RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TBC1D30 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000052302

Ensembl transcript IDs: ENSMUST00000064107.7, ENSMUST00000218111.2, ENSMUST00000219179.2

Found 278 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGAGTGCTGCCGCCTCCATCACCATCACCGCTGCTGCCTTCACTGTaGGCTGTTACTGTACGACCGGAGGGAAACTCCTCGGCTGCCCCC +
Preference number: 1 (lower is better)
Translates to: GVLPPPSPSPLLPSL*AVTVRPEGNSSAAP
Trigger: GGGGGCAGCCGAGGAGTTTCCCTCCGGTCGTACAGTAACAGCTCACAGTGAAGGCAGCAGCGGTGATGGTGATGGAGGCGGCAGCACTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR GCA 90 bp CCCCAAACACTGGCTCCGGAGACTGCCCTTCGATCGTCCTCGGAGTaGTGCCGCCTCCATCACCATCACCGCTGCTGCCTTCACTGTGAG +
Preference number: 1 (lower is better)
Translates to: PQTLAPETALRSSSE*CRLHHHHRCCLHCE
Trigger: CTCACAGTGAAGGCAGCAGCGGTGATGGTGATGGAGGCGGCAGCACTCCGAGGACGATCGAAGGGCAGTCTCCGGAGCCAGTGTTTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR GCA 90 bp GCAGCCACGTCGACGTCAGCATCCCCAAACACTGGCTCCGGAGACTaGCCTTCGATCGTCCTCGGAGTGCTGCCGCCTCCATCACCATCA +
Preference number: 1 (lower is better)
Translates to: AATSTSASPNTGSGD*PSIVLGVLPPPSPS
Trigger: TGATGGTGATGGAGGCGGCAGCACTCCGAGGACGATCGAAGGGCAGTCTCCGGAGCCAGTGTTTGGGGATGCTGACGTCGACGTGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR GCA 90 bp CAAACACTGGCTCCGGAGACTGCCCTTCGATCGTCCTCGGAGTGCTaGCGCCTCCATCACCATCACCGCTGCTGCCTTCACTGTGAGCTG +
Preference number: 1 (lower is better)
Translates to: QTLAPETALRSSSEC*RLHHHHRCCLHCEL
Trigger: CAGCTCACAGTGAAGGCAGCAGCGGTGATGGTGATGGAGGCGGCAGCACTCCGAGGACGATCGAAGGGCAGTCTCCGGAGCCAGTGTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR GCA 90 bp CCAGGGGCATCGGCTAACTCTGAAGCGTGCCGCTGGCAGGGGAAGTaGACCTTGGGTTCCGTTTCTGCCGCGGCATCCCTTTGGTTCAGT +
Preference number: 1 (lower is better)
Translates to: PGASANSEACRWQGK*TLGSVSAAASLWFS
Trigger: ACTGAACCAAAGGGATGCCGCGGCAGAAACGGAACCCAAGGTGCACTTCCCCTGCCAGCGGCACGCTTCAGAGTTAGCCGATGCCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR CCA 90 bp TTTCACCTGAACTGCAGCCACGTCGACGTCAGCATCCCCAAACACTaGCTCCGGAGACTGCCCTTCGATCGTCCTCGGAGTGCTGCCGCC +
Preference number: 1 (lower is better)
Translates to: FHLNCSHVDVSIPKH*LRRLPFDRPRSAAA
Trigger: GGCGGCAGCACTCCGAGGACGATCGAAGGGCAGTCTCCGGAGCCAGTGTTTGGGGATGCTGACGTCGACGTGGCTGCAGTTCAGGTGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR CCA 90 bp CATCGGCTAACTCTGAAGCGTGCCGCTGGCAGGGGAAGTGCACCTTaGGTTCCGTTTCTGCCGCGGCATCCCTTTGGTTCAGTTCCAAGG +
Preference number: 1 (lower is better)
Translates to: HRLTLKRAAGRGSAP*VPFLPRHPFGSVPR
Trigger: CCTTGGAACTGAACCAAAGGGATGCCGCGGCAGAAACGGAACCCAAGGTGCACTTCCCCTGCCAGCGGCACGCTTCAGAGTTAGCCGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR TCA 90 bp CCAACTGCGGGAACGGGAAAGGGGCCATCGAATACACGGTCTGCATaGGTTCATGGCTCTGTAGCAGATCCTGCTCCAGCATCTCCTGGG +
Preference number: 1 (lower is better)
Translates to: PTAGTGKGPSNTRSA*VHGSVADPAPASPG
Trigger: CCCAGGAGATGCTGGAGCAGGATCTGCTACAGAGCCATGAACTCATGCAGACCGTGTATTCGATGGCCCCTTTCCCGTTCCCGCAGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR GCA 90 bp CTCAGTCGCTTCTTTAATCTGCTTTTGGTACTTCTGCAGTTCAGGTaGCAGGAGCCCACTGAGCGGTCCAAGGCACCCCACGGCACTCGC +
Preference number: 1 (lower is better)
Translates to: LSRFFNLLLVLLQFR*QEPTERSKAPHGTR
Trigger: GCGAGTGCCGTGGGGTGCCTTGGACCGCTCAGTGGGCTCCTGGCACCTGAACTGCAGAAGTACCAAAAGCAGATTAAAGAAGCGACTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR GCA 90 bp CTGTTACTGTACGACCGGAGGGAAACTCCTCGGCTGCCCCCAAGCTaGTGGCCTTACAGCCTTCACTCTGTTCTTCTATCAGCCCTACCG +
Preference number: 1 (lower is better)
Translates to: LLLYDRRETPRLPPS*WPYSLHSVLLSALP
Trigger: CGGTAGGGCTGATAGAAGAACAGAGTGAAGGCTGTAAGGCCAGCAGCTTGGGGGCAGCCGAGGAGTTTCCCTCCGGTCGTACAGTAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR TCA 90 bp GCCGCGGCATCCCTTTGGTTCAGTTCCAAGGCTTCTAATTTCACCTaGACTGCAGCCACGTCGACGTCAGCATCCCCAAACACTGGCTCC +
Preference number: 1 (lower is better)
Translates to: AAASLWFSSKASNFT*TAATSTSASPNTGS
Trigger: GGAGCCAGTGTTTGGGGATGCTGACGTCGACGTGGCTGCAGTTCAGGTGAAATTAGAAGCCTTGGAACTGAACCAAAGGGATGCCGCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR GCA 90 bp TCTGCCAACTGCGGGAACGGGAAAGGGGCCATCGAATACACGGTCTaGATGAGTTCATGGCTCTGTAGCAGATCCTGCTCCAGCATCTCC +
Preference number: 1 (lower is better)
Translates to: SANCGNGKGAIEYTV*MSSWLCSRSCSSIS
Trigger: GGAGATGCTGGAGCAGGATCTGCTACAGAGCCATGAACTCATGCAGACCGTGTATTCGATGGCCCCTTTCCCGTTCCCGCAGTTGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR CCA 90 bp GTACACCATATACGTATGATCTCTCCCTCCCTGCGTTCCTCCCTCTaGCCGCTTCTATTCAGGAGCCTGCTCTTCTGTCCCCTTCTGGGC +
Preference number: 1 (lower is better)
Translates to: VHHIRMISPSLRSSL*PLLFRSLLFCPLLG
Trigger: GCCCAGAAGGGGACAGAAGAGCAGGCTCCTGAATAGAAGCGGCCAGAGGGAGGAACGCAGGGAGGGAGAGATCATACGTATATGGTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR CCA 90 bp TTACTGTACGACCGGAGGGAAACTCCTCGGCTGCCCCCAAGCTGCTaGCCTTACAGCCTTCACTCTGTTCTTCTATCAGCCCTACCGTGT +
Preference number: 1 (lower is better)
Translates to: LLYDRRETPRLPPSC*PYSLHSVLLSALPC
Trigger: ACACGGTAGGGCTGATAGAAGAACAGAGTGAAGGCTGTAAGGCCAGCAGCTTGGGGGCAGCCGAGGAGTTTCCCTCCGGTCGTACAGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR TCA 90 bp GGCGTCATCGCTTCTTGGTGCTGCTGTTCCCAATGCCGGACTTGTTaGAGCCCCTGCTCATCTGAGGGAAGTGCACGTTTGGGGTTCTTT +
Preference number: 1 (lower is better)
Translates to: GVIASWCCCSQCRTC*SPCSSEGSARLGFF
Trigger: AAAGAACCCCAAACGTGCACTTCCCTCAGATGAGCAGGGGCTTCAACAAGTCCGGCATTGGGAACAGCAGCACCAAGAAGCGATGACGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR GCA 90 bp ATTCAGGAGCCTGCTCTTCTGTCCCCTTCTGGGCAAATGAAAAGGTaGCCTGCACCCAGTGGTAAGAGCAGGAATGAACAGGGCCCTGAG +
Preference number: 1 (lower is better)
Translates to: IQEPALLSPSGQMKR*PAPSGKSRNEQGPE
Trigger: CTCAGGGCCCTGTTCATTCCTGCTCTTACCACTGGGTGCAGGGCACCTTTTCATTTGCCCAGAAGGGGACAGAAGAGCAGGCTCCTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR GCA 90 bp AGGGTCTGTTCCTCAGTCGCTTCTTTAATCTGCTTTTGGTACTTCTaGAGTTCAGGTGCCAGGAGCCCACTGAGCGGTCCAAGGCACCCC +
Preference number: 1 (lower is better)
Translates to: RVCSSVASLICFWYF*SSGARSPLSGPRHP
Trigger: GGGGTGCCTTGGACCGCTCAGTGGGCTCCTGGCACCTGAACTGCAGAAGTACCAAAAGCAGATTAAAGAAGCGACTGAGGAACAGACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR CCA 90 bp CCCCAGAAGAAGGTGGTTGATCACGGGAGAACTATTTGCCTGCGATaGGAGGATGCTGGTCACCGGCCCTTTGTCTGCCCTTATGTACAC +
Preference number: 1 (lower is better)
Translates to: PQKKVVDHGRTICLR*EDAGHRPFVCPYVH
Trigger: GTGTACATAAGGGCAGACAAAGGGCCGGTGACCAGCATCCTCCCATCGCAGGCAAATAGTTCTCCCGTGATCAACCACCTTCTTCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR GCA 90 bp CATCTTTTTCCCCAGAAGAAGGTGGTTGATCACGGGAGAACTATTTaGCTGCGATGGGAGGATGCTGGTCACCGGCCCTTTGTCTGCCCT +
Preference number: 1 (lower is better)
Translates to: HLFPQKKVVDHGRTI*LRWEDAGHRPFVCP
Trigger: AGGGCAGACAAAGGGCCGGTGACCAGCATCCTCCCATCGCAGGCAAATAGTTCTCCCGTGATCAACCACCTTCTTCTGGGGAAAAAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR GCA 90 bp TTCACTGTGAGCTGTTACTGTACGACCGGAGGGAAACTCCTCGGCTaGCCCCAAGCTGCTGGCCTTACAGCCTTCACTCTGTTCTTCTAT +
Preference number: 1 (lower is better)
Translates to: FTVSCYCTTGGKLLG*PQAAGLTAFTLFFY
Trigger: ATAGAAGAACAGAGTGAAGGCTGTAAGGCCAGCAGCTTGGGGGCAGCCGAGGAGTTTCCCTCCGGTCGTACAGTAACAGCTCACAGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR CCA 90 bp GTTGAACGCTGCATGGTACTCACTCCGACAGGAATTGATGGCTCCTaGGCTCAGCTCTGCGATGTTGTTCGATCTGAGGGTCTGTTCCTC +
Preference number: 1 (lower is better)
Translates to: VERCMVLTPTGIDGS*AQLCDVVRSEGLFL
Trigger: GAGGAACAGACCCTCAGATCGAACAACATCGCAGAGCTGAGCCCAGGAGCCATCAATTCCTGTCGGAGTGAGTACCATGCAGCGTTCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR GCA 90 bp TTTTTCCCCAGAAGAAGGTGGTTGATCACGGGAGAACTATTTGCCTaGGATGGGAGGATGCTGGTCACCGGCCCTTTGTCTGCCCTTATG +
Preference number: 1 (lower is better)
Translates to: FFPRRRWLITGELFA*DGRMLVTGPLSALM
Trigger: CATAAGGGCAGACAAAGGGCCGGTGACCAGCATCCTCCCATCGCAGGCAAATAGTTCTCCCGTGATCAACCACCTTCTTCTGGGGAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR GCA 90 bp CAAGTAACAGTCACTGTGCGGTGTTCTGGTTTGGAGCTGTGCATCTaGAGTGGAGAGAGAGCTGGTAGCGATCAGAACCATGTTCAGAGG +
Preference number: 1 (lower is better)
Translates to: QVTVTVRCSGLELCI*SGERAGSDQNHVQR
Trigger: CCTCTGAACATGGTTCTGATCGCTACCAGCTCTCTCTCCACTGCAGATGCACAGCTCCAAACCAGAACACCGCACAGTGACTGTTACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR GCA 90 bp GTTCCCAACTGCATAGTAGAGACAAGAGATGCTCTCCCTCTGATCTaGTGGGACCAGGGTAGGAGTGGAAAGACAGAAAGAACATGGGGG +
Preference number: 1 (lower is better)
Translates to: VPNCIVETRDALPLI*WDQGRSGKTERTWG
Trigger: CCCCCATGTTCTTTCTGTCTTTCCACTCCTACCCTGGTCCCAGCAGATCAGAGGGAGAGCATCTCTTGTCTCTACTATGCAGTTGGGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR GCA 90 bp GGCTGGAAACGGTGTGATGTTATAGGTATACTTTTCCCTCAACTCTaGCAACTGCGGGAACGGGAAAGGGGCCATCGAATACACGGTCTG +
Preference number: 1 (lower is better)
Translates to: GWKRCDVIGILFPQL*QLRERERGHRIHGL
Trigger: CAGACCGTGTATTCGATGGCCCCTTTCCCGTTCCCGCAGTTGGCAGAGTTGAGGGAAAAGTATACCTATAACATCACACCGTTTCCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR GCA 90 bp CTCAGTTCATTCTTATTGGACAAAAGAAACAGGAAGGGCGTAGCCTaGCACGTGAGTCTAGCCACTGAGCCACTTCGAGGCGTCATCGCT +
Preference number: 1 (lower is better)
Translates to: LSSFLLDKRNRKGVA*HVSLATEPLRGVIA
Trigger: AGCGATGACGCCTCGAAGTGGCTCAGTGGCTAGACTCACGTGGCAGGCTACGCCCTTCCTGTTTCTTTTGTCCAATAAGAATGAACTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR CCA 90 bp CCCAACTGCATAGTAGAGACAAGAGATGCTCTCCCTCTGATCTGCTaGGACCAGGGTAGGAGTGGAAAGACAGAAAGAACATGGGGGAAA +
Preference number: 1 (lower is better)
Translates to: PNCIVETRDALPLIC*DQGRSGKTERTWGK
Trigger: TTTCCCCCATGTTCTTTCTGTCTTTCCACTCCTACCCTGGTCCCAGCAGATCAGAGGGAGAGCATCTCTTGTCTCTACTATGCAGTTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR TCA 90 bp ATCTGGTCCCCACCATGGAACTTCCAATTCCCGTTTGGATGGGGCTaGTGGTGCTCAGCTCTGAACCTCTCAGTTCATTCTTATTGGACA +
Preference number: 1 (lower is better)
Translates to: IWSPPWNFQFPFGWG*WCSALNLSVHSYWT
Trigger: TGTCCAATAAGAATGAACTGAGAGGTTCAGAGCTGAGCACCATCAGCCCCATCCAAACGGGAATTGGAAGTTCCATGGTGGGGACCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064107.7
ENSMUST00000218111.2
3UTR CCA 90 bp TCTCTCCCTCCAAACACTAAGACCCTCAAGAGCCAGGGATCTTGGTaGAGAGAGAACCATTTTCTCTTCAAGTCAGTCATGGGGTGTGTG +
Preference number: 1 (lower is better)
Translates to: SLPPNTKTLKSQGSW*RENHFLFKSVMGCV
Trigger: CACACACCCCATGACTGACTTGAAGAGAAAATGGTTCTCTCTCCACCAAGATCCCTGGCTCTTGAGGGTCTTAGTGTTTGGAGGGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR CCA 90 bp CCATCTCTCCCTCCAAACACTAAGACCCTCAAGAGCCAGGGATCTTaGTGGAGAGAGAACCATTTTCTCTTCAAGTCAGTCATGGGGTGT +
Preference number: 1 (lower is better)
Translates to: PSLPPNTKTLKSQGS*WRENHFLFKSVMGC
Trigger: ACACCCCATGACTGACTTGAAGAGAAAATGGTTCTCTCTCCACCAAGATCCCTGGCTCTTGAGGGTCTTAGTGTTTGGAGGGAGAGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR CCA 90 bp AATGTCTTCATAGGGGACGGGAGAGATTTTCCCTCCTGGGTGGCCTaGCACGTGGATCACTGCATTCTTGGCTGCTCTGTTTGTAATTTT +
Preference number: 1 (lower is better)
Translates to: NVFIGDGRDFPSWVA*HVDHCILGCSVCNF
Trigger: AAAATTACAAACAGAGCAGCCAAGAATGCAGTGATCCACGTGCCAGGCCACCCAGGAGGGAAAATCTCTCCCGTCCCCTATGAAGACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR TCA 90 bp GTTCTCATCGTCACTATCTCTGGCCTTACTGTGTCGCCCAGAAACTaGAGTGGGCTTAATCGTGGCTGGAAACGGTGTGATGTTATAGGT +
Preference number: 1 (lower is better)
Translates to: VLIVTISGLTVSPRN*SGLNRGWKRCDVIG
Trigger: ACCTATAACATCACACCGTTTCCAGCCACGATTAAGCCCACTTCAGTTTCTGGGCGACACAGTAAGGCCAGAGATAGTGACGATGAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR TCA 90 bp GGAACTTCCAATTCCCGTTTGGATGGGGCTGATGGTGCTCAGCTCTaGACCTCTCAGTTCATTCTTATTGGACAAAAGAAACAGGAAGGG +
Preference number: 1 (lower is better)
Translates to: GTSNSRLDGADGAQL*TSQFILIGQKKQEG
Trigger: CCCTTCCTGTTTCTTTTGTCCAATAAGAATGAACTGAGAGGTTCAGAGCTGAGCACCATCAGCCCCATCCAAACGGGAATTGGAAGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064107.7
ENSMUST00000218111.2
