Pregenerated sensors for TBC1D31 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022364Ensembl transcript IDs: ENSMUST00000022992.13, ENSMUST00000159775.8, ENSMUST00000161329.2
Found 180 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACATTCAAAAACCGCAAGACTTTGGGATGGTATTCAGAAGTGCTGTaGACAATGTTCACTATAATTGCTGTTCATCTTTATGGAGTTTCA | + |
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Preference number: 1 (lower is better) Translates to: TFKNRKTLGWYSEVL*TMFTIIAVHLYGVS Trigger: TGAAACTCCATAAAGATGAACAGCAATTATAGTGAACATTGTTCACAGCACTTCTGAATACCATCCCAAAGTCTTGCGGTTTTTGAATGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159775.8 |
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| 3UTR-3UTR CCA 90 bp | AACAAGATTAAACCTGTTTCCATGCAAGTCAAAAACATAGATGTTTCCCTGATGTGCTGTTCATCTTTATaGAGTTTCATGGTGTTGAAA | + |
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Preference number: 2 (lower is better) Translates to: NKIKPVSMQVKNIDVSLMCCSSL*SFMVLK Trigger: TTTCAACACCATGAAACTCCATAAAGATGAACAGCA...CATCAGGGAAACATCTATGTTTTTGACTTGCATGGAAACAGGTTTAATCTTGTT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159775.8 |
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| 3UTR TCA 72 bp | AACCGCAAGACTTTGGGATGGTATTCAGAAGTGCTGTaGACAATGTTCACTATAATTGCTGTTCATCTTTAT | + |
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Preference number: 3 (lower is better) Translates to: NRKTLGWYSEVL*TMFTIIAVHLY Trigger: ATAAAGATGAACAGCAATTATAGTGAACATTGTTCACAGCACTTCTGAATACCATCCCAAAGTCTTGCGGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159775.8 |
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| CDS-3UTR TCA 90 bp | AGCCACATTCAAAAACCGCAAGACTTTGGGATGGTATTCAGAAGTGCTGTGAACTCCCTGGAGCCGTCGTaGGTGGCTGGCGATGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: SHIQKPQDFGMVFRSAVNSLEPS*VAGDGL Trigger: CAAGCCATCGCCAGCCACTCACGACGGCTCCAGGGA...GTTCACAGCACTTCTGAATACCATCCCAAAGTCTTGCGGTTTTTGAATGTGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159775.8 |
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| CDS-3UTR GCA 90 bp | CAAAAGCCACATTCAAAAACCGCAAGACTTTGGGATGGTATTCAGAAGTGCTGTTGCCGCTCTCCTTGTTaGCCAGGTCAGTGCTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: QKPHSKTARLWDGIQKCCCRSPC*PGQCSA Trigger: TGCAGAGCACTGACCTGGGCAACAAGGAGAGCGGCA...ACAGCACTTCTGAATACCATCCCAAAGTCTTGCGGTTTTTGAATGTGGCTTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159775.8 |
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| CDS-3UTR GCA 90 bp | AGCCACATTCAAAAACCGCAAGACTTTGGGATGGTATTCAGAAGTGCTGTGAACTGCGGTGCCATATCTTaGCGCTCTCCTTGTTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: SHIQKPQDFGMVFRSAVNCGAIS*RSPCCP Trigger: TGGGCAACAAGGAGAGCGGCAAGATATGGCACCGCA...GTTCACAGCACTTCTGAATACCATCCCAAAGTCTTGCGGTTTTTGAATGTGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159775.8 |
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| CDS-3UTR TCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCTCCGAGCCCGGGCTGTaGGTCTCCTGCGAAGATCTC | + |
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Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSSEPGL*VSCEDL Trigger: GAGATCTTCGCAGGAGACTCACAGCCCGGGCTCGGA...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022992.13 ENSMUST00000161329.2 |
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| CDS-3UTR GCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCCCCTCTGCGCCCTTCTaGCCCCCATCTGGCTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSPSAPF*PPSGCS Trigger: AGAACAGCCAGATGGGGGGCAGAAGGGCGCAGAGGG...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000161329.2 |
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| CDS-3UTR GCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCGGCGATGGCTTGCGGTaGCATATCTTGCCGCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSGDGLR*HILPLS Trigger: GGAGAGCGGCAAGATATGGCACCGCAAGCCATCGCC...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS-3UTR GCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCTGGCTGGCGATGGCTTaGGGTGCCATATCTTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSWLAMA*GAISCR Trigger: GCGGCAAGATATGGCACCGCAAGCCATCGCCAGCCA...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS-3UTR GCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCACCTCTGCGCCCTTCTaGCCCCCATCTGGCTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSTSAPF*PPSGCS Trigger: AGAACAGCCAGATGGGGGGCAGAAGGGCGCAGAGGT...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS-3UTR GCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCTGCCGCTCTCCTTGTTaGCCAGGTCAGTGCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSCRSPC*PGQCSA Trigger: TGCAGAGCACTGACCTGGGCAACAAGGAGAGCGGCA...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS-3UTR GCA 90 bp | AACAAGATTAAACCTGTTTCCATGCAAGTCAAAAACATAGATGTTTCCCTGATGTGGCTGGCGATGGCTTaGGGTGCCATATCTTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: NKIKPVSMQVKNIDVSLMWLAMA*GAISCR Trigger: GCGGCAAGATATGGCACCGCAAGCCATCGCCAGCCA...CATCAGGGAAACATCTATGTTTTTGACTTGCATGGAAACAGGTTTAATCTTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159775.8 |
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| CDS-3UTR TCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCGATGGTCCCCAGCAATaGAGGAATCGCCTGAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSDGPQQ*RNRLSH Trigger: ATGGCTCAGGCGATTCCTTCATTGCTGGGGACCATC...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS-3UTR TCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCTCCAAGTCCCAGAGCTaGGCTGTGTCAGAGGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSSKSQS*AVSEEV Trigger: CACTTCCTCTGACACAGCTCAGCTCTGGGACTTGGA...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS-3UTR GCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCTGCGGTGCCATATCTTaGCGCTCTCCTTGTTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSCGAIS*RSPCCP Trigger: TGGGCAACAAGGAGAGCGGCAAGATATGGCACCGCA...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS-3UTR CCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCGTGAGTGGCTGGCGATaGCTTGCGGTGCCATATCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSVSGWR*LAVPYL Trigger: AAGATATGGCACCGCAAGCCATCGCCAGCCACTCAC...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS-3UTR CCA 90 bp | GCTGTGAACAATGTTCACTATAATTGCTGTTCATCTTTATGGAGTTTCATGGTGGTGAGTGGCTGGCGATaGCTTGCGGTGCCATATCTT | + |
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Preference number: 4 (lower is better) Translates to: AVNNVHYNCCSSLWSFMVVSGWR*LAVPYL Trigger: AAGATATGGCACCGCAAGCCATCGCCAGCCACTCAC...CACCATGAAACTCCATAAAGATGAACAGCAATTATAGTGAACATTGTTCACAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159775.8 |
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| CDS-3UTR CCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCGCCGCTTTCCGCCTATaGGCATCTGTATCTTCTCGG | + |
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Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSAAFRL*ASVSSR Trigger: CCGAGAAGATACAGATGCCCATAGGCGGAAAGCGGC...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022992.13 ENSMUST00000161329.2 |
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| CDS-3UTR CCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCTCTCACGGAGGAGAGTaGCGACGTCATAGTAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSSHGGE*RRHSSP Trigger: AGGGCTACTATGACGTCGCCACTCTCCTCCGTGAGA...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161329.2 |
