Pregenerated sensors for TBC1D30 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052302Ensembl transcript IDs: ENSMUST00000064107.7, ENSMUST00000218111.2, ENSMUST00000219179.2
Found 278 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | GGAGTGCTGCCGCCTCCATCACCATCACCGCTGCTGCCTTCACTGTaGGCTGTTACTGTACGACCGGAGGGAAACTCCTCGGCTGCCCCC | + |
Preference number: 1 (lower is better) Translates to: GVLPPPSPSPLLPSL*AVTVRPEGNSSAAP Trigger: GGGGGCAGCCGAGGAGTTTCCCTCCGGTCGTACAGTAACAGCTCACAGTGAAGGCAGCAGCGGTGATGGTGATGGAGGCGGCAGCACTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR GCA 90 bp | CCCCAAACACTGGCTCCGGAGACTGCCCTTCGATCGTCCTCGGAGTaGTGCCGCCTCCATCACCATCACCGCTGCTGCCTTCACTGTGAG | + |
Preference number: 1 (lower is better) Translates to: PQTLAPETALRSSSE*CRLHHHHRCCLHCE Trigger: CTCACAGTGAAGGCAGCAGCGGTGATGGTGATGGAGGCGGCAGCACTCCGAGGACGATCGAAGGGCAGTCTCCGGAGCCAGTGTTTGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR GCA 90 bp | GCAGCCACGTCGACGTCAGCATCCCCAAACACTGGCTCCGGAGACTaGCCTTCGATCGTCCTCGGAGTGCTGCCGCCTCCATCACCATCA | + |
Preference number: 1 (lower is better) Translates to: AATSTSASPNTGSGD*PSIVLGVLPPPSPS Trigger: TGATGGTGATGGAGGCGGCAGCACTCCGAGGACGATCGAAGGGCAGTCTCCGGAGCCAGTGTTTGGGGATGCTGACGTCGACGTGGCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR GCA 90 bp | CAAACACTGGCTCCGGAGACTGCCCTTCGATCGTCCTCGGAGTGCTaGCGCCTCCATCACCATCACCGCTGCTGCCTTCACTGTGAGCTG | + |
Preference number: 1 (lower is better) Translates to: QTLAPETALRSSSEC*RLHHHHRCCLHCEL Trigger: CAGCTCACAGTGAAGGCAGCAGCGGTGATGGTGATGGAGGCGGCAGCACTCCGAGGACGATCGAAGGGCAGTCTCCGGAGCCAGTGTTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR GCA 90 bp | CCAGGGGCATCGGCTAACTCTGAAGCGTGCCGCTGGCAGGGGAAGTaGACCTTGGGTTCCGTTTCTGCCGCGGCATCCCTTTGGTTCAGT | + |
Preference number: 1 (lower is better) Translates to: PGASANSEACRWQGK*TLGSVSAAASLWFS Trigger: ACTGAACCAAAGGGATGCCGCGGCAGAAACGGAACCCAAGGTGCACTTCCCCTGCCAGCGGCACGCTTCAGAGTTAGCCGATGCCCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR CCA 90 bp | TTTCACCTGAACTGCAGCCACGTCGACGTCAGCATCCCCAAACACTaGCTCCGGAGACTGCCCTTCGATCGTCCTCGGAGTGCTGCCGCC | + |
Preference number: 1 (lower is better) Translates to: FHLNCSHVDVSIPKH*LRRLPFDRPRSAAA Trigger: GGCGGCAGCACTCCGAGGACGATCGAAGGGCAGTCTCCGGAGCCAGTGTTTGGGGATGCTGACGTCGACGTGGCTGCAGTTCAGGTGAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR CCA 90 bp | CATCGGCTAACTCTGAAGCGTGCCGCTGGCAGGGGAAGTGCACCTTaGGTTCCGTTTCTGCCGCGGCATCCCTTTGGTTCAGTTCCAAGG | + |
Preference number: 1 (lower is better) Translates to: HRLTLKRAAGRGSAP*VPFLPRHPFGSVPR Trigger: CCTTGGAACTGAACCAAAGGGATGCCGCGGCAGAAACGGAACCCAAGGTGCACTTCCCCTGCCAGCGGCACGCTTCAGAGTTAGCCGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR TCA 90 bp | CCAACTGCGGGAACGGGAAAGGGGCCATCGAATACACGGTCTGCATaGGTTCATGGCTCTGTAGCAGATCCTGCTCCAGCATCTCCTGGG | + |