3UTR GCA 90 bp GGCAGACTCGGAAATAAACTGCAGTTATTAAGTTCTTCCGGTGTTTaGATACAGTGTCCGACACGTGGGGAAGATGGACAGTCACAACTG +
Preference number: 1 (lower is better)
Translates to: GRLGNKLQLLSSSGV*IQCPTRGEDGQSQL
Trigger: CAGTTGTGACTGTCCATCTTCCCCACGTGTCGGACACTGTATGCAAACACCGGAAGAACTTAATAACTGCAGTTTATTTCCGAGTCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR CCA 90 bp AGGGATCTTGGTGGAGAGAGAACCATTTTCTCTTCAAGTCAGTCATaGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAT +
Preference number: 1 (lower is better)
Translates to: RDLGGERTIFSSSQS*GVCVCVCVCVCVCD
Trigger: ATCACACACACACACACACACACACACACACACACACACACCCCATGACTGACTTGAAGAGAAAATGGTTCTCTCTCCACCAAGATCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR TCA 90 bp AGATTTGGTTTCAGAAATAGCAAAGCAACTCACTCAAACCAACATTaGCGGCTTCAACAGAGTTCCTGGGAGGAGCCAAAGGCTCTGGGA +
Preference number: 1 (lower is better)
Translates to: RFGFRNSKATHSNQH*RLQQSSWEEPKALG
Trigger: TCCCAGAGCCTTTGGCTCCTCCCAGGAACTCTGTTGAAGCCGTCAATGTTGGTTTGAGTGAGTTGCTTTGCTATTTCTGAAACCAAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR TCA 90 bp GCAATAGACCAGCTTGTCGTAGAAGAAACACTGGATTATTTACCGTaGGTTACTGAAGTGCCACTTAACCTGTGTGGCTCAGAGTTCCCA +
Preference number: 1 (lower is better)
Translates to: AIDQLVVEETLDYLP*VTEVPLNLCGSEFP
Trigger: TGGGAACTCTGAGCCACACAGGTTAAGTGGCACTTCAGTAACTCACGGTAAATAATCCAGTGTTTCTTCTACGACAAGCTGGTCTATTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR TCA 90 bp CTAGGAGGAAGGAACGCTAAGCTTCCTGCACATTCAGACAGGAAATaGCTCCGCCACCACAACAGTGAGAATCTTTATGCATATATCTCT +
Preference number: 1 (lower is better)
Translates to: LGGRNAKLPAHSDRK*LRHHNSENLYAYIS
Trigger: AGAGATATATGCATAAAGATTCTCACTGTTGTGGTGGCGGAGTCATTTCCTGTCTGAATGTGCAGGAAGCTTAGCGTTCCTTCCTCCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR GCA 90 bp ATGAGCCTCCAGAAAGGTGGCAATCAGCAAACCGTTCAGAGCAGTTaGTTAATGCATAGTCCACCTGTGTCTCTGCATATAGTCTTCAAT +
Preference number: 1 (lower is better)
Translates to: MSLQKGGNQQTVQSS*LMHSPPVSLHIVFN
Trigger: ATTGAAGACTATATGCAGAGACACAGGTGGACTATGCATTAAGCAACTGCTCTGAACGGTTTGCTGATTGCCACCTTTCTGGAGGCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR CCA 90 bp AACATTGACGGCTTCAACAGAGTTCCTGGGAGGAGCCAAAGGCTCTaGGAAACGAAGGTAAAGATATCACTGTATTCTGCTAATGATGGT +
Preference number: 1 (lower is better)
Translates to: NIDGFNRVPGRSQRL*ETKVKISLYSANDG
Trigger: ACCATCATTAGCAGAATACAGTGATATCTTTACCTTCGTTTCCCAGAGCCTTTGGCTCCTCCCAGGAACTCTGTTGAAGCCGTCAATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR TCA 90 bp TTGTTCTCTAAGTGGCAAGGCTCAGAAGTCCGTCAGTTCACATTGTaGTTACCTGGTACAGTGCATGCATGTTATCAGTACAGAGAGCTT +
Preference number: 1 (lower is better)
Translates to: LFSKWQGSEVRQFTL*LPGTVHACYQYREL
Trigger: AAGCTCTCTGTACTGATAACATGCATGCACTGTACCAGGTAATCACAATGTGAACTGACGGACTTCTGAGCCTTGCCACTTAGAGAACAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR TCA 90 bp ACTAGGTTTAGATCTAGATCTTTTTGGAGAGGACTGAGGTGCAGTTaGCTTCCAGAAAAAGTGCTGAAAGGGTACAGGCAGACTCGGAAA +
Preference number: 1 (lower is better)
Translates to: TRFRSRSFWRGLRCS*LPEKVLKGYRQTRK
Trigger: TTTCCGAGTCTGCCTGTACCCTTTCAGCACTTTTTCTGGAAGTCAACTGCACCTCAGTCCTCTCCAAAAAGATCTAGATCTAAACCTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR TCA 90 bp GCTTCCTGCACATTCAGACAGGAAATGACTCCGCCACCACAACAGTaGGAATCTTTATGCATATATCTCTGTGATCAGTACAGTTCTTCA +
Preference number: 1 (lower is better)
Translates to: ASCTFRQEMTPPPQQ*ESLCIYLCDQYSSS
Trigger: TGAAGAACTGTACTGATCACAGAGATATATGCATAAAGATTCTCACTGTTGTGGTGGCGGAGTCATTTCCTGTCTGAATGTGCAGGAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR GCA 90 bp CTCAGAAGTCCGTCAGTTCACATTGTGATTACCTGGTACAGTGCATaGATGTTATCAGTACAGAGAGCTTTAACAGGAATCTGTTGGGTT +
Preference number: 1 (lower is better)
Translates to: LRSPSVHIVITWYSA*MLSVQRALTGICWV
Trigger: AACCCAACAGATTCCTGTTAAAGCTCTCTGTACTGATAACATGCATGCACTGTACCAGGTAATCACAATGTGAACTGACGGACTTCTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR GCA 90 bp AAGGCTCAGAAGTCCGTCAGTTCACATTGTGATTACCTGGTACAGTaGATGCATGTTATCAGTACAGAGAGCTTTAACAGGAATCTGTTG +
Preference number: 1 (lower is better)
Translates to: KAQKSVSSHCDYLVQ*MHVISTESFNRNLL
Trigger: CAACAGATTCCTGTTAAAGCTCTCTGTACTGATAACATGCATGCACTGTACCAGGTAATCACAATGTGAACTGACGGACTTCTGAGCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR CCA 90 bp GTAGATAAAAGAAATTCTCTTCTTGTGCTTAACTTTGGGAAACAGTaGGTCTCATCATCTGGGGGTGGCATACAAAGTAAGCCCACGCAA +
Preference number: 1 (lower is better)
Translates to: VDKRNSLLVLNFGKQ*VSSSGGGIQSKPTQ
Trigger: TTGCGTGGGCTTACTTTGTATGCCACCCCCAGATGATGAGACCCACTGTTTCCCAAAGTTAAGCACAAGAAGAGAATTTCTTTTATCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR-3UTR TCA 90 bp GAACTGCAGCCACGTCGACGTCAGCATCCCCAAACACTGGCTCCGGAGACTGCCCCAGCATCTCCTGGGTaGGGCGCCCCATGGTGCCGT +
Preference number: 2 (lower is better)
Translates to: ELQPRRRQHPQTLAPETAPASPG*GAPWCR
Trigger: ACGGCACCATGGGGCGCCTCACCCAGGAGATGCTGG...GGCAGTCTCCGGAGCCAGTGTTTGGGGATGCTGACGTCGACGTGGCTGCAGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR-3UTR GCA 90 bp GAACTGCAGCCACGTCGACGTCAGCATCCCCAAACACTGGCTCCGGAGACTGCCCTTCTGCAGTTCAGGTaGCAGGAGCCCACTGAGCGG +
Preference number: 2 (lower is better)
Translates to: ELQPRRRQHPQTLAPETALLQFR*QEPTER
Trigger: CCGCTCAGTGGGCTCCTGGCACCTGAACTGCAGAAG...GGCAGTCTCCGGAGCCAGTGTTTGGGGATGCTGACGTCGACGTGGCTGCAGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR CAA 90 bp GCATCGGCTAACTCTGAAGCGTGCCGCTGGCAGGGGAAGTGCACCTaGGGTTCCGTTTCTGCCGCGGCATCCCTTTGGTTCAGTTCCAAG +
Preference number: 2 (lower is better)
Translates to: ASANSEACRWQGKCT*GSVSAAASLWFSSK
Trigger: CTTGGAACTGAACCAAAGGGATGCCGCGGCAGAAACGGAACCCAAGGTGCACTTCCCCTGCCAGCGGCACGCTTCAGAGTTAGCCGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR-3UTR GCA 90 bp CCAAGGCACCCCACGGCACTCGCAACAGCATCCTCATCATCCGGGCCGTTCTCACTCTGTAGCAGATCCTaGTCCAGCATCTCCTGGGTG +
Preference number: 2 (lower is better)
Translates to: PRHPTALATASSSSGPFSLCSRS*SSISWV
Trigger: CACCCAGGAGATGCTGGAGCAGGATCTGCTACAGAG...TGAGAACGGCCCGGATGATGAGGATGCTGTTGCGAGTGCCGTGGGGTGCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR-3UTR CCA 90 bp GAACTGCAGCCACGTCGACGTCAGCATCCCCAAACACTGGCTCCGGAGACTGCCATTTTCCCTCCTGGGTaGCCTGGCACGTGGATCACT +
Preference number: 2 (lower is better)
Translates to: ELQPRRRQHPQTLAPETAIFPPG*PGTWIT
Trigger: AGTGATCCACGTGCCAGGCCACCCAGGAGGGAAAAT...GGCAGTCTCCGGAGCCAGTGTTTGGGGATGCTGACGTCGACGTGGCTGCAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR-3UTR GCA 90 bp AGTGCACCTTGGGTTCCGTTTCTGCCGCGGCATCCCTTTGGTTCAGTTCCAAGGCTCAACTCTGCCAACTaGGGGAACGGGAAAGGGGCC +
Preference number: 2 (lower is better)
Translates to: SAPWVPFLPRHPFGSVPRLNSAN*GNGKGA
Trigger: GGCCCCTTTCCCGTTCCCGCAGTTGGCAGAGTTGAG...CCTTGGAACTGAACCAAAGGGATGCCGCGGCAGAAACGGAACCCAAGGTGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR-3UTR CCA 90 bp CTTTACCCAGCAGATGGGCAAAGGTCCCATCTGGTCCCCACCATGGAACTTCCATGCTCCAGCATCTCCTaGGTGAGGCGCCCCATGGTG +
Preference number: 2 (lower is better)
Translates to: LYPADGQRSHLVPTMELPCSSIS*VRRPMV
Trigger: CACCATGGGGCGCCTCACCCAGGAGATGCTGGAGCA...TGGAAGTTCCATGGTGGGGACCAGATGGGACCTTTGCCCATCTGCTGGGTAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR-3UTR TCA 90 bp TGGTTGATCACGGGAGAACTATTTGCCTGCGATGGGAGGATGCTGGTCACCGGCCCGTTTGGATGGGGCTaGTGGTGCTCAGCTCTGAAC +
Preference number: 2 (lower is better)
Translates to: WLITGELFACDGRMLVTGPFGWG*WCSALN
Trigger: GTTCAGAGCTGAGCACCATCAGCCCCATCCAAACGG...GCCGGTGACCAGCATCCTCCCATCGCAGGCAAATAGTTCTCCCGTGATCAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR-3UTR GCA 90 bp TCAGCATCCCCAAACACTGGCTCCGGAGACTGCCCTTCGATCGTCCTCGGAGTGGGAGAACTATTTGCCTaGGATGGGAGGATGCTGGTC +
Preference number: 2 (lower is better)
Translates to: SASPNTGSGDCPSIVLGVGELFA*DGRMLV
Trigger: GACCAGCATCCTCCCATCGCAGGCAAATAGTTCTCC...CACTCCGAGGACGATCGAAGGGCAGTCTCCGGAGCCAGTGTTTGGGGATGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR-3UTR CCA 90 bp GTGCTTCCCGGGAGAAGTTTGATGGCAGTCTGGTTTTCTCCAGGGGCATCGGCTAGCATCCCCAAACACTaGCTCCGGAGACTGCCCTTC +
Preference number: 2 (lower is better)
Translates to: VLPGRSLMAVWFSPGASASIPKH*LRRLPF
Trigger: GAAGGGCAGTCTCCGGAGCCAGTGTTTGGGGATGCT...AGCCGATGCCCCTGGAGAAAACCAGACTGCCATCAAACTTCTCCCGGGAAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR-3UTR CCA 90 bp GCTGCTGCCTTCACTGTGAGCTGTTACTGTACGACCGGAGGGAAACTCCTCGGCCATCGTCACTATCTCTaGCCTTACTGTGTCGCCCAG +
Preference number: 2 (lower is better)
Translates to: AAAFTVSCYCTTGGKLLGHRHYL*PYCVAQ
Trigger: CTGGGCGACACAGTAAGGCCAGAGATAGTGACGATG...GCCGAGGAGTTTCCCTCCGGTCGTACAGTAACAGCTCACAGTGAAGGCAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR-3UTR TCA 90 bp AATCCACTTTACCCAGCAGATGGGCAAAGGTCCCATCTGGTCCCCACCATGGAACCGTTTGGATGGGGCTaGTGGTGCTCAGCTCTGAAC +
Preference number: 2 (lower is better)
Translates to: NPLYPADGQRSHLVPTMEPFGWG*WCSALN
Trigger: GTTCAGAGCTGAGCACCATCAGCCCCATCCAAACGG...TTCCATGGTGGGGACCAGATGGGACCTTTGCCCATCTGCTGGGTAAAGTGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064107.7
ENSMUST00000218111.2
3UTR-3UTR GCA 90 bp CCTCCCTCTGGCCGCTTCTATTCAGGAGCCTGCTCTTCTGTCCCCTTCTGGGCAAGTTCTTCCGGTGTTTaGATACAGTGTCCGACACGT +
Preference number: 2 (lower is better)
Translates to: PPSGRFYSGACSSVPFWASSSGV*IQCPTR
Trigger: ACGTGTCGGACACTGTATGCAAACACCGGAAGAACT...TGCCCAGAAGGGGACAGAAGAGCAGGCTCCTGAATAGAAGCGGCCAGAGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR-3UTR CCA 90 bp CCTCCCTCTGGCCGCTTCTATTCAGGAGCCTGCTCTTCTGTCCCCTTCTGGGCAAGCCAGGGATCTTGGTaGAGAGAGAACCATTTTCTC +
Preference number: 2 (lower is better)
Translates to: PPSGRFYSGACSSVPFWASQGSW*RENHFL
Trigger: GAGAAAATGGTTCTCTCTCCACCAAGATCCCTGGCT...TGCCCAGAAGGGGACAGAAGAGCAGGCTCCTGAATAGAAGCGGCCAGAGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR-3UTR CCA 90 bp TCGGGAGTACTGCCGCTTCAGGGCGTTGATGTCCGTGGTCATCCGCTCCATCATGTCTGCATGAGTTCATaGCTCTGTAGCAGATCCTGC +
Preference number: 2 (lower is better)
Translates to: SGVLPLQGVDVRGHPLHHVCMSS*LCSRSC
Trigger: GCAGGATCTGCTACAGAGCCATGAACTCATGCAGAC...ATGATGGAGCGGATGACCACGGACATCAACGCCCTGAAGCGGCAGTACTCCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR-3UTR TCA 90 bp GAACTTCCAATTCCCGTTTGGATGGGGCTGATGGTGCTCAGCTCTGAACCTCTCGATCCAAAAAGGCCCTaGGAAGGCCAGAAGAGGGCT +
Preference number: 2 (lower is better)
Translates to: ELPIPVWMGLMVLSSEPLDPKRP*EGQKRA
Trigger: AGCCCTCTTCTGGCCTTCTCAGGGCCTTTTTGGATC...GAGAGGTTCAGAGCTGAGCACCATCAGCCCCATCCAAACGGGAATTGGAAGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR CAA 90 bp CGGCCCTTTGTCTGCCCTTATGTACACCTGATGGAGCTGCTGCTGTaGCTTCTTCTTAATTCGGGAGTACTGCCGCTTCAGGGCGTTGAT +
Preference number: 2 (lower is better)
Translates to: RPFVCPYVHLMELLL*LLLNSGVLPLQGVD
Trigger: ATCAACGCCCTGAAGCGGCAGTACTCCCGAATTAAGAAGAAGCAACAGCAGCAGCTCCATCAGGTGTACATAAGGGCAGACAAAGGGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR-3UTR TCA 90 bp ACACCATATACGTATGATCTCTCCCTCCCTGCGTTCCTCCCTCTGGCCGCTTCTGGACTGAGGTGCAGTTaGCTTCCAGAAAAAGTGCTG +
Preference number: 2 (lower is better)
Translates to: TPYTYDLSLPAFLPLAASGLRCS*LPEKVL
Trigger: CAGCACTTTTTCTGGAAGTCAACTGCACCTCAGTCC...AGAAGCGGCCAGAGGGAGGAACGCAGGGAGGGAGAGATCATACGTATATGGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR-3UTR GCA 90 bp GTGCTTCCCGGGAGAAGTTTGATGGCAGTCTGGTTTTCTCCAGGGGCATCGGCTTGGAGCTGCTGCTGTTaGTTCTTCTTAATTCGGGAG +
Preference number: 2 (lower is better)
Translates to: VLPGRSLMAVWFSPGASAWSCCC*FFLIRE
Trigger: CTCCCGAATTAAGAAGAAGCAACAGCAGCAGCTCCA...AGCCGATGCCCCTGGAGAAAACCAGACTGCCATCAAACTTCTCCCGGGAAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR-3UTR GCA 90 bp GAACTTCCAATTCCCGTTTGGATGGGGCTGATGGTGCTCAGCTCTGAACCTCTCCACGGGAGAACTATTTaGCTGCGATGGGAGGATGCT +
Preference number: 2 (lower is better)
Translates to: ELPIPVWMGLMVLSSEPLHGRTI*LRWEDA
Trigger: AGCATCCTCCCATCGCAGGCAAATAGTTCTCCCGTG...GAGAGGTTCAGAGCTGAGCACCATCAGCCCCATCCAAACGGGAATTGGAAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR CAA 90 bp TTCAGGGCGTTGATGTCCGTGGTCATCCGCTCCATCATCATACTGTaGAACGCTGCATGGTACTCACTCCGACAGGAATTGATGGCTCCT +