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| CDS-3UTR TCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCTGTCAGAGGAAGTGGTaGTGGCGTATCTCCCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSCQRKW*WRISQM Trigger: CATCTGGGAGATACGCCATCACCACTTCCTCTGACA...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS-3UTR GCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCTTTCATCCTCCAGCCTaGGCAGCTCCATTTCCCGTT | + |
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Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSFHPPA*AAPFPV Trigger: AACGGGAAATGGAGCTGCGCAGGCTGGAGGATGAAA...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS-3UTR GCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCGCATTCAGGCAGGCTTaGTCGGCCTTTGCCAAATTG | + |
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Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSAFRQA*SAFAKL Trigger: CAATTTGGCAAAGGCCGAGCAAGCCTGCCTGAATGC...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161329.2 |
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| CDS-3UTR CCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCTGTATGCCCACCGACTaGCGGATGTTCAGCTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSCMPTD*RMFSFL Trigger: GAGAAAGCTGAACATCCGCCAGTCGGTGGGCATACA...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS-3UTR CCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCAGCAGCTCCTGCTTCTaGTACCACGCCTCATCCTTA | + |
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Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSSSSCF*YHASSL Trigger: TAAGGATGAGGCGTGGTACCAGAAGCAGGAGCTGCT...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS-3UTR CCA 90 bp | GCTGTGAACAATGTTCACTATAATTGCTGTTCATCTTTATGGAGTTTCATGGTGCCAGTGACGGGGCGTTaGAAACATAGACAGTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: AVNNVHYNCCSSLWSFMVPVTGR*KHRQFP Trigger: AGGGAACTGTCTATGTTTCCAACGCCCCGTCACTGG...CACCATGAAACTCCATAAAGATGAACAGCAATTATAGTGAACATTGTTCACAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159775.8 |
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| CDS-3UTR TCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCCACCACAAATGCAGGTaGTTGGATTTGCCTCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSHHKCR*LDLPPA Trigger: TGCTGGAGGCAAATCCAATCACCTGCATTTGTGGTG...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS-3UTR TCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCACCTTCGCAGGCATCTaGATGATTCTGAAGAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSTFAGI*MILKSP Trigger: AGGGCTCTTCAGAATCATTCAGATGCCTGCGAAGGT...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS-3UTR TCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCGGTATGGTGTGTCACTaGAGATTGCAGACCAGTGAG | + |
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Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSGMVCH*RLQTSE Trigger: CTCACTGGTCTGCAATCTTCAGTGACACACCATACC...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS-3UTR TCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCTCTCGTCAGCACTTCTaGGAACAGTGTTTCCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSSRQHF*EQCFQE Trigger: CTCCTGGAAACACTGTTCTCAGAAGTGCTGACGAGA...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS-3UTR GCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCAGAAAACCTTCTGTATaGCCACCGACTGGCGGATGT | + |
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Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSRKPSV*PPTGGC Trigger: ACATCCGCCAGTCGGTGGGCATACAGAAGGTTTTCT...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS-3UTR GCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCGCAGGTGATTGGATTTaGCTCCAGCAGCCAAGATTC | + |
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Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSAGDWI*LQQPRF Trigger: GAATCTTGGCTGCTGGAGGCAAATCCAATCACCTGC...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS-3UTR GCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCGCTTCGAGTTCCAGCTaGCTTATTTCCAGGTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSASSSS*LISRSL Trigger: CAAGGACCTGGAAATAAGGCAGCTGGAACTCGAAGC...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS-3UTR TCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCCGCATAATCCCATCTTaGCTTAGCACACCAAGAACC | + |
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Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSRIIPS*LSTPRT Trigger: GGTTCTTGGTGTGCTAAGTCAAGATGGGATTATGCG...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS-3UTR TCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCATTTCTTCTGAAGGCTaGGATAAGCCGCATGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSISSEG*DKPHES Trigger: GGACTCATGCGGCTTATCTCAGCCTTCAGAAGAAAT...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS-3UTR TCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCAAGATTGCAGACCAGTaGGCTAATGCAGAGAGGGTT | + |
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Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSKIADQ*ANAERV Trigger: AACCCTCTCTGCATTAGCTCACTGGTCTGCAATCTT...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS-3UTR TCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCAGGAGGAAGGAAGGGTaGTTGGAGAAGATGTTATCG | + |
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Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSRRKEG*LEKMLS Trigger: CGATAACATCTTCTCCAATCACCCTTCCTTCCTCCT...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS-3UTR GCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCAGCTGTGCACGCTTGTaGTGTTCGCTGAACAAGATT | + |
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Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSSCARL*CSLNKI Trigger: AATCTTGTTCAGCGAACAGCACAAGCGTGCACAGCT...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS-3UTR GCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCGCTGAGTCCATGTACTaGCTTTGCAACCAAGGCATT | + |
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Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSAESMY*LCNQGI Trigger: AATGCCTTGGTTGCAAAGGCAGTACATGGACTCAGC...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022992.13 ENSMUST00000161329.2 |
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| CDS-3UTR CCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCGCCCTCAGGTGGACCTaGCAATTGGTATTTGCAAAA | + |
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Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSALRWT*QLVFAK Trigger: TTTTGCAAATACCAATTGCCAGGTCCACCTGAGGGC...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS-3UTR CCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCGTTAGAGCCCTCAGGTaGACCTGGCAATTGGTATTT | + |
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Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSVRALR*TWQLVF Trigger: AAATACCAATTGCCAGGTCCACCTGAGGGCTCTAAC...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS-3UTR CCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCACAAATGCAGGTGATTaGATTTGCCTCCAGCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSTNAGD*ICLQQP Trigger: TGGCTGCTGGAGGCAAATCCAATCACCTGCATTTGT...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS-3UTR CCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCGGCCAGGCATACACCTaGGAAGTTATATCACGATCT | + |