Preference number: 1 (lower is better) Translates to: PTAGTGKGPSNTRSA*VHGSVADPAPASPG Trigger: CCCAGGAGATGCTGGAGCAGGATCTGCTACAGAGCCATGAACTCATGCAGACCGTGTATTCGATGGCCCCTTTCCCGTTCCCGCAGTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR GCA 90 bp | CTCAGTCGCTTCTTTAATCTGCTTTTGGTACTTCTGCAGTTCAGGTaGCAGGAGCCCACTGAGCGGTCCAAGGCACCCCACGGCACTCGC | + |
Preference number: 1 (lower is better) Translates to: LSRFFNLLLVLLQFR*QEPTERSKAPHGTR Trigger: GCGAGTGCCGTGGGGTGCCTTGGACCGCTCAGTGGGCTCCTGGCACCTGAACTGCAGAAGTACCAAAAGCAGATTAAAGAAGCGACTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR GCA 90 bp | CTGTTACTGTACGACCGGAGGGAAACTCCTCGGCTGCCCCCAAGCTaGTGGCCTTACAGCCTTCACTCTGTTCTTCTATCAGCCCTACCG | + |
Preference number: 1 (lower is better) Translates to: LLLYDRRETPRLPPS*WPYSLHSVLLSALP Trigger: CGGTAGGGCTGATAGAAGAACAGAGTGAAGGCTGTAAGGCCAGCAGCTTGGGGGCAGCCGAGGAGTTTCCCTCCGGTCGTACAGTAACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR TCA 90 bp | GCCGCGGCATCCCTTTGGTTCAGTTCCAAGGCTTCTAATTTCACCTaGACTGCAGCCACGTCGACGTCAGCATCCCCAAACACTGGCTCC | + |
Preference number: 1 (lower is better) Translates to: AAASLWFSSKASNFT*TAATSTSASPNTGS Trigger: GGAGCCAGTGTTTGGGGATGCTGACGTCGACGTGGCTGCAGTTCAGGTGAAATTAGAAGCCTTGGAACTGAACCAAAGGGATGCCGCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR GCA 90 bp | TCTGCCAACTGCGGGAACGGGAAAGGGGCCATCGAATACACGGTCTaGATGAGTTCATGGCTCTGTAGCAGATCCTGCTCCAGCATCTCC | + |
Preference number: 1 (lower is better) Translates to: SANCGNGKGAIEYTV*MSSWLCSRSCSSIS Trigger: GGAGATGCTGGAGCAGGATCTGCTACAGAGCCATGAACTCATGCAGACCGTGTATTCGATGGCCCCTTTCCCGTTCCCGCAGTTGGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR CCA 90 bp | GTACACCATATACGTATGATCTCTCCCTCCCTGCGTTCCTCCCTCTaGCCGCTTCTATTCAGGAGCCTGCTCTTCTGTCCCCTTCTGGGC | + |
Preference number: 1 (lower is better) Translates to: VHHIRMISPSLRSSL*PLLFRSLLFCPLLG Trigger: GCCCAGAAGGGGACAGAAGAGCAGGCTCCTGAATAGAAGCGGCCAGAGGGAGGAACGCAGGGAGGGAGAGATCATACGTATATGGTGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR CCA 90 bp | TTACTGTACGACCGGAGGGAAACTCCTCGGCTGCCCCCAAGCTGCTaGCCTTACAGCCTTCACTCTGTTCTTCTATCAGCCCTACCGTGT | + |
Preference number: 1 (lower is better) Translates to: LLYDRRETPRLPPSC*PYSLHSVLLSALPC Trigger: ACACGGTAGGGCTGATAGAAGAACAGAGTGAAGGCTGTAAGGCCAGCAGCTTGGGGGCAGCCGAGGAGTTTCCCTCCGGTCGTACAGTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR TCA 90 bp | GGCGTCATCGCTTCTTGGTGCTGCTGTTCCCAATGCCGGACTTGTTaGAGCCCCTGCTCATCTGAGGGAAGTGCACGTTTGGGGTTCTTT | + |
Preference number: 1 (lower is better) Translates to: GVIASWCCCSQCRTC*SPCSSEGSARLGFF Trigger: AAAGAACCCCAAACGTGCACTTCCCTCAGATGAGCAGGGGCTTCAACAAGTCCGGCATTGGGAACAGCAGCACCAAGAAGCGATGACGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR GCA 90 bp | ATTCAGGAGCCTGCTCTTCTGTCCCCTTCTGGGCAAATGAAAAGGTaGCCTGCACCCAGTGGTAAGAGCAGGAATGAACAGGGCCCTGAG | + |