Preference number: 2 (lower is better)
Translates to: FRALMSVVIRSIIIL*NAAWYSLRQELMAP
Trigger: AGGAGCCATCAATTCCTGTCGGAGTGAGTACCATGCAGCGTTCAACAGTATGATGATGGAGCGGATGACCACGGACATCAACGCCCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR-3UTR TCA 90 bp ACACCATATACGTATGATCTCTCCCTCCCTGCGTTCCTCCCTCTGGCCGCTTCTTCACAACTCATTCTGTaGACACCATTCCGGGACTCT +
Preference number: 2 (lower is better)
Translates to: TPYTYDLSLPAFLPLAASSQLIL*TPFRDS
Trigger: AGAGTCCCGGAATGGTGTTCACAGAATGAGTTGTGA...AGAAGCGGCCAGAGGGAGGAACGCAGGGAGGGAGAGATCATACGTATATGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR-3UTR GCA 90 bp CTTTACCCAGCAGATGGGCAAAGGTCCCATCTGGTCCCCACCATGGAACTTCCACGTGAGTTACTGAAGTaGCACTTAACCTGTGTGGCT +
Preference number: 2 (lower is better)
Translates to: LYPADGQRSHLVPTMELPRELLK*HLTCVA
Trigger: AGCCACACAGGTTAAGTGGCACTTCAGTAACTCACG...TGGAAGTTCCATGGTGGGGACCAGATGGGACCTTTGCCCATCTGCTGGGTAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR CAA 90 bp ATCATCATACTGTTGAACGCTGCATGGTACTCACTCCGACAGGAATaGATGGCTCCTGGGCTCAGCTCTGCGATGTTGTTCGATCTGAGG +
Preference number: 2 (lower is better)
Translates to: IIILLNAAWYSLRQE*MAPGLSSAMLFDLR
Trigger: CCTCAGATCGAACAACATCGCAGAGCTGAGCCCAGGAGCCATCAATTCCTGTCGGAGTGAGTACCATGCAGCGTTCAACAGTATGATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR CAA 90 bp TGCTGTTGCTTCTTCTTAATTCGGGAGTACTGCCGCTTCAGGGCGTaGATGTCCGTGGTCATCCGCTCCATCATCATACTGTTGAACGCT +
Preference number: 2 (lower is better)
Translates to: CCCFFLIREYCRFRA*MSVVIRSIIILLNA
Trigger: AGCGTTCAACAGTATGATGATGGAGCGGATGACCACGGACATCAACGCCCTGAAGCGGCAGTACTCCCGAATTAAGAAGAAGCAACAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR-3UTR CCA 90 bp CCACTTTACCCAGCAGATGGGCAAAGGTCCCATCTGGTCCCCACCATGGAACTTAGGAGCCAAAGGCTCTaGGAAACGAAGGTAAAGATA +
Preference number: 2 (lower is better)
Translates to: PLYPADGQRSHLVPTMELRSQRL*ETKVKI
Trigger: TATCTTTACCTTCGTTTCCCAGAGCCTTTGGCTCCT...AAGTTCCATGGTGGGGACCAGATGGGACCTTTGCCCATCTGCTGGGTAAAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR CAA 90 bp TTGAGTATTAGTGACCTCCTGAGGACAGAAAGGTCAGGGAATGTGTaGTTTCAGGGATCCAAAAAGGCCCTGAGAAGGCCAGAAGAGGGC +
Preference number: 2 (lower is better)
Translates to: LSISDLLRTERSGNV*FQGSKKALRRPEEG
Trigger: GCCCTCTTCTGGCCTTCTCAGGGCCTTTTTGGATCCCTGAAACAACACATTCCCTGACCTTTCTGTCCTCAGGAGGTCACTAATACTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR-3UTR TCA 90 bp GTTCTTCCGGTGTTTGCATACAGTGTCCGACACGTGGGGAAGATGGACAGTCACCGTCAGTTCACATTGTaGTTACCTGGTACAGTGCAT +
Preference number: 2 (lower is better)
Translates to: VLPVFAYSVRHVGKMDSHRQFTL*LPGTVH
Trigger: ATGCACTGTACCAGGTAATCACAATGTGAACTGACG...GTGACTGTCCATCTTCCCCACGTGTCGGACACTGTATGCAAACACCGGAAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR-3UTR TCA 90 bp CTTTGTCTTAATGTCTTCATAGGGGACGGGAGAGATTTTCCCTCCTGGGTGGCCCCATCATCATACTGTTaGACGCTGCATGGTACTCAC +
Preference number: 2 (lower is better)
Translates to: LCLNVFIGDGRDFPSWVAPSSYC*TLHGTH
Trigger: GTGAGTACCATGCAGCGTTCAACAGTATGATGATGG...GGCCACCCAGGAGGGAAAATCTCTCCCGTCCCCTATGAAGACATTAAGACAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR-3UTR CCA 90 bp TTAATCTGCTTTTGGTACTTCTGCAGTTCAGGTGCCAGGAGCCCACTGAGCGGTATCTGGTCCCCACCATaGAACTTCCAATTCCCGTTT +
Preference number: 2 (lower is better)
Translates to: LICFWYFCSSGARSPLSGIWSPP*NFQFPF
Trigger: AAACGGGAATTGGAAGTTCCATGGTGGGGACCAGAT...ACCGCTCAGTGGGCTCCTGGCACCTGAACTGCAGAAGTACCAAAAGCAGATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR-3UTR CCA 90 bp GGCAAGGCTCAGAAGTCCGTCAGTTCACATTGTGATTACCTGGTACAGTGCATGACTTTACCCAGCAGATaGGCAAAGGTCCCATCTGGT +
Preference number: 2 (lower is better)
Translates to: GKAQKSVSSHCDYLVQCMTLPSR*AKVPSG
Trigger: ACCAGATGGGACCTTTGCCCATCTGCTGGGTAAAGT...CATGCACTGTACCAGGTAATCACAATGTGAACTGACGGACTTCTGAGCCTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR-3UTR GCA 90 bp GACGCACAAGATTTACTTAGTCACCAGAATCCACTTTACCCAGCAGATGGGCAATTGGAGCTGTGCATCTaGAGTGGAGAGAGAGCTGGT +
Preference number: 2 (lower is better)
Translates to: DAQDLLSHQNPLYPADGQLELCI*SGERAG
Trigger: ACCAGCTCTCTCTCCACTGCAGATGCACAGCTCCAA...TTGCCCATCTGCTGGGTAAAGTGGATTCTGGTGACTAAGTAAATCTTGTGCGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR-3UTR GCA 90 bp CCACTTTACCCAGCAGATGGGCAAAGGTCCCATCTGGTCCCCACCATGGAACTTGTCGCTTCTTTAATCTaGTTTTGGTACTTCTGCAGT +
Preference number: 2 (lower is better)
Translates to: PLYPADGQRSHLVPTMELVASLI*FWYFCS
Trigger: ACTGCAGAAGTACCAAAAGCAGATTAAAGAAGCGAC...AAGTTCCATGGTGGGGACCAGATGGGACCTTTGCCCATCTGCTGGGTAAAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR-3UTR CCA 90 bp GAACATGGGGGAAAGAGGGCCTTCTCCAGAGAAAGGCAGTGTTCAAGTAACAAAGAGCCTCCAGAAAGGTaGCAATCAGCAAACCGTTCA +
Preference number: 2 (lower is better)
Translates to: EHGGKRAFSRERQCSSNKEPPER*QSANRS
Trigger: TGAACGGTTTGCTGATTGCCACCTTTCTGGAGGCTC...TTTGTTACTTGAACACTGCCTTTCTCTGGAGAAGGCCCTCTTTCCCCCATGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR-3UTR CCA 90 bp AGTGCACCTTGGGTTCCGTTTCTGCCGCGGCATCCCTTTGGTTCAGTTCCAAGGTCTTTAATCTGCTTTTaGTACTTCTGCAGTTCAGGT +
Preference number: 2 (lower is better)
Translates to: SAPWVPFLPRHPFGSVPRSLICF*YFCSSG
Trigger: ACCTGAACTGCAGAAGTACCAAAAGCAGATTAAAGA...CCTTGGAACTGAACCAAAGGGATGCCGCGGCAGAAACGGAACCCAAGGTGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR-3UTR CCA 90 bp TCTGCTAATGATGGTGGAGACGGAGTGGAGAGCCCTTCATTTATCCAAAGGATAATGTTCAGAGGATGCTaGAGTTCCACACAGAGCCCA +
Preference number: 2 (lower is better)
Translates to: SANDGGDGVESPSFIQRIMFRGC*SSTQSP
Trigger: TGGGCTCTGTGTGGAACTCCAGCATCCTCTGAACAT...TATCCTTTGGATAAATGAAGGGCTCTCCACTCCGTCTCCACCATCATTAGCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR-3UTR TCA 90 bp GACGCACAAGATTTACTTAGTCACCAGAATCCACTTTACCCAGCAGATGGGCAAGATGGTGCTCAGCTCTaGACCTCTCAGTTCATTCTT +
Preference number: 2 (lower is better)
Translates to: DAQDLLSHQNPLYPADGQDGAQL*TSQFIL
Trigger: AAGAATGAACTGAGAGGTTCAGAGCTGAGCACCATC...TTGCCCATCTGCTGGGTAAAGTGGATTCTGGTGACTAAGTAAATCTTGTGCGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064107.7
ENSMUST00000218111.2
3UTR-3UTR TCA 90 bp GCGATGTTGTTCGATCTGAGGGTCTGTTCCTCAGTCGCTTCTTTAATCTGCTTTGATGGTGCTCAGCTCTaGACCTCTCAGTTCATTCTT +
Preference number: 2 (lower is better)
Translates to: AMLFDLRVCSSVASLICFDGAQL*TSQFIL
Trigger: AAGAATGAACTGAGAGGTTCAGAGCTGAGCACCATC...AAAGCAGATTAAAGAAGCGACTGAGGAACAGACCCTCAGATCGAACAACATCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR-3UTR TCA 90 bp TTCTTCTTAATTCGGGAGTACTGCCGCTTCAGGGCGTTGATGTCCGTGGTCATCTGGCTGGAAACGGTGTaGTGTTATAGGTATACTTTT +
Preference number: 2 (lower is better)
Translates to: FFLIREYCRFRALMSVVIWLETV*CYRYTF
Trigger: AAAAGTATACCTATAACATCACACCGTTTCCAGCCA...GATGACCACGGACATCAACGCCCTGAAGCGGCAGTACTCCCGAATTAAGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR-3UTR CCA 90 bp CCACTTTACCCAGCAGATGGGCAAAGGTCCCATCTGGTCCCCACCATGGAACTTTCAGTTCATTCTTATTaGACAAAAGAAACAGGAAGG +
Preference number: 2 (lower is better)
Translates to: PLYPADGQRSHLVPTMELSVHSY*TKETGR
Trigger: CCTTCCTGTTTCTTTTGTCCAATAAGAATGAACTGA...AAGTTCCATGGTGGGGACCAGATGGGACCTTTGCCCATCTGCTGGGTAAAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064107.7
ENSMUST00000218111.2
3UTR-3UTR CCA 90 bp GGGGACGAGATACTAAGAGAACAGTTGATAGACAACCCCACCCAATTATCCATCCCATCTTGCATCCTTTaGGGTAAAACTACCATGTGG +
Preference number: 2 (lower is better)
Translates to: GDEILREQLIDNPTQLSIPSCIL*GKTTMW
Trigger: CCACATGGTAGTTTTACCCCAAAGGATGCAAGATGG...GATGGATAATTGGGTGGGGTTGTCTATCAACTGTTCTCTTAGTATCTCGTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR-3UTR TCA 90 bp GGGGACGAGATACTAAGAGAACAGTTGATAGACAACCCCACCCAATTATCCATCGTGTGTGTGTGTGTGTaGTGCTTAATTGGAATGATC +
Preference number: 2 (lower is better)
Translates to: GDEILREQLIDNPTQLSIVCVCV*CLIGMI
Trigger: GATCATTCCAATTAAGCATCACACACACACACACAC...GATGGATAATTGGGTGGGGTTGTCTATCAACTGTTCTCTTAGTATCTCGTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR-3UTR GCA 90 bp CACACACACAAAAATATTCTTCCAGCTATTCGTTCAACCAATACTCGGCCCATAACCATGTTCAGAGGATaGTGGAGTTCCACACAGAGC +
Preference number: 2 (lower is better)
Translates to: HTHKNILPAIRSTNTRPITMFRG*WSSTQS
Trigger: GCTCTGTGTGGAACTCCAGCATCCTCTGAACATGGT...TATGGGCCGAGTATTGGTTGAACGAATAGCTGGAAGAATATTTTTGTGTGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR-3UTR CCA 90 bp CGGCTCTTTCTTAAGATATTGGGGGACGAGATACTAAGAGAACAGTTGATAGACATCTGGTCCCCACCATaGAACTTCCAATTCCCGTTT +
Preference number: 2 (lower is better)
Translates to: RLFLKILGDEILREQLIDIWSPP*NFQFPF
Trigger: AAACGGGAATTGGAAGTTCCATGGTGGGGACCAGAT...GTCTATCAACTGTTCTCTTAGTATCTCGTCCCCCAATATCTTAAGAAAGAGCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR-3UTR CCA 90 bp CGGCTCTTTCTTAAGATATTGGGGGACGAGATACTAAGAGAACAGTTGATAGACTTAGTTCTAGCAAGCTaGTGTTCGTTCATGCTTGAG +
Preference number: 2 (lower is better)
Translates to: RLFLKILGDEILREQLIDLVLAS*CSFMLE
Trigger: CTCAAGCATGAACGAACACCAGCTTGCTAGAACTAA...GTCTATCAACTGTTCTCTTAGTATCTCGTCCCCCAATATCTTAAGAAAGAGCCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR-3UTR CCA 90 bp GACGCACAAGATTTACTTAGTCACCAGAATCCACTTTACCCAGCAGATGGGCAATCAGTTCATTCTTATTaGACAAAAGAAACAGGAAGG +
Preference number: 2 (lower is better)
Translates to: DAQDLLSHQNPLYPADGQSVHSY*TKETGR
Trigger: CCTTCCTGTTTCTTTTGTCCAATAAGAATGAACTGA...TTGCCCATCTGCTGGGTAAAGTGGATTCTGGTGACTAAGTAAATCTTGTGCGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064107.7
ENSMUST00000218111.2
3UTR-3UTR TCA 90 bp CACACACACAAAAATATTCTTCCAGCTATTCGTTCAACCAATACTCGGCCCATAATTGTAAAAGCCTTCTaGAACCAGATTTGGTTTCAG +
Preference number: 2 (lower is better)
Translates to: HTHKNILPAIRSTNTRPIIVKAF*NQIWFQ
Trigger: CTGAAACCAAATCTGGTTTCAGAAGGCTTTTACAAT...TATGGGCCGAGTATTGGTTGAACGAATAGCTGGAAGAATATTTTTGTGTGTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR GCA 72 bp GCTCCGGAGACTGCCCTTCGATCGTCCTCGGAGTGCTaGCGCCTCCATCACCATCACCGCTGCTGCCTTCAC +
Preference number: 3 (lower is better)
Translates to: APETALRSSSEC*RLHHHHRCCLH
Trigger: GTGAAGGCAGCAGCGGTGATGGTGATGGAGGCGGCAGCACTCCGAGGACGATCGAAGGGCAGTCTCCGGAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR GCA 72 bp TCGACGTCAGCATCCCCAAACACTGGCTCCGGAGACTaGCCTTCGATCGTCCTCGGAGTGCTGCCGCCTCCA +
Preference number: 3 (lower is better)
Translates to: STSASPNTGSGD*PSIVLGVLPPP
Trigger: TGGAGGCGGCAGCACTCCGAGGACGATCGAAGGGCAGTCTCCGGAGCCAGTGTTTGGGGATGCTGACGTCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR GCA 72 bp TCGGCTAACTCTGAAGCGTGCCGCTGGCAGGGGAAGTaGACCTTGGGTTCCGTTTCTGCCGCGGCATCCCTT +
Preference number: 3 (lower is better)
Translates to: SANSEACRWQGK*TLGSVSAAASL
Trigger: AAGGGATGCCGCGGCAGAAACGGAACCCAAGGTGCACTTCCCCTGCCAGCGGCACGCTTCAGAGTTAGCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR CCA 72 bp TCTCCAGGGGCATCGGCTAACTCTGAAGCGTGCCGCTaGCAGGGGAAGTGCACCTTGGGTTCCGTTTCTGCC +
Preference number: 3 (lower is better)
Translates to: SPGASANSEACR*QGKCTLGSVSA
Trigger: GGCAGAAACGGAACCCAAGGTGCACTTCCCCTGCCAGCGGCACGCTTCAGAGTTAGCCGATGCCCCTGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR TCA 72 bp TTTGGTACTTCTGCAGTTCAGGTGCCAGGAGCCCACTaGGCGGTCCAAGGCACCCCACGGCACTCGCAACAG +
Preference number: 3 (lower is better)
Translates to: FGTSAVQVPGAH*AVQGTPRHSQQ
Trigger: CTGTTGCGAGTGCCGTGGGGTGCCTTGGACCGCTCAGTGGGCTCCTGGCACCTGAACTGCAGAAGTACCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR GCA 72 bp CCGCTGGCAGGGGAAGTGCACCTTGGGTTCCGTTTCTaGCGCGGCATCCCTTTGGTTCAGTTCCAAGGCTTC +
Preference number: 3 (lower is better)
Translates to: PLAGEVHLGFRF*RGIPLVQFQGF
Trigger: GAAGCCTTGGAACTGAACCAAAGGGATGCCGCGGCAGAAACGGAACCCAAGGTGCACTTCCCCTGCCAGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR CCA 72 bp AACTGCAGCCACGTCGACGTCAGCATCCCCAAACACTaGCTCCGGAGACTGCCCTTCGATCGTCCTCGGAGT +
Preference number: 3 (lower is better)
Translates to: NCSHVDVSIPKH*LRRLPFDRPRS
Trigger: ACTCCGAGGACGATCGAAGGGCAGTCTCCGGAGCCAGTGTTTGGGGATGCTGACGTCGACGTGGCTGCAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR CCA 72 bp ACTCTGAAGCGTGCCGCTGGCAGGGGAAGTGCACCTTaGGTTCCGTTTCTGCCGCGGCATCCCTTTGGTTCA +