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Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSGQAYT*EVISRS Trigger: AGATCGTGATATAACTTCCCAGGTGTATGCCTGGCC...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS-3UTR CCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCATCCAGCATGCTATTTaGGTGGATATCAGCAGGCGT | + |
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Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSIQHAI*VDISRR Trigger: ACGCCTGCTGATATCCACCCAAATAGCATGCTGGAT...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS-3UTR TCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCAATGAAGGAATCGCCTaGGCCATCAAAAGCCACATT | + |
|
Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSNEGIA*AIKSHI Trigger: AATGTGGCTTTTGATGGCTCAGGCGATTCCTTCATT...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR TCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCTTATATCACGATCTATaGAGTGCTGCAGCAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSLYHDL*SAAAAP Trigger: AGGAGCTGCTGCAGCACTTCATAGATCGTGATATAA...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR TCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCTTGGCAACAGCCTCTTaGCTTGTAGTAAGATCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSLATAS*LVVRSF Trigger: GAAGGATCTTACTACAAGTCAAGAGGCTGTTGCCAA...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022992.13 ENSMUST00000161329.2 |
||
| CDS-3UTR TCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCTGCTTATGTAAAGTCTaGATCTGCCAGTCGGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSCLCKV*ICQSAF Trigger: GAATGCCGACTGGCAGATTCAGACTTTACATAAGCA...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161329.2 |
||
| CDS-3UTR GCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCGCAGAGAGGGTTCTCTaGAATACTCTCAGTAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSAERVL*NTLSSF Trigger: GAAACTACTGAGAGTATTGCAGAGAACCCTCTCTGC...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR GCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCCGAAAGCATCCAGCATaGTATTTGGGTGGATATCAG | + |
|
Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSRKHPA*YLGGYQ Trigger: CTGATATCCACCCAAATAGCATGCTGGATGCTTTCG...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR GCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCATAAAGTCGCTTTTGTaGTTCGAGTTCCAGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSIKSLL*FEFQLP Trigger: AGGCAGCTGGAACTCGAAGCACAAAAGCGACTTTAT...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR GCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCGCTGCACTTGTCTCCTaGCTTAAAAACCACTTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSAALVS*LKNHFR Trigger: TCGAAAGTGGTTTTTAAGGCAGGAGACAAGTGCAGC...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000022992.13 ENSMUST00000161329.2 |
||
| CDS-3UTR CCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCAGCTTTCTCTTCCTCTaGAAAGTATCCAAGTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSSFLFL*KVSKSQ Trigger: CTGGGACTTGGATACTTTCCAGAGGAAGAGAAAGCT...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR CCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCAGATTCGGCCATCTCTaGTCACAGCAAACACTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSRFGHL*SQQTLC Trigger: ACAAAGTGTTTGCTGTGACCAGAGATGGCCGAATCT...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR CCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCCACCAAGAACCTGATTaGAACCGGCATCAAAGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSHQEPD*NRHQSY Trigger: ATAGCTTTGATGCCGGTTCCAATCAGGTTCTTGGTG...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR CCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCTTATTTCCAGGTCCTTaGCTGTGGCAGCGATTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSLFPGP*LWQRFL Trigger: AAGAAATCGCTGCCACAGCCAAGGACCTGGAAATAA...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR CCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCCTTCTCGGATTTCTTTaGCAACAGCCTCTTGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSLLGFL*QQPLDL Trigger: CAAGTCAAGAGGCTGTTGCCAAAGAAATCCGAGAAG...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022992.13 ENSMUST00000161329.2 |
||
| CDS-3UTR TCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCGCTTGTGCTGTTCGCTaGACAAGATTAAACCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSACAVR*TRLNLF Trigger: AAACAGGTTTAATCTTGTTCAGCGAACAGCACAAGC...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR TCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCGTGTGGACTAATTACTaGCGAGCTAATTCCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSVWTNY*RANSFF Trigger: GAAGAAGGAATTAGCTCGTCAGTAATTAGTCCACAC...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR TCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCGTGGCAGCGATTTCTTaGTCTCTCATTTGTACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSVAAIS*SLICTF Trigger: AAAGGTACAAATGAGAGATCAAGAAATCGCTGCCAC...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR GCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCATTTTCCATAATGGATaGTATGTACCGACCGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSIFHNG*YVPTVW Trigger: CCACACGGTCGGTACATAGCATCCATTATGGAAAAT...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR GCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCCCCTGGTTGGAATTTTaGTCTCTTTACATCTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSPWLEF*SLYILQ Trigger: CTGCAAGATGTAAAGAGAGCAAAATTCCAACCAGGG...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR GCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCTTAAATATAGGGTACTaGCCTTTCGTCAGTGCAACG | + |
|
Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSLNIGY*PFVSAT Trigger: CGTTGCACTGACGAAAGGGCAGTACCCTATATTTAA...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR GCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCTCCATGTACTGCCTTTaGAACCAAGGCATTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSSMYCL*NQGISS Trigger: TGAAGAAATGCCTTGGTTGCAAAGGCAGTACATGGA...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022992.13 ENSMUST00000161329.2 |
||
| CDS-3UTR CCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCGGTGGACCTGGCAATTaGTATTTGCAAAACAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSGGPGN*YLQNRV Trigger: TACTCTGTTTTGCAAATACCAATTGCCAGGTCCACC...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR CCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCCTTGAGCACCCTGGTTaGAATTTTGCTCTCTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSLEHPG*NFALFT Trigger: TGTAAAGAGAGCAAAATTCCAACCAGGGTGCTCAAG...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR TCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCAGCAGCTCCTTGTCATaGAATGCCAAAACATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSSSSLS*NAKTFS Trigger: AGAAAATGTTTTGGCATTTCATGACAAGGAGCTGCT...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR TCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCAGAGGCTTTCTTTGCTaGTTGCAAATGGAATTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSRGFLC*LQMEFL Trigger: AAGGAATTCCATTTGCAATCAGCAAAGAAAGCCTCT...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022992.13 ENSMUST00000161329.2 |
