTCTaGCAGTGGGTATGGAGCTGGGGACCTGACCTGGCCCTAATTGGA +
Preference number: 1 (lower is better)
Translates to: RRGRKTCGSDVVCCV*QWVWSWGPDLALIG
Trigger: TCCAATTAGGGCCAGGTCAGGTCCCCAGCTCCATACCCACTGTCAGACACAGCAGACCACATCAGAGCCACATGTCTTCCGTCCCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR CCA 90 bp ACCATCTCAGAGCAGACTGGCGTGGAGCCACTGCACTCCCGGCTGTaGGGACTCTGGAAGGAGAAATCCAGTTGTTCAAGGAGGAACAGC +
Preference number: 1 (lower is better)
Translates to: TISEQTGVEPLHSRL*GLWKEKSSCSRRNS
Trigger: GCTGTTCCTCCTTGAACAACTGGATTTCTCCTTCCAGAGTCCCCACAGCCGGGAGTGCAGTGGCTCCACGCCAGTCTGCTCTGAGATGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR CCA 90 bp CATGTGGCACCCACACAAGCACAGGAGCGGGGCACATCACGGGCATaGGCAGGGCAGGTAGGTCGAGGGGTTATGAAATGTCCATTCAAA +
Preference number: 1 (lower is better)
Translates to: HVAPTQAQERGTSRA*AGQVGRGVMKCPFK
Trigger: TTTGAATGGACATTTCATAACCCCTCGACCTACCTGCCCTGCCCATGCCCGTGATGTGCCCCGCTCCTGTGCTTGTGTGGGTGCCACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR CCA 90 bp CTAGGGACCATAGAAACATCTCAGTGTGAACCTGGGGTTCTCATGTaGCACCCACACAAGCACAGGAGCGGGGCACATCACGGGCATGGG +
Preference number: 1 (lower is better)
Translates to: LGTIETSQCEPGVLM*HPHKHRSGAHHGHG
Trigger: CCCATGCCCGTGATGTGCCCCGCTCCTGTGCTTGTGTGGGTGCCACATGAGAACCCCAGGTTCACACTGAGATGTTTCTATGGTCCCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR TCA 90 bp CCTTATTCTCAACGCAAAGGAGATGCTGGGGACAGGGCTCAGCAGTaGCAGACATGGCCGGCACTGTCCCAGACCTGGATGGATCAGTCA +
Preference number: 1 (lower is better)
Translates to: PYSQRKGDAGDRAQQ*QTWPALSQTWMDQS
Trigger: TGACTGATCCATCCAGGTCTGGGACAGTGCCGGCCATGTCTGTCACTGCTGAGCCCTGTCCCCAGCATCTCCTTTGCGTTGAGAATAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR TCA 90 bp GCAGGCAGGCCCATCCTTGGAGTGTCTGGATGCAGAGTTTACAGCTaGGCTCCAAGAATAGGGTGTTGGGGGTTGAATAGGAGCCCTGTA +
Preference number: 1 (lower is better)
Translates to: AGRPILGVSGCRVYS*APRIGCWGLNRSPV
Trigger: TACAGGGCTCCTATTCAACCCCCAACACCCTATTCTTGGAGCTCAGCTGTAAACTCTGCATCCAGACACTCCAAGGATGGGCCTGCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR TCA 90 bp ACCTGCTCCCACAGAAGGAACTCCAGGTCTAATTCCCAGGAGGTCTaGCTCCGGGTTGTGCGAATGTGGTTTTCCTCTGTGCTCCTCATT +
Preference number: 1 (lower is better)
Translates to: TCSHRRNSRSNSQEV*LRVVRMWFSSVLLI
Trigger: AATGAGGAGCACAGAGGAAAACCACATTCGCACAACCCGGAGTCAGACCTCCTGGGAATTAGACCTGGAGTTCCTTCTGTGGGAGCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR GCA 90 bp CCTCTGTGTGGCATGTTGGGCTTCCAAGGCAGGAGTGAGACTGCCTaGCAGATTCACTCAGTATCAACAAGTTCCCTGTGGCTGAAGCTT +
Preference number: 1 (lower is better)
Translates to: PLCGMLGFQGRSETA*QIHSVSTSSLWLKL
Trigger: AAGCTTCAGCCACAGGGAACTTGTTGATACTGAGTGAATCTGGCAGGCAGTCTCACTCCTGCCTTGGAAGCCCAACATGCCACACAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR CCA 90 bp ATAGGGTGTTGGGGGTTGAATAGGAGCCCTGTATCTTGTGGTACCTaGAACGCTCTACAGGAAACCTGCTCCCACAGAAGGAACTCCAGG +
Preference number: 1 (lower is better)
Translates to: IGCWGLNRSPVSCGT*NALQETCSHRRNSR
Trigger: CCTGGAGTTCCTTCTGTGGGAGCAGGTTTCCTGTAGAGCGTTCCAGGTACCACAAGATACAGGGCTCCTATTCAACCCCCAACACCCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR CCA 90 bp GGGACTCTGGAAGGAGAAATCCAGTTGTTCAAGGAGGAACAGCGGTaGCTGAAGCTTAGGAAGCCCAGGGTCCAGAACTGTATTTGTGTC +
Preference number: 1 (lower is better)
Translates to: GTLEGEIQLFKEEQR*LKLRKPRVQNCICV
Trigger: GACACAAATACAGTTCTGGACCCTGGGCTTCCTAAGCTTCAGCCACCGCTGTTCCTCCTTGAACAACTGGATTTCTCCTTCCAGAGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR GCA 90 bp AGAGAAGAGCTTTCCATCCTTGGTTCTTCCAAGGAGAGAGTGGCCTaGCTAGGGACCATAGAAACATCTCAGTGTGAACCTGGGGTTCTC +
Preference number: 1 (lower is better)
Translates to: REELSILGSSKERVA*LGTIETSQCEPGVL
Trigger: GAGAACCCCAGGTTCACACTGAGATGTTTCTATGGTCCCTAGGCAGGCCACTCTCTCCTTGGAAGAACCAAGGATGGAAAGCTCTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR TCA 90 bp CTCTGGAAGGAGAAATCCAGTTGTTCAAGGAGGAACAGCGGTGGCTaGAGCTTAGGAAGCCCAGGGTCCAGAACTGTATTTGTGTCAAAC +
Preference number: 1 (lower is better)
Translates to: LWKEKSSCSRRNSGG*SLGSPGSRTVFVSN
Trigger: GTTTGACACAAATACAGTTCTGGACCCTGGGCTTCCTAAGCTTCAGCCACCGCTGTTCCTCCTTGAACAACTGGATTTCTCCTTCCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR GCA 90 bp TCTTTTTGTAAAGAGTTCCAGTGGGTTGAACCAATGCCAAATGCATaGTGGGAAAAAGACACTGGTTCAGCAGGGTGTCCGCCAGTGGGG +
Preference number: 1 (lower is better)
Translates to: SFCKEFQWVEPMPNA*WEKDTGSAGCPPVG
Trigger: CCCCACTGGCGGACACCCTGCTGAACCAGTGTCTTTTTCCCAGCATGCATTTGGCATTGGTTCAACCCACTGGAACTCTTTACAAAAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR GCA 90 bp TGTGGTCACTTCAAGTTGCAGTTAGTGCAGAGCAGAAGGTCATCTTaGCAAGCTAAGCCAGGAAGTTCTCGAGAACTGAACCGAGGCACT +
Preference number: 1 (lower is better)
Translates to: CGHFKLQLVQSRRSS*QAKPGSSRELNRGT
Trigger: AGTGCCTCGGTTCAGTTCTCGAGAACTTCCTGGCTTAGCTTGGCAAGATGACCTTCTGCTCTGCACTAACTGCAACTTGAAGTGACCACA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
3UTR TCA 90 bp ACCTGGATGGATCAGTCAATACTTCCCACACTAGATCTAAGGTACTaGCACGGTTATGTCAAGGCTTTAAGTGGAATGCTTGCTGGAAGC +
Preference number: 1 (lower is better)
Translates to: TWMDQSILPTLDLRY*HGYVKALSGMLAGS
Trigger: GCTTCCAGCAAGCATTCCACTTAAAGCCTTGACATAACCGTGTCAGTACCTTAGATCTAGTGTGGGAAGTATTGACTGATCCATCCAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR CCA 90 bp CAAGCAAAAGCAACCTGTACTGAACAGCAGGTTATACTAGAGTTTTaGCATTTGTCCAGCCTTTCTGACACTAAAGACATGGCTGGCAAG +
Preference number: 1 (lower is better)
Translates to: QAKATCTEQQVILEF*HLSSLSDTKDMAGK
Trigger: CTTGCCAGCCATGTCTTTAGTGTCAGAAAGGCTGGACAAATGCCAAAACTCTAGTATAACCTGCTGTTCAGTACAGGTTGCTTTTGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
3UTR CCA 90 bp ATGTCCATTCAAACAGTAATGGGTCAGCCTATCATCTTCTTGGCCTaGTGGGTAGCCAGTGATAGTTATCTATTGACCTTATTCTCAACG +
Preference number: 1 (lower is better)
Translates to: MSIQTVMGQPIIFLA*WVASDSYLLTLFST
Trigger: CGTTGAGAATAAGGTCAATAGATAACTATCACTGGCTACCCACCAGGCCAAGAAGATGATAGGCTGACCCATTACTGTTTGAATGGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR CCA 90 bp TGCATTGAAAGAAGCATAGTTGCCTCTTTTTGTAAAGAGTTCCAGTaGGTTGAACCAATGCCAAATGCATGCTGGGAAAAAGACACTGGT +
Preference number: 1 (lower is better)
Translates to: CIERSIVASFCKEFQ*VEPMPNACWEKDTG
Trigger: ACCAGTGTCTTTTTCCCAGCATGCATTTGGCATTGGTTCAACCCACTGGAACTCTTTACAAAAAGAGGCAACTATGCTTCTTTCAATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR-3UTR CCA 90 bp GGAGCCACCCGCTCTGCTCCCTCTGTGTGGCATGTTGGGCTTCCAAGGCAGGAGAACTGGCAGAGCTGCTaGGGAGGAGGGGACGGAAGA +
Preference number: 2 (lower is better)
Translates to: GATRSAPSVWHVGLPRQENWQSC*GGGDGR
Trigger: TCTTCCGTCCCCTCCTCCCCAGCAGCTCTGCCAGTT...CTCCTGCCTTGGAAGCCCAACATGCCACACAGAGGGAGCAGAGCGGGTGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR-3UTR GCA 90 bp CAAAGGAGATGCTGGGGACAGGGCTCAGCAGTGACAGACATGGCCGGCACTGTCGGGAGCCACCCGCTCTaGTCCCTCTGTGTGGCATGT +
Preference number: 2 (lower is better)
Translates to: QRRCWGQGSAVTDMAGTVGSHPL*SLCVAC
Trigger: ACATGCCACACAGAGGGAGCAGAGCGGGTGGCTCCC...GACAGTGCCGGCCATGTCTGTCACTGCTGAGCCCTGTCCCCAGCATCTCCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR-3UTR TCA 90 bp CAAAGGAGATGCTGGGGACAGGGCTCAGCAGTGACAGACATGGCCGGCACTGTCCTTCCAAGGCAGGAGTaGGACTGCCTGCCAGATTCA +
Preference number: 2 (lower is better)
Translates to: QRRCWGQGSAVTDMAGTVLPRQE*DCLPDS
Trigger: TGAATCTGGCAGGCAGTCTCACTCCTGCCTTGGAAG...GACAGTGCCGGCCATGTCTGTCACTGCTGAGCCCTGTCCCCAGCATCTCCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR-3UTR GCA 90 bp CCTGTATCTTGTGGTACCTGGAACGCTCTACAGGAAACCTGCTCCCACAGAAGGGGGAGCCACCCGCTCTaGTCCCTCTGTGTGGCATGT +
Preference number: 2 (lower is better)
Translates to: PVSCGTWNALQETCSHRRGSHPL*SLCVAC
Trigger: ACATGCCACACAGAGGGAGCAGAGCGGGTGGCTCCC...CCTTCTGTGGGAGCAGGTTTCCTGTAGAGCGTTCCAGGTACCACAAGATACAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR-3UTR TCA 90 bp ACTGCACTCCCGGCTGTGGGGACTCTGGAAGGAGAAATCCAGTTGTTCAAGGAGATGGAGCTGGGGACCTaGCCTGGCCCTAATTGGAAC +
Preference number: 2 (lower is better)
Translates to: TALPAVGTLEGEIQLFKEMELGT*PGPNWN
Trigger: GTTCCAATTAGGGCCAGGTCAGGTCCCCAGCTCCAT...CTCCTTGAACAACTGGATTTCTCCTTCCAGAGTCCCCACAGCCGGGAGTGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR-3UTR TCA 90 bp CTATTGACCTTATTCTCAACGCAAAGGAGATGCTGGGGACAGGGCTCAGCAGTGGGCCCAGCTGCTCTCTaGGGAGGACAGAAGGCAGAG +
Preference number: 2 (lower is better)
Translates to: LLTLFSTQRRCWGQGSAVGPAAL*GGQKAE
Trigger: CTCTGCCTTCTGTCCTCCTCAGAGAGCAGCTGGGCC...CACTGCTGAGCCCTGTCCCCAGCATCTCCTTTGCGTTGAGAATAAGGTCAATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR-3UTR CCA 90 bp TCCAGCCTTTCTGACACTAAAGACATGGCTGGCAAGGTTGTCCAGCACAGCCAAAACTGGCAGAGCTGCTaGGGAGGAGGGGACGGAAGA +
Preference number: 2 (lower is better)
Translates to: SSLSDTKDMAGKVVQHSQNWQSC*GGGDGR
Trigger: TCTTCCGTCCCCTCCTCCCCAGCAGCTCTGCCAGTT...TTGGCTGTGCTGGACAACCTTGCCAGCCATGTCTTTAGTGTCAGAAAGGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
3UTR-3UTR GCA 90 bp CAAAGGAGATGCTGGGGACAGGGCTCAGCAGTGACAGACATGGCCGGCACTGTCAGTGGGTTGAACCAATaGCAAATGCATGCTGGGAAA +
Preference number: 2 (lower is better)
Translates to: QRRCWGQGSAVTDMAGTVSGLNQ*QMHAGK
Trigger: TTTCCCAGCATGCATTTGGCATTGGTTCAACCCACT...GACAGTGCCGGCCATGTCTGTCACTGCTGAGCCCTGTCCCCAGCATCTCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR-3UTR CCA 90 bp GTGGTACCTGGAACGCTCTACAGGAAACCTGCTCCCACAGAAGGAACTCCAGGTCGGCTGTGGGGACTCTaGAAGGAGAAATCCAGTTGT +
Preference number: 2 (lower is better)
Translates to: VVPGTLYRKPAPTEGTPGRLWGL*KEKSSC
Trigger: ACAACTGGATTTCTCCTTCCAGAGTCCCCACAGCCG...ACCTGGAGTTCCTTCTGTGGGAGCAGGTTTCCTGTAGAGCGTTCCAGGTACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR-3UTR CCA 90 bp CAAAGGAGATGCTGGGGACAGGGCTCAGCAGTGACAGACATGGCCGGCACTGTCTGTCAAGGCTTTAAGTaGAATGCTTGCTGGAAGCCT +
Preference number: 2 (lower is better)
Translates to: QRRCWGQGSAVTDMAGTVCQGFK*NACWKP
Trigger: AGGCTTCCAGCAAGCATTCCACTTAAAGCCTTGACA...GACAGTGCCGGCCATGTCTGTCACTGCTGAGCCCTGTCCCCAGCATCTCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR-3UTR CCA 90 bp AACGCAAAGGAGATGCTGGGGACAGGGCTCAGCAGTGACAGACATGGCCGGCACTGTCAAGGCTTTAAGTaGAATGCTTGCTGGAAGCCT +
Preference number: 2 (lower is better)
Translates to: NAKEMLGTGLSSDRHGRHCQGFK*NACWKP
Trigger: AGGCTTCCAGCAAGCATTCCACTTAAAGCCTTGACA...GTGCCGGCCATGTCTGTCACTGCTGAGCCCTGTCCCCAGCATCTCCTTTGCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR-3UTR CCA 90 bp AGAGCAGCTTCATGGGACATGTATGCAAGCAGGCTCCTCAGAATGCTGAGAAGACATCTCAGAGCAGACTaGCGTGGAGCCACTGCACTC +
Preference number: 2 (lower is better)
Translates to: RAASWDMYASRLLRMLRRHLRAD*RGATAL
Trigger: GAGTGCAGTGGCTCCACGCCAGTCTGCTCTGAGATG...TCTTCTCAGCATTCTGAGGAGCCTGCTTGCATACATGTCCCATGAAGCTGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR-3UTR CCA 90 bp TACAGAGCAGCTTCATGGGACATGTATGCAAGCAGGCTCCTCAGAATGCTGAGACATCTCAGAGCAGACTaGCGTGGAGCCACTGCACTC +
Preference number: 2 (lower is better)
Translates to: YRAASWDMYASRLLRMLRHLRAD*RGATAL
Trigger: GAGTGCAGTGGCTCCACGCCAGTCTGCTCTGAGATG...TCTCAGCATTCTGAGGAGCCTGCTTGCATACATGTCCCATGAAGCTGCTCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR CAA 90 bp GCTGCCCTCCAGAGTTACACTCAGCAGCAGTGTGGTCACTTCAAGTaGCAGTTAGTGCAGAGCAGAAGGTCATCTTGCCAAGCTAAGCCA +
Preference number: 2 (lower is better)
Translates to: AALQSYTQQQCGHFK*QLVQSRRSSCQAKP
Trigger: TGGCTTAGCTTGGCAAGATGACCTTCTGCTCTGCACTAACTGCAACTTGAAGTGACCACACTGCTGCTGAGTGTAACTCTGGAGGGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
3UTR-3UTR TCA 90 bp GGGGAAGTTGTGAAACCAACTTTTCCTTCTGAGTGTAAACTGGCAGAGCTGCTGATGGAGCTGGGGACCTaGCCTGGCCCTAATTGGAAC +
Preference number: 2 (lower is better)
Translates to: GEVVKPTFPSECKLAELLMELGT*PGPNWN
Trigger: GTTCCAATTAGGGCCAGGTCAGGTCCCCAGCTCCAT...CAGCAGCTCTGCCAGTTTACACTCAGAAGGAAAAGTTGGTTTCACAACTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR-3UTR TCA 90 bp GAACAGCGGTGGCTGAAGCTTAGGAAGCCCAGGGTCCAGAACTGTATTTGTGTCCAAGTTCCCTGTGGCTaGAGCTTTGATAAGGGGAAG +
Preference number: 2 (lower is better)
Translates to: EQRWLKLRKPRVQNCICVQVPCG*SFDKGK
Trigger: CTTCCCCTTATCAAAGCTTCAGCCACAGGGAACTTG...GACACAAATACAGTTCTGGACCCTGGGCTTCCTAAGCTTCAGCCACCGCTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR-3UTR GCA 90 bp CCACTGCACTCCCGGCTGTGGGGACTCTGGAAGGAGAAATCCAGTTGTTCAAGGAGTGGGTTGAACCAATaGCAAATGCATGCTGGGAAA +
Preference number: 2 (lower is better)
Translates to: PLHSRLWGLWKEKSSCSRSGLNQ*QMHAGK
Trigger: TTTCCCAGCATGCATTTGGCATTGGTTCAACCCACT...CCTTGAACAACTGGATTTCTCCTTCCAGAGTCCCCACAGCCGGGAGTGCAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR-3UTR GCA 90 bp CCACCCGCTCTGCTCCCTCTGTGTGGCATGTTGGGCTTCCAAGGCAGGAGTGAGCTGGAAACCTCTATCTaGATTTTGGTAAACATAGTG +
Preference number: 2 (lower is better)
Translates to: PPALLPLCGMLGFQGRSELETSI*ILVNIV