Preference number: 3 (lower is better)
Translates to: TLKRAAGRGSAP*VPFLPRHPFGS
Trigger: TGAACCAAAGGGATGCCGCGGCAGAAACGGAACCCAAGGTGCACTTCCCCTGCCAGCGGCACGCTTCAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR TCA 72 bp CCGCCTCCATCACCATCACCGCTGCTGCCTTCACTGTaGGCTGTTACTGTACGACCGGAGGGAAACTCCTCG +
Preference number: 3 (lower is better)
Translates to: PPPSPSPLLPSL*AVTVRPEGNSS
Trigger: CGAGGAGTTTCCCTCCGGTCGTACAGTAACAGCTCACAGTGAAGGCAGCAGCGGTGATGGTGATGGAGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR GCA 72 bp ACGGTCTGCATGAGTTCATGGCTCTGTAGCAGATCCTaGTCCAGCATCTCCTGGGTGAGGCGCCCCATGGTG +
Preference number: 3 (lower is better)
Translates to: TVCMSSWLCSRS*SSISWVRRPMV
Trigger: CACCATGGGGCGCCTCACCCAGGAGATGCTGGAGCAGGATCTGCTACAGAGCCATGAACTCATGCAGACCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR GCA 72 bp AGCTGTTACTGTACGACCGGAGGGAAACTCCTCGGCTaGCCCCAAGCTGCTGGCCTTACAGCCTTCACTCTG +
Preference number: 3 (lower is better)
Translates to: SCYCTTGGKLLG*PQAAGLTAFTL
Trigger: CAGAGTGAAGGCTGTAAGGCCAGCAGCTTGGGGGCAGCCGAGGAGTTTCCCTCCGGTCGTACAGTAACAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR CCA 72 bp GACCGGAGGGAAACTCCTCGGCTGCCCCCAAGCTGCTaGCCTTACAGCCTTCACTCTGTTCTTCTATCAGCC +
Preference number: 3 (lower is better)
Translates to: DRRETPRLPPSC*PYSLHSVLLSA
Trigger: GGCTGATAGAAGAACAGAGTGAAGGCTGTAAGGCCAGCAGCTTGGGGGCAGCCGAGGAGTTTCCCTCCGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR GCA 72 bp CCCCAGAAGAAGGTGGTTGATCACGGGAGAACTATTTaGCTGCGATGGGAGGATGCTGGTCACCGGCCCTTT +
Preference number: 3 (lower is better)
Translates to: PQKKVVDHGRTI*LRWEDAGHRPF
Trigger: AAAGGGCCGGTGACCAGCATCCTCCCATCGCAGGCAAATAGTTCTCCCGTGATCAACCACCTTCTTCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR GCA 72 bp TACGACCGGAGGGAAACTCCTCGGCTGCCCCCAAGCTaGTGGCCTTACAGCCTTCACTCTGTTCTTCTATCA +
Preference number: 3 (lower is better)
Translates to: YDRRETPRLPPS*WPYSLHSVLLS
Trigger: TGATAGAAGAACAGAGTGAAGGCTGTAAGGCCAGCAGCTTGGGGGCAGCCGAGGAGTTTCCCTCCGGTCGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR CCA 72 bp ATACGTATGATCTCTCCCTCCCTGCGTTCCTCCCTCTaGCCGCTTCTATTCAGGAGCCTGCTCTTCTGTCCC +
Preference number: 3 (lower is better)
Translates to: IRMISPSLRSSL*PLLFRSLLFCP
Trigger: GGGACAGAAGAGCAGGCTCCTGAATAGAAGCGGCCAGAGGGAGGAACGCAGGGAGGGAGAGATCATACGTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR CCA 72 bp AAGGTGGTTGATCACGGGAGAACTATTTGCCTGCGATaGGAGGATGCTGGTCACCGGCCCTTTGTCTGCCCT +
Preference number: 3 (lower is better)
Translates to: KVVDHGRTICLR*EDAGHRPFVCP
Trigger: AGGGCAGACAAAGGGCCGGTGACCAGCATCCTCCCATCGCAGGCAAATAGTTCTCCCGTGATCAACCACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR CCA 72 bp ATAGGGGACGGGAGAGATTTTCCCTCCTGGGTGGCCTaGCACGTGGATCACTGCATTCTTGGCTGCTCTGTT +
Preference number: 3 (lower is better)
Translates to: IGDGRDFPSWVA*HVDHCILGCSV
Trigger: AACAGAGCAGCCAAGAATGCAGTGATCCACGTGCCAGGCCACCCAGGAGGGAAAATCTCTCCCGTCCCCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR-3UTR CAA 90 bp CCACTTTACCCAGCAGATGGGCAAAGGTCCCATCTGGTCCCCACCATGGAACTTGTGCGGTGTTCTGGTTaGGAGCTGTGCATCTGCAGT +
Preference number: 3 (lower is better)
Translates to: PLYPADGQRSHLVPTMELVRCSG*ELCICS
Trigger: ACTGCAGATGCACAGCTCCAAACCAGAACACCGCAC...AAGTTCCATGGTGGGGACCAGATGGGACCTTTGCCCATCTGCTGGGTAAAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR GCA 72 bp AGCTGCTGCTGTTGCTTCTTCTTAATTCGGGAGTACTaGCGCTTCAGGGCGTTGATGTCCGTGGTCATCCGC +
Preference number: 3 (lower is better)
Translates to: SCCCCFFLIREY*RFRALMSVVIR
Trigger: GCGGATGACCACGGACATCAACGCCCTGAAGCGGCAGTACTCCCGAATTAAGAAGAAGCAACAGCAGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR CCA 72 bp GAGCTGGTAGCGATCAGAACCATGTTCAGAGGATGCTaGAGTTCCACACAGAGCCCATCGAGTCCTTGCGAG +
Preference number: 3 (lower is better)
Translates to: ELVAIRTMFRGC*SSTQSPSSPCE
Trigger: CTCGCAAGGACTCGATGGGCTCTGTGTGGAACTCCAGCATCCTCTGAACATGGTTCTGATCGCTACCAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR CCA 72 bp TCACGGGAGAACTATTTGCCTGCGATGGGAGGATGCTaGTCACCGGCCCTTTGTCTGCCCTTATGTACACCT +
Preference number: 3 (lower is better)
Translates to: SRENYLPAMGGC*SPALCLPLCTP
Trigger: AGGTGTACATAAGGGCAGACAAAGGGCCGGTGACCAGCATCCTCCCATCGCAGGCAAATAGTTCTCCCGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR GCA 72 bp GTCACTGTGCGGTGTTCTGGTTTGGAGCTGTGCATCTaGAGTGGAGAGAGAGCTGGTAGCGATCAGAACCAT +
Preference number: 3 (lower is better)
Translates to: VTVRCSGLELCI*SGERAGSDQNH
Trigger: ATGGTTCTGATCGCTACCAGCTCTCTCTCCACTGCAGATGCACAGCTCCAAACCAGAACACCGCACAGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR GCA 72 bp GTAACAGTCACTGTGCGGTGTTCTGGTTTGGAGCTGTaGATCTGCAGTGGAGAGAGAGCTGGTAGCGATCAG +
Preference number: 3 (lower is better)
Translates to: VTVTVRCSGLEL*ICSGERAGSDQ
Trigger: CTGATCGCTACCAGCTCTCTCTCCACTGCAGATGCACAGCTCCAAACCAGAACACCGCACAGTGACTGTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR GCA 72 bp TTCTTTAATCTGCTTTTGGTACTTCTGCAGTTCAGGTaGCAGGAGCCCACTGAGCGGTCCAAGGCACCCCAC +
Preference number: 3 (lower is better)
Translates to: FFNLLLVLLQFR*QEPTERSKAPH
Trigger: GTGGGGTGCCTTGGACCGCTCAGTGGGCTCCTGGCACCTGAACTGCAGAAGTACCAAAAGCAGATTAAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR GCA 72 bp AGAAGAAGGTGGTTGATCACGGGAGAACTATTTGCCTaGGATGGGAGGATGCTGGTCACCGGCCCTTTGTCT +
Preference number: 3 (lower is better)
Translates to: RRRWLITGELFA*DGRMLVTGPLS
Trigger: AGACAAAGGGCCGGTGACCAGCATCCTCCCATCGCAGGCAAATAGTTCTCCCGTGATCAACCACCTTCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR CCA 72 bp CGGTGTTTGCATACAGTGTCCGACACGTGGGGAAGATaGACAGTCACAACTGCCCCTTTGTACATGCTGTGG +
Preference number: 3 (lower is better)
Translates to: RCLHTVSDTWGR*TVTTAPLYMLW
Trigger: CCACAGCATGTACAAAGGGGCAGTTGTGACTGTCCATCTTCCCCACGTGTCGGACACTGTATGCAAACACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR CCA 72 bp AAAGGGGCCATCGAATACACGGTCTGCATGAGTTCATaGCTCTGTAGCAGATCCTGCTCCAGCATCTCCTGG +
Preference number: 3 (lower is better)
Translates to: KGAIEYTVCMSS*LCSRSCSSISW
Trigger: CCAGGAGATGCTGGAGCAGGATCTGCTACAGAGCCATGAACTCATGCAGACCGTGTATTCGATGGCCCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR CCA 72 bp TGCATGGTACTCACTCCGACAGGAATTGATGGCTCCTaGGCTCAGCTCTGCGATGTTGTTCGATCTGAGGGT +
Preference number: 3 (lower is better)
Translates to: CMVLTPTGIDGS*AQLCDVVRSEG
Trigger: ACCCTCAGATCGAACAACATCGCAGAGCTGAGCCCAGGAGCCATCAATTCCTGTCGGAGTGAGTACCATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR CCA 72 bp TTTGAGGTGCTTCCCGGGAGAAGTTTGATGGCAGTCTaGTTTTCTCCAGGGGCATCGGCTAACTCTGAAGCG +
Preference number: 3 (lower is better)
Translates to: FEVLPGRSLMAV*FSPGASANSEA
Trigger: CGCTTCAGAGTTAGCCGATGCCCCTGGAGAAAACCAGACTGCCATCAAACTTCTCCCGGGAAGCACCTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR CCA 72 bp TCATCTGAGGGAAGTGCACGTTTGGGGTTCTTTCTGTaGGGCCATATAACCCCAAATTCCTGGCCGTGGCTG +
Preference number: 3 (lower is better)
Translates to: SSEGSARLGFFL*GHITPNSWPWL
Trigger: CAGCCACGGCCAGGAATTTGGGGTTATATGGCCCCACAGAAAGAACCCCAAACGTGCACTTCCCTCAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR-3UTR CAA 90 bp AGGGAAACTCCTCGGCTGCCCCCAAGCTGCTGGCCTTACAGCCTTCACTCTGTTTCCATCATCATACTGTaGAACGCTGCATGGTACTCA +
Preference number: 3 (lower is better)
Translates to: RETPRLPPSCWPYSLHSVSIIIL*NAAWYS
Trigger: TGAGTACCATGCAGCGTTCAACAGTATGATGATGGA...AACAGAGTGAAGGCTGTAAGGCCAGCAGCTTGGGGGCAGCCGAGGAGTTTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR GCA 72 bp TTCTTATTGGACAAAAGAAACAGGAAGGGCGTAGCCTaGCACGTGAGTCTAGCCACTGAGCCACTTCGAGGC +
Preference number: 3 (lower is better)
Translates to: FLLDKRNRKGVA*HVSLATEPLRG
Trigger: GCCTCGAAGTGGCTCAGTGGCTAGACTCACGTGGCAGGCTACGCCCTTCCTGTTTCTTTTGTCCAATAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064107.7
ENSMUST00000218111.2
3UTR CCA 72 bp ATCCACTTTACCCAGCAGATGGGCAAAGGTCCCATCTaGTCCCCACCATGGAACTTCCAATTCCCGTTTGGA +
Preference number: 3 (lower is better)
Translates to: IHFTQQMGKGPI*SPPWNFQFPFG
Trigger: TCCAAACGGGAATTGGAAGTTCCATGGTGGGGACCAGATGGGACCTTTGCCCATCTGCTGGGTAAAGTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064107.7
ENSMUST00000218111.2
3UTR CCA 72 bp GTCATCCGCTCCATCATCATACTGTTGAACGCTGCATaGTACTCACTCCGACAGGAATTGATGGCTCCTGGG +
Preference number: 3 (lower is better)
Translates to: VIRSIIILLNAA*YSLRQELMAPG
Trigger: CCCAGGAGCCATCAATTCCTGTCGGAGTGAGTACCATGCAGCGTTCAACAGTATGATGATGGAGCGGATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR-3UTR CAA 90 bp AGGGAAACTCCTCGGCTGCCCCCAAGCTGCTGGCCTTACAGCCTTCACTCTGTTTTCTTTAATCTGCTTTaGGTACTTCTGCAGTTCAGG +
Preference number: 3 (lower is better)
Translates to: RETPRLPPSCWPYSLHSVFFNLL*VLLQFR
Trigger: CCTGAACTGCAGAAGTACCAAAAGCAGATTAAAGAA...AACAGAGTGAAGGCTGTAAGGCCAGCAGCTTGGGGGCAGCCGAGGAGTTTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR-3UTR CAA 90 bp GGGCTGATGGTGCTCAGCTCTGAACCTCTCAGTTCATTCTTATTGGACAAAAGATCACTCCGACAGGAATaGATGGCTCCTGGGCTCAGC +
Preference number: 3 (lower is better)
Translates to: GLMVLSSEPLSSFLLDKRSLRQE*MAPGLS
Trigger: GCTGAGCCCAGGAGCCATCAATTCCTGTCGGAGTGA...TCTTTTGTCCAATAAGAATGAACTGAGAGGTTCAGAGCTGAGCACCATCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR TCA 72 bp CCACCATGGAACTTCCAATTCCCGTTTGGATGGGGCTaGTGGTGCTCAGCTCTGAACCTCTCAGTTCATTCT +
Preference number: 3 (lower is better)
Translates to: PPWNFQFPFGWG*WCSALNLSVHS
Trigger: AGAATGAACTGAGAGGTTCAGAGCTGAGCACCATCAGCCCCATCCAAACGGGAATTGGAAGTTCCATGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064107.7
ENSMUST00000218111.2
3UTR TCA 72 bp GTCACTATCTCTGGCCTTACTGTGTCGCCCAGAAACTaGAGTGGGCTTAATCGTGGCTGGAAACGGTGTGAT +
Preference number: 3 (lower is better)
Translates to: VTISGLTVSPRN*SGLNRGWKRCD
Trigger: ATCACACCGTTTCCAGCCACGATTAAGCCCACTTCAGTTTCTGGGCGACACAGTAAGGCCAGAGATAGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR TCA 72 bp TCTTCTATCAGCCCTACCGTGTCTCCGCAGCCTAGATaGCTCTTGGTCCTCGGCATGTTCTTTTTGTGGACT +
Preference number: 3 (lower is better)
Translates to: SSISPTVSPQPR*LLVLGMFFLWT
Trigger: AGTCCACAAAAAGAACATGCCGAGGACCAAGAGTCATCTAGGCTGCGGAGACACGGTAGGGCTGATAGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR CCA 72 bp AAGTTCTTCCGGTGTTTGCATACAGTGTCCGACACGTaGGGAAGATGGACAGTCACAACTGCCCCTTTGTAC +
Preference number: 3 (lower is better)
Translates to: KFFRCLHTVSDT*GRWTVTTAPLY
Trigger: GTACAAAGGGGCAGTTGTGACTGTCCATCTTCCCCACGTGTCGGACACTGTATGCAAACACCGGAAGAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR-3UTR CAA 90 bp GTTCTTCCGGTGTTTGCATACAGTGTCCGACACGTGGGGAAGATGGACAGTCACAGGTCAGGGAATGTGTaGTTTCAGGGATCCAAAAAG +
Preference number: 3 (lower is better)
Translates to: VLPVFAYSVRHVGKMDSHRSGNV*FQGSKK
Trigger: CTTTTTGGATCCCTGAAACAACACATTCCCTGACCT...GTGACTGTCCATCTTCCCCACGTGTCGGACACTGTATGCAAACACCGGAAGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR-3UTR CAA 90 bp GTTCTTCCGGTGTTTGCATACAGTGTCCGACACGTGGGGAAGATGGACAGTCACTCACTCAAACCAACATaGACGGCTTCAACAGAGTTC +
Preference number: 3 (lower is better)
Translates to: VLPVFAYSVRHVGKMDSHSLKPT*TASTEF
Trigger: GAACTCTGTTGAAGCCGTCAATGTTGGTTTGAGTGA...GTGACTGTCCATCTTCCCCACGTGTCGGACACTGTATGCAAACACCGGAAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR TCA 72 bp GTGATCAAGCGGGATACAGGAGAGAGCGTTGAGAAATaGCTAGGAGGAAGGAACGCTAAGCTTCCTGCACAT +
Preference number: 3 (lower is better)
Translates to: VIKRDTGESVEK*LGGRNAKLPAH
Trigger: ATGTGCAGGAAGCTTAGCGTTCCTTCCTCCTAGTCATTTCTCAACGCTCTCTCCTGTATCCCGCTTGATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR GCA 72 bp TGCATAGTAGAGACAAGAGATGCTCTCCCTCTGATCTaGTGGGACCAGGGTAGGAGTGGAAAGACAGAAAGA +
Preference number: 3 (lower is better)
Translates to: CIVETRDALPLI*WDQGRSGKTER
Trigger: TCTTTCTGTCTTTCCACTCCTACCCTGGTCCCAGCAGATCAGAGGGAGAGCATCTCTTGTCTCTACTATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR GCA 72 bp CGGTGTGATGTTATAGGTATACTTTTCCCTCAACTCTaGCAACTGCGGGAACGGGAAAGGGGCCATCGAATA +
Preference number: 3 (lower is better)
Translates to: RCDVIGILFPQL*QLRERERGHRI