||
| CDS-3UTR GCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCATATTTTCAACTGTCTaGCTCTCTCTCAAGAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSIFSTV*LSLKKS Trigger: GGACTTCTTGAGAGAGAGGCAGACAGTTGAAAATAT...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR GCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCTCATCCACTTCAGCTTaGATATTTTCAACTGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSSSTSA*IFSTVC Trigger: GCAGACAGTTGAAAATATGCAAGCTGAAGTGGATGA...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR CCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCAACTCACTGTGTTACTaGGCAAATCTTCAATCACCT | + |
|
Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSNSLCY*ANLQSP Trigger: AGGTGATTGAAGATTTGCCCAGTAACACAGTGAGTT...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR CCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCTTTGCTGATTGCAAATaGAATTCCTTCTCTTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSFADCK*NSFSSA Trigger: AGCCGAAGAGAAGGAATTCCATTTGCAATCAGCAAA...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022992.13 ENSMUST00000161329.2 |
||
| CDS-3UTR TCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCATCTTCTCCTCTTCTTaGAGAAGTATCTCTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSIFSSS*RSISLL Trigger: AAGAAGAGAGATACTTCTTCAAGAAGAGGAGAAGAT...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR GCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCGATGGTATTCAGAAGTaGTGTGAACAATGTTCACTA | + |
|
Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSDGIQK*CEQCSL Trigger: TAGTGAACATTGTTCACAGCACTTCTGAATACCATC...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR GCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCGCTTTCTTTGCTGATTaGAAATGGAATTCCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSAFFAD*KWNSFS Trigger: AGAGAAGGAATTCCATTTGCAATCAGCAAAGAAAGC...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022992.13 ENSMUST00000161329.2 |
||
| CDS-3UTR GCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCCTGGCAATTGGTATTTaGAAAACAGAGTATCACATT | + |
|
Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSLAIGI*KTEYHI Trigger: AATGTGATACTCTGTTTTGCAAATACCAATTGCCAG...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR CCA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCCATTCTGTATTTTGTTaGATATTCCCCATAGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VSKNLYCERFQKPFTSQSHSVFC*IFPIAF Trigger: AAAGGCTATGGGGAATATCCAACAAAATACAGAATG...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS CCA 90 bp | GGGCGTTGGAAACATAGACAGTTCCCTGGAGCCGTCGTGAGTGGCTaGCGATGGCTTGCGGTGCCATATCTTGCCGCTCTCCTTGTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GRWKHRQFPGAVVSG*RWLAVPYLAALLVA Trigger: GGCAACAAGGAGAGCGGCAAGATATGGCACCGCAAGCCATCGCCAGCCACTCACGACGGCTCCAGGGAACTGTCTATGTTTCCAACGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159775.8 |
||
| CDS CCA 90 bp | TGGAAACATAGACAGTTCCCTGGAGCCGTCGTGAGTGGCTGGCGATaGCTTGCGGTGCCATATCTTGCCGCTCTCCTTGTTGCCCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: WKHRQFPGAVVSGWR*LAVPYLAALLVAQV Trigger: GACCTGGGCAACAAGGAGAGCGGCAAGATATGGCACCGCAAGCCATCGCCAGCCACTCACGACGGCTCCAGGGAACTGTCTATGTTTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159775.8 |
||
| CDS GCA 90 bp | GCTCGGCCTTTGCCAAATTGTCCTCCATCACCCTCTGCGCCCTTCTaGCCCCCATCTGGCTGTTCTCTAGCAGCTTCTGGAACATGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: ARPLPNCPPSPSAPF*PPSGCSLAASGTCV Trigger: AACACATGTTCCAGAAGCTGCTAGAGAACAGCCAGATGGGGGGCAGAAGGGCGCAGAGGGTGATGGAGGACAATTTGGCAAAGGCCGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161329.2 |
||
| CDS TCA 90 bp | GGCAGGAATTCCAGATGGCGAACAGCTCGTACCTTCGCAGGCATCTaGATGATTCTGAAGAGCCCTGTGGCCTCCAAGCACCACAAATGC | + |
|
Preference number: 5 (lower is better) Translates to: GRNSRWRTARTFAGI*MILKSPVASKHHKC Trigger: GCATTTGTGGTGCTTGGAGGCCACAGGGCTCTTCAGAATCATTCAGATGCCTGCGAAGGTACGAGCTGTTCGCCATCTGGAATTCCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS TCA 90 bp | GATGTTATCGAAGAGGCGGAGCCACTCCTCTCTCGTCAGCACTTCTaGGAACAGTGTTTCCAGGAGAGGCCAGGCATACACCTGGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: DVIEEAEPLLSRQHF*EQCFQERPGIHLGS Trigger: ACTTCCCAGGTGTATGCCTGGCCTCTCCTGGAAACACTGTTCTCAGAAGTGCTGACGAGAGAGGAGTGGCTCCGCCTCTTCGATAACATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS TCA 90 bp | GGAAAGTATCCAAGTCCCAGAGCTGAGCTGTGTCAGAGGAAGTGGTaGTGGCGTATCTCCCAGATGCGTGCACAGAAATGGAACACACCG | + |
|
Preference number: 5 (lower is better) Translates to: GKYPSPRAELCQRKW*WRISQMRAQKWNTP Trigger: CGGTGTGTTCCATTTCTGTGCACGCATCTGGGAGATACGCCATCACCACTTCCTCTGACACAGCTCAGCTCTGGGACTTGGATACTTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS TCA 90 bp | ATGATTCTGAAGAGCCCTGTGGCCTCCAAGCACCACAAATGCAGGTaGTTGGATTTGCCTCCAGCAGCCAAGATTCGGCCATCTCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: MILKSPVASKHHKCR*LDLPPAAKIRPSLV Trigger: GACCAGAGATGGCCGAATCTTGGCTGCTGGAGGCAAATCCAATCACCTGCATTTGTGGTGCTTGGAGGCCACAGGGCTCTTCAGAATCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS GCA 90 bp | AGAAGTATCTCTCTTCTTGTCTCCTCAGCTCTGCGGAGCAGCTCCTaGTTCTGGTACCACGCCTCATCCTTAGCTCTCTGCTCATCCACT | + |
|
Preference number: 5 (lower is better) Translates to: RSISLLVSSALRSSS*FWYHASSLALCSST Trigger: AGTGGATGAGCAGAGAGCTAAGGATGAGGCGTGGTACCAGAAGCAGGAGCTGCTCCGCAGAGCTGAGGAGACAAGAAGAGAGATACTTCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS CCA 90 bp | AGGTACTGTAGGCCACCACAGTCATCAGGAGGAAGGAAGGGTGATTaGAGAAGATGTTATCGAAGAGGCGGAGCCACTCCTCTCTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RYCRPPQSSGGRKGD*RRCYRRGGATPLSS Trigger: TGACGAGAGAGGAGTGGCTCCGCCTCTTCGATAACATCTTCTCCAATCACCCTTCCTTCCTCCTGATGACTGTGGTGGCCTACAGTACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS GCA 90 bp | CGGAGCAGCTCCTGCTTCTGGTACCACGCCTCATCCTTAGCTCTCTaGTCATCCACTTCAGCTTGCATATTTTCAACTGTCTGCCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RSSSCFWYHASSLAL*SSTSACIFSTVCLS Trigger: AGAGAGGCAGACAGTTGAAAATATGCAAGCTGAAGTGGATGAGCAGAGAGCTAAGGATGAGGCGTGGTACCAGAAGCAGGAGCTGCTCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR CAA 90 bp | CAAAAGCCACATTCAAAAACCGCAAGACTTTGGGATGGTATTCAGAAGTGCTGTTTGCCGCTCTCCTTGTaGCCCAGGTCAGTGCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QKPHSKTARLWDGIQKCCLPLSL*PRSVLC Trigger: GCAGAGCACTGACCTGGGCAACAAGGAGAGCGGCAA...ACAGCACTTCTGAATACCATCCCAAAGTCTTGCGGTTTTTGAATGTGGCTTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159775.8 |
||
| CDS-3UTR CAA 90 bp | TCCATGCAAGTCAAAAACATAGATGTTTCCCTGATGGTCCCCAGCAATGAAGGATTGCGGTGCCATATCTaGCCGCTCTCCTTGTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SMQVKNIDVSLMVPSNEGLRCHI*PLSLLP Trigger: GGGCAACAAGGAGAGCGGCAAGATATGGCACCGCAA...TCCTTCATTGCTGGGGACCATCAGGGAAACATCTATGTTTTTGACTTGCATGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159775.8 |
||