Trigger: CACTATGTTTACCAAAATGCAGATAGAGGTTTCCAG...CTCACTCCTGCCTTGGAAGCCCAACATGCCACACAGAGGGAGCAGAGCGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR-3UTR CCA 90 bp GTCAAGGCTTTAAGTGGAATGCTTGCTGGAAGCCTTCTAGCAGGGATGGATGGTCTGGGAAAAAGACACTaGTTCAGCAGGGTGTCCGCC +
Preference number: 2 (lower is better)
Translates to: VKALSGMLAGSLLAGMDGLGKRH*FSRVSA
Trigger: GGCGGACACCCTGCTGAACCAGTGTCTTTTTCCCAG...ACCATCCATCCCTGCTAGAAGGCTTCCAGCAAGCATTCCACTTAAAGCCTTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR-3UTR CCA 90 bp ACAGAAGGAACTCCAGGTCTAATTCCCAGGAGGTCTGACTCCGGGTTGTGCGAACATGTGGCTCTGATGTaGTCTGCTGTGTCTGACAGT +
Preference number: 2 (lower is better)
Translates to: TEGTPGLIPRRSDSGLCEHVALM*SAVSDS
Trigger: ACTGTCAGACACAGCAGACCACATCAGAGCCACATG...TTCGCACAACCCGGAGTCAGACCTCCTGGGAATTAGACCTGGAGTTCCTTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR CAA 90 bp ACAGAAGGAACTCCAGGTCTAATTCCCAGGAGGTCTGACTCCGGGTaGTGCGAATGTGGTTTTCCTCTGTGCTCCTCATTTAACAGGCCA +
Preference number: 2 (lower is better)
Translates to: TEGTPGLIPRRSDSG*CECGFPLCSSFNRP
Trigger: TGGCCTGTTAAATGAGGAGCACAGAGGAAAACCACATTCGCACAACCCGGAGTCAGACCTCCTGGGAATTAGACCTGGAGTTCCTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR-3UTR CCA 90 bp TTATTAGTACACATCAAGTGGGCTCGCTCTGCCAAGGAGGCATTTCCTACATCACTGCACTCCCGGCTGTaGGGACTCTGGAAGGAGAAA +
Preference number: 2 (lower is better)
Translates to: LLVHIKWARSAKEAFPTSLHSRL*GLWKEK
Trigger: TTTCTCCTTCCAGAGTCCCCACAGCCGGGAGTGCAG...TGATGTAGGAAATGCCTCCTTGGCAGAGCGAGCCCACTTGATGTGTACTAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
3UTR-3UTR CCA 90 bp TTATGTCAAGGCTTTAAGTGGAATGCTTGCTGGAAGCCTTCTAGCAGGGATGGACTGCACTCCCGGCTGTaGGGACTCTGGAAGGAGAAA +
Preference number: 2 (lower is better)
Translates to: LCQGFKWNACWKPSSRDGLHSRL*GLWKEK
Trigger: TTTCTCCTTCCAGAGTCCCCACAGCCGGGAGTGCAG...TCCATCCCTGCTAGAAGGCTTCCAGCAAGCATTCCACTTAAAGCCTTGACATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR-3UTR CCA 90 bp TCCAGCCTTTCTGACACTAAAGACATGGCTGGCAAGGTTGTCCAGCACAGCCAACCAAGAATAGGGTGTTaGGGGTTGAATAGGAGCCCT +
Preference number: 2 (lower is better)
Translates to: SSLSDTKDMAGKVVQHSQPRIGC*GLNRSP
Trigger: AGGGCTCCTATTCAACCCCCAACACCCTATTCTTGG...TTGGCTGTGCTGGACAACCTTGCCAGCCATGTCTTTAGTGTCAGAAAGGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
3UTR-3UTR TCA 90 bp GTGGTACCTGGAACGCTCTACAGGAAACCTGCTCCCACAGAAGGAACTCCAGGTGATAAGGGGAAGTTGTaGAACCAACTTTTCCTTCTG +
Preference number: 2 (lower is better)
Translates to: VVPGTLYRKPAPTEGTPGDKGKL*NQLFLL
Trigger: CAGAAGGAAAAGTTGGTTTCACAACTTCCCCTTATC...ACCTGGAGTTCCTTCTGTGGGAGCAGGTTTCCTGTAGAGCGTTCCAGGTACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR-3UTR GCA 90 bp TACAGAGCAGCTTCATGGGACATGTATGCAAGCAGGCTCCTCAGAATGCTGAGATCTGACTCCGGGTTGTaGGAATGTGGTTTTCCTCTG +
Preference number: 2 (lower is better)
Translates to: YRAASWDMYASRLLRMLRSDSGL*ECGFPL
Trigger: CAGAGGAAAACCACATTCGCACAACCCGGAGTCAGA...TCTCAGCATTCTGAGGAGCCTGCTTGCATACATGTCCCATGAAGCTGCTCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR-3UTR GCA 90 bp GTTATACTAGAGTTTTGGCATTTGTCCAGCCTTTCTGACACTAAAGACATGGCTGCCCAGAGGCCCAGCTaGTCTCTGAGGAGGACAGAA +
Preference number: 2 (lower is better)
Translates to: VILEFWHLSSLSDTKDMAAQRPS*SLRRTE
Trigger: TTCTGTCCTCCTCAGAGAGCAGCTGGGCCTCTGGGC...AGCCATGTCTTTAGTGTCAGAAAGGCTGGACAAATGCCAAAACTCTAGTATAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
3UTR-3UTR CCA 90 bp CCTGTATCTTGTGGTACCTGGAACGCTCTACAGGAAACCTGCTCCCACAGAAGGATGCCAAATGCATGCTaGGAAAAAGACACTGGTTCA +
Preference number: 2 (lower is better)
Translates to: PVSCGTWNALQETCSHRRMPNAC*EKDTGS
Trigger: TGAACCAGTGTCTTTTTCCCAGCATGCATTTGGCAT...CCTTCTGTGGGAGCAGGTTTCCTGTAGAGCGTTCCAGGTACCACAAGATACAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR-3UTR GCA 90 bp GTCAAGGCTTTAAGTGGAATGCTTGCTGGAAGCCTTCTAGCAGGGATGGATGGTCCAATGCCAAATGCATaGTGGGAAAAAGACACTGGT +
Preference number: 2 (lower is better)
Translates to: VKALSGMLAGSLLAGMDGPMPNA*WEKDTG
Trigger: ACCAGTGTCTTTTTCCCAGCATGCATTTGGCATTGG...ACCATCCATCCCTGCTAGAAGGCTTCCAGCAAGCATTCCACTTAAAGCCTTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR-3UTR GCA 90 bp TTATGTCAAGGCTTTAAGTGGAATGCTTGCTGGAAGCCTTCTAGCAGGGATGGATCTGACTCCGGGTTGTaGGAATGTGGTTTTCCTCTG +
Preference number: 2 (lower is better)
Translates to: LCQGFKWNACWKPSSRDGSDSGL*ECGFPL
Trigger: CAGAGGAAAACCACATTCGCACAACCCGGAGTCAGA...TCCATCCCTGCTAGAAGGCTTCCAGCAAGCATTCCACTTAAAGCCTTGACATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR-3UTR GCA 90 bp CCGAAGGAAAACTTCCACACCAGCCTGGTTATAGGAACGACACCTCTTTTCAACCCAATGCCAAATGCATaGTGGGAAAAAGACACTGGT +
Preference number: 2 (lower is better)
Translates to: PKENFHTSLVIGTTPLFNPMPNA*WEKDTG
Trigger: ACCAGTGTCTTTTTCCCAGCATGCATTTGGCATTGG...GTTGAAAAGAGGTGTCGTTCCTATAACCAGGCTGGTGTGGAAGTTTTCCTTCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
3UTR-3UTR GCA 90 bp GGTTATGTCAAGGCTTTAAGTGGAATGCTTGCTGGAAGCCTTCTAGCAGGGATGTGTGGTTTTCCTCTGTaGTCCTCATTTAACAGGCCA +
Preference number: 2 (lower is better)
Translates to: GYVKALSGMLAGSLLAGMCGFPL*SSFNRP
Trigger: TGGCCTGTTAAATGAGGAGCACAGAGGAAAACCACA...CATCCCTGCTAGAAGGCTTCCAGCAAGCATTCCACTTAAAGCCTTGACATAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR-3UTR TCA 90 bp CCGAAGGAAAACTTCCACACCAGCCTGGTTATAGGAACGACACCTCTTTTCAACGATAAGGGGAAGTTGTaGAACCAACTTTTCCTTCTG +
Preference number: 2 (lower is better)
Translates to: PKENFHTSLVIGTTPLFNDKGKL*NQLFLL
Trigger: CAGAAGGAAAAGTTGGTTTCACAACTTCCCCTTATC...GTTGAAAAGAGGTGTCGTTCCTATAACCAGGCTGGTGTGGAAGTTTTCCTTCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
3UTR-3UTR GCA 90 bp GTTATACTAGAGTTTTGGCATTTGTCCAGCCTTTCTGACACTAAAGACATGGCTCCACCAGCCCTGCTATaGAGTACAGCTAAGAAGCCT +
Preference number: 2 (lower is better)
Translates to: VILEFWHLSSLSDTKDMAPPALL*STAKKP
Trigger: AGGCTTCTTAGCTGTACTGCATAGCAGGGCTGGTGG...AGCCATGTCTTTAGTGTCAGAAAGGCTGGACAAATGCCAAAACTCTAGTATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
3UTR-3UTR CCA 90 bp TTTACTTCACACTTCCAATCTGATCAGAGAGGACTGCATGAAACACAGAAATGTCTGGGAAAAAGACACTaGTTCAGCAGGGTGTCCGCC +
Preference number: 2 (lower is better)
Translates to: FTSHFQSDQRGLHETQKCLGKRH*FSRVSA
Trigger: GGCGGACACCCTGCTGAACCAGTGTCTTTTTCCCAG...ACATTTCTGTGTTTCATGCAGTCCTCTCTGATCAGATTGGAAGTGTGAAGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
3UTR-3UTR CCA 90 bp GGTTATGTCAAGGCTTTAAGTGGAATGCTTGCTGGAAGCCTTCTAGCAGGGATGATGCCAAATGCATGCTaGGAAAAAGACACTGGTTCA +
Preference number: 2 (lower is better)
Translates to: GYVKALSGMLAGSLLAGMMPNAC*EKDTGS
Trigger: TGAACCAGTGTCTTTTTCCCAGCATGCATTTGGCAT...CATCCCTGCTAGAAGGCTTCCAGCAAGCATTCCACTTAAAGCCTTGACATAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR CAA 90 bp AAAGCAACCTGTACTGAACAGCAGGTTATACTAGAGTTTTGGCATTaGTCCAGCCTTTCTGACACTAAAGACATGGCTGGCAAGGTTGTC +
Preference number: 2 (lower is better)
Translates to: KATCTEQQVILEFWH*SSLSDTKDMAGKVV
Trigger: GACAACCTTGCCAGCCATGTCTTTAGTGTCAGAAAGGCTGGACAAATGCCAAAACTCTAGTATAACCTGCTGTTCAGTACAGGTTGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
3UTR-3UTR CCA 90 bp TTTACTTCACACTTCCAATCTGATCAGAGAGGACTGCATGAAACACAGAAATGTCGGCTGTGGGGACTCTaGAAGGAGAAATCCAGTTGT +
Preference number: 2 (lower is better)
Translates to: FTSHFQSDQRGLHETQKCRLWGL*KEKSSC
Trigger: ACAACTGGATTTCTCCTTCCAGAGTCCCCACAGCCG...ACATTTCTGTGTTTCATGCAGTCCTCTCTGATCAGATTGGAAGTGTGAAGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
3UTR GCA 72 bp AGTTCCAGGGTGGGGAAGGGAGATGGCACTGGCCGGTaGAGGGCCACAGGTGCTCCCCGCTTTGTCTTTAGT +
Preference number: 3 (lower is better)
Translates to: SSRVGKGDGTGR*RATGAPRFVFS
Trigger: ACTAAAGACAAAGCGGGGAGCACCTGTGGCCCTGCACCGGCCAGTGCCATCTCCCTTCCCCACCCTGGAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
3UTR TCA 72 bp CAACGCAAAGGAGATGCTGGGGACAGGGCTCAGCAGTaGCAGACATGGCCGGCACTGTCCCAGACCTGGATG +
Preference number: 3 (lower is better)
Translates to: QRKGDAGDRAQQ*QTWPALSQTWM
Trigger: CATCCAGGTCTGGGACAGTGCCGGCCATGTCTGTCACTGCTGAGCCCTGTCCCCAGCATCTCCTTTGCGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR GCA 72 bp TTCACCCCTACGAGAACTGGGCTCCGGGGAGGCAGCTaGCCTCCAGAGTTACACTCAGCAGCAGTGTGGTCA +
Preference number: 3 (lower is better)
Translates to: FTPTRTGLRGGS*PPELHSAAVWS
Trigger: TGACCACACTGCTGCTGAGTGTAACTCTGGAGGGCAGCTGCCTCCCCGGAGCCCAGTTCTCGTAGGGGTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
3UTR GCA 72 bp ACATGGCTGGCAAGGTTGTCCAGCACAGCCAACCCGTaGGGAGGAGATTCACCCCTACGAGAACTGGGCTCC +
Preference number: 3 (lower is better)
Translates to: TWLARLSSTANP*GGDSPLRELGS
Trigger: GGAGCCCAGTTCTCGTAGGGGTGAATCTCCTCCGCACGGGTTGGCTGTGCTGGACAACCTTGCCAGCCATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
3UTR CCA 72 bp CCCACACAAGCACAGGAGCGGGGCACATCACGGGCATaGGCAGGGCAGGTAGGTCGAGGGGTTATGAAATGT +
Preference number: 3 (lower is better)
Translates to: PTQAQERGTSRA*AGQVGRGVMKC
Trigger: ACATTTCATAACCCCTCGACCTACCTGCCCTGCCCATGCCCGTGATGTGCCCCGCTCCTGTGCTTGTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR-3UTR CAA 90 bp AACGCAAAGGAGATGCTGGGGACAGGGCTCAGCAGTGACAGACATGGCCGGCACCCTCTGTGTGGCATGTaGGGCTTCCAAGGCAGGAGT +
Preference number: 3 (lower is better)
Translates to: NAKEMLGTGLSSDRHGRHPLCGM*GFQGRS
Trigger: ACTCCTGCCTTGGAAGCCCAACATGCCACACAGAGG...GTGCCGGCCATGTCTGTCACTGCTGAGCCCTGTCCCCAGCATCTCCTTTGCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR TCA 72 bp CGGAAGACATGTGGCTCTGATGTGGTCTGCTGTGTCTaGCAGTGGGTATGGAGCTGGGGACCTGACCTGGCC +
Preference number: 3 (lower is better)
Translates to: RKTCGSDVVCCV*QWVWSWGPDLA
Trigger: GGCCAGGTCAGGTCCCCAGCTCCATACCCACTGTCAGACACAGCAGACCACATCAGAGCCACATGTCTTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR CCA 72 bp GAGCAGACTGGCGTGGAGCCACTGCACTCCCGGCTGTaGGGACTCTGGAAGGAGAAATCCAGTTGTTCAAGG +
Preference number: 3 (lower is better)
Translates to: EQTGVEPLHSRL*GLWKEKSSCSR
Trigger: CCTTGAACAACTGGATTTCTCCTTCCAGAGTCCCCACAGCCGGGAGTGCAGTGGCTCCACGCCAGTCTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR-3UTR CAA 90 bp CATGAGGCCATGACTGAGCCCCGCCACCATGTGAGTGAGCCACCAGCCCTGCTACCACTGTCCCTAGCTTaGTGCCCAATACAGCTCTGT +
Preference number: 3 (lower is better)
Translates to: HEAMTEPRHHVSEPPALLPLSLA*CPIQLC
Trigger: ACAGAGCTGTATTGGGCACAAAGCTAGGGACAGTGG...TAGCAGGGCTGGTGGCTCACTCACATGGTGGCGGGGCTCAGTCATGGCCTCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR TCA 72 bp CTGCTGTGTCTGACAGTGGGTATGGAGCTGGGGACCTaGCCTGGCCCTAATTGGAACAAGGGTCACAGGGTC +
Preference number: 3 (lower is better)
Translates to: LLCLTVGMELGT*PGPNWNKGHRV
Trigger: GACCCTGTGACCCTTGTTCCAATTAGGGCCAGGTCAGGTCCCCAGCTCCATACCCACTGTCAGACACAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR TCA 72 bp CTTTTGGGCCTAGCATGGAGGAGGCCATGTGATCTGTaGAGAGCCTGCCGCCACAGCTCTCCATGCACATGG +
Preference number: 3 (lower is better)
Translates to: LLGLAWRRPCDL*RACRHSSPCTW
Trigger: CCATGTGCATGGAGAGCTGTGGCGGCAGGCTCTTCACAGATCACATGGCCTCCTCCATGCTAGGCCCAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
3UTR TCA 72 bp GAAGCAGCTTTTGGGCCTAGCATGGAGGAGGCCATGTaGTCTGTGAAGAGCCTGCCGCCACAGCTCTCCATG +
Preference number: 3 (lower is better)
Translates to: EAAFGPSMEEAM*SVKSLPPQLSM
Trigger: CATGGAGAGCTGTGGCGGCAGGCTCTTCACAGATCACATGGCCTCCTCCATGCTAGGCCCAAAAGCTGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
3UTR-3UTR CAA 90 bp CAAAGGAGATGCTGGGGACAGGGCTCAGCAGTGACAGACATGGCCGGCACTGTCCCTGTGGCTGAAGCTTaGATAAGGGGAAGTTGTGAA +
Preference number: 3 (lower is better)
Translates to: QRRCWGQGSAVTDMAGTVPVAEA*IRGSCE
Trigger: TTCACAACTTCCCCTTATCAAAGCTTCAGCCACAGG...GACAGTGCCGGCCATGTCTGTCACTGCTGAGCCCTGTCCCCAGCATCTCCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR-3UTR CAA 90 bp CTATTGACCTTATTCTCAACGCAAAGGAGATGCTGGGGACAGGGCTCAGCAGTGCAGGCAGGCCCATCCTaGGAGTGTCTGGATGCAGAG +
Preference number: 3 (lower is better)
Translates to: LLTLFSTQRRCWGQGSAVQAGPS*ECLDAE
Trigger: CTCTGCATCCAGACACTCCAAGGATGGGCCTGCCTG...CACTGCTGAGCCCTGTCCCCAGCATCTCCTTTGCGTTGAGAATAAGGTCAATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR TCA 72 bp ATTCCTAATCTGAAACCCTGCTCCTACAATTCACTCTaGCTCCAGCCCTGGGAGCCACCCGCTCTGCTCCCT +
Preference number: 3 (lower is better)
Translates to: IPNLKPCSYNSL*LQPWEPPALLP
Trigger: AGGGAGCAGAGCGGGTGGCTCCCAGGGCTGGAGTCAGAGTGAATTGTAGGAGCAGGGTTTCAGATTAGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR TCA 72 bp CATCTTGCCAAGCTAAGCCAGGAAGTTCTCGAGAACTaGACCGAGGCACTGAACCGACCCTCTGTGGCACAC +
Preference number: 3 (lower is better)
Translates to: HLAKLSQEVLEN*TEALNRPSVAH
Trigger: GTGTGCCACAGAGGGTCGGTTCAGTGCCTCGGTTCAGTTCTCGAGAACTTCCTGGCTTAGCTTGGCAAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
3UTR GCA 72 bp TTAAAACCATCTCAGAGCAGACTGGCGTGGAGCCACTaGACTCCCGGCTGTGGGGACTCTGGAAGGAGAAAT +