Trigger: TATTCGATGGCCCCTTTCCCGTTCCCGCAGTTGGCAGAGTTGAGGGAAAAGTATACCTATAACATCACACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR CCA 72 bp CCACAAAATTCAAGTAACAGTCACTGTGCGGTGTTCTaGTTTGGAGCTGTGCATCTGCAGTGGAGAGAGAGC +
Preference number: 3 (lower is better)
Translates to: PQNSSNSHCAVF*FGAVHLQWRES
Trigger: GCTCTCTCTCCACTGCAGATGCACAGCTCCAAACCAGAACACCGCACAGTGACTGTTACTTGAATTTTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR CCA 72 bp CCTCCAAACACTAAGACCCTCAAGAGCCAGGGATCTTaGTGGAGAGAGAACCATTTTCTCTTCAAGTCAGTC +
Preference number: 3 (lower is better)
Translates to: PPNTKTLKSQGS*WRENHFLFKSV
Trigger: GACTGACTTGAAGAGAAAATGGTTCTCTCTCCACCAAGATCCCTGGCTCTTGAGGGTCTTAGTGTTTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR TCA 72 bp AGGAACGCTAAGCTTCCTGCACATTCAGACAGGAAATaGCTCCGCCACCACAACAGTGAGAATCTTTATGCA +
Preference number: 3 (lower is better)
Translates to: RNAKLPAHSDRK*LRHHNSENLYA
Trigger: TGCATAAAGATTCTCACTGTTGTGGTGGCGGAGTCATTTCCTGTCTGAATGTGCAGGAAGCTTAGCGTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR TCA 72 bp TTCAGAAATAGCAAAGCAACTCACTCAAACCAACATTaGCGGCTTCAACAGAGTTCCTGGGAGGAGCCAAAG +
Preference number: 3 (lower is better)
Translates to: FRNSKATHSNQH*RLQQSSWEEPK
Trigger: CTTTGGCTCCTCCCAGGAACTCTGTTGAAGCCGTCAATGTTGGTTTGAGTGAGTTGCTTTGCTATTTCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR TCA 72 bp AAGTGGCAAGGCTCAGAAGTCCGTCAGTTCACATTGTaGTTACCTGGTACAGTGCATGCATGTTATCAGTAC +
Preference number: 3 (lower is better)
Translates to: KWQGSEVRQFTL*LPGTVHACYQY
Trigger: GTACTGATAACATGCATGCACTGTACCAGGTAATCACAATGTGAACTGACGGACTTCTGAGCCTTGCCACTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR TCA 72 bp AGATCTAGATCTTTTTGGAGAGGACTGAGGTGCAGTTaGCTTCCAGAAAAAGTGCTGAAAGGGTACAGGCAG +
Preference number: 3 (lower is better)
Translates to: RSRSFWRGLRCS*LPEKVLKGYRQ
Trigger: CTGCCTGTACCCTTTCAGCACTTTTTCTGGAAGTCAACTGCACCTCAGTCCTCTCCAAAAAGATCTAGATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR GCA 72 bp CAGAAAGGTGGCAATCAGCAAACCGTTCAGAGCAGTTaGTTAATGCATAGTCCACCTGTGTCTCTGCATATA +
Preference number: 3 (lower is better)
Translates to: QKGGNQQTVQSS*LMHSPPVSLHI
Trigger: TATATGCAGAGACACAGGTGGACTATGCATTAAGCAACTGCTCTGAACGGTTTGCTGATTGCCACCTTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR GCA 72 bp GGAAATAAACTGCAGTTATTAAGTTCTTCCGGTGTTTaGATACAGTGTCCGACACGTGGGGAAGATGGACAG +
Preference number: 3 (lower is better)
Translates to: GNKLQLLSSSGV*IQCPTRGEDGQ
Trigger: CTGTCCATCTTCCCCACGTGTCGGACACTGTATGCAAACACCGGAAGAACTTAATAACTGCAGTTTATTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR CCA 72 bp AGGCTCAGAAGTCCGTCAGTTCACATTGTGATTACCTaGTACAGTGCATGCATGTTATCAGTACAGAGAGCT +
Preference number: 3 (lower is better)
Translates to: RLRSPSVHIVIT*YSACMLSVQRA
Trigger: AGCTCTCTGTACTGATAACATGCATGCACTGTACCAGGTAATCACAATGTGAACTGACGGACTTCTGAGCCT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR CCA 72 bp CATGTTCTTTTTGTGGACTCGGATGTGAGTCCGCCATaGAGAGTTGAGCTTTGTCTTAATGTCTTCATAGGG +
Preference number: 3 (lower is better)
Translates to: HVLFVDSDVSPP*RVELCLNVFIG
Trigger: CCCTATGAAGACATTAAGACAAAGCTCAACTCTCCATGGCGGACTCACATCCGAGTCCACAAAAAGAACATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR TCA 72 bp AATTCCCGTTTGGATGGGGCTGATGGTGCTCAGCTCTaGACCTCTCAGTTCATTCTTATTGGACAAAAGAAA +
Preference number: 3 (lower is better)
Translates to: NSRLDGADGAQL*TSQFILIGQKK
Trigger: TTTCTTTTGTCCAATAAGAATGAACTGAGAGGTTCAGAGCTGAGCACCATCAGCCCCATCCAAACGGGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064107.7
ENSMUST00000218111.2
3UTR TCA 72 bp CAGCTTGTCGTAGAAGAAACACTGGATTATTTACCGTaGGTTACTGAAGTGCCACTTAACCTGTGTGGCTCA +
Preference number: 3 (lower is better)
Translates to: QLVVEETLDYLP*VTEVPLNLCGS
Trigger: TGAGCCACACAGGTTAAGTGGCACTTCAGTAACTCACGGTAAATAATCCAGTGTTTCTTCTACGACAAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR TCA 72 bp AATTTTCATGGTGAGGCAGTTTCACAACTCATTCTGTaGACACCATTCCGGGACTCTATACCAGCTAGAGAA +
Preference number: 3 (lower is better)
Translates to: NFHGEAVSQLIL*TPFRDSIPARE
Trigger: TTCTCTAGCTGGTATAGAGTCCCGGAATGGTGTTCACAGAATGAGTTGTGAAACTGCCTCACCATGAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR CCA 72 bp AGAAATTCTCTTCTTGTGCTTAACTTTGGGAAACAGTaGGTCTCATCATCTGGGGGTGGCATACAAAGTAAG +
Preference number: 3 (lower is better)
Translates to: RNSLLVLNFGKQ*VSSSGGGIQSK
Trigger: CTTACTTTGTATGCCACCCCCAGATGATGAGACCCACTGTTTCCCAAAGTTAAGCACAAGAAGAGAATTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR TCA 72 bp ACATTCAGACAGGAAATGACTCCGCCACCACAACAGTaGGAATCTTTATGCATATATCTCTGTGATCAGTAC +
Preference number: 3 (lower is better)
Translates to: TFRQEMTPPPQQ*ESLCIYLCDQY
Trigger: GTACTGATCACAGAGATATATGCATAAAGATTCTCACTGTTGTGGTGGCGGAGTCATTTCCTGTCTGAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR CCA 72 bp TGTAACAACTTACCAGCTATTCCATCTTGCATCCTTTaGGGTAAAACTACCATGTGGGGGATTAAATGTGTC +
Preference number: 3 (lower is better)
Translates to: CNNLPAIPSCIL*GKTTMWGIKCV
Trigger: GACACATTTAATCCCCCACATGGTAGTTTTACCCCAAAGGATGCAAGATGGAATAGCTGGTAAGTTGTTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR CAA 72 bp AACTCTGAAGCGTGCCGCTGGCAGGGGAAGTGCACCTaGGGTTCCGTTTCTGCCGCGGCATCCCTTTGGTTC +
Preference number: 4 (lower is better)
Translates to: NSEACRWQGKCT*GSVSAAASLWF
Trigger: GAACCAAAGGGATGCCGCGGCAGAAACGGAACCCAAGGTGCACTTCCCCTGCCAGCGGCACGCTTCAGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
CDS-3UTR TCA 90 bp AATCCACTTTACCCAGCAGATGGGCAAAGGTCCCATCTGGTCCCCACCATGGAAGTGCCAGGAGCCCACTaGGCGGTCCAAGGCACCCCA +
Preference number: 4 (lower is better)
Translates to: NPLYPADGQRSHLVPTMEVPGAH*AVQGTP
Trigger: TGGGGTGCCTTGGACCGCTCAGTGGGCTCCTGGCAC...TTCCATGGTGGGGACCAGATGGGACCTTTGCCCATCTGCTGGGTAAAGTGGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR TCA 90 bp CCAAGGCACCCCACGGCACTCGCAACAGCATCCTCATCATCCGGGCCGTTCTCAGCGACACCCTCAGGATaGTCTCTGAACCTTCGAAGN +
Preference number: 4 (lower is better)
Translates to: PRHPTALATASSSSGPFSATPSG*SLNLRX
Trigger: NCTTCGAAGGTTCAGAGATCATCCTGAGGGTGTCGC...TGAGAACGGCCCGGATGATGAGGATGCTGTTGCGAGTGCCGTGGGGTGCCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
CDS-3UTR CCA 90 bp ACAGTCACTGTGCGGTGTTCTGGTTTGGAGCTGTGCATCTGCAGTGGAGAGAGAGCACATTGCTCAGGATaGTGCCCACGCCACCGCCGC +
Preference number: 4 (lower is better)
Translates to: TVTVRCSGLELCICSGERAHCSG*CPRHRR
Trigger: GCGGCGGTGGCGTGGGCACCATCCTGAGCAATGTGC...TCTCTCTCCACTGCAGATGCACAGCTCCAAACCAGAACACCGCACAGTGACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR CCA 90 bp CCTCCCTCTGGCCGCTTCTATTCAGGAGCCTGCTCTTCTGTCCCCTTCTGGGCACCAAATTCCTGGCCGTaGCTGACTTTCGCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: PPSGRFYSGACSSVPFWAPNSWP*LTFAVA
Trigger: AGCCACTGCGAAAGTCAGCCACGGCCAGGAATTTGG...TGCCCAGAAGGGGACAGAAGAGCAGGCTCCTGAATAGAAGCGGCCAGAGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR TCA 90 bp GGCAAGGCTCAGAAGTCCGTCAGTTCACATTGTGATTACCTGGTACAGTGCATGCCAGCATCTCCTGGGTaGGGCGCCCCATGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: GKAQKSVSSHCDYLVQCMPASPG*GAPWCR
Trigger: ACGGCACCATGGGGCGCCTCACCCAGGAGATGCTGG...CATGCACTGTACCAGGTAATCACAATGTGAACTGACGGACTTCTGAGCCTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR GCA 90 bp ACACCATATACGTATGATCTCTCCCTCCCTGCGTTCCTCCCTCTGGCCGCTTCTCTGCTCTCCCAGCTTTaGCCAGATGGCCAGCGACAC +
Preference number: 4 (lower is better)
Translates to: TPYTYDLSLPAFLPLAASLLSQL*PDGQRH
Trigger: GTGTCGCTGGCCATCTGGGCAAAGCTGGGAGAGCAG...AGAAGCGGCCAGAGGGAGGAACGCAGGGAGGGAGAGATCATACGTATATGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR GCA 90 bp ACACCATATACGTATGATCTCTCCCTCCCTGCGTTCCTCCCTCTGGCCGCTTCTCTCAACTCTGCCAACTaGGGGAACGGGAAAGGGGCC +
Preference number: 4 (lower is better)
Translates to: TPYTYDLSLPAFLPLAASLNSAN*GNGKGA
Trigger: GGCCCCTTTCCCGTTCCCGCAGTTGGCAGAGTTGAG...AGAAGCGGCCAGAGGGAGGAACGCAGGGAGGGAGAGATCATACGTATATGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR CCA 90 bp CCACTTTACCCAGCAGATGGGCAAAGGTCCCATCTGGTCCCCACCATGGAACTTGCGATGGGAGGATGCTaGTCACCGGCCCTTTGTCTG +
Preference number: 4 (lower is better)
Translates to: PLYPADGQRSHLVPTMELAMGGC*SPALCL
Trigger: CAGACAAAGGGCCGGTGACCAGCATCCTCCCATCGC...AAGTTCCATGGTGGGGACCAGATGGGACCTTTGCCCATCTGCTGGGTAAAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR CCA 90 bp CTGTGTCGCCCAGAAACTGAAGTGGGCTTAATCGTGGCTGGAAACGGTGTGATGCCAGCTTTGCCCAGATaGCCAGCGACACCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: LCRPETEVGLIVAGNGVMPALPR*PATPSG
Trigger: TCCTGAGGGTGTCGCTGGCCATCTGGGCAAAGCTGG...CATCACACCGTTTCCAGCCACGATTAAGCCCACTTCAGTTTCTGGGCGACACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
CDS-3UTR CCA 90 bp ACAGTCACTGTGCGGTGTTCTGGTTTGGAGCTGTGCATCTGCAGTGGAGAGAGACCCTCCTGGGTGGCCTaGCACGTGGATCACTGCATT +
Preference number: 4 (lower is better)
Translates to: TVTVRCSGLELCICSGERPSWVA*HVDHCI
Trigger: AATGCAGTGATCCACGTGCCAGGCCACCCAGGAGGG...TCTCTCTCCACTGCAGATGCACAGCTCCAAACCAGAACACCGCACAGTGACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR TCA 90 bp CCTCCCTCTGGCCGCTTCTATTCAGGAGCCTGCTCTTCTGTCCCCTTCTGGGCACCATCATCATACTGTTaGACGCTGCATGGTACTCAC +
Preference number: 4 (lower is better)
Translates to: PPSGRFYSGACSSVPFWAPSSYC*TLHGTH
Trigger: GTGAGTACCATGCAGCGTTCAACAGTATGATGATGG...TGCCCAGAAGGGGACAGAAGAGCAGGCTCCTGAATAGAAGCGGCCAGAGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR GCA 90 bp AGAAGGCCAGAAGAGGGCTTAACAGTCTACAGGTTGTCTTTTCTAAAGAGCTCACTCCCGGCTCCAAGGTaGAGAGCAACCGGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: RRPEEGLTVYRLSFLKSSLPAPR*RATGAR
Trigger: CCGCGCCCCGGTTGCTCTGCACCTTGGAGCCGGGAG...TGAGCTCTTTAGAAAAGACAACCTGTAGACTGTTAAGCCCTCTTCTGGCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR TCA 90 bp ACAGTCACTGTGCGGTGTTCTGGTTTGGAGCTGTGCATCTGCAGTGGAGAGAGATGCAGCTGCGCTTCTTaGGCACATTGCTCAGGATGG +
Preference number: 4 (lower is better)
Translates to: TVTVRCSGLELCICSGERCSCAS*AHCSGW
Trigger: CCATCCTGAGCAATGTGCTCAAGAAGCGCAGCTGCA...TCTCTCTCCACTGCAGATGCACAGCTCCAAACCAGAACACCGCACAGTGACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR TCA 90 bp AATCCACTTTACCCAGCAGATGGGCAAAGGTCCCATCTGGTCCCCACCATGGAACTTTGGTATCCCCGTTaGCAGTCTGGCCACAGCCTT +
Preference number: 4 (lower is better)
Translates to: NPLYPADGQRSHLVPTMELWYPR*QSGHSL
Trigger: AAGGCTGTGGCCAGACTGTCAACGGGGATACCAAAG...TTCCATGGTGGGGACCAGATGGGACCTTTGCCCATCTGCTGGGTAAAGTGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR TCA 90 bp GAGACAAGAGATGCTCTCCCTCTGATCTGCTGGGACCAGGGTAGGAGTGGAAAGGCGACACCCTCAGGATaGTCTCTGAACCTTCGAAGA +
Preference number: 4 (lower is better)
Translates to: ETRDALPLICWDQGRSGKATPSG*SLNLRR
Trigger: TCTTCGAAGGTTCAGAGATCATCCTGAGGGTGTCGC...CTTTCCACTCCTACCCTGGTCCCAGCAGATCAGAGGGAGAGCATCTCTTGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR TCA 90 bp AATCCACTTTACCCAGCAGATGGGCAAAGGTCCCATCTGGTCCCCACCATGGAATTGTGGACTCGGATGTaGGTCCGCCATGGAGAGTTG +
Preference number: 4 (lower is better)
Translates to: NPLYPADGQRSHLVPTMELWTRM*VRHGEL
Trigger: CAACTCTCCATGGCGGACTCACATCCGAGTCCACAA...TTCCATGGTGGGGACCAGATGGGACCTTTGCCCATCTGCTGGGTAAAGTGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR TCA 90 bp ACAGTCACTGTGCGGTGTTCTGGTTTGGAGCTGTGCATCTGCAGTGGAGAGAGAGAAGATGGGGGTTTTTaGGGTGCTTCCCGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: TVTVRCSGLELCICSGEREDGGF*GASREK
Trigger: CTTCTCCCGGGAAGCACCTCAAAAACCCCCATCTTC...TCTCTCTCCACTGCAGATGCACAGCTCCAAACCAGAACACCGCACAGTGACTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR GCA 90 bp GGGGACGAGATACTAAGAGAACAGTTGATAGACAACCCCACCCAATTATCCATCCATTGCTCAGGATGGTaGCCACGCCACCGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: GDEILREQLIDNPTQLSIHCSGW*PRHRRP
Trigger: AGGGCGGCGGTGGCGTGGGCACCATCCTGAGCAATG...GATGGATAATTGGGTGGGGTTGTCTATCAACTGTTCTCTTAGTATCTCGTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR GCA 90 bp GGCAAGGCTCAGAAGTCCGTCAGTTCACATTGTGATTACCTGGTACAGTGCATGCTTCTGCAGTTCAGGTaGCAGGAGCCCACTGAGCGG +
Preference number: 4 (lower is better)
Translates to: GKAQKSVSSHCDYLVQCMLLQFR*QEPTER