| CDS TCA 90 bp | GCCAAGAGTGGAAGGTATGGTGTGTCACTGAAGATTGCAGACCAGTaGGCTAATGCAGAGAGGGTTCTCTGCAATACTCTCAGTAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: AKSGRYGVSLKIADQ*ANAERVLCNTLSSF Trigger: GAAACTACTGAGAGTATTGCAGAGAACCCTCTCTGCATTAGCTCACTGGTCTGCAATCTTCAGTGACACACCATACCTTCCACTCTTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS GCA 90 bp | TGGTACCACGCCTCATCCTTAGCTCTCTGCTCATCCACTTCAGCTTaGATATTTTCAACTGTCTGCCTCTCTCTCAAGAAGTCCAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: WYHASSLALCSSTSA*IFSTVCLSLKKSSS Trigger: TGAACTGGACTTCTTGAGAGAGAGGCAGACAGTTGAAAATATGCAAGCTGAAGTGGATGAGCAGAGAGCTAAGGATGAGGCGTGGTACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS GCA 90 bp | AGCCTCTTGACTTGTAGTAAGATCCTTCTCATAAAGTCGCTTTTGTaGTTCGAGTTCCAGCTGCCTTATTTCCAGGTCCTTGGCTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SLLTCSKILLIKSLL*FEFQLPYFQVLGCG Trigger: GCCACAGCCAAGGACCTGGAAATAAGGCAGCTGGAACTCGAAGCACAAAAGCGACTTTATGAGAAGGATCTTACTACAAGTCAAGAGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS CCA 90 bp | GTACTGCCCTTTCGTCAGTGCAACGAAAGCATCCAGCATGCTATTTaGGTGGATATCAGCAGGCGTTGTCTCCATGAGATGATAAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: VLPFRQCNESIQHAI*VDISRRCLHEMINF Trigger: GAAGTTTATCATCTCATGGAGACAACGCCTGCTGATATCCACCCAAATAGCATGCTGGATGCTTTCGTTGCACTGACGAAAGGGCAGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS CCA 90 bp | GTCGCTTTTGTGCTTCGAGTTCCAGCTGCCTTATTTCCAGGTCCTTaGCTGTGGCAGCGATTTCTTGATCTCTCATTTGTACCTTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VAFVLRVPAALFPGP*LWQRFLDLSFVPFS Trigger: AGAGAAAGGTACAAATGAGAGATCAAGAAATCGCTGCCACAGCCAAGGACCTGGAAATAAGGCAGCTGGAACTCGAAGCACAAAAGCGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR CAA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCGTGGCTGGCGATGGCTaGCGGTGCCATATCTTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: VSKNLYCERFQKPFTSQSVAGDG*RCHILP Trigger: CGGCAAGATATGGCACCGCAAGCCATCGCCAGCCAC...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR CAA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCTTGCCGCTCTCCTTGTaGCCCAGGTCAGTGCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VSKNLYCERFQKPFTSQSLPLSL*PRSVLC Trigger: GCAGAGCACTGACCTGGGCAACAAGGAGAGCGGCAA...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR CAA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCGCCCTGGCTGCGCTGTaGATCGGCACACTTCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VSKNLYCERFQKPFTSQSALAAL*IGTLLL Trigger: AAGCAGAAGTGTGCCGATCAACAGCGCAGCCAGGGC...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161329.2 |
||
| CDS-3UTR CAA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCTTGCGGTGCCATATCTaGCCGCTCTCCTTGTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VSKNLYCERFQKPFTSQSLRCHI*PLSLLP Trigger: GGGCAACAAGGAGAGCGGCAAGATATGGCACCGCAA...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS TCA 90 bp | ATTTTACAAATGGAAATGCCAAGAGTGGAAGGTATGGTGTGTCACTaGAGATTGCAGACCAGTGAGCTAATGCAGAGAGGGTTCTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: ILQMEMPRVEGMVCH*RLQTSELMQRGFSA Trigger: TGCAGAGAACCCTCTCTGCATTAGCTCACTGGTCTGCAATCTTCAGTGACACACCATACCTTCCACTCTTGGCATTTCCATTTGTAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS GCA 90 bp | CTCAGACTTTCTACGAAGATTAAAGGCCAGAGCTGTGCACGCTTGTaGTGTTCGCTGAACAAGATTAAACCTGTTTCCATGCAAGTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LRLSTKIKGQSCARL*CSLNKIKPVSMQVK Trigger: TTTGACTTGCATGGAAACAGGTTTAATCTTGTTCAGCGAACAGCACAAGCGTGCACAGCTCTGGCCTTTAATCTTCGTAGAAAGTCTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS GCA 90 bp | TTAGCTCTCTGCTCATCCACTTCAGCTTGCATATTTTCAACTGTCTaGCTCTCTCTCAAGAAGTCCAGTTCATCGTTCCTTATCCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LALCSSTSACIFSTV*LSLKKSSSSFLILS Trigger: GGAAAGGATAAGGAACGATGAACTGGACTTCTTGAGAGAGAGGCAGACAGTTGAAAATATGCAAGCTGAAGTGGATGAGCAGAGAGCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS CCA 90 bp | TTTGTGCTTCGAGTTCCAGCTGCCTTATTTCCAGGTCCTTGGCTGTaGCAGCGATTTCTTGATCTCTCATTTGTACCTTTCTCTCAATTT | + |
|
Preference number: 5 (lower is better) Translates to: FVLRVPAALFPGPWL*QRFLDLSFVPFSQF Trigger: AAATTGAGAGAAAGGTACAAATGAGAGATCAAGAAATCGCTGCCACAGCCAAGGACCTGGAAATAAGGCAGCTGGAACTCGAAGCACAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR CAA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCCAGAGCTGTGCACGCTaGTGCTGTTCGCTGAACAAG | + |
|
Preference number: 5 (lower is better) Translates to: VSKNLYCERFQKPFTSQSQSCAR*CCSLNK Trigger: CTTGTTCAGCGAACAGCACAAGCGTGCACAGCTCTG...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR CAA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCCCAGTCAGGTCCTGCTaGAGCACCCTGGTTGGAATT | + |
|
Preference number: 5 (lower is better) Translates to: VSKNLYCERFQKPFTSQSPVRSC*STLVGI Trigger: AATTCCAACCAGGGTGCTCAAGCAGGACCTGACTGG...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR CAA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCGGCATTCAGGCAGGCTaGCTCGGCCTTTGCCAAATT | + |
|
Preference number: 5 (lower is better) Translates to: VSKNLYCERFQKPFTSQSGIQAG*LGLCQI Trigger: AATTTGGCAAAGGCCGAGCAAGCCTGCCTGAATGCC...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161329.2 |
||
| CDS GCA 90 bp | GAACTTTGGATATTGATTAAATATAGGGTACTGCCCTTTCGTCAGTaGAACGAAAGCATCCAGCATGCTATTTGGGTGGATATCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ELWILIKYRVLPFRQ*NESIQHAIWVDISR Trigger: CCTGCTGATATCCACCCAAATAGCATGCTGGATGCTTTCGTTGCACTGACGAAAGGGCAGTACCCTATATTTAATCAATATCCAAAGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS CCA 90 bp | CCTTATCCTTTCCCATTCCCGTGTCTGGTAGTCCACAATGAACTTTaGATATTGATTAAATATAGGGTACTGCCCTTTCGTCAGTGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: PYPFPFPCLVVHNEL*ILIKYRVLPFRQCN Trigger: GTTGCACTGACGAAAGGGCAGTACCCTATATTTAATCAATATCCAAAGTTCATTGTGGACTACCAGACACGGGAATGGGAAAGGATAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR CAA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCAGGCTTGCTCGGCCTTaGCCAAATTGTCCTCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: VSKNLYCERFQKPFTSQSRLARP*PNCPPS Trigger: TGATGGAGGACAATTTGGCAAAGGCCGAGCAAGCCT...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161329.2 |
||
| CDS-3UTR CAA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCGAAGTATCTCTCTTCTaGTCTCCTCAGCTCTGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: VSKNLYCERFQKPFTSQSEVSLF*SPQLCG Trigger: TCCGCAGAGCTGAGGAGACAAGAAGAGAGATACTTC...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR CAA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCCATTTCCCGTTGATCTaGCTGAAGCTTCAGCAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: VSKNLYCERFQKPFTSQSHFPLI*LKLQQA Trigger: CGCTTGCTGAAGCTTCAGCAAGATCAACGGGAAATG...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR CAA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCCAGCTCCATTTCCCGTaGATCTTGCTGAAGCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: VSKNLYCERFQKPFTSQSQLHFP*ILLKLQ Trigger: CTGAAGCTTCAGCAAGATCAACGGGAAATGGAGCTG...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR CAA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCCTTATTTCCAGGTCCTaGGCTGTGGCAGCGATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VSKNLYCERFQKPFTSQSLISRS*AVAAIS Trigger: AGAAATCGCTGCCACAGCCAAGGACCTGGAAATAAG...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS CCA 90 bp | TGGAATTTTGCTCTCTTTACATCTTGCAGGCCGCTGTACTCTTCCTaGCATTATCTTCATTTTAAGATTGCTGGAACTCACTGTGTTACT | + |
|