Preference number: 3 (lower is better)
Translates to: LKPSQSRLAWSH*TPGCGDSGRRN
Trigger: ATTTCTCCTTCCAGAGTCCCCACAGCCGGGAGTGCAGTGGCTCCACGCCAGTCTGCTCTGAGATGGTTTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR TCA 72 bp CCCTCTGTGTGGCATGTTGGGCTTCCAAGGCAGGAGTaGGACTGCCTGCCAGATTCACTCAGTATCAACAAG +
Preference number: 3 (lower is better)
Translates to: PSVWHVGLPRQE*DCLPDSLSINK
Trigger: CTTGTTGATACTGAGTGAATCTGGCAGGCAGTCTCACTCCTGCCTTGGAAGCCCAACATGCCACACAGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR TCA 72 bp AGTGGCCTGCCTAGGGACCATAGAAACATCTCAGTGTaGACCTGGGGTTCTCATGTGGCACCCACACAAGCA +
Preference number: 3 (lower is better)
Translates to: SGLPRDHRNISV*TWGSHVAPTQA
Trigger: TGCTTGTGTGGGTGCCACATGAGAACCCCAGGTTCACACTGAGATGTTTCTATGGTCCCTAGGCAGGCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR GCA 72 bp GGCATGTTGGGCTTCCAAGGCAGGAGTGAGACTGCCTaGCAGATTCACTCAGTATCAACAAGTTCCCTGTGG +
Preference number: 3 (lower is better)
Translates to: GMLGFQGRSETA*QIHSVSTSSLW
Trigger: CCACAGGGAACTTGTTGATACTGAGTGAATCTGGCAGGCAGTCTCACTCCTGCCTTGGAAGCCCAACATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR CCA 72 bp TGGGGGTTGAATAGGAGCCCTGTATCTTGTGGTACCTaGAACGCTCTACAGGAAACCTGCTCCCACAGAAGG +
Preference number: 3 (lower is better)
Translates to: WGLNRSPVSCGT*NALQETCSHRR
Trigger: CCTTCTGTGGGAGCAGGTTTCCTGTAGAGCGTTCCAGGTACCACAAGATACAGGGCTCCTATTCAACCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR CCA 72 bp TTCCTGTCTGTAGAGAATTACAATGCTATTAGTGGGTaGGGCACTGCCCAGAGGCCCAGCTGCTCTCTGAGG +
Preference number: 3 (lower is better)
Translates to: FLSVENYNAISG*GTAQRPSCSLR
Trigger: CCTCAGAGAGCAGCTGGGCCTCTGGGCAGTGCCCCACCCACTAATAGCATTGTAATTCTCTACAGACAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR TCA 72 bp TGCTGGAAGCCTTCTAGCAGGGATGGATGGTGGCCCTaGTTCTTACAGAGCAGCTTCATGGGACATGTATGC +
Preference number: 3 (lower is better)
Translates to: CWKPSSRDGWWP*FLQSSFMGHVC
Trigger: GCATACATGTCCCATGAAGCTGCTCTGTAAGAATCAGGGCCACCATCCATCCCTGCTAGAAGGCTTCCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR GCA 72 bp CTGACACGGTTATGTCAAGGCTTTAAGTGGAATGCTTaGTGGAAGCCTTCTAGCAGGGATGGATGGTGGCCC +
Preference number: 3 (lower is better)
Translates to: LTRLCQGFKWNA*WKPSSRDGWWP
Trigger: GGGCCACCATCCATCCCTGCTAGAAGGCTTCCAGCAAGCATTCCACTTAAAGCCTTGACATAACCGTGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR CCA 72 bp GAGTTCCAGTGGGTTGAACCAATGCCAAATGCATGCTaGGAAAAAGACACTGGTTCAGCAGGGTGTCCGCCA +
Preference number: 3 (lower is better)
Translates to: EFQWVEPMPNAC*EKDTGSAGCPP
Trigger: TGGCGGACACCCTGCTGAACCAGTGTCTTTTTCCCAGCATGCATTTGGCATTGGTTCAACCCACTGGAACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR CCA 72 bp GAAGGAGAAATCCAGTTGTTCAAGGAGGAACAGCGGTaGCTGAAGCTTAGGAAGCCCAGGGTCCAGAACTGT +
Preference number: 3 (lower is better)
Translates to: EGEIQLFKEEQR*LKLRKPRVQNC
Trigger: ACAGTTCTGGACCCTGGGCTTCCTAAGCTTCAGCCACCGCTGTTCCTCCTTGAACAACTGGATTTCTCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR CCA 72 bp TTTGGCATTTGTCCAGCCTTTCTGACACTAAAGACATaGCTGGCAAGGTTGTCCAGCACAGCCAACCCGTGC +
Preference number: 3 (lower is better)
Translates to: FGICPAFLTLKT*LARLSSTANPC
Trigger: GCACGGGTTGGCTGTGCTGGACAACCTTGCCAGCCATGTCTTTAGTGTCAGAAAGGCTGGACAAATGCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
3UTR-3UTR CAA 90 bp TTATTAGTACACATCAAGTGGGCTCGCTCTGCCAAGGAGGCATTTCCTACATCACAGGCAGGCCCATCCTaGGAGTGTCTGGATGCAGAG +
Preference number: 3 (lower is better)
Translates to: LLVHIKWARSAKEAFPTSQAGPS*ECLDAE
Trigger: CTCTGCATCCAGACACTCCAAGGATGGGCCTGCCTG...TGATGTAGGAAATGCCTCCTTGGCAGAGCGAGCCCACTTGATGTGTACTAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
3UTR-3UTR CAA 90 bp GTCAAGGCTTTAAGTGGAATGCTTGCTGGAAGCCTTCTAGCAGGGATGGATGGTCCACTGTCCCTAGCTTaGTGCCCAATACAGCTCTGT +
Preference number: 3 (lower is better)
Translates to: VKALSGMLAGSLLAGMDGPLSLA*CPIQLC
Trigger: ACAGAGCTGTATTGGGCACAAAGCTAGGGACAGTGG...ACCATCCATCCCTGCTAGAAGGCTTCCAGCAAGCATTCCACTTAAAGCCTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR TCA 72 bp CCCATCCTTGGAGTGTCTGGATGCAGAGTTTACAGCTaGGCTCCAAGAATAGGGTGTTGGGGGTTGAATAGG +
Preference number: 3 (lower is better)
Translates to: PILGVSGCRVYS*APRIGCWGLNR
Trigger: CCTATTCAACCCCCAACACCCTATTCTTGGAGCTCAGCTGTAAACTCTGCATCCAGACACTCCAAGGATGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR TCA 72 bp CATGGGACATGTATGCAAGCAGGCTCCTCAGAATGCTaGGAAGACTGGTCAGAGGCAGGGGGTAGAATTCAT +
Preference number: 3 (lower is better)
Translates to: HGTCMQAGSSEC*EDWSEAGGRIH
Trigger: ATGAATTCTACCCCCTGCCTCTGACCAGTCTTCTCAGCATTCTGAGGAGCCTGCTTGCATACATGTCCCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR TCA 72 bp GAGAAATCCAGTTGTTCAAGGAGGAACAGCGGTGGCTaGAGCTTAGGAAGCCCAGGGTCCAGAACTGTATTT +
Preference number: 3 (lower is better)
Translates to: EKSSCSRRNSGG*SLGSPGSRTVF
Trigger: AAATACAGTTCTGGACCCTGGGCTTCCTAAGCTTCAGCCACCGCTGTTCCTCCTTGAACAACTGGATTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR GCA 72 bp AAAGAGTTCCAGTGGGTTGAACCAATGCCAAATGCATaGTGGGAAAAAGACACTGGTTCAGCAGGGTGTCCG +
Preference number: 3 (lower is better)
Translates to: KEFQWVEPMPNA*WEKDTGSAGCP
Trigger: CGGACACCCTGCTGAACCAGTGTCTTTTTCCCAGCATGCATTTGGCATTGGTTCAACCCACTGGAACTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR GCA 72 bp AGTTATCTATTGACCTTATTCTCAACGCAAAGGAGATaGTGGGGACAGGGCTCAGCAGTGACAGACATGGCC +
Preference number: 3 (lower is better)
Translates to: SYLLTLFSTQRR*WGQGSAVTDMA
Trigger: GGCCATGTCTGTCACTGCTGAGCCCTGTCCCCAGCATCTCCTTTGCGTTGAGAATAAGGTCAATAGATAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR GCA 72 bp CTTTCCATCCTTGGTTCTTCCAAGGAGAGAGTGGCCTaGCTAGGGACCATAGAAACATCTCAGTGTGAACCT +
Preference number: 3 (lower is better)
Translates to: LSILGSSKERVA*LGTIETSQCEP
Trigger: AGGTTCACACTGAGATGTTTCTATGGTCCCTAGGCAGGCCACTCTCTCCTTGGAAGAACCAAGGATGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR-3UTR CAA 90 bp TCTATTGACCTTATTCTCAACGCAAAGGAGATGCTGGGGACAGGGCTCAGCAGTCCTGTGGCTGAAGCTTaGATAAGGGGAAGTTGTGAA +
Preference number: 3 (lower is better)
Translates to: SIDLILNAKEMLGTGLSSPVAEA*IRGSCE
Trigger: TTCACAACTTCCCCTTATCAAAGCTTCAGCCACAGG...ACTGCTGAGCCCTGTCCCCAGCATCTCCTTTGCGTTGAGAATAAGGTCAATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR GCA 72 bp TTCAAGTTGCAGTTAGTGCAGAGCAGAAGGTCATCTTaGCAAGCTAAGCCAGGAAGTTCTCGAGAACTGAAC +
Preference number: 3 (lower is better)
Translates to: FKLQLVQSRRSS*QAKPGSSRELN
Trigger: GTTCAGTTCTCGAGAACTTCCTGGCTTAGCTTGGCAAGATGACCTTCTGCTCTGCACTAACTGCAACTTGAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
3UTR CCA 72 bp TCTAAGGTACTGACACGGTTATGTCAAGGCTTTAAGTaGAATGCTTGCTGGAAGCCTTCTAGCAGGGATGGA +
Preference number: 3 (lower is better)
Translates to: SKVLTRLCQGFK*NACWKPSSRDG
Trigger: TCCATCCCTGCTAGAAGGCTTCCAGCAAGCATTCCACTTAAAGCCTTGACATAACCGTGTCAGTACCTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR GCA 72 bp CCTCTTTTTGTAAAGAGTTCCAGTGGGTTGAACCAATaGCAAATGCATGCTGGGAAAAAGACACTGGTTCAG +
Preference number: 3 (lower is better)
Translates to: PLFVKSSSGLNQ*QMHAGKKTLVQ
Trigger: CTGAACCAGTGTCTTTTTCCCAGCATGCATTTGGCATTGGTTCAACCCACTGGAACTCTTTACAAAAAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR CCA 72 bp CAAACAGTAATGGGTCAGCCTATCATCTTCTTGGCCTaGTGGGTAGCCAGTGATAGTTATCTATTGACCTTA +
Preference number: 3 (lower is better)
Translates to: QTVMGQPIIFLA*WVASDSYLLTL
Trigger: TAAGGTCAATAGATAACTATCACTGGCTACCCACCAGGCCAAGAAGATGATAGGCTGACCCATTACTGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR CCA 72 bp GCAACCTGTACTGAACAGCAGGTTATACTAGAGTTTTaGCATTTGTCCAGCCTTTCTGACACTAAAGACATG +
Preference number: 3 (lower is better)
Translates to: ATCTEQQVILEF*HLSSLSDTKDM
Trigger: CATGTCTTTAGTGTCAGAAAGGCTGGACAAATGCCAAAACTCTAGTATAACCTGCTGTTCAGTACAGGTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
3UTR TCA 72 bp GATCAGTCAATACTTCCCACACTAGATCTAAGGTACTaGCACGGTTATGTCAAGGCTTTAAGTGGAATGCTT +
Preference number: 3 (lower is better)
Translates to: DQSILPTLDLRY*HGYVKALSGML
Trigger: AAGCATTCCACTTAAAGCCTTGACATAACCGTGTCAGTACCTTAGATCTAGTGTGGGAAGTATTGACTGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR CCA 72 bp AGAAGCATAGTTGCCTCTTTTTGTAAAGAGTTCCAGTaGGTTGAACCAATGCCAAATGCATGCTGGGAAAAA +
Preference number: 3 (lower is better)
Translates to: RSIVASFCKEFQ*VEPMPNACWEK
Trigger: TTTTTCCCAGCATGCATTTGGCATTGGTTCAACCCACTGGAACTCTTTACAAAAAGAGGCAACTATGCTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR TCA 90 bp GGGAAGGGAGATGGCACTGGCCGGTGCAGGGCCACAGGTGCTCCCCGCTTTGTCGCACCCTGGCATCTCTaGAGAGGCCTGCTTGGCGGC +
Preference number: 4 (lower is better)
Translates to: GKGDGTGRCRATGAPRFVAPWHL*RGLLGG
Trigger: GCCGCCAAGCAGGCCTCTTCAGAGATGCCAGGGTGC...GACAAAGCGGGGAGCACCTGTGGCCCTGCACCGGCCAGTGCCATCTCCCTTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
CDS-3UTR TCA 90 bp TCCAGCCCTGGGAGCCACCCGCTCTGCTCCCTCTGTGTGGCATGTTGGGCTTCCGAGGTGGAGAGCCAGTaGATTCTCTTCCCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: SSPGSHPLCSLCVACWASEVESQ*ILFPQA
Trigger: TGCCTGGGGGAAGAGAATTCACTGGCTCTCCACCTC...GGAAGCCCAACATGCCACACAGAGGGAGCAGAGCGGGTGGCTCCCAGGGCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR GCA 90 bp GGGAAGGGAGATGGCACTGGCCGGTGCAGGGCCACAGGTGCTCCCCGCTTTGTCGCTTCCAGCAAATGCTaGGGAACCTGCTGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: GKGDGTGRCRATGAPRFVASSKC*GTCCFS
Trigger: TGAGAAGCAGCAGGTTCCGCAGCATTTGCTGGAAGC...GACAAAGCGGGGAGCACCTGTGGCCCTGCACCGGCCAGTGCCATCTCCCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
CDS-3UTR GCA 90 bp GGAGCCACCCGCTCTGCTCCCTCTGTGTGGCATGTTGGGCTTCCAAGGCAGGAGACCACCAGCAGGTCCTaGAGAGGGAACTCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: GATRSAPSVWHVGLPRQETTSRS*RGNSLP
Trigger: TGGCAGAGAGTTCCCTCTGCAGGACCTGCTGGTGGT...CTCCTGCCTTGGAAGCCCAACATGCCACACAGAGGGAGCAGAGCGGGTGGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR GCA 90 bp GGGAAGGGAGATGGCACTGGCCGGTGCAGGGCCACAGGTGCTCCCCGCTTTGTCTCCTGCCCATGGTTTTaGTGTGTGAACGGGAACGTG +
Preference number: 4 (lower is better)
Translates to: GKGDGTGRCRATGAPRFVSCPWF*CVNGNV
Trigger: CACGTTCCCGTTCACACAGCAAAACCATGGGCAGGA...GACAAAGCGGGGAGCACCTGTGGCCCTGCACCGGCCAGTGCCATCTCCCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
CDS-3UTR CCA 90 bp CAAAGGAGATGCTGGGGACAGGGCTCAGCAGTGACAGACATGGCCGGCACTGTCCAGTGGGGAGCAGGCTaGGGCTCGGCTTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: QRRCWGQGSAVTDMAGTVQWGAG*GSAFPR
Trigger: TCTGGGAAAAGCCGAGCCCCAGCCTGCTCCCCACTG...GACAGTGCCGGCCATGTCTGTCACTGCTGAGCCCTGTCCCCAGCATCTCCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR GCA 90 bp CAAAGGAGATGCTGGGGACAGGGCTCAGCAGTGACAGACATGGCCGGCACTGTCGCAGAGGGAACTCTCTaGCAAACAGCAGCCGCACCC +
Preference number: 4 (lower is better)
Translates to: QRRCWGQGSAVTDMAGTVAEGTL*QTAAAP
Trigger: GGGTGCGGCTGCTGTTTGGCAGAGAGTTCCCTCTGC...GACAGTGCCGGCCATGTCTGTCACTGCTGAGCCCTGTCCCCAGCATCTCCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CCA 90 bp CCACCCGCTCTGCTCCCTCTGTGTGGCATGTTGGGCTTCCAAGGCAGGAGTGAGATCATCAGATCCTGCTaGCCGGCAGCCTTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: PPALLPLCGMLGFQGRSEIIRSC*PAAFLG
Trigger: CCCAAGGAAGGCTGCCGGCCAGCAGGATCTGATGAT...CTCACTCCTGCCTTGGAAGCCCAACATGCCACACAGAGGGAGCAGAGCGGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CCA 90 bp CCACCCGCTCTGCTCCCTCTGTGTGGCATGTTGGGCTTCCAAGGCAGGAGTGAGCTTCTGTGGAGGTCCTaGTGGGGATGGCAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: PPALLPLCGMLGFQGRSELLWRS*WGWQQR
Trigger: TCTCTGCTGCCATCCCCACCAGGACCTCCACAGAAG...CTCACTCCTGCCTTGGAAGCCCAACATGCCACACAGAGGGAGCAGAGCGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CCA 90 bp AACGCAAAGGAGATGCTGGGGACAGGGCTCAGCAGTGACAGACATGGCCGGCACGCCTCCAGCTGGCTCTaGTTGAAGCGCAGGGAACCT +
Preference number: 4 (lower is better)
Translates to: NAKEMLGTGLSSDRHGRHASSWL*LKRREP
Trigger: AGGTTCCCTGCGCTTCAACCAGAGCCAGCTGGAGGC...GTGCCGGCCATGTCTGTCACTGCTGAGCCCTGTCCCCAGCATCTCCTTTGCGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR TCA 90 bp AACGCAAAGGAGATGCTGGGGACAGGGCTCAGCAGTGACAGACATGGCCGGCACCATACTGCCCGGAGCTaGGGCTGGGGAAATCAGCTT +
Preference number: 4 (lower is better)
Translates to: NAKEMLGTGLSSDRHGRHHTARS*GWGNQL
Trigger: AAGCTGATTTCCCCAGCCTCAGCTCCGGGCAGTATG...GTGCCGGCCATGTCTGTCACTGCTGAGCCCTGTCCCCAGCATCTCCTTTGCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR TCA 90 bp GGGAAGGGAGATGGCACTGGCCGGTGCAGGGCCACAGGTGCTCCCCGCTTTGTCCAAGATGCATGTCCATaGCCTTTGCACAGTACTTGC +
Preference number: 4 (lower is better)
Translates to: GKGDGTGRCRATGAPRFVQDACP*PLHSTC
Trigger: GCAAGTACTGTGCAAAGGTCATGGACATGCATCTTG...GACAAAGCGGGGAGCACCTGTGGCCCTGCACCGGCCAGTGCCATCTCCCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