Trigger: CCGCTCAGTGGGCTCCTGGCACCTGAACTGCAGAAG...CATGCACTGTACCAGGTAATCACAATGTGAACTGACGGACTTCTGAGCCTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR GCA 90 bp CCACTTTACCCAGCAGATGGGCAAAGGTCCCATCTGGTCCCCACCATGGAACTTGGAGAACTATTTGCCTaGGATGGGAGGATGCTGGTC +
Preference number: 4 (lower is better)
Translates to: PLYPADGQRSHLVPTMELGELFA*DGRMLV
Trigger: GACCAGCATCCTCCCATCGCAGGCAAATAGTTCTCC...AAGTTCCATGGTGGGGACCAGATGGGACCTTTGCCCATCTGCTGGGTAAAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR CCA 90 bp ACGTATGATCTCTCCCTCCCTGCGTTCCTCCCTCTGGCCGCTTCTATTCAGGAGATAACCCCAAATTCCTaGCCGTGGCTGACTTTCGCA +
Preference number: 4 (lower is better)
Translates to: TYDLSLPAFLPLAASIQEITPNS*PWLTFA
Trigger: TGCGAAAGTCAGCCACGGCCAGGAATTTGGGGTTAT...CTCCTGAATAGAAGCGGCCAGAGGGAGGAACGCAGGGAGGGAGAGATCATACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR CAA 72 bp CAGGAATTGATGGCTCCTGGGCTCAGCTCTGCGATGTaGTTCGATCTGAGGGTCTGTTCCTCAGTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: QELMAPGLSSAM*FDLRVCSSVAS
Trigger: AGAAGCGACTGAGGAACAGACCCTCAGATCGAACAACATCGCAGAGCTGAGCCCAGGAGCCATCAATTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR CAA 72 bp CTGTTGAACGCTGCATGGTACTCACTCCGACAGGAATaGATGGCTCCTGGGCTCAGCTCTGCGATGTTGTTC +
Preference number: 4 (lower is better)
Translates to: LLNAAWYSLRQE*MAPGLSSAMLF
Trigger: GAACAACATCGCAGAGCTGAGCCCAGGAGCCATCAATTCCTGTCGGAGTGAGTACCATGCAGCGTTCAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
CDS-3UTR GCA 90 bp CCTCCCTCTGGCCGCTTCTATTCAGGAGCCTGCTCTTCTGTCCCCTTCTGGGCACATATCCACAGACAGTaGCCGGAGATTATTGACAAA +
Preference number: 4 (lower is better)
Translates to: PPSGRFYSGACSSVPFWAHIHRQ*PEIIDK
Trigger: TTTGTCAATAATCTCCGGGCACTGTCTGTGGATATG...TGCCCAGAAGGGGACAGAAGAGCAGGCTCCTGAATAGAAGCGGCCAGAGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR GCA 90 bp CATACTGTTGAACGCTGCATGGTACTCACTCCGACAGGAATTGATGGCTCCTGGCTATTCTCCCAGCTTTaGCCAGATGGCCAGCGACAC +
Preference number: 4 (lower is better)
Translates to: HTVERCMVLTPTGIDGSWLFSQL*PDGQRH
Trigger: GTGTCGCTGGCCATCTGGGCAAAGCTGGGAGAATAG...CCAGGAGCCATCAATTCCTGTCGGAGTGAGTACCATGCAGCGTTCAACAGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
CDS-3UTR CCA 90 bp GAGACAAGAGATGCTCTCCCTCTGATCTGCTGGGACCAGGGTAGGAGTGGAAAGCGATTTGAATTCCCATaGAGTCGTCATCCGGGTTGC +
Preference number: 4 (lower is better)
Translates to: ETRDALPLICWDQGRSGKRFEFP*SRHPGC
Trigger: GCAACCCGGATGACGACTCCATGGGAATTCAAATCG...CTTTCCACTCCTACCCTGGTCCCAGCAGATCAGAGGGAGAGCATCTCTTGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR CCA 90 bp GGAGAGAGAGCTGGTAGCGATCAGAACCATGTTCAGAGGATGCTGGAGTTCCACGGAATTGATGGCTCCTaGGCTCAGCTCTGCGATGTT +
Preference number: 4 (lower is better)
Translates to: GERAGSDQNHVQRMLEFHGIDGS*AQLCDV
Trigger: AACATCGCAGAGCTGAGCCCAGGAGCCATCAATTCC...GTGGAACTCCAGCATCCTCTGAACATGGTTCTGATCGCTACCAGCTCTCTCTCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR TCA 90 bp GGCAAGGCTCAGAAGTCCGTCAGTTCACATTGTGATTACCTGGTACAGTGCATGGCCCTTATGTACACCTaGTGGAGCTGCTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: GKAQKSVSSHCDYLVQCMALMYT*WSCCCC
Trigger: GCAACAGCAGCAGCTCCATCAGGTGTACATAAGGGC...CATGCACTGTACCAGGTAATCACAATGTGAACTGACGGACTTCTGAGCCTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR GCA 90 bp GTTCTTCCGGTGTTTGCATACAGTGTCCGACACGTGGGGAAGATGGACAGTCACTCGCAACATTCTATCTaGTCTCCCAGCTTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: VLPVFAYSVRHVGKMDSHSQHSI*SPSFAQ
Trigger: CTGGGCAAAGCTGGGAGAGCAGATAGAATGTTGCGA...GTGACTGTCCATCTTCCCCACGTGTCGGACACTGTATGCAAACACCGGAAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR GCA 90 bp GAACTTCCAATTCCCGTTTGGATGGGGCTGATGGTGCTCAGCTCTGAACCTCTCTGCTTTTGGTACTTCTaGAGTTCAGGTGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: ELPIPVWMGLMVLSSEPLCFWYF*SSGARS
Trigger: GCTCCTGGCACCTGAACTGCAGAAGTACCAAAAGCA...GAGAGGTTCAGAGCTGAGCACCATCAGCCCCATCCAAACGGGAATTGGAAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR CCA 90 bp AACCACAAAATTCAAGTAACAGTCACTGTGCGGTGTTCTGGTTTGGAGCTGTGCCCAGCTTTGCCCAGATaGCCAGCGACACCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: NHKIQVTVTVRCSGLELCPALPR*PATPSG
Trigger: TCCTGAGGGTGTCGCTGGCCATCTGGGCAAAGCTGG...GCACAGCTCCAAACCAGAACACCGCACAGTGACTGTTACTTGAATTTTGTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR CCA 90 bp ACACCATATACGTATGATCTCTCCCTCCCTGCGTTCCTCCCTCTGGCCGCTTCTGATGTGAGTCCGCCATaGAGAGTTGAGCTTTGTCTT +
Preference number: 4 (lower is better)
Translates to: TPYTYDLSLPAFLPLAASDVSPP*RVELCL
Trigger: AAGACAAAGCTCAACTCTCCATGGCGGACTCACATC...AGAAGCGGCCAGAGGGAGGAACGCAGGGAGGGAGAGATCATACGTATATGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR GCA 90 bp GACGCACAAGATTTACTTAGTCACCAGAATCCACTTTACCCAGCAGATGGGCAACACCCTGTCTTGCTCTaGCTCCTGGCCACAGTAGGA +
Preference number: 4 (lower is better)
Translates to: DAQDLLSHQNPLYPADGQHPVLL*LLATVG
Trigger: TCCTACTGTGGCCAGGAGGCAGAGCAAGACAGGGTG...TTGCCCATCTGCTGGGTAAAGTGGATTCTGGTGACTAAGTAAATCTTGTGCGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR CCA 90 bp AACCACAAAATTCAAGTAACAGTCACTGTGCGGTGTTCTGGTTTGGAGCTGTGCAGCATCCCCAAACACTaGCTCCGGAGACTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: NHKIQVTVTVRCSGLELCSIPKH*LRRLPF
Trigger: GAAGGGCAGTCTCCGGAGCCAGTGTTTGGGGATGCT...GCACAGCTCCAAACCAGAACACCGCACAGTGACTGTTACTTGAATTTTGTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR CAA 72 bp AGTGACCTCCTGAGGACAGAAAGGTCAGGGAATGTGTaGTTTCAGGGATCCAAAAAGGCCCTGAGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: SDLLRTERSGNV*FQGSKKALRRP
Trigger: TGGCCTTCTCAGGGCCTTTTTGGATCCCTGAAACAACACATTCCCTGACCTTTCTGTCCTCAGGAGGTCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR CAA 72 bp TTCTTCTTAATTCGGGAGTACTGCCGCTTCAGGGCGTaGATGTCCGTGGTCATCCGCTCCATCATCATACTG +
Preference number: 4 (lower is better)
Translates to: FFLIREYCRFRA*MSVVIRSIIIL
Trigger: CAGTATGATGATGGAGCGGATGACCACGGACATCAACGCCCTGAAGCGGCAGTACTCCCGAATTAAGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
3UTR CAA 72 bp GTCTGCCCTTATGTACACCTGATGGAGCTGCTGCTGTaGCTTCTTCTTAATTCGGGAGTACTGCCGCTTCAG +
Preference number: 4 (lower is better)
Translates to: VCPYVHLMELLL*LLLNSGVLPLQ
Trigger: CTGAAGCGGCAGTACTCCCGAATTAAGAAGAAGCAACAGCAGCAGCTCCATCAGGTGTACATAAGGGCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
CDS-3UTR TCA 90 bp GAGATACTAAGAGAACAGTTGATAGACAACCCCACCCAATTATCCATCTCTCCCAAGCCCCTGCTCATCTaGGGGAAGTGCACGTTTGGG +
Preference number: 4 (lower is better)
Translates to: EILREQLIDNPTQLSISPKPLLI*GKCTFG
Trigger: CCCAAACGTGCACTTCCCTCAGATGAGCAGGGGCTT...GGGAGAGATGGATAATTGGGTGGGGTTGTCTATCAACTGTTCTCTTAGTATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR GCA 90 bp GTTTGGATGGGGCTGATGGTGCTCAGCTCTGAACCTCTCAGTTCATTCTTATTGCTTTTCCCTCAACTCTaGCAACTGCGGGAACGGGAA +
Preference number: 4 (lower is better)
Translates to: VWMGLMVLSSEPLSSFLLLFPQL*QLRERE
Trigger: TTCCCGTTCCCGCAGTTGGCAGAGTTGAGGGAAAAG...CAATAAGAATGAACTGAGAGGTTCAGAGCTGAGCACCATCAGCCCCATCCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR GCA 90 bp CTTGGTGGAGAGAGAACCATTTTCTCTTCAAGTCAGTCATGGGGTGTGTGTGTGCACGGGAGAACTATTTaGCTGCGATGGGAGGATGCT +
Preference number: 4 (lower is better)
Translates to: LGGERTIFSSSQSWGVCVHGRTI*LRWEDA
Trigger: AGCATCCTCCCATCGCAGGCAAATAGTTCTCCCGTG...CACACACACACCCCATGACTGACTTGAAGAGAAAATGGTTCTCTCTCCACCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR GCA 90 bp GAAACGAAGGTAAAGATATCACTGTATTCTGCTAATGATGGTGGAGACGGAGTGACTGGCTCCGGAGACTaGCCTTCGATCGTCCTCGGA +
Preference number: 4 (lower is better)
Translates to: ETKVKISLYSANDGGDGVTGSGD*PSIVLG
Trigger: TCCGAGGACGATCGAAGGGCAGTCTCCGGAGCCAGT...CACTCCGTCTCCACCATCATTAGCAGAATACAGTGATATCTTTACCTTCGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR CCA 90 bp ACGTATGATCTCTCCCTCCCTGCGTTCCTCCCTCTGGCCGCTTCTATTCAGGAGTTTTGTCCCAGTCGATaGCTATACTGTGCAGATAAT +
Preference number: 4 (lower is better)
Translates to: TYDLSLPAFLPLAASIQEFCPSR*LYCADN
Trigger: ATTATCTGCACAGTATAGCCATCGACTGGGACAAAA...CTCCTGAATAGAAGCGGCCAGAGGGAGGAACGCAGGGAGGGAGAGATCATACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR CCA 90 bp GAACTAGACAAAAGAGAGAGAGAGAGAGAACATTGTTCCAAACAGTTACAGCCATGCTCCAGCATCTCCTaGGTGAGGCGCCCCATGGTG +
Preference number: 4 (lower is better)
Translates to: ELDKREREREHCSKQLQPCSSIS*VRRPMV
Trigger: CACCATGGGGCGCCTCACCCAGGAGATGCTGGAGCA...TGGCTGTAACTGTTTGGAACAATGTTCTCTCTCTCTCTCTCTTTTGTCTAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR CCA 90 bp GTTTGGATGGGGCTGATGGTGCTCAGCTCTGAACCTCTCAGTTCATTCTTATTGCATCGTCACTATCTCTaGCCTTACTGTGTCGCCCAG +
Preference number: 4 (lower is better)
Translates to: VWMGLMVLSSEPLSSFLLHRHYL*PYCVAQ
Trigger: CTGGGCGACACAGTAAGGCCAGAGATAGTGACGATG...CAATAAGAATGAACTGAGAGGTTCAGAGCTGAGCACCATCAGCCCCATCCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR CCA 90 bp AACCACAAAATTCAAGTAACAGTCACTGTGCGGTGTTCTGGTTTGGAGCTGTGCATTTTCCCTCCTGGGTaGCCTGGCACGTGGATCACT +
Preference number: 4 (lower is better)
Translates to: NHKIQVTVTVRCSGLELCIFPPG*PGTWIT
Trigger: AGTGATCCACGTGCCAGGCCACCCAGGAGGGAAAAT...GCACAGCTCCAAACCAGAACACCGCACAGTGACTGTTACTTGAATTTTGTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR CCA 90 bp AACCACAAAATTCAAGTAACAGTCACTGTGCGGTGTTCTGGTTTGGAGCTGTGCAGGGAAGTGCACGTTTaGGGTTCTTTCTGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: NHKIQVTVTVRCSGLELCREVHV*GSFCGA
Trigger: GGCCCCACAGAAAGAACCCCAAACGTGCACTTCCCT...GCACAGCTCCAAACCAGAACACCGCACAGTGACTGTTACTTGAATTTTGTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR CAA 72 bp TTGATGTCCGTGGTCATCCGCTCCATCATCATACTGTaGAACGCTGCATGGTACTCACTCCGACAGGAATTG +
Preference number: 4 (lower is better)
Translates to: LMSVVIRSIIIL*NAAWYSLRQEL
Trigger: CAATTCCTGTCGGAGTGAGTACCATGCAGCGTTCAACAGTATGATGATGGAGCGGATGACCACGGACATCAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218111.2
CDS-3UTR TCA 90 bp TTTCTTAAGATATTGGGGGACGAGATACTAAGAGAACAGTTGATAGACAACCCCGGGCAGCCAGGATGTTaGAGCCTTGGCAGTACCCGA +
Preference number: 4 (lower is better)
Translates to: FLKILGDEILREQLIDNPGQPGC*SLGSTR
Trigger: TCGGGTACTGCCAAGGCTTCAACATCCTGGCTGCCC...GGGGTTGTCTATCAACTGTTCTCTTAGTATCTCGTCCCCCAATATCTTAAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR GCA 90 bp CACACACACAAAAATATTCTTCCAGCTATTCGTTCAACCAATACTCGGCCCATAGCGCGTCCCCCTCGTTaGCCTCCATCACTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: HTHKNILPAIRSTNTRPIARPPR*PPSLPE
Trigger: TTCTGGAAGTGATGGAGGGCAACGAGGGGGACGCGC...TATGGGCCGAGTATTGGTTGAACGAATAGCTGGAAGAATATTTTTGTGTGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR GCA 90 bp GTTTGGATGGGGCTGATGGTGCTCAGCTCTGAACCTCTCAGTTCATTCTTATTGTGGCACGTGGATCACTaGATTCTTGGCTGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: VWMGLMVLSSEPLSSFLLWHVDH*ILGCSV
Trigger: AACAGAGCAGCCAAGAATGCAGTGATCCACGTGCCA...CAATAAGAATGAACTGAGAGGTTCAGAGCTGAGCACCATCAGCCCCATCCAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR CAA 72 bp ATGGTGCTCAGCTCTGAACCTCTCAGTTCATTCTTATaGGACAAAAGAAACAGGAAGGGCGTAGCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: MVLSSEPLSSFL*DKRNRKGVACH
Trigger: GTGGCAGGCTACGCCCTTCCTGTTTCTTTTGTCCAATAAGAATGAACTGAGAGGTTCAGAGCTGAGCACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064107.7
ENSMUST00000218111.2
CDS-3UTR GCA 90 bp GCACGGACAAAGAGCAATAGACCAGCTTGTCGTAGAAGAAACACTGGATTATTTCTCTGTAGCAGATCCTaGTCCAGCATCTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: ARTKSNRPACRRRNTGLFLCSRS*SSISWV
Trigger: CACCCAGGAGATGCTGGAGCAGGATCTGCTACAGAG...AAATAATCCAGTGTTTCTTCTACGACAAGCTGGTCTATTGCTCTTTGTCCGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR TCA 90 bp CGGCTCTTTCTTAAGATATTGGGGGACGAGATACTAAGAGAACAGTTGATAGACTTCCCGGGAGAAGTTTaGTGGCAGTCTGGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: RLFLKILGDEILREQLIDFPGEV*WQSGFL
Trigger: GAGAAAACCAGACTGCCATCAAACTTCTCCCGGGAA...GTCTATCAACTGTTCTCTTAGTATCTCGTCCCCCAATATCTTAAGAAAGAGCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR GCA 90 bp AAAGAGAGAGAGAGAGAGAACATTGTTCCAAACAGTTACAGCCATAGATCGACAATCGCTTCTTGGTGCTaGTGTTCCCAATGCCGGACT +