Preference number: 5 (lower is better) Translates to: WNFALFTSCRPLYSS*HYLHFKIAGTHCVT Trigger: AGTAACACAGTGAGTTCCAGCAATCTTAAAATGAAGATAATGCCAGGAAGAGTACAGCGGCCTGCAAGATGTAAAGAGAGCAAAATTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR CAA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCCAGGCGAAGATGGAGTaGTCTTTAAAACAGCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VSKNLYCERFQKPFTSQSQAKME*SLKQLR Trigger: CCTCAGCTGTTTTAAAGACAACTCCATCTTCGCCTG...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR CAA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCCTCATAAAGTCGCTTTaGTGCTTCGAGTTCCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VSKNLYCERFQKPFTSQSLIKSL*CFEFQL Trigger: CAGCTGGAACTCGAAGCACAAAAGCGACTTTATGAG...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR CAA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCGTCCATGTACTGCCTTaGCAACCAAGGCATTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VSKNLYCERFQKPFTSQSVHVLP*QPRHFF Trigger: GAAGAAATGCCTTGGTTGCAAAGGCAGTACATGGAC...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022992.13 ENSMUST00000161329.2 |
||
| CDS-3UTR CAA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCCCTCCTCCTCCATCATaGCATTTAACACTTCGACCT | + |
|
Preference number: 5 (lower is better) Translates to: VSKNLYCERFQKPFTSQSPPPPS*HLTLRP Trigger: AGGTCGAAGTGTTAAATGCAATGATGGAGGAGGAGG...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161329.2 |
||
| CDS TCA 90 bp | ATTTTCCATAATGGATGCTATGTACCGACCGTGTGGACTAATTACTaGCGAGCTAATTCCTTCTTCAACAGTCCCAATTTCAAAGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: IFHNGCYVPTVWTNY*RANSFFNSPNFKEK Trigger: CTTCTCTTTGAAATTGGGACTGTTGAAGAAGGAATTAGCTCGTCAGTAATTAGTCCACACGGTCGGTACATAGCATCCATTATGGAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR CAA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCAGGTGGACCTGGCAATaGGTATTTGCAAAACAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: VSKNLYCERFQKPFTSQSRWTWQ*VFAKQS Trigger: ACTCTGTTTTGCAAATACCAATTGCCAGGTCCACCT...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR CAA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCGGGCAGAGGCTTTCTTaGCTGATTGCAAATGGAATT | + |
|
Preference number: 5 (lower is better) Translates to: VSKNLYCERFQKPFTSQSGQRLS*LIANGI Trigger: AATTCCATTTGCAATCAGCAAAGAAAGCCTCTGCCC...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022992.13 ENSMUST00000161329.2 |
||
| CDS-3UTR CAA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCACCCTGGTTGGAATTTaGCTCTCTTTACATCTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: VSKNLYCERFQKPFTSQSTLVGI*LSLHLA Trigger: TGCAAGATGTAAAGAGAGCAAAATTCCAACCAGGGT...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR CAA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCGACAATTCATTCTCCTaGTTTTCTAAGTCCCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: VSKNLYCERFQKPFTSQSDNSFS*FSKSPV Trigger: GACTGGGGACTTAGAAAACAAGGAGAATGAATTGTC...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR CAA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCCTCATCCACTTCAGCTaGCATATTTTCAACTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VSKNLYCERFQKPFTSQSLIHFS*HIFNCL Trigger: CAGACAGTTGAAAATATGCAAGCTGAAGTGGATGAG...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR CAA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCTGTGGCAGCGATTTCTaGATCTCTCATTTGTACCTT | + |
|
Preference number: 5 (lower is better) Translates to: VSKNLYCERFQKPFTSQSCGSDF*ISHLYL Trigger: AAGGTACAAATGAGAGATCAAGAAATCGCTGCCACA...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS TCA 90 bp | GAAGTTATATCACGATCTATGAAGTGCTGCAGCAGCTCCTTGTCATaGAATGCCAAAACATTTTCTATCATGCTAAGAATGTTGATAGGA | + |
|
Preference number: 5 (lower is better) Translates to: EVISRSMKCCSSSLS*NAKTFSIMLRMLIG Trigger: TCCTATCAACATTCTTAGCATGATAGAAAATGTTTTGGCATTTCATGACAAGGAGCTGCTGCAGCACTTCATAGATCGTGATATAACTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR CAA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCCATCTTCTCCTCTTCTaGAAGAAGTATCTCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VSKNLYCERFQKPFTSQSHLLLF*KKYLSS Trigger: AGAAGAGAGATACTTCTTCAAGAAGAGGAGAAGATG...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR CAA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCACATTCTGTATTTTGTaGGATATTCCCCATAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: VSKNLYCERFQKPFTSQSTFCIL*DIPHSL Trigger: AAGGCTATGGGGAATATCCAACAAAATACAGAATGT...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR CAA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCGTACTCAAACCAATGTaGACACCAATTGATTATGAG | + |
|
Preference number: 5 (lower is better) Translates to: VSKNLYCERFQKPFTSQSVLKPM*TPIDYE Trigger: CTCATAATCAATTGGTGTCAACATTGGTTTGAGTAC...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS-3UTR CAA 90 bp | GTTTCCAAAAATCTTTATTGTGAAAGATTCCAGAAGCCCTTTACAAGCCAAAGCATCATGCTAAGAATGTaGATAGGAGGATTAGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: VSKNLYCERFQKPFTSQSIMLRM*IGGLGK Trigger: CTTTCCTAATCCTCCTATCAACATTCTTAGCATGAT...GCTTTGGCTTGTAAAGGGCTTCTGGAATCTTTCACAATAAAGATTTTTGGAAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS GCA 72 bp | GTTCCCTGGAGCCGTCGTGAGTGGCTGGCGATGGCTTaGGGTGCCATATCTTGCCGCTCTCCTTGTTGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: VPWSRREWLAMA*GAISCRSPCCP Trigger: TGGGCAACAAGGAGAGCGGCAAGATATGGCACCGCAAGCCATCGCCAGCCACTCACGACGGCTCCAGGGAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159775.8 |
||
| CDS GCA 72 bp | CCTTCTCTTCGGCTTCCTTCCACCTCTGCGCCCTTCTaGCCCCCATCTGGCTGTTCTCTAGCAGCTTCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: PSLRLPSTSAPF*PPSGCSLAASG Trigger: TCCAGAAGCTGCTAGAGAACAGCCAGATGGGGGGCAGAAGGGCGCAGAGGTGGAAGGAAGCCGAAGAGAAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
||
| CDS CCA 72 bp | AGACAGTTCCCTGGAGCCGTCGTGAGTGGCTGGCGATaGCTTGCGGTGCCATATCTTGCCGCTCTCCTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: RQFPGAVVSGWR*LAVPYLAALLV Trigger: AACAAGGAGAGCGGCAAGATATGGCACCGCAAGCCATCGCCAGCCACTCACGACGGCTCCAGGGAACTGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159775.8 |
||
| CDS CAA 72 bp | TCTGCCAGTCGGCATTCAGGCAGGCTTGCTCGGCCTTaGCCAAATTGTCCTCCATCACCCTCTGCGCCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SASRHSGRLARP*PNCPPSPSAPF Trigger: GAAGGGCGCAGAGGGTGATGGAGGACAATTTGGCAAAGGCCGAGCAAGCCTGCCTGAATGCCGACTGGCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161329.2 |
||
| CDS TCA 72 bp | GGCGTTGGAAACATAGACAGTTCCCTGGAGCCGTCGTaGGTGGCTGGCGATGGCTTGCGGTGCCATATCTTG | + |
|
Preference number: 6 (lower is better) Translates to: GVGNIDSSLEPS*VAGDGLRCHIL Trigger: CAAGATATGGCACCGCAAGCCATCGCCAGCCACTCACGACGGCTCCAGGGAACTGTCTATGTTTCCAACGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159775.8 |
||
| CDS CCA 72 bp | AAACATAGACAGTTCCCTGGAGCCGTCGTGAGTGGCTaGCGATGGCTTGCGGTGCCATATCTTGCCGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: KHRQFPGAVVSG*RWLAVPYLAAL Trigger: GAGAGCGGCAAGATATGGCACCGCAAGCCATCGCCAGCCACTCACGACGGCTCCAGGGAACTGTCTATGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159775.8 |
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| CDS TCA 72 bp | GAAGAGGCGGAGCCACTCCTCTCTCGTCAGCACTTCTaGGAACAGTGTTTCCAGGAGAGGCCAGGCATACAC | + |
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Preference number: 6 (lower is better) Translates to: EEAEPLLSRQHF*EQCFQERPGIH Trigger: GTGTATGCCTGGCCTCTCCTGGAAACACTGTTCTCAGAAGTGCTGACGAGAGAGGAGTGGCTCCGCCTCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS GCA 72 bp | TTGCCAAATTGTCCTCCATCACCCTCTGCGCCCTTCTaGCCCCCATCTGGCTGTTCTCTAGCAGCTTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: LPNCPPSPSAPF*PPSGCSLAASG Trigger: TCCAGAAGCTGCTAGAGAACAGCCAGATGGGGGGCAGAAGGGCGCAGAGGGTGATGGAGGACAATTTGGCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161329.2 |