CDS-3UTR TCA 90 bp CAAAGGAGATGCTGGGGACAGGGCTCAGCAGTGACAGACATGGCCGGCACTGTCCCAGCTGGCTCTGGTTaGAGCGCAGGGAACCTTTCA +
Preference number: 4 (lower is better)
Translates to: QRRCWGQGSAVTDMAGTVPAGSG*SAGNLS
Trigger: TGAAAGGTTCCCTGCGCTTCAACCAGAGCCAGCTGG...GACAGTGCCGGCCATGTCTGTCACTGCTGAGCCCTGTCCCCAGCATCTCCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR TCA 90 bp ACTGCACTCCCGGCTGTGGGGACTCTGGAAGGAGAAATCCAGTTGTTCAAGGAGGCACCCTGGCATCTCTaGAGAGGCCTGCTTGGCGGC +
Preference number: 4 (lower is better)
Translates to: TALPAVGTLEGEIQLFKEAPWHL*RGLLGG
Trigger: GCCGCCAAGCAGGCCTCTTCAGAGATGCCAGGGTGC...CTCCTTGAACAACTGGATTTCTCCTTCCAGAGTCCCCACAGCCGGGAGTGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR TCA 90 bp CAAAGGAGATGCTGGGGACAGGGCTCAGCAGTGACAGACATGGCCGGCACTGTCAGGGGCTCACAATGGTaGAGCCAGACTCCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: QRRCWGQGSAVTDMAGTVRGSQW*SQTPCC
Trigger: GCAGCAAGGAGTCTGGCTTCACCATTGTGAGCCCCT...GACAGTGCCGGCCATGTCTGTCACTGCTGAGCCCTGTCCCCAGCATCTCCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR GCA 90 bp AACGCAAAGGAGATGCTGGGGACAGGGCTCAGCAGTGACAGACATGGCCGGCACAGCCAGACTCCTTGCTaGTGTCATCATCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: NAKEMLGTGLSSDRHGRHSQTPC*CHHRGW
Trigger: CCAGCCCCGATGATGACAGCAGCAAGGAGTCTGGCT...GTGCCGGCCATGTCTGTCACTGCTGAGCCCTGTCCCCAGCATCTCCTTTGCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CCA 90 bp CAAAGGAGATGCTGGGGACAGGGCTCAGCAGTGACAGACATGGCCGGCACTGTCATCATCAGATCCTGCTaGCCGGCAGCCTTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: QRRCWGQGSAVTDMAGTVIIRSC*PAAFLG
Trigger: CCCAAGGAAGGCTGCCGGCCAGCAGGATCTGATGAT...GACAGTGCCGGCCATGTCTGTCACTGCTGAGCCCTGTCCCCAGCATCTCCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CCA 90 bp TCCAGCCCTGGGAGCCACCCGCTCTGCTCCCTCTGTGTGGCATGTTGGGCTTCCGTAAGTCGCCGGCCTTaGATTTCTCTTTGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: SSPGSHPLCSLCVACWASVSRRP*ISLWVS
Trigger: AGAGACCCAAAGAGAAATCCAAGGCCGGCGACTTAC...GGAAGCCCAACATGCCACACAGAGGGAGCAGAGCGGGTGGCTCCCAGGGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CCA 90 bp CCACTGCACTCCCGGCTGTGGGGACTCTGGAAGGAGAAATCCAGTTGTTCAAGGGCCTTGGGGCTTCTGTaGAGGTCCTGGTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: PLHSRLWGLWKEKSSCSRALGLL*RSWWGW
Trigger: CCATCCCCACCAGGACCTCCACAGAAGCCCCAAGGC...CCTTGAACAACTGGATTTCTCCTTCCAGAGTCCCCACAGCCGGGAGTGCAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CCA 90 bp CCACTGCACTCCCGGCTGTGGGGACTCTGGAAGGAGAAATCCAGTTGTTCAAGGCAGTGGGGAGCAGGCTaGGGCTCGGCTTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: PLHSRLWGLWKEKSSCSRQWGAG*GSAFPR
Trigger: TCTGGGAAAAGCCGAGCCCCAGCCTGCTCCCCACTG...CCTTGAACAACTGGATTTCTCCTTCCAGAGTCCCCACAGCCGGGAGTGCAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR TCA 90 bp GAAGGGAGATGGCACTGGCCGGTGCAGGGCCACAGGTGCTCCCCGCTTTGTCTTAGAGTAGCATGGCTGTaGAGACATAGTCGACTAAGC +
Preference number: 4 (lower is better)
Translates to: EGRWHWPVQGHRCSPLCLRVAWL*RHSRLS
Trigger: GCTTAGTCGACTATGTCTTCACAGCCATGCTACTCT...AAGACAAAGCGGGGAGCACCTGTGGCCCTGCACCGGCCAGTGCCATCTCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
CDS-3UTR CCA 90 bp ACAGAAGGAACTCCAGGTCTAATTCCCAGGAGGTCTGACTCCGGGTTGTGCGAAGGAACTTGGCTGCCCTaGTCCTGGCCACTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: TEGTPGLIPRRSDSGLCEGTWLP*SWPLEQ
Trigger: CTGCTCCAGTGGCCAGGACCAGGGCAGCCAAGTTCC...TTCGCACAACCCGGAGTCAGACCTCCTGGGAATTAGACCTGGAGTTCCTTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR GCA 90 bp AACGCAAAGGAGATGCTGGGGACAGGGCTCAGCAGTGACAGACATGGCCGGCACCTGCTGCTTCTCAGCTaGCCATTAATCCCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: NAKEMLGTGLSSDRHGRHLLLLS*PLIPFC
Trigger: ACAGAAGGGGATTAATGGGCAGCTGAGAAGCAGCAG...GTGCCGGCCATGTCTGTCACTGCTGAGCCCTGTCCCCAGCATCTCCTTTGCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR GCA 90 bp AGGCAGGCCCATCCTTGGAGTGTCTGGATGCAGAGTTTACAGCTGAGCTCCAAGTGCTGGTGTTGCTGCTaGTGCTGCTGTGGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: RQAHPWSVWMQSLQLSSKCWCCC*CCCGCC
Trigger: GCAGCAACCACAGCAGCAGCAGCAGCAACACCAGCA...CTTGGAGCTCAGCTGTAAACTCTGCATCCAGACACTCCAAGGATGGGCCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CCA 90 bp GGAGCCACCCGCTCTGCTCCCTCTGTGTGGCATGTTGGGCTTCCAAGGCAGGAGTATGTCCCCGATGATTaGATAATGCATCAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: GATRSAPSVWHVGLPRQEYVPDD*IMHQKA
Trigger: GGCCTTCTGATGCATTATCCAATCATCGGGGACATA...CTCCTGCCTTGGAAGCCCAACATGCCACACAGAGGGAGCAGAGCGGGTGGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CCA 90 bp CAATGCCAAATGCATGCTGGGAAAAAGACACTGGTTCAGCAGGGTGTCCGCCAGGCCTCCAGCTGGCTCTaGTTGAAGCGCAGGGAACCT +
Preference number: 4 (lower is better)
Translates to: QCQMHAGKKTLVQQGVRQASSWL*LKRREP
Trigger: AGGTTCCCTGCGCTTCAACCAGAGCCAGCTGGAGGC...CTGGCGGACACCCTGCTGAACCAGTGTCTTTTTCCCAGCATGCATTTGGCATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR TCA 90 bp GAACAGCGGTGGCTGAAGCTTAGGAAGCCCAGGGTCCAGAACTGTATTTGTGTCGAGGTGGAGAGCCAGTaGATTCTCTTCCCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: EQRWLKLRKPRVQNCICVEVESQ*ILFPQA
Trigger: TGCCTGGGGGAAGAGAATTCACTGGCTCTCCACCTC...GACACAAATACAGTTCTGGACCCTGGGCTTCCTAAGCTTCAGCCACCGCTGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR GCA 90 bp CCACTGCACTCCCGGCTGTGGGGACTCTGGAAGGAGAAATCCAGTTGTTCAAGGAGAGCTTCCAGCAAATaGTGCGGAACCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: PLHSRLWGLWKEKSSCSRRASSK*CGTCCF
Trigger: GAAGCAGCAGGTTCCGCAGCATTTGCTGGAAGCTCT...CCTTGAACAACTGGATTTCTCCTTCCAGAGTCCCCACAGCCGGGAGTGCAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR GCA 90 bp CTATTGACCTTATTCTCAACGCAAAGGAGATGCTGGGGACAGGGCTCAGCAGTGGCAGAGGGAACTCTCTaGCAAACAGCAGCCGCACCC +
Preference number: 4 (lower is better)
Translates to: LLTLFSTQRRCWGQGSAVAEGTL*QTAAAP
Trigger: GGGTGCGGCTGCTGTTTGGCAGAGAGTTCCCTCTGC...CACTGCTGAGCCCTGTCCCCAGCATCTCCTTTGCGTTGAGAATAAGGTCAATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CCA 90 bp CATGAGGCCATGACTGAGCCCCGCCACCATGTGAGTGAGCCACCAGCCCTGCTACCTTGGATTTCTCTTTaGGTCTCTAAGGAACAGAGC +
Preference number: 4 (lower is better)
Translates to: HEAMTEPRHHVSEPPALLPWISL*VSKEQS
Trigger: GCTCTGTTCCTTAGAGACCCAAAGAGAAATCCAAGG...TAGCAGGGCTGGTGGCTCACTCACATGGTGGCGGGGCTCAGTCATGGCCTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CCA 90 bp TACAGAGCAGCTTCATGGGACATGTATGCAAGCAGGCTCCTCAGAATGCTGAGAGCCTTGGGGCTTCTGTaGAGGTCCTGGTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: YRAASWDMYASRLLRMLRALGLL*RSWWGW
Trigger: CCATCCCCACCAGGACCTCCACAGAAGCCCCAAGGC...TCTCAGCATTCTGAGGAGCCTGCTTGCATACATGTCCCATGAAGCTGCTCTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CCA 90 bp ACAGAAGGAACTCCAGGTCTAATTCCCAGGAGGTCTGACTCCGGGTTGTGCGAACCTGGTCCTGGCCACTaGAGCAGTAGTGGTCATCAG +
Preference number: 4 (lower is better)
Translates to: TEGTPGLIPRRSDSGLCEPGPGH*SSSGHQ
Trigger: CTGATGACCACTACTGCTCCAGTGGCCAGGACCAGG...TTCGCACAACCCGGAGTCAGACCTCCTGGGAATTAGACCTGGAGTTCCTTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CCA 90 bp GTTGAACCAATGCCAAATGCATGCTGGGAAAAAGACACTGGTTCAGCAGGGTGTGCGGCCCTAGGAACTTaGCTGCCCTGGTCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: VEPMPNACWEKDTGSAGCAALGT*LPWSWP
Trigger: TGGCCAGGACCAGGGCAGCCAAGTTCCTAGGGCCGC...ACACCCTGCTGAACCAGTGTCTTTTTCCCAGCATGCATTTGGCATTGGTTCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR CAA 72 bp CCAGCCTTTCTGACACTAAAGACATGGCTGGCAAGGTaGTCCAGCACAGCCAACCCGTGCGGAGGAGATTCA +
Preference number: 4 (lower is better)
Translates to: PAFLTLKTWLAR*SSTANPCGGDS
Trigger: TGAATCTCCTCCGCACGGGTTGGCTGTGCTGGACAACCTTGCCAGCCATGTCTTTAGTGTCAGAAAGGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
CDS-3UTR TCA 90 bp CCACCCGCTCTGCTCCCTCTGTGTGGCATGTTGGGCTTCCAAGGCAGGAGTGAGAGTGTATGTCCCCGATaGTTGGATAATGCATCAGAA +
Preference number: 4 (lower is better)
Translates to: PPALLPLCGMLGFQGRSESVCPR*LDNASE
Trigger: TTCTGATGCATTATCCAATCATCGGGGACATACACT...CTCACTCCTGCCTTGGAAGCCCAACATGCCACACAGAGGGAGCAGAGCGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR GCA 90 bp GGAGCCACCCGCTCTGCTCCCTCTGTGTGGCATGTTGGGCTTCCAAGGCAGGAGGTTCTTTTGACATCTTaGTCAATCATGGACCGTAGT +
Preference number: 4 (lower is better)
Translates to: GATRSAPSVWHVGLPRQEVLLTS*SIMDRS
Trigger: ACTACGGTCCATGATTGAGCAAGATGTCAAAAGAAC...CTCCTGCCTTGGAAGCCCAACATGCCACACAGAGGGAGCAGAGCGGGTGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CCA 90 bp GCCACTGCACTCCCGGCTGTGGGGACTCTGGAAGGAGAAATCCAGTTGTTCAAGTTTTCATTTCCTCACTaGGCTGTGCAGACTCGCTGG +
Preference number: 4 (lower is better)
Translates to: ATALPAVGTLEGEIQLFKFSFPH*AVQTRW
Trigger: CCAGCGAGTCTGCACAGCCCAGTGAGGAAATGAAAA...CTTGAACAACTGGATTTCTCCTTCCAGAGTCCCCACAGCCGGGAGTGCAGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CCA 90 bp GGAGCCACCCGCTCTGCTCCCTCTGTGTGGCATGTTGGGCTTCCAAGGCAGGAGTTCAGTAGATGGTCCTaGATCTGGTTGACTTTTGTA +
Preference number: 4 (lower is better)
Translates to: GATRSAPSVWHVGLPRQEFSRWS*IWLTFV
Trigger: TACAAAAGTCAACCAGATCCAGGACCATCTACTGAA...CTCCTGCCTTGGAAGCCCAACATGCCACACAGAGGGAGCAGAGCGGGTGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CCA 90 bp CCACTGCACTCCCGGCTGTGGGGACTCTGGAAGGAGAAATCCAGTTGTTCAAGGGTAAGTCGCCGGCCTTaGATTTCTCTTTGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: PLHSRLWGLWKEKSSCSRVSRRP*ISLWVS
Trigger: AGAGACCCAAAGAGAAATCCAAGGCCGGCGACTTAC...CCTTGAACAACTGGATTTCTCCTTCCAGAGTCCCCACAGCCGGGAGTGCAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CCA 90 bp CCTGTATCTTGTGGTACCTGGAACGCTCTACAGGAAACCTGCTCCCACAGAAGGTCAGGGGAGCACCTCTaGCATTGGTCCGGCTTTTGT +
Preference number: 4 (lower is better)
Translates to: PVSCGTWNALQETCSHRRSGEHL*HWSGFC
Trigger: ACAAAAGCCGGACCAATGCCAGAGGTGCTCCCCTGA...CCTTCTGTGGGAGCAGGTTTCCTGTAGAGCGTTCCAGGTACCACAAGATACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR TCA 90 bp GGAGCCACCCGCTCTGCTCCCTCTGTGTGGCATGTTGGGCTTCCAAGGCAGGAGTCCTCTTGTTTTATTTaGATAACTGAACAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: GATRSAPSVWHVGLPRQESSCFI*ITEQGV
Trigger: GACCCCTTGTTCAGTTATTCAAATAAAACAAGAGGA...CTCCTGCCTTGGAAGCCCAACATGCCACACAGAGGGAGCAGAGCGGGTGGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR TCA 90 bp AACGCAAAGGAGATGCTGGGGACAGGGCTCAGCAGTGACAGACATGGCCGGCACCAGGAAACGTTCTTTTaGCATCTTGCTCAATCATGG +
Preference number: 4 (lower is better)
Translates to: NAKEMLGTGLSSDRHGRHQETFF*HLAQSW
Trigger: CCATGATTGAGCAAGATGTCAAAAGAACGTTTCCTG...GTGCCGGCCATGTCTGTCACTGCTGAGCCCTGTCCCCAGCATCTCCTTTGCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR TCA 90 bp GAGATTCACCCCTACGAGAACTGGGCTCCGGGGAGGCAGCTGCCCTCCAGAGTTGTTTCTTTTCCCTTTTaGCCATCATGCTCAAACGTA +
Preference number: 4 (lower is better)
Translates to: EIHPYENWAPGRQLPSRVVSFPF*PSCSNV
Trigger: TACGTTTGAGCATGATGGTCAAAAGGGAAAAGAAAC...AACTCTGGAGGGCAGCTGCCTCCCCGGAGCCCAGTTCTCGTAGGGGTGAATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
CDS-3UTR TCA 90 bp AGAGCAGCTTCATGGGACATGTATGCAAGCAGGCTCCTCAGAATGCTGAGAAGACATACTGCCCGGAGCTaGGGCTGGGGAAATCAGCTT +
Preference number: 4 (lower is better)
Translates to: RAASWDMYASRLLRMLRRHTARS*GWGNQL
Trigger: AAGCTGATTTCCCCAGCCTCAGCTCCGGGCAGTATG...TCTTCTCAGCATTCTGAGGAGCCTGCTTGCATACATGTCCCATGAAGCTGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR TCA 90 bp AGAGCAGCTTCATGGGACATGTATGCAAGCAGGCTCCTCAGAATGCTGAGAAGACCAGCTGGCTCTGGTTaGAGCGCAGGGAACCTTTCA +
Preference number: 4 (lower is better)
Translates to: RAASWDMYASRLLRMLRRPAGSG*SAGNLS
Trigger: TGAAAGGTTCCCTGCGCTTCAACCAGAGCCAGCTGG...TCTTCTCAGCATTCTGAGGAGCCTGCTTGCATACATGTCCCATGAAGCTGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR TCA 90 bp TACAGAGCAGCTTCATGGGACATGTATGCAAGCAGGCTCCTCAGAATGCTGAGAAGGGGCTCACAATGGTaGAGCCAGACTCCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: YRAASWDMYASRLLRMLRRGSQW*SQTPCC
Trigger: GCAGCAAGGAGTCTGGCTTCACCATTGTGAGCCCCT...TCTCAGCATTCTGAGGAGCCTGCTTGCATACATGTCCCATGAAGCTGCTCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR GCA 90 bp TCTATTGACCTTATTCTCAACGCAAAGGAGATGCTGGGGACAGGGCTCAGCAGTACCACCAGCAGGTCCTaGAGAGGGAACTCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: SIDLILNAKEMLGTGLSSTTSRS*RGNSLP
Trigger: TGGCAGAGAGTTCCCTCTGCAGGACCTGCTGGTGGT...ACTGCTGAGCCCTGTCCCCAGCATCTCCTTTGCGTTGAGAATAAGGTCAATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR GCA 90 bp CCACTGCACTCCCGGCTGTGGGGACTCTGGAAGGAGAAATCCAGTTGTTCAAGGCATGTCCATGACCTTTaGACAGTACTTGCACATGGC +
Preference number: 4 (lower is better)
Translates to: PLHSRLWGLWKEKSSCSRHVHDL*TVLAHG
Trigger: GCCATGTGCAAGTACTGTGCAAAGGTCATGGACATG...CCTTGAACAACTGGATTTCTCCTTCCAGAGTCCCCACAGCCGGGAGTGCAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CCA 90 bp CCACCCGCTCTGCTCCCTCTGTGTGGCATGTTGGGCTTCCAAGGCAGGAGTGAGTTCAGTAGATGGTCCTaGATCTGGTTGACTTTTGTA +