Preference number: 4 (lower is better)
Translates to: KERERENIVPNSYSHRSTIASWC*CSQCRT
Trigger: AGTCCGGCATTGGGAACAGCAGCACCAAGAAGCGAT...TGTCGATCTATGGCTGTAACTGTTTGGAACAATGTTCTCTCTCTCTCTCTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
3UTR CAA 72 bp GAATTAGGAGGCTGTGTATTAAATGGCTTCCTAGTCTaGGCTCATACAAGCTCTGTAGTCAGTCAGTGCGCA +
Preference number: 4 (lower is better)
Translates to: ELGGCVLNGFLV*AHTSSVVSQCA
Trigger: TGCGCACTGACTGACTACAGAGCTTGTATGAGCCAAGACTAGGAAGCCATTTAATACACAGCCTCCTAATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR TCA 90 bp TTTCTTAAGATATTGGGGGACGAGATACTAAGAGAACAGTTGATAGACAACCCCGTGCCCGGAGATTATTaGCAAAGTAGCTTTCGGGGA +
Preference number: 4 (lower is better)
Translates to: FLKILGDEILREQLIDNPVPGDY*QSSFRG
Trigger: TCCCCGAAAGCTACTTTGTCAATAATCTCCGGGCAC...GGGGTTGTCTATCAACTGTTCTCTTAGTATCTCGTCCCCCAATATCTTAAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR TCA 90 bp GCACGGACAAAGAGCAATAGACCAGCTTGTCGTAGAAGAAACACTGGATTATTTGTCTCAAGAGATCTCTaGAGACAGCCATATCCACAG +
Preference number: 4 (lower is better)
Translates to: ARTKSNRPACRRRNTGLFVSRDL*RQPYPQ
Trigger: CTGTGGATATGGCTGTCTTCAGAGATCTCTTGAGAC...AAATAATCCAGTGTTTCTTCTACGACAAGCTGGTCTATTGCTCTTTGTCCGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR GCA 90 bp GAAACGAAGGTAAAGATATCACTGTATTCTGCTAATGATGGTGGAGACGGAGTGTGGAGCTGCTGCTGTTaGTTCTTCTTAATTCGGGAG +
Preference number: 4 (lower is better)
Translates to: ETKVKISLYSANDGGDGVWSCCC*FFLIRE
Trigger: CTCCCGAATTAAGAAGAAGCAACAGCAGCAGCTCCA...CACTCCGTCTCCACCATCATTAGCAGAATACAGTGATATCTTTACCTTCGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR TCA 90 bp CGGCTCTTTCTTAAGATATTGGGGGACGAGATACTAAGAGAACAGTTGATAGACAGATCCTTGACGATTTaGATTCCCATGGAGTCGTCA +
Preference number: 4 (lower is better)
Translates to: RLFLKILGDEILREQLIDRSLTI*IPMESS
Trigger: TGACGACTCCATGGGAATTCAAATCGTCAAGGATCT...GTCTATCAACTGTTCTCTTAGTATCTCGTCCCCCAATATCTTAAGAAAGAGCCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR GCA 90 bp CGGCTCTTTCTTAAGATATTGGGGGACGAGATACTAAGAGAACAGTTGATAGACGCCGTAGAATTCGTCTaGTGTCTCGCAACATTCTAT +
Preference number: 4 (lower is better)
Translates to: RLFLKILGDEILREQLIDAVEFV*CLATFY
Trigger: ATAGAATGTTGCGAGACAGCAGACGAATTCTACGGC...GTCTATCAACTGTTCTCTTAGTATCTCGTCCCCCAATATCTTAAGAAAGAGCCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR GCA 90 bp ATAAAAGAAATTCTCTTCTTGTGCTTAACTTTGGGAAACAGTGGGTCTCATCATCATCACCATCACCGCTaGTGCCTTCACTGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: IKEILFLCLTLGNSGSHHHHHHR*CLHCEL
Trigger: CAGCTCACAGTGAAGGCAGCAGCGGTGATGGTGATG...ATGATGAGACCCACTGTTTCCCAAAGTTAAGCACAAGAAGAGAATTTCTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR CCA 90 bp GCACGGACAAAGAGCAATAGACCAGCTTGTCGTAGAAGAAACACTGGATTATTTAGCCTAGATGACTCTTaGTCCTCGGCATGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: ARTKSNRPACRRRNTGLFSLDDS*SSACSF
Trigger: AAAAGAACATGCCGAGGACCAAGAGTCATCTAGGCT...AAATAATCCAGTGTTTCTTCTACGACAAGCTGGTCTATTGCTCTTTGTCCGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR CCA 90 bp CACGGACAAAGAGCAATAGACCAGCTTGTCGTAGAAGAAACACTGGATTATTTATTGGGGTTCTTTCTGTaGGGCCATATAACCCCAAAT +
Preference number: 4 (lower is better)
Translates to: HGQRAIDQLVVEETLDYLLGFFL*GHITPN
Trigger: ATTTGGGGTTATATGGCCCCACAGAAAGAACCCCAA...TAAATAATCCAGTGTTTCTTCTACGACAAGCTGGTCTATTGCTCTTTGTCCGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR CCA 90 bp ATAAAAGAAATTCTCTTCTTGTGCTTAACTTTGGGAAACAGTGGGTCTCATCATGTCTGCATGAGTTCATaGCTCTGTAGCAGATCCTGC +
Preference number: 4 (lower is better)
Translates to: IKEILFLCLTLGNSGSHHVCMSS*LCSRSC
Trigger: GCAGGATCTGCTACAGAGCCATGAACTCATGCAGAC...ATGATGAGACCCACTGTTTCCCAAAGTTAAGCACAAGAAGAGAATTTCTTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR GCA 90 bp GAACTAGACAAAAGAGAGAGAGAGAGAGAACATTGTTCCAAACAGTTACAGCCAGTCGCTTCTTTAATCTaGTTTTGGTACTTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: ELDKREREREHCSKQLQPVASLI*FWYFCS
Trigger: ACTGCAGAAGTACCAAAAGCAGATTAAAGAAGCGAC...TGGCTGTAACTGTTTGGAACAATGTTCTCTCTCTCTCTCTCTTTTGTCTAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR CCA 90 bp CACACACACAAAAATATTCTTCCAGCTATTCGTTCAACCAATACTCGGCCCATATCTTTAATCTGCTTTTaGTACTTCTGCAGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: HTHKNILPAIRSTNTRPISLICF*YFCSSG
Trigger: ACCTGAACTGCAGAAGTACCAAAAGCAGATTAAAGA...TATGGGCCGAGTATTGGTTGAACGAATAGCTGGAAGAATATTTTTGTGTGTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR TCA 90 bp ATAAAAGAAATTCTCTTCTTGTGCTTAACTTTGGGAAACAGTGGGTCTCATCATTGGCTGGAAACGGTGTaGTGTTATAGGTATACTTTT +
Preference number: 4 (lower is better)
Translates to: IKEILFLCLTLGNSGSHHWLETV*CYRYTF
Trigger: AAAAGTATACCTATAACATCACACCGTTTCCAGCCA...ATGATGAGACCCACTGTTTCCCAAAGTTAAGCACAAGAAGAGAATTTCTTTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS GCA 90 bp GTCCCTTCGCAGGGGGCGGCCCTGGGACGCACGGTCCCCGCCGGCTaGCACCTCCTCCTCCTCGGTGCAGCTGTAGAGCTCGGTGAGCAA +
Preference number: 5 (lower is better)
Translates to: VPSQGAALGRTVPAG*HLLLLGAAVELGEQ
Trigger: TTGCTCACCGAGCTCTACAGCTGCACCGAGGAGGAGGAGGTGGCAGCCGGCGGGGACCGTGCGTCCCAGGGCCGCCCCCTGCGAAGGGAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000219179.2
CDS GCA 90 bp CTCCTGCAGCACTCGGGAGTCGCCAGCGCCGCGGCCGCCCAGGAATaGGTCGGAACCCGAGGTCTCGGTGGAGCTGTCCAGGCTGTCCCT +
Preference number: 5 (lower is better)
Translates to: LLQHSGVASAAAAQE*VGTRGLGGAVQAVP
Trigger: AGGGACAGCCTGGACAGCTCCACCGAGACCTCGGGTTCCGACGCATTCCTGGGCGGCCGCGGCGCTGGCGACTCCCGAGTGCTGCAGGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219179.2
CDS TCA 90 bp GCACATTGCTCAGGATGGTGCCCACGCCACCGCCGCCCTGGCGCTTaGGGCATCGCCCGCCGCGACGCAGGGAGCCGGTCAGTTTGTCTT +
Preference number: 5 (lower is better)
Translates to: AHCSGWCPRHRRPGA*GIARRDAGSRSVCL
Trigger: AAGACAAACTGACCGGCTCCCTGCGTCGCGGCGGGCGATGCCTCAAGCGCCAGGGCGGCGGTGGCGTGGGCACCATCCTGAGCAATGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS CCA 90 bp TTCTTGAGCACATTGCTCAGGATGGTGCCCACGCCACCGCCGCCCTaGCGCTTGAGGCATCGCCCGCCGCGACGCAGGGAGCCGGTCAGT +
Preference number: 5 (lower is better)
Translates to: FLSTLLRMVPTPPPP*RLRHRPPRRREPVS
Trigger: ACTGACCGGCTCCCTGCGTCGCGGCGGGCGATGCCTCAAGCGCCAGGGCGGCGGTGGCGTGGGCACCATCCTGAGCAATGTGCTCAAGAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS GCA 90 bp ACCGTGTGGTTCGGGAGGCACGTGGCAAAGAGCGTGAGGAACCACTaGATTGTGAAGACGTTGGTGAGCGGGGGCTCGTATCCGCCTCCG +
Preference number: 5 (lower is better)
Translates to: TVWFGRHVAKSVRNH*IVKTLVSGGSYPPP
Trigger: CGGAGGCGGATACGAGCCCCCGCTCACCAACGTCTTCACAATGCAGTGGTTCCTCACGCTCTTTGCCACGTGCCTCCCGAACCACACGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS GCA 90 bp TTCAGCTCTCGAAGAACGGTCTTCAGCTCACTGGAGTCTTTCCGCTaGAGGTACTGCATCTGGAGCCGCAGGCTCGGGCGCTCCCGCAGC +
Preference number: 5 (lower is better)
Translates to: FSSRRTVFSSLESFR*RYCIWSRRLGRSRS
Trigger: GCTGCGGGAGCGCCCGAGCCTGCGGCTCCAGATGCAGTACCTGCAGCGGAAAGACTCCAGTGAGCTGAAGACCGTTCTTCGAGAGCTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219179.2
CDS GCA 90 bp CAGCATCTCCTGGGTGAGGCGCCCCATGGTGCCGTAGAATTCGTCTaGTGTCTCGCAACATTCTATCTGCTCTCCCAGCTTTGCCCAGAT +
Preference number: 5 (lower is better)
Translates to: QHLLGEAPHGAVEFV*CLATFYLLSQLCPD
Trigger: ATCTGGGCAAAGCTGGGAGAGCAGATAGAATGTTGCGAGACAGCAGACGAATTCTACGGCACCATGGGGCGCCTCACCCAGGAGATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS CCA 90 bp TGCCAATCCTGTACTTCAGCTCTCGAAGAACGGTCTTCAGCTCACTaGAGTCTTTCCGCTGCAGGTACTGCATCTGGAGCCGCAGGCTCG +
Preference number: 5 (lower is better)
Translates to: CQSCTSALEERSSAH*SLSAAGTASGAAGS
Trigger: CGAGCCTGCGGCTCCAGATGCAGTACCTGCAGCGGAAAGACTCCAGTGAGCTGAAGACCGTTCTTCGAGAGCTGAAGTACAGGATTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219179.2
CDS-3UTR CAA 90 bp ACACCATATACGTATGATCTCTCCCTCCCTGCGTTCCTCCCTCTGGCCGCTTCTCCTTTGGTATCCCCGTaGACAGTCTGGCCACAGCCT +
Preference number: 5 (lower is better)
Translates to: TPYTYDLSLPAFLPLAASPLVSP*TVWPQP
Trigger: AGGCTGTGGCCAGACTGTCAACGGGGATACCAAAGG...AGAAGCGGCCAGAGGGAGGAACGCAGGGAGGGAGAGATCATACGTATATGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR CAA 90 bp GTTCTTCCGGTGTTTGCATACAGTGTCCGACACGTGGGGAAGATGGACAGTCACAGGGCAGCCAGGATGTaGAAGCCTTGGCAGTACCCG +
Preference number: 5 (lower is better)
Translates to: VLPVFAYSVRHVGKMDSHRAARM*KPWQYP
Trigger: CGGGTACTGCCAAGGCTTCAACATCCTGGCTGCCCT...GTGACTGTCCATCTTCCCCACGTGTCGGACACTGTATGCAAACACCGGAAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR CAA 90 bp GTTCTTCCGGTGTTTGCATACAGTGTCCGACACGTGGGGAAGATGGACAGTCACTCTGCTCTCCCAGCTTaGCCCAGATGGCCAGCGACA +
Preference number: 5 (lower is better)
Translates to: VLPVFAYSVRHVGKMDSHSALPA*PRWPAT
Trigger: TGTCGCTGGCCATCTGGGCAAAGCTGGGAGAGCAGA...GTGACTGTCCATCTTCCCCACGTGTCGGACACTGTATGCAAACACCGGAAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS TCA 90 bp TCCCAGCTTTGCCCAGATGGCCAGCGACACCCTCAGGATGATCTCTaGACCTTCGAAGAACACGGAGTCCCAGATCTTCAGAACCGTGTG +
Preference number: 5 (lower is better)
Translates to: SQLCPDGQRHPQDDL*TFEEHGVPDLQNRV
Trigger: CACACGGTTCTGAAGATCTGGGACTCCGTGTTCTTCGAAGGTTCAGAGATCATCCTGAGGGTGTCGCTGGCCATCTGGGCAAAGCTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR CAA 90 bp AATCCACTTTACCCAGCAGATGGGCAAAGGTCCCATCTGGTCCCCACCATGGAATCACTCCGACAGGAATaGATGGCTCCTGGGCTCAGC +
Preference number: 5 (lower is better)
Translates to: NPLYPADGQRSHLVPTMESLRQE*MAPGLS
Trigger: GCTGAGCCCAGGAGCCATCAATTCCTGTCGGAGTGA...TTCCATGGTGGGGACCAGATGGGACCTTTGCCCATCTGCTGGGTAAAGTGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR CAA 90 bp ACAGTCACTGTGCGGTGTTCTGGTTTGGAGCTGTGCATCTGCAGTGGAGAGAGATGCCGCGGCATCCCTTaGGTTCAGTTCCAAGGCTTC +
Preference number: 5 (lower is better)
Translates to: TVTVRCSGLELCICSGERCRGIP*VQFQGF
Trigger: GAAGCCTTGGAACTGAACCAAAGGGATGCCGCGGCA...TCTCTCTCCACTGCAGATGCACAGCTCCAAACCAGAACACCGCACAGTGACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS TCA 90 bp TCTGCTCTCCCAGCTTTGCCCAGATGGCCAGCGACACCCTCAGGATaGTCTCTGAACCTTCGAAGAACACGGAGTCCCAGATCTTCAGAA +
Preference number: 5 (lower is better)
Translates to: SALPALPRWPATPSG*SLNLRRTRSPRSSE
Trigger: TTCTGAAGATCTGGGACTCCGTGTTCTTCGAAGGTTCAGAGATCATCCTGAGGGTGTCGCTGGCCATCTGGGCAAAGCTGGGAGAGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS CCA 90 bp TCTGAACCTTCGAAGAACACGGAGTCCCAGATCTTCAGAACCGTGTaGTTCGGGAGGCACGTGGCAAAGAGCGTGAGGAACCACTGCATT +
Preference number: 5 (lower is better)
Translates to: SEPSKNTESQIFRTV*FGRHVAKSVRNHCI
Trigger: AATGCAGTGGTTCCTCACGCTCTTTGCCACGTGCCTCCCGAACCACACGGTTCTGAAGATCTGGGACTCCGTGTTCTTCGAAGGTTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR CAA 90 bp ACGTATGATCTCTCCCTCCCTGCGTTCCTCCCTCTGGCCGCTTCTATTCAGGAGTTCTCCTCCATTCCTTaGGTATCCCCGTTGACAGTC +
Preference number: 5 (lower is better)
Translates to: TYDLSLPAFLPLAASIQEFSSIP*VSPLTV
Trigger: GACTGTCAACGGGGATACCAAAGGAATGGAGGAGAA...CTCCTGAATAGAAGCGGCCAGAGGGAGGAACGCAGGGAGGGAGAGATCATACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS GCA 90 bp GCCTGTCTTTCTGCTTCAGCTGCCGGAGTAACTTTGCGGACTGGATaGCAATCCTGTACTTCAGCTCTCGAAGAACGGTCTTCAGCTCAC +
Preference number: 5 (lower is better)
Translates to: ACLSASAAGVTLRTG*QSCTSALEERSSAH
Trigger: GTGAGCTGAAGACCGTTCTTCGAGAGCTGAAGTACAGGATTGGCATCCAGTCCGCAAAGTTACTCCGGCAGCTGAAGCAGAAAGACAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219179.2
CDS CCA 90 bp AGAAGCCTGTCTTTCTGCTTCAGCTGCCGGAGTAACTTTGCGGACTaGATGCCAATCCTGTACTTCAGCTCTCGAAGAACGGTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: RSLSFCFSCRSNFAD*MPILYFSSRRTVFS
Trigger: GCTGAAGACCGTTCTTCGAGAGCTGAAGTACAGGATTGGCATCCAGTCCGCAAAGTTACTCCGGCAGCTGAAGCAGAAAGACAGGCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219179.2
CDS-3UTR CAA 90 bp GAACATGGGGGAAAGAGGGCCTTCTCCAGAGAAAGGCAGTGTTCAAGTAACAAACGCTTCTTGAGCACATaGCTCAGGATGGTGCCCACG +
Preference number: 5 (lower is better)
Translates to: EHGGKRAFSRERQCSSNKRFLST*LRMVPT
Trigger: CGTGGGCACCATCCTGAGCAATGTGCTCAAGAAGCG...TTTGTTACTTGAACACTGCCTTTCTCTGGAGAAGGCCCTCTTTCCCCCATGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR CAA 90 bp AGAAGGCCAGAAGAGGGCTTAACAGTCTACAGGTTGTCTTTTCTAAAGAGCTCAAGCGCGTCCCCCTCGTaGCCCTCCATCACTTCCAGA +