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| CDS CCA 72 bp | GCCCTGTGGCCTCCAAGCACCACAAATGCAGGTGATTaGATTTGCCTCCAGCAGCCAAGATTCGGCCATCTC | + |
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Preference number: 6 (lower is better) Translates to: ALWPPSTTNAGD*ICLQQPRFGHL Trigger: GAGATGGCCGAATCTTGGCTGCTGGAGGCAAATCCAATCACCTGCATTTGTGGTGCTTGGAGGCCACAGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS CCA 72 bp | CTTCGACCTCTTTGCGTCTGTTCTCACGGAGGAGAGTaGCGACGTCATAGTAGCCCTGGCTGCGCTGTTGAT | + |
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Preference number: 6 (lower is better) Translates to: LRPLCVCSHGGE*RRHSSPGCAVD Trigger: ATCAACAGCGCAGCCAGGGCTACTATGACGTCGCCACTCTCCTCCGTGAGAACAGACGCAAAGAGGTCGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161329.2 |
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| CDS TCA 72 bp | AAGAGCCCTGTGGCCTCCAAGCACCACAAATGCAGGTaGTTGGATTTGCCTCCAGCAGCCAAGATTCGGCCA | + |
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Preference number: 6 (lower is better) Translates to: KSPVASKHHKCR*LDLPPAAKIRP Trigger: TGGCCGAATCTTGGCTGCTGGAGGCAAATCCAATCACCTGCATTTGTGGTGCTTGGAGGCCACAGGGCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS TCA 72 bp | TCCAGATGGCGAACAGCTCGTACCTTCGCAGGCATCTaGATGATTCTGAAGAGCCCTGTGGCCTCCAAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: SRWRTARTFAGI*MILKSPVASKH Trigger: GTGCTTGGAGGCCACAGGGCTCTTCAGAATCATTCAGATGCCTGCGAAGGTACGAGCTGTTCGCCATCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS GCA 72 bp | TGTGTCAGAGGAAGTGGTGATGGCGTATCTCCCAGATaGGTGCACAGAAATGGAACACACCGACGACTCGTG | + |
|
Preference number: 6 (lower is better) Translates to: CVRGSGDGVSPR*VHRNGTHRRLV Trigger: CACGAGTCGTCGGTGTGTTCCATTTCTGTGCACGCATCTGGGAGATACGCCATCACCACTTCCTCTGACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS CCA 72 bp | AGGCCACCACAGTCATCAGGAGGAAGGAAGGGTGATTaGAGAAGATGTTATCGAAGAGGCGGAGCCACTCCT | + |
|
Preference number: 6 (lower is better) Translates to: RPPQSSGGRKGD*RRCYRRGGATP Trigger: AGGAGTGGCTCCGCCTCTTCGATAACATCTTCTCCAATCACCCTTCCTTCCTCCTGATGACTGTGGTGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS CAA 90 bp | TCTGCTGGGCCATCTTCTCCTCTTCTTGAAGAAGTATCTCTCTTCTaGTCTCCTCAGCTCTGCGGAGCAGCTCCTGCTTCTGGTACCACG | + |
|
Preference number: 6 (lower is better) Translates to: SAGPSSPLLEEVSLF*SPQLCGAAPASGTT Trigger: CGTGGTACCAGAAGCAGGAGCTGCTCCGCAGAGCTGAGGAGACAAGAAGAGAGATACTTCTTCAAGAAGAGGAGAAGATGGCCCAGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS CAA 90 bp | TCTAAGTCCCCAGTCAGGTCCTGCTTGAGCACCCTGGTTGGAATTTaGCTCTCTTTACATCTTGCAGGCCGCTGTACTCTTCCTGGCATT | + |
|
Preference number: 6 (lower is better) Translates to: SKSPVRSCLSTLVGI*LSLHLAGRCTLPGI Trigger: AATGCCAGGAAGAGTACAGCGGCCTGCAAGATGTAAAGAGAGCAAAATTCCAACCAGGGTGCTCAAGCAGGACCTGACTGGGGACTTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS GCA 72 bp | ACTGCCCTTTCGTCAGTGCAACGAAAGCATCCAGCATaGTATTTGGGTGGATATCAGCAGGCGTTGTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: TALSSVQRKHPA*YLGGYQQALSP Trigger: TGGAGACAACGCCTGCTGATATCCACCCAAATAGCATGCTGGATGCTTTCGTTGCACTGACGAAAGGGCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS GCA 72 bp | CCTCCTCCATCATTGCATTTAACACTTCGACCTCTTTaGGTCTGTTCTCACGGAGGAGAGTGGCGACGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: PPPSLHLTLRPL*VCSHGGEWRRH Trigger: ATGACGTCGCCACTCTCCTCCGTGAGAACAGACGCAAAGAGGTCGAAGTGTTAAATGCAATGATGGAGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161329.2 |
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| CDS CCA 72 bp | AATGTTCACTATAATTCCGTCGTGAGTGGCTGGCGATaGCTTGCGGTGCCATATCTTGCCGCTCTCCTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: NVHYNSVVSGWR*LAVPYLAALLV Trigger: AACAAGGAGAGCGGCAAGATATGGCACCGCAAGCCATCGCCAGCCACTCACGACGGAATTATAGTGAACATT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS CAA 72 bp | CCAGTCAGGTCCTGCTTGAGCACCCTGGTTGGAATTTaGCTCTCTTTACATCTTGCAGGCCGCTGTACTCTT | + |
|
Preference number: 6 (lower is better) Translates to: PVRSCLSTLVGI*LSLHLAGRCTL Trigger: AAGAGTACAGCGGCCTGCAAGATGTAAAGAGAGCAAAATTCCAACCAGGGTGCTCAAGCAGGACCTGACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS TCA 72 bp | TTTCTCTTCCTCTGGAAAGTATCCAAGTCCCAGAGCTaGGCTGTGTCAGAGGAAGTGGTGATGGCGTATCTC | + |
|
Preference number: 6 (lower is better) Translates to: FLFLWKVSKSQS*AVSEEVVMAYL Trigger: GAGATACGCCATCACCACTTCCTCTGACACAGCTCAGCTCTGGGACTTGGATACTTTCCAGAGGAAGAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS CAA 72 bp | CCATCTTCTCCTCTTCTTGAAGAAGTATCTCTCTTCTaGTCTCCTCAGCTCTGCGGAGCAGCTCCTGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: PSSPLLEEVSLF*SPQLCGAAPAS Trigger: AGAAGCAGGAGCTGCTCCGCAGAGCTGAGGAGACAAGAAGAGAGATACTTCTTCAAGAAGAGGAGAAGATGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS CAA 90 bp | CTGGTACCACGCCTCATCCTTAGCTCTCTGCTCATCCACTTCAGCTaGCATATTTTCAACTGTCTGCCTCTCTCTCAAGAAGTCCAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LVPRLILSSLLIHFS*HIFNCLPLSQEVQF Trigger: GAACTGGACTTCTTGAGAGAGAGGCAGACAGTTGAAAATATGCAAGCTGAAGTGGATGAGCAGAGAGCTAAGGATGAGGCGTGGTACCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS TCA 72 bp | GGAAGGTATGGTGTGTCACTGAAGATTGCAGACCAGTaGGCTAATGCAGAGAGGGTTCTCTGCAATACTCTC | + |
|
Preference number: 6 (lower is better) Translates to: GRYGVSLKIADQ*ANAERVLCNTL Trigger: GAGAGTATTGCAGAGAACCCTCTCTGCATTAGCTCACTGGTCTGCAATCTTCAGTGACACACCATACCTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS TCA 72 bp | ATGGAAATGCCAAGAGTGGAAGGTATGGTGTGTCACTaGAGATTGCAGACCAGTGAGCTAATGCAGAGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: MEMPRVEGMVCH*RLQTSELMQRG Trigger: CCCTCTCTGCATTAGCTCACTGGTCTGCAATCTTCAGTGACACACCATACCTTCCACTCTTGGCATTTCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS GCA 72 bp | TCCTGCTTCTGGTACCACGCCTCATCCTTAGCTCTCTaGTCATCCACTTCAGCTTGCATATTTTCAACTGTC | + |
|
Preference number: 6 (lower is better) Translates to: SCFWYHASSLAL*SSTSACIFSTV Trigger: GACAGTTGAAAATATGCAAGCTGAAGTGGATGAGCAGAGAGCTAAGGATGAGGCGTGGTACCAGAAGCAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS CCA 72 bp | CGAGTTCCAGCTGCCTTATTTCCAGGTCCTTGGCTGTaGCAGCGATTTCTTGATCTCTCATTTGTACCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: RVPAALFPGPWL*QRFLDLSFVPF Trigger: GAAAGGTACAAATGAGAGATCAAGAAATCGCTGCCACAGCCAAGGACCTGGAAATAAGGCAGCTGGAACTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS CCA 72 bp | TGGAACATGTGTTCTTCCAGAGCCGCTTTCCGCCTATaGGCATCTGTATCTTCTCGGATTTCTTTGGCAACA | + |
|
Preference number: 6 (lower is better) Translates to: WNMCSSRAAFRL*ASVSSRISLAT Trigger: TGTTGCCAAAGAAATCCGAGAAGATACAGATGCCCATAGGCGGAAAGCGGCTCTGGAAGAACACATGTTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022992.13 ENSMUST00000161329.2 |
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| CDS GCA 72 bp | GGCATTTCTTCATGCTCCAAAGCTGCACTTGTCTCCTaGCTTAAAAACCACTTTCGAGAGGCATCTGAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: GISSCSKAALVS*LKNHFREASER Trigger: CCTTTCAGATGCCTCTCGAAAGTGGTTTTTAAGGCAGGAGACAAGTGCAGCTTTGGAGCATGAAGAAATGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022992.13 ENSMUST00000161329.2 |