Preference number: 4 (lower is better)
Translates to: PPALLPLCGMLGFQGRSEFSRWS*IWLTFV
Trigger: TACAAAAGTCAACCAGATCCAGGACCATCTACTGAA...CTCACTCCTGCCTTGGAAGCCCAACATGCCACACAGAGGGAGCAGAGCGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CCA 90 bp CTATTGACCTTATTCTCAACGCAAAGGAGATGCTGGGGACAGGGCTCAGCAGTGTCAGGGGAGCACCTCTaGCATTGGTCCGGCTTTTGT +
Preference number: 4 (lower is better)
Translates to: LLTLFSTQRRCWGQGSAVSGEHL*HWSGFC
Trigger: ACAAAAGCCGGACCAATGCCAGAGGTGCTCCCCTGA...CACTGCTGAGCCCTGTCCCCAGCATCTCCTTTGCGTTGAGAATAAGGTCAATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CCA 90 bp TCTATTGACCTTATTCTCAACGCAAAGGAGATGCTGGGGACAGGGCTCAGCAGTAGGTCCTGGTGGGGATaGCAGCAGAGAAGGAACTGC +
Preference number: 4 (lower is better)
Translates to: SIDLILNAKEMLGTGLSSRSWWG*QQRRNC
Trigger: GCAGTTCCTTCTCTGCTGCCATCCCCACCAGGACCT...ACTGCTGAGCCCTGTCCCCAGCATCTCCTTTGCGTTGAGAATAAGGTCAATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CCA 90 bp TACAGAGCAGCTTCATGGGACATGTATGCAAGCAGGCTCCTCAGAATGCTGAGACTTCTGTGGAGGTCCTaGTGGGGATGGCAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: YRAASWDMYASRLLRMLRLLWRS*WGWQQR
Trigger: TCTCTGCTGCCATCCCCACCAGGACCTCCACAGAAG...TCTCAGCATTCTGAGGAGCCTGCTTGCATACATGTCCCATGAAGCTGCTCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CCA 90 bp TTATGTCAAGGCTTTAAGTGGAATGCTTGCTGGAAGCCTTCTAGCAGGGATGGAGGAACTTGGCTGCCCTaGTCCTGGCCACTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: LCQGFKWNACWKPSSRDGGTWLP*SWPLEQ
Trigger: CTGCTCCAGTGGCCAGGACCAGGGCAGCCAAGTTCC...TCCATCCCTGCTAGAAGGCTTCCAGCAAGCATTCCACTTAAAGCCTTGACATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR TCA 90 bp AGAGCAGCTTCATGGGACATGTATGCAAGCAGGCTCCTCAGAATGCTGAGAAGATGCTGCTGCAGCAAATaGTGCCTTGGGGCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: RAASWDMYASRLLRMLRRCCCSK*CLGASV
Trigger: CACAGAAGCCCCAAGGCATCATTTGCTGCAGCAGCA...TCTTCTCAGCATTCTGAGGAGCCTGCTTGCATACATGTCCCATGAAGCTGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR TCA 90 bp CAATGCCAAATGCATGCTGGGAAAAAGACACTGGTTCAGCAGGGTGTCCGCCAGCATGGTTTTGCTGTGTaGACGGGAACGTGCGATGTT +
Preference number: 4 (lower is better)
Translates to: QCQMHAGKKTLVQQGVRQHGFAV*TGTCDV
Trigger: AACATCGCACGTTCCCGTTCACACAGCAAAACCATG...CTGGCGGACACCCTGCTGAACCAGTGTCTTTTTCCCAGCATGCATTTGGCATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR GCA 90 bp AACGCAAAGGAGATGCTGGGGACAGGGCTCAGCAGTGACAGACATGGCCGGCACGTTCTTTTGACATCTTaGTCAATCATGGACCGTAGT +
Preference number: 4 (lower is better)
Translates to: NAKEMLGTGLSSDRHGRHVLLTS*SIMDRS
Trigger: ACTACGGTCCATGATTGAGCAAGATGTCAAAAGAAC...GTGCCGGCCATGTCTGTCACTGCTGAGCCCTGTCCCCAGCATCTCCTTTGCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR GCA 90 bp AGGCAGGCCCATCCTTGGAGTGTCTGGATGCAGAGTTTACAGCTGAGCTCCAAGCTTCAGACTCTTTCCTaGCCATGGTTTTGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: RQAHPWSVWMQSLQLSSKLQTLS*PWFCCV
Trigger: CACACAGCAAAACCATGGGCAGGAAAGAGTCTGAAG...CTTGGAGCTCAGCTGTAAACTCTGCATCCAGACACTCCAAGGATGGGCCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR GCA 90 bp GGGGAAGTTGTGAAACCAACTTTTCCTTCTGAGTGTAAACTGGCAGAGCTGCTGAGCCAGACTCCTTGCTaGTGTCATCATCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GEVVKPTFPSECKLAELLSQTPC*CHHRGW
Trigger: CCAGCCCCGATGATGACAGCAGCAAGGAGTCTGGCT...CAGCAGCTCTGCCAGTTTACACTCAGAAGGAAAAGTTGGTTTCACAACTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CCA 90 bp GAACAGCGGTGGCTGAAGCTTAGGAAGCCCAGGGTCCAGAACTGTATTTGTGTCGTCGAGCAAAGGGAATaGGGGCCATCAGAGTTTCTT +
Preference number: 4 (lower is better)
Translates to: EQRWLKLRKPRVQNCICVVEQRE*GPSEFL
Trigger: AAGAAACTCTGATGGCCCCCATTCCCTTTGCTCGAC...GACACAAATACAGTTCTGGACCCTGGGCTTCCTAAGCTTCAGCCACCGCTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CCA 90 bp CCACTGCACTCCCGGCTGTGGGGACTCTGGAAGGAGAAATCCAGTTGTTCAAGGTATGTCCCCGATGATTaGATAATGCATCAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: PLHSRLWGLWKEKSSCSRYVPDD*IMHQKA
Trigger: GGCCTTCTGATGCATTATCCAATCATCGGGGACATA...CCTTGAACAACTGGATTTCTCCTTCCAGAGTCCCCACAGCCGGGAGTGCAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CCA 90 bp GTTGAACCAATGCCAAATGCATGCTGGGAAAAAGACACTGGTTCAGCAGGGTGTAGGTCCTGGTGGGGATaGCAGCAGAGAAGGAACTGC +
Preference number: 4 (lower is better)
Translates to: VEPMPNACWEKDTGSAGCRSWWG*QQRRNC
Trigger: GCAGTTCCTTCTCTGCTGCCATCCCCACCAGGACCT...ACACCCTGCTGAACCAGTGTCTTTTTCCCAGCATGCATTTGGCATTGGTTCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CCA 90 bp GTTGAACCAATGCCAAATGCATGCTGGGAAAAAGACACTGGTTCAGCAGGGTGTCCTGGTCCTGGCCACTaGAGCAGTAGTGGTCATCAG +
Preference number: 4 (lower is better)
Translates to: VEPMPNACWEKDTGSAGCPGPGH*SSSGHQ
Trigger: CTGATGACCACTACTGCTCCAGTGGCCAGGACCAGG...ACACCCTGCTGAACCAGTGTCTTTTTCCCAGCATGCATTTGGCATTGGTTCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR TCA 90 bp GCCACTGCACTCCCGGCTGTGGGGACTCTGGAAGGAGAAATCCAGTTGTTCAAGAGTTTCCATAAGCTGTaGGAACATTGCATAGGCATC +
Preference number: 4 (lower is better)
Translates to: ATALPAVGTLEGEIQLFKSFHKL*EHCIGI
Trigger: GATGCCTATGCAATGTTCTCACAGCTTATGGAAACT...CTTGAACAACTGGATTTCTCCTTCCAGAGTCCCCACAGCCGGGAGTGCAGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR TCA 90 bp GAACAGCGGTGGCTGAAGCTTAGGAAGCCCAGGGTCCAGAACTGTATTTGTGTCAGAGTAGCATGGCTGTaGAGACATAGTCGACTAAGC +
Preference number: 4 (lower is better)
Translates to: EQRWLKLRKPRVQNCICVRVAWL*RHSRLS
Trigger: GCTTAGTCGACTATGTCTTCACAGCCATGCTACTCT...GACACAAATACAGTTCTGGACCCTGGGCTTCCTAAGCTTCAGCCACCGCTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR TCA 90 bp GGTTATGTCAAGGCTTTAAGTGGAATGCTTGCTGGAAGCCTTCTAGCAGGGATGTGCTGCTGCAGCAAATaGTGCCTTGGGGCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: GYVKALSGMLAGSLLAGMCCCSK*CLGASV
Trigger: CACAGAAGCCCCAAGGCATCATTTGCTGCAGCAGCA...CATCCCTGCTAGAAGGCTTCCAGCAAGCATTCCACTTAAAGCCTTGACATAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR TCA 90 bp AGGCAGGCCCATCCTTGGAGTGTCTGGATGCAGAGTTTACAGCTGAGCTCCAAGTGTAGGAAGGAGATCTaGGCCTCTAGTTCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: RQAHPWSVWMQSLQLSSKCRKEI*ASSSSS
Trigger: TGAAGAAGAACTAGAGGCTCAGATCTCCTTCCTACA...CTTGGAGCTCAGCTGTAAACTCTGCATCCAGACACTCCAAGGATGGGCCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR GCA 90 bp CCACTGCACTCCCGGCTGTGGGGACTCTGGAAGGAGAAATCCAGTTGTTCAAGGTCTTGTTCTTCTGACTaGAGAGGATGTCTCGTTTCA +
Preference number: 4 (lower is better)
Translates to: PLHSRLWGLWKEKSSCSRSCSSD*RGCLVS
Trigger: TGAAACGAGACATCCTCTGCAGTCAGAAGAACAAGA...CCTTGAACAACTGGATTTCTCCTTCCAGAGTCCCCACAGCCGGGAGTGCAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR GCA 90 bp TACAGAGCAGCTTCATGGGACATGTATGCAAGCAGGCTCCTCAGAATGCTGAGAAGAGCTTCCAGCAAATaGTGCGGAACCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: YRAASWDMYASRLLRMLRRASSK*CGTCCF
Trigger: GAAGCAGCAGGTTCCGCAGCATTTGCTGGAAGCTCT...TCTCAGCATTCTGAGGAGCCTGCTTGCATACATGTCCCATGAAGCTGCTCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR GCA 90 bp AGAGCAGCTTCATGGGACATGTATGCAAGCAGGCTCCTCAGAATGCTGAGAAGATCCTGCCCATGGTTTTaGTGTGTGAACGGGAACGTG +
Preference number: 4 (lower is better)
Translates to: RAASWDMYASRLLRMLRRSCPWF*CVNGNV
Trigger: CACGTTCCCGTTCACACAGCAAAACCATGGGCAGGA...TCTTCTCAGCATTCTGAGGAGCCTGCTTGCATACATGTCCCATGAAGCTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CCA 90 bp AGAGCAGCTTCATGGGACATGTATGCAAGCAGGCTCCTCAGAATGCTGAGAAGACAGCAAATGATGCCTTaGGGCTTCTGTGGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: RAASWDMYASRLLRMLRRQQMMP*GFCGGP
Trigger: AGGACCTCCACAGAAGCCCCAAGGCATCATTTGCTG...TCTTCTCAGCATTCTGAGGAGCCTGCTTGCATACATGTCCCATGAAGCTGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CCA 90 bp CTATTGACCTTATTCTCAACGCAAAGGAGATGCTGGGGACAGGGCTCAGCAGTGAGTAGCGGATGGAGGTaGAGAGCCAGTGAATTCTCT +
Preference number: 4 (lower is better)
Translates to: LLTLFSTQRRCWGQGSAVSSGWR*RASEFS
Trigger: AGAGAATTCACTGGCTCTCCACCTCCATCCGCTACT...CACTGCTGAGCCCTGTCCCCAGCATCTCCTTTGCGTTGAGAATAAGGTCAATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CCA 90 bp GAACAGCGGTGGCTGAAGCTTAGGAAGCCCAGGGTCCAGAACTGTATTTGTGTCCACAGTACTTGCACATaGCATCCAGGTCATTCAGCT +
Preference number: 4 (lower is better)
Translates to: EQRWLKLRKPRVQNCICVHSTCT*HPGHSA
Trigger: AGCTGAATGACCTGGATGCCATGTGCAAGTACTGTG...GACACAAATACAGTTCTGGACCCTGGGCTTCCTAAGCTTCAGCCACCGCTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CCA 90 bp GTTATACTAGAGTTTTGGCATTTGTCCAGCCTTTCTGACACTAAAGACATGGCTGCGGCCCTAGGAACTTaGCTGCCCTGGTCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: VILEFWHLSSLSDTKDMAAALGT*LPWSWP
Trigger: TGGCCAGGACCAGGGCAGCCAAGTTCCTAGGGCCGC...AGCCATGTCTTTAGTGTCAGAAAGGCTGGACAAATGCCAAAACTCTAGTATAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
CDS-3UTR TCA 90 bp CCACTGCACTCCCGGCTGTGGGGACTCTGGAAGGAGAAATCCAGTTGTTCAAGGGATCCTCTTCCATTTTaGCTTAGATCTCCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: PLHSRLWGLWKEKSSCSRDPLPF*LRSPLV
Trigger: AACAAGAGGAGATCTAAGTCAAAATGGAAGAGGATC...CCTTGAACAACTGGATTTCTCCTTCCAGAGTCCCCACAGCCGGGAGTGCAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR TCA 90 bp GTGGTACCTGGAACGCTCTACAGGAAACCTGCTCCCACAGAAGGAACTCCAGGTTACTTGGAGATGAACTaGTGGTTTTCGAACTTTGCC +
Preference number: 4 (lower is better)
Translates to: VVPGTLYRKPAPTEGTPGYLEMN*WFSNFA
Trigger: GGCAAAGTTCGAAAACCATCAGTTCATCTCCAAGTA...ACCTGGAGTTCCTTCTGTGGGAGCAGGTTTCCTGTAGAGCGTTCCAGGTACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR TCA 90 bp CTATTGACCTTATTCTCAACGCAAAGGAGATGCTGGGGACAGGGCTCAGCAGTGACAGGAACAGAAACCTaGGCATCGCTTCCTGTAACT +
Preference number: 4 (lower is better)
Translates to: LLTLFSTQRRCWGQGSAVTGTET*ASLPVT
Trigger: AGTTACAGGAAGCGATGCTCAGGTTTCTGTTCCTGT...CACTGCTGAGCCCTGTCCCCAGCATCTCCTTTGCGTTGAGAATAAGGTCAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224528.2
CDS-3UTR GCA 90 bp AGGCAGGCCCATCCTTGGAGTGTCTGGATGCAGAGTTTACAGCTGAGCTCCAAGTCTTGTTCTTCTGACTaGAGAGGATGTCTCGTTTCA +
Preference number: 4 (lower is better)
Translates to: RQAHPWSVWMQSLQLSSKSCSSD*RGCLVS
Trigger: TGAAACGAGACATCCTCTGCAGTCAGAAGAACAAGA...CTTGGAGCTCAGCTGTAAACTCTGCATCCAGACACTCCAAGGATGGGCCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CCA 90 bp GTTGAACCAATGCCAAATGCATGCTGGGAAAAAGACACTGGTTCAGCAGGGTGTCAGCAAATGATGCCTTaGGGCTTCTGTGGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: VEPMPNACWEKDTGSAGCQQMMP*GFCGGP
Trigger: AGGACCTCCACAGAAGCCCCAAGGCATCATTTGCTG...ACACCCTGCTGAACCAGTGTCTTTTTCCCAGCATGCATTTGGCATTGGTTCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CCA 90 bp TCCAGCCTTTCTGACACTAAAGACATGGCTGGCAAGGTTGTCCAGCACAGCCAACTTTTTAGTAGCGGATaGAGGTGGAGAGCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: SSLSDTKDMAGKVVQHSQLFSSG*RWRASE
Trigger: TTCACTGGCTCTCCACCTCCATCCGCTACTAAAAAG...TTGGCTGTGCTGGACAACCTTGCCAGCCATGTCTTTAGTGTCAGAAAGGCTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
CDS-3UTR CCA 90 bp TACAGAGCAGCTTCATGGGACATGTATGCAAGCAGGCTCCTCAGAATGCTGAGATTCGAACTTTGCCCTTaGAGGTCAGTTAGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: YRAASWDMYASRLLRMLRFELCP*RSVRAW
Trigger: CCAGGCTCTAACTGACCTCCAAGGGCAAAGTTCGAA...TCTCAGCATTCTGAGGAGCCTGCTTGCATACATGTCCCATGAAGCTGCTCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224528.2
CDS-3UTR TCA 90 bp ACAGAAGGAACTCCAGGTCTAATTCCCAGGAGGTCTGACTCCGGGTTGTGCGAAAGTTTCCATAAGCTGTaGGAACATTGCATAGGCATC +
Preference number: 4 (lower is better)
Translates to: TEGTPGLIPRRSDSGLCESFHKL*EHCIGI
Trigger: GATGCCTATGCAATGTTCTCACAGCTTATGGAAACT...TTCGCACAACCCGGAGTCAGACCTCCTGGGAATTAGACCTGGAGTTCCTTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR TCA 90 bp GAACAGCGGTGGCTGAAGCTTAGGAAGCCCAGGGTCCAGAACTGTATTTGTGTCTACTTGGAGATGAACTaGTGGTTTTCGAACTTTGCC +
Preference number: 4 (lower is better)
Translates to: EQRWLKLRKPRVQNCICVYLEMN*WFSNFA
Trigger: GGCAAAGTTCGAAAACCATCAGTTCATCTCCAAGTA...GACACAAATACAGTTCTGGACCCTGGGCTTCCTAAGCTTCAGCCACCGCTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR TCA 90 bp CCACTGCACTCCCGGCTGTGGGGACTCTGGAAGGAGAAATCCAGTTGTTCAAGGCTTTCAGAATGTCTTTaGTCTGTTTTAATCCTGCCA +
Preference number: 4 (lower is better)
Translates to: PLHSRLWGLWKEKSSCSRLSECL*SVLILP
Trigger: TGGCAGGATTAAAACAGATCAAAGACATTCTGAAAG...CCTTGAACAACTGGATTTCTCCTTCCAGAGTCCCCACAGCCGGGAGTGCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR GCA 90 bp GTTGAACCAATGCCAAATGCATGCTGGGAAAAAGACACTGGTTCAGCAGGGTGTCTGCTGCTTCTCAGCTaGCCATTAATCCCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: VEPMPNACWEKDTGSAGCLLLLS*PLIPFC
Trigger: ACAGAAGGGGATTAATGGGCAGCTGAGAAGCAGCAG...ACACCCTGCTGAACCAGTGTCTTTTTCCCAGCATGCATTTGGCATTGGTTCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR GCA 90 bp TACAGAGCAGCTTCATGGGACATGTATGCAAGCAGGCTCCTCAGAATGCTGAGACCTTTGCACAGTACTTaGACATGGCATCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: YRAASWDMYASRLLRMLRPLHST*TWHPGH