Preference number: 5 (lower is better)
Translates to: RRPEEGLTVYRLSFLKSSSASPS*PSITSR
Trigger: TCTGGAAGTGATGGAGGGCAACGAGGGGGACGCGCT...TGAGCTCTTTAGAAAAGACAACCTGTAGACTGTTAAGCCCTCTTCTGGCCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS TCA 90 bp TGTGACACAGCCTGCAGGCACGCTGTCACAATGTCACAGTTCTTCTaGACTTTATGCAGAAGCCTGTCTTTCTGCTTCAGCTGCCGGAGT +
Preference number: 5 (lower is better)
Translates to: CDTACRHAVTMSQFF*TLCRSLSFCFSCRS
Trigger: ACTCCGGCAGCTGAAGCAGAAAGACAGGCTTCTGCATAAAGTTCAGAAGAACTGTGACATTGTGACAGCGTGCCTGCAGGCTGTGTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219179.2
CDS-3UTR CAA 90 bp CTTTACCCAGCAGATGGGCAAAGGTCCCATCTGGTCCCCACCATGGAACTTCCATCCATCATCATACTGTaGAACGCTGCATGGTACTCA +
Preference number: 5 (lower is better)
Translates to: LYPADGQRSHLVPTMELPSIIIL*NAAWYS
Trigger: TGAGTACCATGCAGCGTTCAACAGTATGATGATGGA...TGGAAGTTCCATGGTGGGGACCAGATGGGACCTTTGCCCATCTGCTGGGTAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR CAA 90 bp GCACGGACAAAGAGCAATAGACCAGCTTGTCGTAGAAGAAACACTGGATTATTTTGCCGCTTCAGGGCGTaGATGTCCGTGGTCATCCGC +
Preference number: 5 (lower is better)
Translates to: ARTKSNRPACRRRNTGLFCRFRA*MSVVIR
Trigger: GCGGATGACCACGGACATCAACGCCCTGAAGCGGCA...AAATAATCCAGTGTTTCTTCTACGACAAGCTGGTCTATTGCTCTTTGTCCGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS TCA 90 bp CAAGGTCAACCAAACCTTTCTCCTCCATTCCTTTGGTATCCCCGTTaGCAGTCTGGCCACAGCCTTGAGAGCATCATACCACTGCTGAAA +
Preference number: 5 (lower is better)
Translates to: QGQPNLSPPFLWYPR*QSGHSLESIIPLLK
Trigger: TTTCAGCAGTGGTATGATGCTCTCAAGGCTGTGGCCAGACTGTCAACGGGGATACCAAAGGAATGGAGGAGAAAGGTTTGGTTGACCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064107.7
ENSMUST00000219179.2
CDS-3UTR CAA 90 bp AATCCACTTTACCCAGCAGATGGGCAAAGGTCCCATCTGGTCCCCACCATGGAAGGGTTGCTTCTCTCATaGAAAGTGAAACGCATGGTT +
Preference number: 5 (lower is better)
Translates to: NPLYPADGQRSHLVPTMEGLLLS*KVKRMV
Trigger: AACCATGCGTTTCACTTTCAATGAGAGAAGCAACCC...TTCCATGGTGGGGACCAGATGGGACCTTTGCCCATCTGCTGGGTAAAGTGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS GCA 90 bp CTTCAGTCTCAAGAGATCTCTGAAGACAGCCATATCCACAGACAGTaGCCGGAGATTATTGACAAAGTAGCTTTCGGGGAGTACCTTATC +
Preference number: 5 (lower is better)
Translates to: LQSQEISEDSHIHRQ*PEIIDKVAFGEYLI
Trigger: GATAAGGTACTCCCCGAAAGCTACTTTGTCAATAATCTCCGGGCACTGTCTGTGGATATGGCTGTCTTCAGAGATCTCTTGAGACTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR CAA 90 bp GAACATGGGGGAAAGAGGGCCTTCTCCAGAGAAAGGCAGTGTTCAAGTAACAAACTGCTGAAAACCATTTaGACCCAAAGAAGGCTCAAG +
Preference number: 5 (lower is better)
Translates to: EHGGKRAFSRERQCSSNKLLKTI*TQRRLK
Trigger: CTTGAGCCTTCTTTGGGTCAAAATGGTTTTCAGCAG...TTTGTTACTTGAACACTGCCTTTCTCTGGAGAAGGCCCTCTTTCCCCCATGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR CAA 90 bp CGGCTCTTTCTTAAGATATTGGGGGACGAGATACTAAGAGAACAGTTGATAGACCAGATCCTTGACGATTaGAATTCCCATGGAGTCGTC +
Preference number: 5 (lower is better)
Translates to: RLFLKILGDEILREQLIDQILDD*NSHGVV
Trigger: GACGACTCCATGGGAATTCAAATCGTCAAGGATCTG...GTCTATCAACTGTTCTCTTAGTATCTCGTCCCCCAATATCTTAAGAAAGAGCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS-3UTR CAA 90 bp CTTGGTGGAGAGAGAACCATTTTCTCTTCAAGTCAGTCATGGGGTGTGTGTGTGTTCTTTAATCTGCTTTaGGTACTTCTGCAGTTCAGG +
Preference number: 5 (lower is better)
Translates to: LGGERTIFSSSQSWGVCVFFNLL*VLLQFR
Trigger: CCTGAACTGCAGAAGTACCAAAAGCAGATTAAAGAA...CACACACACACCCCATGACTGACTTGAAGAGAAAATGGTTCTCTCTCCACCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS CCA 72 bp GAGCTGTCCAGGCTGTCCCTTCGCAGGGGGCGGCCCTaGGACGCACGGTCCCCGCCGGCTGCCACCTCCTCC +
Preference number: 6 (lower is better)
Translates to: ELSRLSLRRGRP*DARSPPAATSS
Trigger: GGAGGAGGTGGCAGCCGGCGGGGACCGTGCGTCCCAGGGCCGCCCCCTGCGAAGGGACAGCCTGGACAGCTC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000219179.2
CDS CAA 72 bp CTCAGGATGGTGCCCACGCCACCGCCGCCCTGGCGCTaGAGGCATCGCCCGCCGCGACGCAGGGAGCCGGTC +
Preference number: 6 (lower is better)
Translates to: LRMVPTPPPPWR*RHRPPRRREPV
Trigger: GACCGGCTCCCTGCGTCGCGGCGGGCGATGCCTCAAGCGCCAGGGCGGCGGTGGCGTGGGCACCATCCTGAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS TCA 72 bp TCAGGATGGTGCCCACGCCACCGCCGCCCTGGCGCTTaGGGCATCGCCCGCCGCGACGCAGGGAGCCGGTCA +
Preference number: 6 (lower is better)
Translates to: SGWCPRHRRPGA*GIARRDAGSRS
Trigger: TGACCGGCTCCCTGCGTCGCGGCGGGCGATGCCTCAAGCGCCAGGGCGGCGGTGGCGTGGGCACCATCCTGA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS GCA 72 bp CAGGGGGCGGCCCTGGGACGCACGGTCCCCGCCGGCTaGCACCTCCTCCTCCTCGGTGCAGCTGTAGAGCTC +
Preference number: 6 (lower is better)
Translates to: QGAALGRTVPAG*HLLLLGAAVEL
Trigger: GAGCTCTACAGCTGCACCGAGGAGGAGGAGGTGGCAGCCGGCGGGGACCGTGCGTCCCAGGGCCGCCCCCTG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000219179.2
CDS GCA 72 bp CACTCGGGAGTCGCCAGCGCCGCGGCCGCCCAGGAATaGGTCGGAACCCGAGGTCTCGGTGGAGCTGTCCAG +
Preference number: 6 (lower is better)
Translates to: HSGVASAAAAQE*VGTRGLGGAVQ
Trigger: CTGGACAGCTCCACCGAGACCTCGGGTTCCGACGCATTCCTGGGCGGCCGCGGCGCTGGCGACTCCCGAGTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219179.2
CDS CCA 72 bp ACATTGCTCAGGATGGTGCCCACGCCACCGCCGCCCTaGCGCTTGAGGCATCGCCCGCCGCGACGCAGGGAG +
Preference number: 6 (lower is better)
Translates to: TLLRMVPTPPPP*RLRHRPPRRRE
Trigger: CTCCCTGCGTCGCGGCGGGCGATGCCTCAAGCGCCAGGGCGGCGGTGGCGTGGGCACCATCCTGAGCAATGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS CAA 90 bp AGCACATTGCTCAGGATGGTGCCCACGCCACCGCCGCCCTGGCGCTaGAGGCATCGCCCGCCGCGACGCAGGGAGCCGGTCAGTTTGTCT +
Preference number: 6 (lower is better)
Translates to: STLLRMVPTPPPPWR*RHRPPRRREPVSLS
Trigger: AGACAAACTGACCGGCTCCCTGCGTCGCGGCGGGCGATGCCTCAAGCGCCAGGGCGGCGGTGGCGTGGGCACCATCCTGAGCAATGTGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS CAA 90 bp AACCGGGGCGCGGTCCGCGAGATGCAGCTGCGCTTCTTGAGCACATaGCTCAGGATGGTGCCCACGCCACCGCCGCCCTGGCGCTTGAGG +
Preference number: 6 (lower is better)
Translates to: NRGAVREMQLRFLST*LRMVPTPPPPWRLR
Trigger: CCTCAAGCGCCAGGGCGGCGGTGGCGTGGGCACCATCCTGAGCAATGTGCTCAAGAAGCGCAGCTGCATCTCGCGGACCGCGCCCCGGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS CAA 90 bp GTGCAGAGCAACCGGGGCGCGGTCCGCGAGATGCAGCTGCGCTTCTaGAGCACATTGCTCAGGATGGTGCCCACGCCACCGCCGCCCTGG +
Preference number: 6 (lower is better)
Translates to: VQSNRGAVREMQLRF*STLLRMVPTPPPPW
Trigger: CCAGGGCGGCGGTGGCGTGGGCACCATCCTGAGCAATGTGCTCAAGAAGCGCAGCTGCATCTCGCGGACCGCGCCCCGGTTGCTCTGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS TCA 72 bp CCACCTCCTCCTCCTCGGTGCAGCTGTAGAGCTCGGTaGGCAACCCGCTCACTAGGGACGCCGTGCGGCTCG +
Preference number: 6 (lower is better)
Translates to: PPPPPRCSCRAR*ATRSLGTPCGS
Trigger: CGAGCCGCACGGCGTCCCTAGTGAGCGGGTTGCTCACCGAGCTCTACAGCTGCACCGAGGAGGAGGAGGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219179.2
CDS CAA 72 bp GCGGTCCGCGAGATGCAGCTGCGCTTCTTGAGCACATaGCTCAGGATGGTGCCCACGCCACCGCCGCCCTGG +
Preference number: 6 (lower is better)
Translates to: AVREMQLRFLST*LRMVPTPPPPW
Trigger: CCAGGGCGGCGGTGGCGTGGGCACCATCCTGAGCAATGTGCTCAAGAAGCGCAGCTGCATCTCGCGGACCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS GCA 72 bp GTCTTCAGCTCACTGGAGTCTTTCCGCTGCAGGTACTaGATCTGGAGCCGCAGGCTCGGGCGCTCCCGCAGC +
Preference number: 6 (lower is better)
Translates to: VFSSLESFRCRY*IWSRRLGRSRS
Trigger: GCTGCGGGAGCGCCCGAGCCTGCGGCTCCAGATGCAGTACCTGCAGCGGAAAGACTCCAGTGAGCTGAAGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219179.2
CDS GCA 72 bp CGAAGAACGGTCTTCAGCTCACTGGAGTCTTTCCGCTaGAGGTACTGCATCTGGAGCCGCAGGCTCGGGCGC +
Preference number: 6 (lower is better)
Translates to: RRTVFSSLESFR*RYCIWSRRLGR
Trigger: GCGCCCGAGCCTGCGGCTCCAGATGCAGTACCTGCAGCGGAAAGACTCCAGTGAGCTGAAGACCGTTCTTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219179.2
CDS CAA 72 bp GCAAAGAGCGTGAGGAACCACTGCATTGTGAAGACGTaGGTGAGCGGGGGCTCGTATCCGCCTCCGCTCTCT +
Preference number: 6 (lower is better)
Translates to: AKSVRNHCIVKT*VSGGSYPPPLS
Trigger: AGAGAGCGGAGGCGGATACGAGCCCCCGCTCACCAACGTCTTCACAATGCAGTGGTTCCTCACGCTCTTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS GCA 72 bp TTCGGGAGGCACGTGGCAAAGAGCGTGAGGAACCACTaGATTGTGAAGACGTTGGTGAGCGGGGGCTCGTAT +
Preference number: 6 (lower is better)
Translates to: FGRHVAKSVRNH*IVKTLVSGGSY
Trigger: ATACGAGCCCCCGCTCACCAACGTCTTCACAATGCAGTGGTTCCTCACGCTCTTTGCCACGTGCCTCCCGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS TCA 72 bp CCAGCTTTGCCCAGATGGCCAGCGACACCCTCAGGATaGTCTCTGAACCTTCGAAGAACACGGAGTCCCAGA +
Preference number: 6 (lower is better)
Translates to: PALPRWPATPSG*SLNLRRTRSPR
Trigger: TCTGGGACTCCGTGTTCTTCGAAGGTTCAGAGATCATCCTGAGGGTGTCGCTGGCCATCTGGGCAAAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS GCA 72 bp CTGGGTGAGGCGCCCCATGGTGCCGTAGAATTCGTCTaGTGTCTCGCAACATTCTATCTGCTCTCCCAGCTT +
Preference number: 6 (lower is better)
Translates to: LGEAPHGAVEFV*CLATFYLLSQL
Trigger: AAGCTGGGAGAGCAGATAGAATGTTGCGAGACAGCAGACGAATTCTACGGCACCATGGGGCGCCTCACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS CCA 72 bp TCGAAGAACACGGAGTCCCAGATCTTCAGAACCGTGTaGTTCGGGAGGCACGTGGCAAAGAGCGTGAGGAAC +
Preference number: 6 (lower is better)
Translates to: SKNTESQIFRTV*FGRHVAKSVRN
Trigger: GTTCCTCACGCTCTTTGCCACGTGCCTCCCGAACCACACGGTTCTGAAGATCTGGGACTCCGTGTTCTTCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS TCA 72 bp TGCCCAGATGGCCAGCGACACCCTCAGGATGATCTCTaGACCTTCGAAGAACACGGAGTCCCAGATCTTCAG +
Preference number: 6 (lower is better)
Translates to: CPDGQRHPQDDL*TFEEHGVPDLQ
Trigger: CTGAAGATCTGGGACTCCGTGTTCTTCGAAGGTTCAGAGATCATCCTGAGGGTGTCGCTGGCCATCTGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS CCA 72 bp TGTACTTCAGCTCTCGAAGAACGGTCTTCAGCTCACTaGAGTCTTTCCGCTGCAGGTACTGCATCTGGAGCC +
Preference number: 6 (lower is better)
Translates to: CTSALEERSSAH*SLSAAGTASGA
Trigger: GGCTCCAGATGCAGTACCTGCAGCGGAAAGACTCCAGTGAGCTGAAGACCGTTCTTCGAGAGCTGAAGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219179.2
CDS TCA 72 bp GAACTACAGCCCGTGCGATGCAGATCCTTGACGATTTaGATTCCCATGGAGTCGTCATCCGGGTTGCTTCTC +
Preference number: 6 (lower is better)
Translates to: ELQPVRCRSLTI*IPMESSSGLLL
Trigger: GAGAAGCAACCCGGATGACGACTCCATGGGAATTCAAATCGTCAAGGATCTGCATCGCACGGGCTGTAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064107.7
ENSMUST00000219179.2
CDS GCA 72 bp TCTGCTTCAGCTGCCGGAGTAACTTTGCGGACTGGATaGCAATCCTGTACTTCAGCTCTCGAAGAACGGTCT +
Preference number: 6 (lower is better)
Translates to: SASAAGVTLRTG*QSCTSALEERS
Trigger: AGACCGTTCTTCGAGAGCTGAAGTACAGGATTGGCATCCAGTCCGCAAAGTTACTCCGGCAGCTGAAGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219179.2
CDS CAA 72 bp GGAACTACAGCCCGTGCGATGCAGATCCTTGACGATTaGAATTCCCATGGAGTCGTCATCCGGGTTGCTTCT +
Preference number: 6 (lower is better)
Translates to: GTTARAMQILDD*NSHGVVIRVAS
Trigger: AGAAGCAACCCGGATGACGACTCCATGGGAATTCAAATCGTCAAGGATCTGCATCGCACGGGCTGTAGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064107.7
ENSMUST00000219179.2
CDS CCA 72 bp TCTTTCTGCTTCAGCTGCCGGAGTAACTTTGCGGACTaGATGCCAATCCTGTACTTCAGCTCTCGAAGAACG +
Preference number: 6 (lower is better)
Translates to: SFCFSCRSNFAD*MPILYFSSRRT
Trigger: CGTTCTTCGAGAGCTGAAGTACAGGATTGGCATCCAGTCCGCAAAGTTACTCCGGCAGCTGAAGCAGAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219179.2
CDS GCA 72 bp CAAGAGATCTCTGAAGACAGCCATATCCACAGACAGTaGCCGGAGATTATTGACAAAGTAGCTTTCGGGGAG +
Preference number: 6 (lower is better)
Translates to: QEISEDSHIHRQ*PEIIDKVAFGE
Trigger: CTCCCCGAAAGCTACTTTGTCAATAATCTCCGGGCACTGTCTGTGGATATGGCTGTCTTCAGAGATCTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7
CDS TCA 72 bp AGACAGCCATATCCACAGACAGTGCCCGGAGATTATTaGCAAAGTAGCTTTCGGGGAGTACCTTATCAATCA +
Preference number: 6 (lower is better)
Translates to: RQPYPQTVPGDY*QSSFRGVPYQS
Trigger: TGATTGATAAGGTACTCCCCGAAAGCTACTTTGTCAATAATCTCCGGGCACTGTCTGTGGATATGGCTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064107.7