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| CDS CAA 72 bp | CGCCTCATCCTTAGCTCTCTGCTCATCCACTTCAGCTaGCATATTTTCAACTGTCTGCCTCTCTCTCAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: RLILSSLLIHFS*HIFNCLPLSQE Trigger: TTCTTGAGAGAGAGGCAGACAGTTGAAAATATGCAAGCTGAAGTGGATGAGCAGAGAGCTAAGGATGAGGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS CAA 90 bp | GAACTCAGACTTTCTACGAAGATTAAAGGCCAGAGCTGTGCACGCTaGTGCTGTTCGCTGAACAAGATTAAACCTGTTTCCATGCAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: ELRLSTKIKGQSCAR*CCSLNKIKPVSMQV Trigger: GACTTGCATGGAAACAGGTTTAATCTTGTTCAGCGAACAGCACAAGCGTGCACAGCTCTGGCCTTTAATCTTCGTAGAAAGTCTGAGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS CAA 90 bp | AACAGCCTCTTGACTTGTAGTAAGATCCTTCTCATAAAGTCGCTTTaGTGCTTCGAGTTCCAGCTGCCTTATTTCCAGGTCCTTGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: NSLLTCSKILLIKSL*CFEFQLPYFQVLGC Trigger: ACAGCCAAGGACCTGGAAATAAGGCAGCTGGAACTCGAAGCACAAAAGCGACTTTATGAGAAGGATCTTACTACAAGTCAAGAGGCTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS CAA 90 bp | TTAAAAACCACTTTCGAGAGGCATCTGAAAGGGCAGAGGCTTTCTTaGCTGATTGCAAATGGAATTCCTTCTCTTCGGCTTCCTTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: LKTTFERHLKGQRLS*LIANGIPSLRLPST Trigger: GGTGGAAGGAAGCCGAAGAGAAGGAATTCCATTTGCAATCAGCAAAGAAAGCCTCTGCCCTTTCAGATGCCTCTCGAAAGTGGTTTTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS GCA 72 bp | TCTACGAAGATTAAAGGCCAGAGCTGTGCACGCTTGTaGTGTTCGCTGAACAAGATTAAACCTGTTTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: STKIKGQSCARL*CSLNKIKPVSM Trigger: CATGGAAACAGGTTTAATCTTGTTCAGCGAACAGCACAAGCGTGCACAGCTCTGGCCTTTAATCTTCGTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS CAA 72 bp | CTTTCTACGAAGATTAAAGGCCAGAGCTGTGCACGCTaGTGCTGTTCGCTGAACAAGATTAAACCTGTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LSTKIKGQSCAR*CCSLNKIKPVS Trigger: GGAAACAGGTTTAATCTTGTTCAGCGAACAGCACAAGCGTGCACAGCTCTGGCCTTTAATCTTCGTAGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS CAA 72 bp | ACTTTCGAGAGGCATCTGAAAGGGCAGAGGCTTTCTTaGCTGATTGCAAATGGAATTCCTTCTCTTCGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: TFERHLKGQRLS*LIANGIPSLRL Trigger: AAGCCGAAGAGAAGGAATTCCATTTGCAATCAGCAAAGAAAGCCTCTGCCCTTTCAGATGCCTCTCGAAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022992.13 ENSMUST00000161329.2 |
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| CDS CAA 90 bp | CCTTTCCCATTCCCGTGTCTGGTAGTCCACAATGAACTTTGGATATaGATTAAATATAGGGTACTGCCCTTTCGTCAGTGCAACGAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: PFPFPCLVVHNELWI*IKYRVLPFRQCNES Trigger: GCTTTCGTTGCACTGACGAAAGGGCAGTACCCTATATTTAATCAATATCCAAAGTTCATTGTGGACTACCAGACACGGGAATGGGAAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS TCA 72 bp | TTAAAGGCCAGAGCTGTGCACGCTTGTGCTGTTCGCTaGACAAGATTAAACCTGTTTCCATGCAAGTCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: LKARAVHACAVR*TRLNLFPCKSK Trigger: TTTTGACTTGCATGGAAACAGGTTTAATCTTGTTCAGCGAACAGCACAAGCGTGCACAGCTCTGGCCTTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS GCA 72 bp | TGCTCATCCACTTCAGCTTGCATATTTTCAACTGTCTaGCTCTCTCTCAAGAAGTCCAGTTCATCGTTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: CSSTSACIFSTV*LSLKKSSSSFL Trigger: AAGGAACGATGAACTGGACTTCTTGAGAGAGAGGCAGACAGTTGAAAATATGCAAGCTGAAGTGGATGAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS CCA 72 bp | GCTCTCTTTACATCTTGCAGGCCGCTGTACTCTTCCTaGCATTATCTTCATTTTAAGATTGCTGGAACTCAC | + |
|
Preference number: 6 (lower is better) Translates to: ALFTSCRPLYSS*HYLHFKIAGTH Trigger: GTGAGTTCCAGCAATCTTAAAATGAAGATAATGCCAGGAAGAGTACAGCGGCCTGCAAGATGTAAAGAGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS CAA 90 bp | CCTATGGGCATCTGTATCTTCTCGGATTTCTTTGGCAACAGCCTCTaGACTTGTAGTAAGATCCTTCTCATAAAGTCGCTTTTGTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: PMGICIFSDFFGNSL*TCSKILLIKSLLCF Trigger: GAAGCACAAAAGCGACTTTATGAGAAGGATCTTACTACAAGTCAAGAGGCTGTTGCCAAAGAAATCCGAGAAGATACAGATGCCCATAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS CAA 90 bp | TTAAAAACCACTTTCGAGAGGCATCTGAAAGGGCAGAGGCTTTCTTaGCTGATTGCAAATGGAATTCCTTCTCTTCGGCTTCCTTCCATT | + |
|
Preference number: 6 (lower is better) Translates to: LKTTFERHLKGQRLS*LIANGIPSLRLPSI Trigger: AATGGAAGGAAGCCGAAGAGAAGGAATTCCATTTGCAATCAGCAAAGAAAGCCTCTGCCCTTTCAGATGCCTCTCGAAAGTGGTTTTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161329.2 |
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| CDS TCA 72 bp | AATGGATGCTATGTACCGACCGTGTGGACTAATTACTaGCGAGCTAATTCCTTCTTCAACAGTCCCAATTTC | + |
|
Preference number: 6 (lower is better) Translates to: NGCYVPTVWTNY*RANSFFNSPNF Trigger: GAAATTGGGACTGTTGAAGAAGGAATTAGCTCGTCAGTAATTAGTCCACACGGTCGGTACATAGCATCCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS GCA 72 bp | ACTTGTAGTAAGATCCTTCTCATAAAGTCGCTTTTGTaGTTCGAGTTCCAGCTGCCTTATTTCCAGGTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: TCSKILLIKSLL*FEFQLPYFQVL Trigger: AAGGACCTGGAAATAAGGCAGCTGGAACTCGAAGCACAAAAGCGACTTTATGAGAAGGATCTTACTACAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS CAA 72 bp | CCTTATTTCCAGGTCCTTGGCTGTGGCAGCGATTTCTaGATCTCTCATTTGTACCTTTCTCTCAATTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: PYFQVLGCGSDF*ISHLYLSLNFI Trigger: GATGAAATTGAGAGAAAGGTACAAATGAGAGATCAAGAAATCGCTGCCACAGCCAAGGACCTGGAAATAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS CAA 72 bp | TTGACTTGTAGTAAGATCCTTCTCATAAAGTCGCTTTaGTGCTTCGAGTTCCAGCTGCCTTATTTCCAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LTCSKILLIKSL*CFEFQLPYFQV Trigger: GACCTGGAAATAAGGCAGCTGGAACTCGAAGCACAAAAGCGACTTTATGAGAAGGATCTTACTACAAGTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS CCA 72 bp | TTCCCATTCCCGTGTCTGGTAGTCCACAATGAACTTTaGATATTGATTAAATATAGGGTACTGCCCTTTCGT | + |
|
Preference number: 6 (lower is better) Translates to: FPFPCLVVHNEL*ILIKYRVLPFR Trigger: ACGAAAGGGCAGTACCCTATATTTAATCAATATCCAAAGTTCATTGTGGACTACCAGACACGGGAATGGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS CAA 90 bp | TGGTATTTGCAAAACAGAGTATCACATTCCCAGGCGAAGATGGAGTaGTCTTTAAAACAGCTGAGGATGGTGTTACTTAATGGTAGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: WYLQNRVSHSQAKME*SLKQLRMVLLNGRK Trigger: CTTTCTACCATTAAGTAACACCATCCTCAGCTGTTTTAAAGACAACTCCATCTTCGCCTGGGAATGTGATACTCTGTTTTGCAAATACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS TCA 72 bp | TCACGATCTATGAAGTGCTGCAGCAGCTCCTTGTCATaGAATGCCAAAACATTTTCTATCATGCTAAGAATG | + |
|
Preference number: 6 (lower is better) Translates to: SRSMKCCSSSLS*NAKTFSIMLRM Trigger: CATTCTTAGCATGATAGAAAATGTTTTGGCATTTCATGACAAGGAGCTGCTGCAGCACTTCATAGATCGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS CAA 72 bp | CAAAACAGAGTATCACATTCCCAGGCGAAGATGGAGTaGTCTTTAAAACAGCTGAGGATGGTGTTACTTAAT | + |
|
Preference number: 6 (lower is better) Translates to: QNRVSHSQAKME*SLKQLRMVLLN Trigger: ATTAAGTAACACCATCCTCAGCTGTTTTAAAGACAACTCCATCTTCGCCTGGGAATGTGATACTCTGTTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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| CDS TCA 72 bp | TTGATAGGAGGATTAGGAAAGTACTCAAACCAATGTTaGCACCAATTGATTATGAGAGTAGCCACAACTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LIGGLGKYSNQC*HQLIMRVATTS Trigger: TGAAGTTGTGGCTACTCTCATAATCAATTGGTGTCAACATTGGTTTGAGTACTTTCCTAATCCTCCTATCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022992.13 |
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