Trigger: ATGACCTGGATGCCATGTGCAAGTACTGTGCAAAGG...TCTCAGCATTCTGAGGAGCCTGCTTGCATACATGTCCCATGAAGCTGCTCTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CCA 90 bp GTCAAGGCTTTAAGTGGAATGCTTGCTGGAAGCCTTCTAGCAGGGATGGATGGTCTTTTTAGTAGCGGATaGAGGTGGAGAGCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: VKALSGMLAGSLLAGMDGLFSSG*RWRASE
Trigger: TTCACTGGCTCTCCACCTCCATCCGCTACTAAAAAG...ACCATCCATCCCTGCTAGAAGGCTTCCAGCAAGCATTCCACTTAAAGCCTTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CCA 90 bp TACAGAGCAGCTTCATGGGACATGTATGCAAGCAGGCTCCTCAGAATGCTGAGACACAGTACTTGCACATaGCATCCAGGTCATTCAGCT +
Preference number: 4 (lower is better)
Translates to: YRAASWDMYASRLLRMLRHSTCT*HPGHSA
Trigger: AGCTGAATGACCTGGATGCCATGTGCAAGTACTGTG...TCTCAGCATTCTGAGGAGCCTGCTTGCATACATGTCCCATGAAGCTGCTCTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR CAA 72 bp CAGAGTTACACTCAGCAGCAGTGTGGTCACTTCAAGTaGCAGTTAGTGCAGAGCAGAAGGTCATCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: QSYTQQQCGHFK*QLVQSRRSSCQ
Trigger: TTGGCAAGATGACCTTCTGCTCTGCACTAACTGCAACTTGAAGTGACCACACTGCTGCTGAGTGTAACTCTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
CDS-3UTR TCA 90 bp AGGCAGGCCCATCCTTGGAGTGTCTGGATGCAGAGTTTACAGCTGAGCTCCAAGCCATTCTTTCATATATaGATTGAACGTCCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: RQAHPWSVWMQSLQLSSKPFFHI*IERPFS
Trigger: ACTGAAGGGACGTTCAATTCATATATGAAAGAATGG...CTTGGAGCTCAGCTGTAAACTCTGCATCCAGACACTCCAAGGATGGGCCTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR TCA 90 bp CTATTGACCTTATTCTCAACGCAAAGGAGATGCTGGGGACAGGGCTCAGCAGTGCAGGAAACGTTCTTTTaGCATCTTGCTCAATCATGG +
Preference number: 4 (lower is better)
Translates to: LLTLFSTQRRCWGQGSAVQETFF*HLAQSW
Trigger: CCATGATTGAGCAAGATGTCAAAAGAACGTTTCCTG...CACTGCTGAGCCCTGTCCCCAGCATCTCCTTTGCGTTGAGAATAAGGTCAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR TCA 90 bp TTATGTCAAGGCTTTAAGTGGAATGCTTGCTGGAAGCCTTCTAGCAGGGATGGACATGGTTTTGCTGTGTaGACGGGAACGTGCGATGTT +
Preference number: 4 (lower is better)
Translates to: LCQGFKWNACWKPSSRDGHGFAV*TGTCDV
Trigger: AACATCGCACGTTCCCGTTCACACAGCAAAACCATG...TCCATCCCTGCTAGAAGGCTTCCAGCAAGCATTCCACTTAAAGCCTTGACATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR TCA 90 bp TCTATTGACCTTATTCTCAACGCAAAGGAGATGCTGGGGACAGGGCTCAGCAGTTGTAGGAAGGAGATCTaGGCCTCTAGTTCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: SIDLILNAKEMLGTGLSSCRKEI*ASSSSS
Trigger: TGAAGAAGAACTAGAGGCTCAGATCTCCTTCCTACA...ACTGCTGAGCCCTGTCCCCAGCATCTCCTTTGCGTTGAGAATAAGGTCAATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR TCA 90 bp GGTTATGTCAAGGCTTTAAGTGGAATGCTTGCTGGAAGCCTTCTAGCAGGGATGCTTTGGAAACCAGAATaGAGTCATCTGGGGTCGTTC +
Preference number: 4 (lower is better)
Translates to: GYVKALSGMLAGSLLAGMLWKPE*SHLGSF
Trigger: GAACGACCCCAGATGACTTCATTCTGGTTTCCAAAG...CATCCCTGCTAGAAGGCTTCCAGCAAGCATTCCACTTAAAGCCTTGACATAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR GCA 90 bp GTTATACTAGAGTTTTGGCATTTGTCCAGCCTTTCTGACACTAAAGACATGGCTTGCTGGTGTTGCTGCTaGTGCTGCTGTGGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: VILEFWHLSSLSDTKDMACWCCC*CCCGCC
Trigger: GCAGCAACCACAGCAGCAGCAGCAGCAACACCAGCA...AGCCATGTCTTTAGTGTCAGAAAGGCTGGACAAATGCCAAAACTCTAGTATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
CDS-3UTR CCA 90 bp TTATGTCAAGGCTTTAAGTGGAATGCTTGCTGGAAGCCTTCTAGCAGGGATGGATTTTCATTTCCTCACTaGGCTGTGCAGACTCGCTGG +
Preference number: 4 (lower is better)
Translates to: LCQGFKWNACWKPSSRDGFSFPH*AVQTRW
Trigger: CCAGCGAGTCTGCACAGCCCAGTGAGGAAATGAAAA...TCCATCCCTGCTAGAAGGCTTCCAGCAAGCATTCCACTTAAAGCCTTGACATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CCA 90 bp AGAGCAGCTTCATGGGACATGTATGCAAGCAGGCTCCTCAGAATGCTGAGAAGACCTTGGATTTCTCTTTaGGTCTCTAAGGAACAGAGC +
Preference number: 4 (lower is better)
Translates to: RAASWDMYASRLLRMLRRPWISL*VSKEQS
Trigger: GCTCTGTTCCTTAGAGACCCAAAGAGAAATCCAAGG...TCTTCTCAGCATTCTGAGGAGCCTGCTTGCATACATGTCCCATGAAGCTGCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR TCA 90 bp CCTGTATCTTGTGGTACCTGGAACGCTCTACAGGAAACCTGCTCCCACAGAAGGAGGCTCTTAGTTCTTTaGTTTTACTTATCCACTGAC +
Preference number: 4 (lower is better)
Translates to: PVSCGTWNALQETCSHRRRLLVL*FYLSTD
Trigger: GTCAGTGGATAAGTAAAATCAAAGAACTAAGAGCCT...CCTTCTGTGGGAGCAGGTTTCCTGTAGAGCGTTCCAGGTACCACAAGATACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR TCA 90 bp AGAGCAGCTTCATGGGACATGTATGCAAGCAGGCTCCTCAGAATGCTGAGAAGAAGTGTATGTCCCCGATaGTTGGATAATGCATCAGAA +
Preference number: 4 (lower is better)
Translates to: RAASWDMYASRLLRMLRRSVCPR*LDNASE
Trigger: TTCTGATGCATTATCCAATCATCGGGGACATACACT...TCTTCTCAGCATTCTGAGGAGCCTGCTTGCATACATGTCCCATGAAGCTGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR TCA 90 bp TTATGTCAAGGCTTTAAGTGGAATGCTTGCTGGAAGCCTTCTAGCAGGGATGGACAAGATGCATGTCCATaGCCTTTGCACAGTACTTGC +
Preference number: 4 (lower is better)
Translates to: LCQGFKWNACWKPSSRDGQDACP*PLHSTC
Trigger: GCAAGTACTGTGCAAAGGTCATGGACATGCATCTTG...TCCATCCCTGCTAGAAGGCTTCCAGCAAGCATTCCACTTAAAGCCTTGACATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR GCA 90 bp TTATTAGTACACATCAAGTGGGCTCGCTCTGCCAAGGAGGCATTTCCTACATCACCTTTGCACAGTACTTaGACATGGCATCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: LLVHIKWARSAKEAFPTSPLHST*TWHPGH
Trigger: ATGACCTGGATGCCATGTGCAAGTACTGTGCAAAGG...TGATGTAGGAAATGCCTCCTTGGCAGAGCGAGCCCACTTGATGTGTACTAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
CDS-3UTR GCA 90 bp AGAGCAGCTTCATGGGACATGTATGCAAGCAGGCTCCTCAGAATGCTGAGAAGAATGGTTTTCGAACTTTaGCCTTGGAGGTCAGTTAGA +
Preference number: 4 (lower is better)
Translates to: RAASWDMYASRLLRMLRRMVFEL*PWRSVR
Trigger: TCTAACTGACCTCCAAGGGCAAAGTTCGAAAACCAT...TCTTCTCAGCATTCTGAGGAGCCTGCTTGCATACATGTCCCATGAAGCTGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224528.2
CDS-3UTR CCA 90 bp CCTGTATCTTGTGGTACCTGGAACGCTCTACAGGAAACCTGCTCCCACAGAAGGCATCTTGCTCAATCATaGACCGTAGTTCTTTATCTT +
Preference number: 4 (lower is better)
Translates to: PVSCGTWNALQETCSHRRHLAQS*TVVLYL
Trigger: AAGATAAAGAACTACGGTCCATGATTGAGCAAGATG...CCTTCTGTGGGAGCAGGTTTCCTGTAGAGCGTTCCAGGTACCACAAGATACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR CAA 72 bp TTCTTGGCCTGGTGGGTAGCCAGTGATAGTTATCTATaGACCTTATTCTCAACGCAAAGGAGATGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: FLAWWVASDSYL*TLFSTQRRCWG
Trigger: TCCCCAGCATCTCCTTTGCGTTGAGAATAAGGTCAATAGATAACTATCACTGGCTACCCACCAGGCCAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CCA 90 bp AGCTTAGGAAGCCCAGGGTCCAGAACTGTATTTGTGTCAAACAAGAATCTGATTGCTGTGCAGACTCGCTaGCATGTAGAAAAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: SLGSPGSRTVFVSNKNLIAVQTR*HVEKLG
Trigger: ACCAAGCTTTTCTACATGCCAGCGAGTCTGCACAGC...AATCAGATTCTTGTTTGACACAAATACAGTTCTGGACCCTGGGCTTCCTAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CCA 90 bp AGCTTAGGAAGCCCAGGGTCCAGAACTGTATTTGTGTCAAACAAGAATCTGATTGTCGAGCAAAGGGAATaGGGGCCATCAGAGTTTCTT +
Preference number: 4 (lower is better)
Translates to: SLGSPGSRTVFVSNKNLIVEQRE*GPSEFL
Trigger: AAGAAACTCTGATGGCCCCCATTCCCTTTGCTCGAC...AATCAGATTCTTGTTTGACACAAATACAGTTCTGGACCCTGGGCTTCCTAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR TCA 90 bp GGTTATGTCAAGGCTTTAAGTGGAATGCTTGCTGGAAGCCTTCTAGCAGGGATGGATCCTCTTCCATTTTaGCTTAGATCTCCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: GYVKALSGMLAGSLLAGMDPLPF*LRSPLV
Trigger: AACAAGAGGAGATCTAAGTCAAAATGGAAGAGGATC...CATCCCTGCTAGAAGGCTTCCAGCAAGCATTCCACTTAAAGCCTTGACATAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR TCA 90 bp GGTTATGTCAAGGCTTTAAGTGGAATGCTTGCTGGAAGCCTTCTAGCAGGGATGGTTTCTTTTCCCTTTTaGCCATCATGCTCAAACGTA +
Preference number: 4 (lower is better)
Translates to: GYVKALSGMLAGSLLAGMVSFPF*PSCSNV
Trigger: TACGTTTGAGCATGATGGTCAAAAGGGAAAAGAAAC...CATCCCTGCTAGAAGGCTTCCAGCAAGCATTCCACTTAAAGCCTTGACATAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR TCA 90 bp AGCTTAGGAAGCCCAGGGTCCAGAACTGTATTTGTGTCAAACAAGAATCTGATTCTTTGGAAACCAGAATaGAGTCATCTGGGGTCGTTC +
Preference number: 4 (lower is better)
Translates to: SLGSPGSRTVFVSNKNLILWKPE*SHLGSF
Trigger: GAACGACCCCAGATGACTTCATTCTGGTTTCCAAAG...AATCAGATTCTTGTTTGACACAAATACAGTTCTGGACCCTGGGCTTCCTAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR GCA 90 bp AGCTTAGGAAGCCCAGGGTCCAGAACTGTATTTGTGTCAAACAAGAATCTGATTCATGTCCATGACCTTTaGACAGTACTTGCACATGGC +
Preference number: 4 (lower is better)
Translates to: SLGSPGSRTVFVSNKNLIHVHDL*TVLAHG
Trigger: GCCATGTGCAAGTACTGTGCAAAGGTCATGGACATG...AATCAGATTCTTGTTTGACACAAATACAGTTCTGGACCCTGGGCTTCCTAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CCA 90 bp TCTATTGACCTTATTCTCAACGCAAAGGAGATGCTGGGGACAGGGCTCAGCAGTCATCTTGCTCAATCATaGACCGTAGTTCTTTATCTT +
Preference number: 4 (lower is better)
Translates to: SIDLILNAKEMLGTGLSSHLAQS*TVVLYL
Trigger: AAGATAAAGAACTACGGTCCATGATTGAGCAAGATG...ACTGCTGAGCCCTGTCCCCAGCATCTCCTTTGCGTTGAGAATAAGGTCAATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
3UTR CAA 72 bp TGTACTGAACAGCAGGTTATACTAGAGTTTTGGCATTaGTCCAGCCTTTCTGACACTAAAGACATGGCTGGC +
Preference number: 4 (lower is better)
Translates to: CTEQQVILEFWH*SSLSDTKDMAG
Trigger: GCCAGCCATGTCTTTAGTGTCAGAAAGGCTGGACAAATGCCAAAACTCTAGTATAACCTGCTGTTCAGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
CDS-3UTR TCA 90 bp GTTGAACCAATGCCAAATGCATGCTGGGAAAAAGACACTGGTTCAGCAGGGTGTAGGCTCTTAGTTCTTTaGTTTTACTTATCCACTGAC +
Preference number: 4 (lower is better)
Translates to: VEPMPNACWEKDTGSAGCRLLVL*FYLSTD
Trigger: GTCAGTGGATAAGTAAAATCAAAGAACTAAGAGCCT...ACACCCTGCTGAACCAGTGTCTTTTTCCCAGCATGCATTTGGCATTGGTTCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR GCA 90 bp GTTATACTAGAGTTTTGGCATTTGTCCAGCCTTTCTGACACTAAAGACATGGCTCTTCAGACTCTTTCCTaGCCATGGTTTTGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: VILEFWHLSSLSDTKDMALQTLS*PWFCCV
Trigger: CACACAGCAAAACCATGGGCAGGAAAGAGTCTGAAG...AGCCATGTCTTTAGTGTCAGAAAGGCTGGACAAATGCCAAAACTCTAGTATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
CDS-3UTR CCA 90 bp TTTACTTCACACTTCCAATCTGATCAGAGAGGACTGCATGAAACACAGAAATGTAGTAGCGGATGGAGGTaGAGAGCCAGTGAATTCTCT +
Preference number: 4 (lower is better)
Translates to: FTSHFQSDQRGLHETQKCSSGWR*RASEFS
Trigger: AGAGAATTCACTGGCTCTCCACCTCCATCCGCTACT...ACATTTCTGTGTTTCATGCAGTCCTCTCTGATCAGATTGGAAGTGTGAAGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
3UTR CAA 72 bp TCACTCAGTATCAACAAGTTCCCTGTGGCTGAAGCTTaGATAAGGGGAAGTTGTGAAACCAACTTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SLSINKFPVAEA*IRGSCETNFSF
Trigger: GAAGGAAAAGTTGGTTTCACAACTTCCCCTTATCAAAGCTTCAGCCACAGGGAACTTGTTGATACTGAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR TCA 90 bp TTATGTCAAGGCTTTAAGTGGAATGCTTGCTGGAAGCCTTCTAGCAGGGATGGACTTTCAGAATGTCTTTaGTCTGTTTTAATCCTGCCA +
Preference number: 4 (lower is better)
Translates to: LCQGFKWNACWKPSSRDGLSECL*SVLILP
Trigger: TGGCAGGATTAAAACAGATCAAAGACATTCTGAAAG...TCCATCCCTGCTAGAAGGCTTCCAGCAAGCATTCCACTTAAAGCCTTGACATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR TCA 90 bp AGCTTAGGAAGCCCAGGGTCCAGAACTGTATTTGTGTCAAACAAGAATCTGATTTCCTCTTGTTTTATTTaGATAACTGAACAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: SLGSPGSRTVFVSNKNLISSCFI*ITEQGV
Trigger: GACCCCTTGTTCAGTTATTCAAATAAAACAAGAGGA...AATCAGATTCTTGTTTGACACAAATACAGTTCTGGACCCTGGGCTTCCTAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS GCA 90 bp TCTGGGGTCGTTCCACCGGTGCACCCTGGCATCTCTGAAGAGGCCTaGTTGGCGGCCCTAGGAACTTGGCTGCCCTGGTCCTGGCCACTG +
Preference number: 5 (lower is better)
Translates to: SGVVPPVHPGISEEA*LAALGTWLPWSWPL
Trigger: CAGTGGCCAGGACCAGGGCAGCCAAGTTCCTAGGGCCGCCAAGCAGGCCTCTTCAGAGATGCCAGGGTGCACCGGTGGAACGACCCCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS GCA 90 bp GGGCTTCTGTGGAGGTCCTGGTGGGGATGGCAGCAGAGAAGGAACTaGTGCTGTTGTTTCCGGGTACAGGGCCACCCATACTGCCCGGAG +
Preference number: 5 (lower is better)
Translates to: GLLWRSWWGWQQRRN*CCCFRVQGHPYCPE
Trigger: CTCCGGGCAGTATGGGTGGCCCTGTACCCGGAAACAACAGCAGCAGTTCCTTCTCTGCTGCCATCCCCACCAGGACCTCCACAGAAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS TCA 90 bp AATGAAGTCATCTGGGGTCGTTCCACCGGTGCACCCTGGCATCTCTaGAGAGGCCTGCTTGGCGGCCCTAGGAACTTGGCTGCCCTGGTC +
Preference number: 5 (lower is better)
Translates to: NEVIWGRSTGAPWHL*RGLLGGPRNLAALV
Trigger: GACCAGGGCAGCCAAGTTCCTAGGGCCGCCAAGCAGGCCTCTTCAGAGATGCCAGGGTGCACCGGTGGAACGACCCCAGATGACTTCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS GCA 90 bp TTGAGGCTATCCGCAAACAGGGCATCCCAGACCACCAGCAGGTCCTaGAGAGGGAACTCTCTGCCAAACAGCAGCCGCACCCATCGTAAC +
Preference number: 5 (lower is better)
Translates to: LRLSANRASQTTSRS*RGNSLPNSSRTHRN
Trigger: GTTACGATGGGTGCGGCTGCTGTTTGGCAGAGAGTTCCCTCTGCAGGACCTGCTGGTGGTCTGGGATGCCCTGTTTGCGGATAGCCTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS CCA 90 bp GCAGCAAATGATGCCTTGGGGCTTCTGTGGAGGTCCTGGTGGGGATaGCAGCAGAGAAGGAACTGCTGCTGTTGTTTCCGGGTACAGGGC +
Preference number: 5 (lower is better)
Translates to: AANDALGLLWRSWWG*QQRRNCCCCFRVQG
Trigger: GCCCTGTACCCGGAAACAACAGCAGCAGTTCCTTCTCTGCTGCCATCCCCACCAGGACCTCCACAGAAGCCCCAAGGCATCATTTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS CCA 90 bp GCTGCTGCAGCAAATGATGCCTTGGGGCTTCTGTGGAGGTCCTGGTaGGGATGGCAGCAGAGAAGGAACTGCTGCTGTTGTTTCCGGGTA +
Preference number: 5 (lower is better)
Translates to: AAAANDALGLLWRSW*GWQQRRNCCCCFRV
Trigger: TACCCGGAAACAACAGCAGCAGTTCCTTCTCTGCTGCCATCCCCACCAGGACCTCCACAGAAGCCCCAAGGCATCATTTGCTGCAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS CCA 90 bp GTTGCTGCTGCAGCAAATGATGCCTTGGGGCTTCTGTGGAGGTCCTaGTGGGGATGGCAGCAGAGAAGGAACTGCTGCTGTTGTTTCCGG +
Preference number: 5 (lower is better)
Translates to: VAAAANDALGLLWRS*WGWQQRRNCCCCFR
Trigger: CCGGAAACAACAGCAGCAGTTCCTTCTCTGCTGCCATCCCCACCAGGACCTCCACAGAAGCCCCAAGGCATCATTTGCTGCAGCAGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CAA 90 bp GAAGGGAGATGGCACTGGCCGGTGCAGGGCCACAGGTGCTCCCCGCTTTGTCTTAAGCTGTTGGAGACCTaGTGTATATTCAGGGGAGCA +
Preference number: 5 (lower is better)
Translates to: EGRWHWPVQGHRCSPLCLKLLET*CIFRGA
Trigger: TGCTCCCCTGAATATACACAAGGTCTCCAACAGCTT...AAGACAAAGCGGGGAGCACCTGTGGCCCTGCACCGGCCAGTGCCATCTCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
CDS GCA 90 bp ACCGGCATGCTTTCAGATTTCATCAGTCTCTGCTGCTGCTGTTGCTaGTGGTGTTGCTGCTGCTGCTGCTGTGGTTGCTGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: TGMLSDFISLCCCCC*WCCCCCCCGCCCCC
Trigger: GCAGCAGCAGCAGCAACCACAGCAGCAGCAGCAGCAACACCAGCAGCAACAGCAGCAGCAGAGACTGATGAAATCTGAAAGCATGCCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS CCA 90 bp GGCATGCTTTCAGATTTCATCAGTCTCTGCTGCTGCTGTTGCTGCTaGTGTTGCTGCTGCTGCTGCTGTGGTTGCTGCTGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: GMLSDFISLCCCCCC*CCCCCCCGCCCCCC
Trigger: GCAGCAGCAGCAGCAGCAACCACAGCAGCAGCAGCAGCAACACCAGCAGCAACAGCAGCAGCAGAGACTGATGAAATCTGAAAGCATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CAA 90 bp GGAGCCACCCGCTCTGCTCCCTCTGTGTGGCATGTTGGGCTTCCAAGGCAGGAGTGGTCCTGGATCTGGTaGACTTTTGTAACAATGGCA +
Preference number: 5 (lower is better)
Translates to: GATRSAPSVWHVGLPRQEWSWIW*TFVTMA
Trigger: TGCCATTGTTACAAAAGTCAACCAGATCCAGGACCA...CTCCTGCCTTGGAAGCCCAACATGCCACACAGAGGGAGCAGAGCGGGTGGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS GCA 90 bp TGTACCGGCATGCTTTCAGATTTCATCAGTCTCTGCTGCTGCTGTTaGTGCTGGTGTTGCTGCTGCTGCTGCTGTGGTTGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: CTGMLSDFISLCCCC*CWCCCCCCCGCCCC
Trigger: GCAGCAGCAGCAACCACAGCAGCAGCAGCAGCAACACCAGCAGCAACAGCAGCAGCAGAGACTGATGAAATCTGAAAGCATGCCGGTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CAA 90 bp GTGGTACCTGGAACGCTCTACAGGAAACCTGCTCCCACAGAAGGAACTCCAGGTAAGGAACTGCTGCTGTaGTTTCCGGGTACAGGGCCA +
Preference number: 5 (lower is better)
Translates to: VVPGTLYRKPAPTEGTPGKELLL*FPGTGP
Trigger: TGGCCCTGTACCCGGAAACAACAGCAGCAGTTCCTT...ACCTGGAGTTCCTTCTGTGGGAGCAGGTTTCCTGTAGAGCGTTCCAGGTACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CAA 90 bp TCCAGCCCTGGGAGCCACCCGCTCTGCTCCCTCTGTGTGGCATGTTGGGCTTCCCCTTTCAGAATGTCTTaGATCTGTTTTAATCCTGCC +
Preference number: 5 (lower is better)
Translates to: SSPGSHPLCSLCVACWASPFRMS*ICFNPA
Trigger: GGCAGGATTAAAACAGATCAAAGACATTCTGAAAGG...GGAAGCCCAACATGCCACACAGAGGGAGCAGAGCGGGTGGCTCCCAGGGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS TCA 90 bp GCTGCTGTTGTTTCCGGGTACAGGGCCACCCATACTGCCCGGAGCTaGGGCTGGGGAAATCAGCTTTCTTCCAAAGTTAATCAAGCTGTT +
Preference number: 5 (lower is better)
Translates to: AAVVSGYRATHTARS*GWGNQLSSKVNQAV
Trigger: AACAGCTTGATTAACTTTGGAAGAAAGCTGATTTCCCCAGCCTCAGCTCCGGGCAGTATGGGTGGCCCTGTACCCGGAAACAACAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS GCA 90 bp TTCAACTGTACCGGCATGCTTTCAGATTTCATCAGTCTCTGCTGCTaGTGTTGCTGCTGGTGTTGCTGCTGCTGCTGCTGTGGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: FNCTGMLSDFISLCC*CCCWCCCCCCCGCC
Trigger: GCAGCAACCACAGCAGCAGCAGCAGCAACACCAGCAGCAACAGCAGCAGCAGAGACTGATGAAATCTGAAAGCATGCCGGTACAGTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS CCA 90 bp TCCTCACTGGGCTGTGCAGACTCGCTGGCATGTAGAAAAGCTTGGTaGTCACAGTGGAGGGTAAAGATGATAGGCGCTAGTAGCTCATGC +
Preference number: 5 (lower is better)
Translates to: SSLGCADSLACRKAW*SQWRVKMIGASSSC
Trigger: GCATGAGCTACTAGCGCCTATCATCTTTACCCTCCACTGTGACCACCAAGCTTTTCTACATGCCAGCGAGTCTGCACAGCCCAGTGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CAA 90 bp TCCAGCCTTTCTGACACTAAAGACATGGCTGGCAAGGTTGTCCAGCACAGCCAAAAGGAACTGCTGCTGTaGTTTCCGGGTACAGGGCCA +
Preference number: 5 (lower is better)
Translates to: SSLSDTKDMAGKVVQHSQKELLL*FPGTGP
Trigger: TGGCCCTGTACCCGGAAACAACAGCAGCAGTTCCTT...TTGGCTGTGCTGGACAACCTTGCCAGCCATGTCTTTAGTGTCAGAAAGGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
CDS-3UTR CAA 90 bp TACAGAGCAGCTTCATGGGACATGTATGCAAGCAGGCTCCTCAGAATGCTGAGATCCAGCTGGCTCTGGTaGAAGCGCAGGGAACCTTTC +
Preference number: 5 (lower is better)
Translates to: YRAASWDMYASRLLRMLRSSWLW*KRREPF
Trigger: GAAAGGTTCCCTGCGCTTCAACCAGAGCCAGCTGGA...TCTCAGCATTCTGAGGAGCCTGCTTGCATACATGTCCCATGAAGCTGCTCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS GCA 90 bp CCTTTGTTCAACTGTACCGGCATGCTTTCAGATTTCATCAGTCTCTaGTGCTGCTGTTGCTGCTGGTGTTGCTGCTGCTGCTGCTGTGGT +
Preference number: 5 (lower is better)
Translates to: PLFNCTGMLSDFISL*CCCCCWCCCCCCCG
Trigger: ACCACAGCAGCAGCAGCAGCAACACCAGCAGCAACAGCAGCAGCAGAGACTGATGAAATCTGAAAGCATGCCGGTACAGTTGAACAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS CCA 90 bp GGCTGTGCAGACTCGCTGGCATGTAGAAAAGCTTGGTGGTCACAGTaGAGGGTAAAGATGATAGGCGCTAGTAGCTCATGCATACCCTGT +
Preference number: 5 (lower is better)
Translates to: GCADSLACRKAWWSQ*RVKMIGASSSCIPC
Trigger: ACAGGGTATGCATGAGCTACTAGCGCCTATCATCTTTACCCTCCACTGTGACCACCAAGCTTTTCTACATGCCAGCGAGTCTGCACAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS CCA 90 bp TGGTCATCAGCGATGGTAATCTGCTCATTCTCGCCAGCCTCCAGCTaGCTCTGGTTGAAGCGCAGGGAACCTTTCAGAATGTCTTTGATC +
Preference number: 5 (lower is better)
Translates to: WSSAMVICSFSPASS*LWLKRREPFRMSLI
Trigger: GATCAAAGACATTCTGAAAGGTTCCCTGCGCTTCAACCAGAGCCAGCTGGAGGCTGGCGAGAATGAGCAGATTACCATCGCTGATGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CAA 90 bp GTGGTACCTGGAACGCTCTACAGGAAACCTGCTCCCACAGAAGGAACTCCAGGTCGGGAACGTGCGATGTaGCTGAAAAAGGAATCCTTT +
Preference number: 5 (lower is better)
Translates to: VVPGTLYRKPAPTEGTPGRERAM*LKKESF
Trigger: AAAGGATTCCTTTTTCAGCAACATCGCACGTTCCCG...ACCTGGAGTTCCTTCTGTGGGAGCAGGTTTCCTGTAGAGCGTTCCAGGTACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CAA 90 bp ACAGAAGGAACTCCAGGTCTAATTCCCAGGAGGTCTGACTCCGGGTTGTGCGAAACCTTTGCACAGTACTaGCACATGGCATCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: TEGTPGLIPRRSDSGLCETFAQY*HMASRS
Trigger: TGACCTGGATGCCATGTGCAAGTACTGTGCAAAGGT...TTCGCACAACCCGGAGTCAGACCTCCTGGGAATTAGACCTGGAGTTCCTTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CAA 90 bp GGGGAAGTTGTGAAACCAACTTTTCCTTCTGAGTGTAAACTGGCAGAGCTGCTGTCCAGCTGGCTCTGGTaGAAGCGCAGGGAACCTTTC +
Preference number: 5 (lower is better)
Translates to: GEVVKPTFPSECKLAELLSSWLW*KRREPF
Trigger: GAAAGGTTCCCTGCGCTTCAACCAGAGCCAGCTGGA...CAGCAGCTCTGCCAGTTTACACTCAGAAGGAAAAGTTGGTTTCACAACTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS TCA 90 bp CTTTGCCCTTGGAGGTCAGTTAGAGCCTGGACAGGAACAGAAACCTaGGCATCGCTTCCTGTAACTACGTCGCCTTTGTTCAACTGTACC +
Preference number: 5 (lower is better)
Translates to: LCPWRSVRAWTGTET*ASLPVTTSPLFNCT
Trigger: GGTACAGTTGAACAAAGGCGACGTAGTTACAGGAAGCGATGCTCAGGTTTCTGTTCCTGTCCAGGCTCTAACTGACCTCCAAGGGCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224528.2
CDS CCA 90 bp ATTTCCTCACTGGGCTGTGCAGACTCGCTGGCATGTAGAAAAGCTTaGTGGTCACAGTGGAGGGTAAAGATGATAGGCGCTAGTAGCTCA +
Preference number: 5 (lower is better)
Translates to: ISSLGCADSLACRKA*WSQWRVKMIGASSS
Trigger: TGAGCTACTAGCGCCTATCATCTTTACCCTCCACTGTGACCACCAAGCTTTTCTACATGCCAGCGAGTCTGCACAGCCCAGTGAGGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CAA 90 bp CAAAGGAGATGCTGGGGACAGGGCTCAGCAGTGACAGACATGGCCGGCACTGTCAAGTTAATCAAGCTGTaGGAGACCTTGTGTATATTC +
Preference number: 5 (lower is better)
Translates to: QRRCWGQGSAVTDMAGTVKLIKL*ETLCIF
Trigger: GAATATACACAAGGTCTCCAACAGCTTGATTAACTT...GACAGTGCCGGCCATGTCTGTCACTGCTGAGCCCTGTCCCCAGCATCTCCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS CCA 90 bp TCAGCGATGGTAATCTGCTCATTCTCGCCAGCCTCCAGCTGGCTCTaGTTGAAGCGCAGGGAACCTTTCAGAATGTCTTTGATCTGTTTT +
Preference number: 5 (lower is better)
Translates to: SAMVICSFSPASSWL*LKRREPFRMSLICF
Trigger: AAAACAGATCAAAGACATTCTGAAAGGTTCCCTGCGCTTCAACCAGAGCCAGCTGGAGGCTGGCGAGAATGAGCAGATTACCATCGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CAA 90 bp TACAGAGCAGCTTCATGGGACATGTATGCAAGCAGGCTCCTCAGAATGCTGAGACGGGAACGTGCGATGTaGCTGAAAAAGGAATCCTTT +
Preference number: 5 (lower is better)
Translates to: YRAASWDMYASRLLRMLRRERAM*LKKESF
Trigger: AAAGGATTCCTTTTTCAGCAACATCGCACGTTCCCG...TCTCAGCATTCTGAGGAGCCTGCTTGCATACATGTCCCATGAAGCTGCTCTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CAA 90 bp CCGAAGGAAAACTTCCACACCAGCCTGGTTATAGGAACGACACCTCTTTTCAACACCTTTGCACAGTACTaGCACATGGCATCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: PKENFHTSLVIGTTPLFNTFAQY*HMASRS
Trigger: TGACCTGGATGCCATGTGCAAGTACTGTGCAAAGGT...GTTGAAAAGAGGTGTCGTTCCTATAACCAGGCTGGTGTGGAAGTTTTCCTTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
CDS-3UTR CAA 90 bp TCTATTGACCTTATTCTCAACGCAAAGGAGATGCTGGGGACAGGGCTCAGCAGTACTGCTCGTTCTCTCTaGCATAGCAGAACAGAACAT +
Preference number: 5 (lower is better)
Translates to: SIDLILNAKEMLGTGLSSTARSL*HSRTEH
Trigger: ATGTTCTGTTCTGCTATGCAAGAGAGAACGAGCAGT...ACTGCTGAGCCCTGTCCCCAGCATCTCCTTTGCGTTGAGAATAAGGTCAATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CAA 90 bp GTCAAGGCTTTAAGTGGAATGCTTGCTGGAAGCCTTCTAGCAGGGATGGATGGTACTGCTCGTTCTCTCTaGCATAGCAGAACAGAACAT +
Preference number: 5 (lower is better)
Translates to: VKALSGMLAGSLLAGMDGTARSL*HSRTEH
Trigger: ATGTTCTGTTCTGCTATGCAAGAGAGAACGAGCAGT...ACCATCCATCCCTGCTAGAAGGCTTCCAGCAAGCATTCCACTTAAAGCCTTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CAA 90 bp GGGGAAGTTGTGAAACCAACTTTTCCTTCTGAGTGTAAACTGGCAGAGCTGCTGAAGCTGTTGGAGACCTaGTGTATATTCAGGGGAGCA +
Preference number: 5 (lower is better)
Translates to: GEVVKPTFPSECKLAELLKLLET*CIFRGA
Trigger: TGCTCCCCTGAATATACACAAGGTCTCCAACAGCTT...CAGCAGCTCTGCCAGTTTACACTCAGAAGGAAAAGTTGGTTTCACAACTTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CAA 90 bp AGGCAGGCCCATCCTTGGAGTGTCTGGATGCAGAGTTTACAGCTGAGCTCCAAGAAGTTAATCAAGCTGTaGGAGACCTTGTGTATATTC +
Preference number: 5 (lower is better)
Translates to: RQAHPWSVWMQSLQLSSKKLIKL*ETLCIF
Trigger: GAATATACACAAGGTCTCCAACAGCTTGATTAACTT...CTTGGAGCTCAGCTGTAAACTCTGCATCCAGACACTCCAAGGATGGGCCTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS TCA 90 bp TGGATTTCTCTTTGGGTCTCTAAGGAACAGAGCCTTCAGTATCAGTaGGTGTATGTCCCCGATGATTGGATAATGCATCAGAAGGCCAAG +
Preference number: 5 (lower is better)
Translates to: WISLWVSKEQSLQYQ*VYVPDDWIMHQKAK
Trigger: CTTGGCCTTCTGATGCATTATCCAATCATCGGGGACATACACTCACTGATACTGAAGGCTCTGTTCCTTAGAGACCCAAAGAGAAATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CAA 90 bp GGGGAAGTTGTGAAACCAACTTTTCCTTCTGAGTGTAAACTGGCAGAGCTGCTGTCTTTCATATATGAATaGAACGTCCCTTCAGTGTCT +
Preference number: 5 (lower is better)
Translates to: GEVVKPTFPSECKLAELLSFIYE*NVPSVS
Trigger: AGACACTGAAGGGACGTTCAATTCATATATGAAAGA...CAGCAGCTCTGCCAGTTTACACTCAGAAGGAAAAGTTGGTTTCACAACTTCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CAA 90 bp TTATGTCAAGGCTTTAAGTGGAATGCTTGCTGGAAGCCTTCTAGCAGGGATGGAAGTTTCTTTTCCCTTTaGACCATCATGCTCAAACGT +
Preference number: 5 (lower is better)
Translates to: LCQGFKWNACWKPSSRDGSFFSL*TIMLKR
Trigger: ACGTTTGAGCATGATGGTCAAAAGGGAAAAGAAACT...TCCATCCCTGCTAGAAGGCTTCCAGCAAGCATTCCACTTAAAGCCTTGACATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS-3UTR CAA 90 bp TTTACTTCACACTTCCAATCTGATCAGAGAGGACTGCATGAAACACAGAAATGTTGGTCCTGGATCTGGTaGACTTTTGTAACAATGGCA +
Preference number: 5 (lower is better)
Translates to: FTSHFQSDQRGLHETQKCWSWIW*TFVTMA
Trigger: TGCCATTGTTACAAAAGTCAACCAGATCCAGGACCA...ACATTTCTGTGTTTCATGCAGTCCTCTCTGATCAGATTGGAAGTGTGAAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
CDS-3UTR CAA 90 bp AGCTTAGGAAGCCCAGGGTCCAGAACTGTATTTGTGTCAAACAAGAATCTGATTTCTTTCATATATGAATaGAACGTCCCTTCAGTGTCT +
Preference number: 5 (lower is better)
Translates to: SLGSPGSRTVFVSNKNLISFIYE*NVPSVS
Trigger: AGACACTGAAGGGACGTTCAATTCATATATGAAAGA...AATCAGATTCTTGTTTGACACAAATACAGTTCTGGACCCTGGGCTTCCTAAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS CAA 90 bp GGGGTCGTTCCACCGGTGCACCCTGGCATCTCTGAAGAGGCCTGCTaGGCGGCCCTAGGAACTTGGCTGCCCTGGTCCTGGCCACTGGAG +
Preference number: 6 (lower is better)
Translates to: GVVPPVHPGISEEAC*AALGTWLPWSWPLE
Trigger: CTCCAGTGGCCAGGACCAGGGCAGCCAAGTTCCTAGGGCCGCCAAGCAGGCCTCTTCAGAGATGCCAGGGTGCACCGGTGGAACGACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS CAA 72 bp CCACCGGTGCACCCTGGCATCTCTGAAGAGGCCTGCTaGGCGGCCCTAGGAACTTGGCTGCCCTGGTCCTGG +
Preference number: 6 (lower is better)
Translates to: PPVHPGISEEAC*AALGTWLPWSW
Trigger: CCAGGACCAGGGCAGCCAAGTTCCTAGGGCCGCCAAGCAGGCCTCTTCAGAGATGCCAGGGTGCACCGGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS GCA 72 bp GTTCCACCGGTGCACCCTGGCATCTCTGAAGAGGCCTaGTTGGCGGCCCTAGGAACTTGGCTGCCCTGGTCC +
Preference number: 6 (lower is better)
Translates to: VPPVHPGISEEA*LAALGTWLPWS
Trigger: GGACCAGGGCAGCCAAGTTCCTAGGGCCGCCAAGCAGGCCTCTTCAGAGATGCCAGGGTGCACCGGTGGAAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS CAA 90 bp GTGGAGGTCCTGGTGGGGATGGCAGCAGAGAAGGAACTGCTGCTGTaGTTTCCGGGTACAGGGCCACCCATACTGCCCGGAGCTGAGGCT +
Preference number: 6 (lower is better)
Translates to: VEVLVGMAAEKELLL*FPGTGPPILPGAEA
Trigger: AGCCTCAGCTCCGGGCAGTATGGGTGGCCCTGTACCCGGAAACAACAGCAGCAGTTCCTTCTCTGCTGCCATCCCCACCAGGACCTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS TCA 72 bp TGCTGGTGCTGCTGCTGCTGTTGCTGCTGCAGCAAATaGTGCCTTGGGGCTTCTGTGGAGGTCCTGGTGGGG +
Preference number: 6 (lower is better)
Translates to: CWCCCCCCCCSK*CLGASVEVLVG
Trigger: CCCCACCAGGACCTCCACAGAAGCCCCAAGGCATCATTTGCTGCAGCAGCAACAGCAGCAGCAGCACCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS CAA 90 bp CTGCTGTGGTTGCTGCTGCTGCTGCTGCTGGTGCTGCTGCTGCTGTaGCTGCTGCAGCAAATGATGCCTTGGGGCTTCTGTGGAGGTCCT +
Preference number: 6 (lower is better)
Translates to: LLWLLLLLLLVLLLL*LLQQMMPWGFCGGP
Trigger: AGGACCTCCACAGAAGCCCCAAGGCATCATTTGCTGCAGCAGCAACAGCAGCAGCAGCACCAGCAGCAGCAGCAGCAGCAACCACAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS GCA 72 bp TGGAGGTCCTGGTGGGGATGGCAGCAGAGAAGGAACTaGTGCTGTTGTTTCCGGGTACAGGGCCACCCATAC +
Preference number: 6 (lower is better)
Translates to: WRSWWGWQQRRN*CCCFRVQGHPY
Trigger: GTATGGGTGGCCCTGTACCCGGAAACAACAGCAGCAGTTCCTTCTCTGCTGCCATCCCCACCAGGACCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS CCA 72 bp GATGCCTTGGGGCTTCTGTGGAGGTCCTGGTGGGGATaGCAGCAGAGAAGGAACTGCTGCTGTTGTTTCCGG +
Preference number: 6 (lower is better)
Translates to: DALGLLWRSWWG*QQRRNCCCCFR
Trigger: CCGGAAACAACAGCAGCAGTTCCTTCTCTGCTGCCATCCCCACCAGGACCTCCACAGAAGCCCCAAGGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS GCA 72 bp CCCAGACCACCAGCAGGTCCTGCAGAGGGAACTCTCTaGCAAACAGCAGCCGCACCCATCGTAACCCATATA +
Preference number: 6 (lower is better)
Translates to: PRPPAGPAEGTL*QTAAAPIVTHI
Trigger: TATATGGGTTACGATGGGTGCGGCTGCTGTTTGGCAGAGAGTTCCCTCTGCAGGACCTGCTGGTGGTCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS GCA 72 bp TGCTGCTGTTGTTTCCGGGTACAGGGCCACCCATACTaGCCGGAGCTGAGGCTGGGGAAATCAGCTTTCTTC +
Preference number: 6 (lower is better)
Translates to: CCCCFRVQGHPY*PELRLGKSAFF
Trigger: GAAGAAAGCTGATTTCCCCAGCCTCAGCTCCGGGCAGTATGGGTGGCCCTGTACCCGGAAACAACAGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS CAA 90 bp CTGTACCGGCATGCTTTCAGATTTCATCAGTCTCTGCTGCTGCTGTaGCTGCTGGTGTTGCTGCTGCTGCTGCTGTGGTTGCTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: LYRHAFRFHQSLLLL*LLVLLLLLLWLLLL
Trigger: CAGCAGCAGCAACCACAGCAGCAGCAGCAGCAACACCAGCAGCAACAGCAGCAGCAGAGACTGATGAAATCTGAAAGCATGCCGGTACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS TCA 72 bp GTTTCCGGGTACAGGGCCACCCATACTGCCCGGAGCTaGGGCTGGGGAAATCAGCTTTCTTCCAAAGTTAAT +
Preference number: 6 (lower is better)
Translates to: VSGYRATHTARS*GWGNQLSSKVN
Trigger: ATTAACTTTGGAAGAAAGCTGATTTCCCCAGCCTCAGCTCCGGGCAGTATGGGTGGCCCTGTACCCGGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS GCA 72 bp ACCGGCATGCTTTCAGATTTCATCAGTCTCTGCTGCTaGTGTTGCTGCTGGTGTTGCTGCTGCTGCTGCTGT +
Preference number: 6 (lower is better)
Translates to: TGMLSDFISLCC*CCCWCCCCCCC
Trigger: ACAGCAGCAGCAGCAGCAACACCAGCAGCAACAGCAGCAGCAGAGACTGATGAAATCTGAAAGCATGCCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS CCA 72 bp CTGGGCTGTGCAGACTCGCTGGCATGTAGAAAAGCTTaGTGGTCACAGTGGAGGGTAAAGATGATAGGCGCT +
Preference number: 6 (lower is better)
Translates to: LGCADSLACRKA*WSQWRVKMIGA
Trigger: AGCGCCTATCATCTTTACCCTCCACTGTGACCACCAAGCTTTTCTACATGCCAGCGAGTCTGCACAGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS GCA 72 bp AACTGTACCGGCATGCTTTCAGATTTCATCAGTCTCTaGTGCTGCTGTTGCTGCTGGTGTTGCTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: NCTGMLSDFISL*CCCCCWCCCCC
Trigger: GCAGCAGCAGCAACACCAGCAGCAACAGCAGCAGCAGAGACTGATGAAATCTGAAAGCATGCCGGTACAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS CCA 72 bp GAGTTTTCATTTCCTCACTGGGCTGTGCAGACTCGCTaGCATGTAGAAAAGCTTGGTGGTCACAGTGGAGGG +
Preference number: 6 (lower is better)
Translates to: EFSFPHWAVQTR*HVEKLGGHSGG
Trigger: CCCTCCACTGTGACCACCAAGCTTTTCTACATGCCAGCGAGTCTGCACAGCCCAGTGAGGAAATGAAAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS TCA 72 bp TGGAGGTCAGTTAGAGCCTGGACAGGAACAGAAACCTaGGCATCGCTTCCTGTAACTACGTCGCCTTTGTTC +
Preference number: 6 (lower is better)
Translates to: WRSVRAWTGTET*ASLPVTTSPLF
Trigger: GAACAAAGGCGACGTAGTTACAGGAAGCGATGCTCAGGTTTCTGTTCCTGTCCAGGCTCTAACTGACCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224528.2
CDS CCA 72 bp TCCTGTGATAGGGGGTTGTTGATCATCAGATCCTGCTaGCCGGCAGCCTTCCTTGGGTTAGTGATGTGTATT +
Preference number: 6 (lower is better)
Translates to: SCDRGLLIIRSC*PAAFLGLVMCI
Trigger: AATACACATCACTAACCCAAGGAAGGCTGCCGGCCAGCAGGATCTGATGATCAACAACCCCCTATCACAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS CCA 72 bp GACTCGCTGGCATGTAGAAAAGCTTGGTGGTCACAGTaGAGGGTAAAGATGATAGGCGCTAGTAGCTCATGC +
Preference number: 6 (lower is better)
Translates to: DSLACRKAWWSQ*RVKMIGASSSC
Trigger: GCATGAGCTACTAGCGCCTATCATCTTTACCCTCCACTGTGACCACCAAGCTTTTCTACATGCCAGCGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS CAA 90 bp AAGAACTTGTTCCAAAGACTTCCTTCATCCTGTGATAGGGGGTTGTaGATCATCAGATCCTGCTGGCCGGCAGCCTTCCTTGGGTTAGTG +
Preference number: 6 (lower is better)
Translates to: KNLFQRLPSSCDRGL*IIRSCWPAAFLGLV
Trigger: CACTAACCCAAGGAAGGCTGCCGGCCAGCAGGATCTGATGATCAACAACCCCCTATCACAGGATGAAGGAAGTCTTTGGAACAAGTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS CAA 90 bp GCTGAGGCTGGGGAAATCAGCTTTCTTCCAAAGTTAATCAAGCTGTaGGAGACCTTGTGTATATTCAGGGGAGCACCTCTGGCATTGGTC +
Preference number: 6 (lower is better)
Translates to: AEAGEISFLPKLIKL*ETLCIFRGAPLALV
Trigger: GACCAATGCCAGAGGTGCTCCCCTGAATATACACAAGGTCTCCAACAGCTTGATTAACTTTGGAAGAAAGCTGATTTCCCCAGCCTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS CAA 90 bp GCGATGGTAATCTGCTCATTCTCGCCAGCCTCCAGCTGGCTCTGGTaGAAGCGCAGGGAACCTTTCAGAATGTCTTTGATCTGTTTTAAT +
Preference number: 6 (lower is better)
Translates to: AMVICSFSPASSWLW*KRREPFRMSLICFN
Trigger: ATTAAAACAGATCAAAGACATTCTGAAAGGTTCCCTGCGCTTCAACCAGAGCCAGCTGGAGGCTGGCGAGAATGAGCAGATTACCATCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS TCA 72 bp TTCTCTTCCCCCAGGCAAACTCTCGATACTTGGAGATaGACTGATGGTTTTCGAACTTTGCCCTTGGAGGTC +
Preference number: 6 (lower is better)
Translates to: FSSPRQTLDTWR*TDGFRTLPLEV
Trigger: GACCTCCAAGGGCAAAGTTCGAAAACCATCAGTTCATCTCCAAGTATCGAGAGTTTGCCTGGGGGAAGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000224528.2
CDS TCA 72 bp ACAGAGCCTTCAGTATCAGTGAGTGTATGTCCCCGATaGTTGGATAATGCATCAGAAGGCCAAGACAGGTCT +
Preference number: 6 (lower is better)
Translates to: TEPSVSVSVCPR*LDNASEGQDRS
Trigger: AGACCTGTCTTGGCCTTCTGATGCATTATCCAATCATCGGGGACATACACTCACTGATACTGAAGGCTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS TCA 72 bp TTCTTCAGACTCTTTCCTGCCCATGGTTTTGCTGTGTaGACGGGAACGTGCGATGTTGCTGAAAAAGGAATC +
Preference number: 6 (lower is better)
Translates to: FFRLFPAHGFAV*TGTCDVAEKGI
Trigger: GATTCCTTTTTCAGCAACATCGCACGTTCCCGTTCACACAGCAAAACCATGGGCAGGAAAGAGTCTGAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS TCA 72 bp TTCCCCCAGGCAAACTCTCGATACTTGGAGATGAACTaGTGGTTTTCGAACTTTGCCCTTGGAGGTCAGTTA +
Preference number: 6 (lower is better)
Translates to: FPQANSRYLEMN*WFSNFALGGQL
Trigger: TAACTGACCTCCAAGGGCAAAGTTCGAAAACCATCAGTTCATCTCCAAGTATCGAGAGTTTGCCTGGGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000224528.2
CDS CAA 72 bp TCTAGTTCTTCTTCAGACTCTTTCCTGCCCATGGTTTaGCTGTGTGAACGGGAACGTGCGATGTTGCTGAAA +
Preference number: 6 (lower is better)
Translates to: SSSSSDSFLPMV*LCERERAMLLK
Trigger: TTTCAGCAACATCGCACGTTCCCGTTCACACAGCAAAACCATGGGCAGGAAAGAGTCTGAAGAAGAACTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS CAA 72 bp TTTACAAGATGCATGTCCATGACCTTTGCACAGTACTaGCACATGGCATCCAGGTCATTCAGCTGGCCTTGT +
Preference number: 6 (lower is better)
Translates to: FTRCMSMTFAQY*HMASRSFSWPC
Trigger: ACAAGGCCAGCTGAATGACCTGGATGCCATGTGCAAGTACTGTGCAAAGGTCATGGACATGCATCTTGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS CAA 72 bp AGCTTTCTTCCAAAGTTAATCAAGCTGTTGGAGACCTaGTGTATATTCAGGGGAGCACCTCTGGCATTGGTC +
Preference number: 6 (lower is better)
Translates to: SFLPKLIKLLET*CIFRGAPLALV
Trigger: GACCAATGCCAGAGGTGCTCCCCTGAATATACACAAGGTCTCCAACAGCTTGATTAACTTTGGAAGAAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS CAA 72 bp GGGGAAATCAGCTTTCTTCCAAAGTTAATCAAGCTGTaGGAGACCTTGTGTATATTCAGGGGAGCACCTCTG +
Preference number: 6 (lower is better)
Translates to: GEISFLPKLIKL*ETLCIFRGAPL
Trigger: CAGAGGTGCTCCCCTGAATATACACAAGGTCTCCAACAGCTTGATTAACTTTGGAAGAAAGCTGATTTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS TCA 72 bp TTCCCCCAGGCAAACTCTCGATACTTGGAGATGAACTaGTGGTTTTCGAACTTTGCCCTTTGTTCAACTGTA +
Preference number: 6 (lower is better)
Translates to: FPQANSRYLEMN*WFSNFALCSTV
Trigger: TACAGTTGAACAAAGGGCAAAGTTCGAAAACCATCAGTTCATCTCCAAGTATCGAGAGTTTGCCTGGGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
CDS TCA 72 bp TTCTCTTCCCCCAGGCAAACTCTCGATACTTGGAGATaGACTGATGGTTTTCGAACTTTGCCCTTTGTTCAA +
Preference number: 6 (lower is better)
Translates to: FSSPRQTLDTWR*TDGFRTLPFVQ
Trigger: TTGAACAAAGGGCAAAGTTCGAAAACCATCAGTTCATCTCCAAGTATCGAGAGTTTGCCTGGGGGAAGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
CDS GCA 72 bp TTTTCGAACTTTGCCCTTTGTTCAACTGTACCGGCATaGTTTCAGATTTCATCAGTCTCTGCTGCTGCTGTT +
Preference number: 6 (lower is better)
Translates to: FSNFALCSTVPA*FQISSVSAAAV
Trigger: AACAGCAGCAGCAGAGACTGATGAAATCTGAAAGCATGCCGGTACAGTTGAACAAAGGGCAAAGTTCGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024717.10
CDS CCA 72 bp GTTGATCATCAGATCCTGCTGGCCGGCAGCCTTCCTTaGGTTAGTGATGTGTATTTCTTTAATACTGCTATA +
Preference number: 6 (lower is better)
Translates to: VDHQILLAGSLP*VSDVYFFNTAI
Trigger: TATAGCAGTATTAAAGAAATACACATCACTAACCCAAGGAAGGCTGCCGGCCAGCAGGATCTGATGATCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS TCA 72 bp ATACCACATCTTGAATGTTTACAAGATGCATGTCCATaGCCTTTGCACAGTACTTGCACATGGCATCCAGGT +
Preference number: 6 (lower is better)
Translates to: IPHLECLQDACP*PLHSTCTWHPG
Trigger: ACCTGGATGCCATGTGCAAGTACTGTGCAAAGGTCATGGACATGCATCTTGTAAACATTCAAGATGTGGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS GCA 72 bp ATCTTGAATGTTTACAAGATGCATGTCCATGACCTTTaGACAGTACTTGCACATGGCATCCAGGTCATTCAG +
Preference number: 6 (lower is better)
Translates to: ILNVYKMHVHDL*TVLAHGIQVIQ
Trigger: CTGAATGACCTGGATGCCATGTGCAAGTACTGTGCAAAGGTCATGGACATGCATCTTGTAAACATTCAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS CAA 72 bp ATATCATGTTTCTTCAGTAGATGGTCCTGGATCTGGTaGACTTTTGTAACAATGGCAACTGTTGGCCCTAAA +
Preference number: 6 (lower is better)
Translates to: ISCFFSRWSWIW*TFVTMATVGPK
Trigger: TTTAGGGCCAACAGTTGCCATTGTTACAAAAGTCAACCAGATCCAGGACCATCTACTGAAGAAACATGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS TCA 72 bp CTTGTTGGAAAAACTGCATTTCAGGAAACGTTCTTTTaGCATCTTGCTCAATCATGGACCGTAGTTCTTTAT +
Preference number: 6 (lower is better)
Translates to: LVGKTAFQETFF*HLAQSWTVVLY
Trigger: ATAAAGAACTACGGTCCATGATTGAGCAAGATGTCAAAAGAACGTTTCCTGAAATGCAGTTTTTCCAACAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2
CDS TCA 72 bp TTTGACTTAGATCTCCTCTTGTTTTATTTGAATAACTaGACAAGGGGTCAATGCCTACTTCTTGTTCTTCTG +
Preference number: 6 (lower is better)
Translates to: FDLDLLLFYLNN*TRGQCLLLVLL
Trigger: CAGAAGAACAAGAAGTAGGCATTGACCCCTTGTTCAGTTATTCAAATAAAACAAGAGGAGATCTAAGTCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024717.10
ENSMUST00000224528.2