Preference number: 1 (lower is better) Translates to: IQEPALLSPSGQMKR*PAPSGKSRNEQGPE Trigger: CTCAGGGCCCTGTTCATTCCTGCTCTTACCACTGGGTGCAGGGCACCTTTTCATTTGCCCAGAAGGGGACAGAAGAGCAGGCTCCTGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR GCA 90 bp | AGGGTCTGTTCCTCAGTCGCTTCTTTAATCTGCTTTTGGTACTTCTaGAGTTCAGGTGCCAGGAGCCCACTGAGCGGTCCAAGGCACCCC | + |
Preference number: 1 (lower is better) Translates to: RVCSSVASLICFWYF*SSGARSPLSGPRHP Trigger: GGGGTGCCTTGGACCGCTCAGTGGGCTCCTGGCACCTGAACTGCAGAAGTACCAAAAGCAGATTAAAGAAGCGACTGAGGAACAGACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR CCA 90 bp | CCCCAGAAGAAGGTGGTTGATCACGGGAGAACTATTTGCCTGCGATaGGAGGATGCTGGTCACCGGCCCTTTGTCTGCCCTTATGTACAC | + |
Preference number: 1 (lower is better) Translates to: PQKKVVDHGRTICLR*EDAGHRPFVCPYVH Trigger: GTGTACATAAGGGCAGACAAAGGGCCGGTGACCAGCATCCTCCCATCGCAGGCAAATAGTTCTCCCGTGATCAACCACCTTCTTCTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR GCA 90 bp | CATCTTTTTCCCCAGAAGAAGGTGGTTGATCACGGGAGAACTATTTaGCTGCGATGGGAGGATGCTGGTCACCGGCCCTTTGTCTGCCCT | + |
Preference number: 1 (lower is better) Translates to: HLFPQKKVVDHGRTI*LRWEDAGHRPFVCP Trigger: AGGGCAGACAAAGGGCCGGTGACCAGCATCCTCCCATCGCAGGCAAATAGTTCTCCCGTGATCAACCACCTTCTTCTGGGGAAAAAGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR GCA 90 bp | TTCACTGTGAGCTGTTACTGTACGACCGGAGGGAAACTCCTCGGCTaGCCCCAAGCTGCTGGCCTTACAGCCTTCACTCTGTTCTTCTAT | + |
Preference number: 1 (lower is better) Translates to: FTVSCYCTTGGKLLG*PQAAGLTAFTLFFY Trigger: ATAGAAGAACAGAGTGAAGGCTGTAAGGCCAGCAGCTTGGGGGCAGCCGAGGAGTTTCCCTCCGGTCGTACAGTAACAGCTCACAGTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR CCA 90 bp | GTTGAACGCTGCATGGTACTCACTCCGACAGGAATTGATGGCTCCTaGGCTCAGCTCTGCGATGTTGTTCGATCTGAGGGTCTGTTCCTC | + |
Preference number: 1 (lower is better) Translates to: VERCMVLTPTGIDGS*AQLCDVVRSEGLFL Trigger: GAGGAACAGACCCTCAGATCGAACAACATCGCAGAGCTGAGCCCAGGAGCCATCAATTCCTGTCGGAGTGAGTACCATGCAGCGTTCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR GCA 90 bp | TTTTTCCCCAGAAGAAGGTGGTTGATCACGGGAGAACTATTTGCCTaGGATGGGAGGATGCTGGTCACCGGCCCTTTGTCTGCCCTTATG | + |
Preference number: 1 (lower is better) Translates to: FFPRRRWLITGELFA*DGRMLVTGPLSALM Trigger: CATAAGGGCAGACAAAGGGCCGGTGACCAGCATCCTCCCATCGCAGGCAAATAGTTCTCCCGTGATCAACCACCTTCTTCTGGGGAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR GCA 90 bp | CAAGTAACAGTCACTGTGCGGTGTTCTGGTTTGGAGCTGTGCATCTaGAGTGGAGAGAGAGCTGGTAGCGATCAGAACCATGTTCAGAGG | + |
Preference number: 1 (lower is better) Translates to: QVTVTVRCSGLELCI*SGERAGSDQNHVQR Trigger: CCTCTGAACATGGTTCTGATCGCTACCAGCTCTCTCTCCACTGCAGATGCACAGCTCCAAACCAGAACACCGCACAGTGACTGTTACTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR GCA 90 bp | GTTCCCAACTGCATAGTAGAGACAAGAGATGCTCTCCCTCTGATCTaGTGGGACCAGGGTAGGAGTGGAAAGACAGAAAGAACATGGGGG | + |
Preference number: 1 (lower is better) Translates to: VPNCIVETRDALPLI*WDQGRSGKTERTWG Trigger: CCCCCATGTTCTTTCTGTCTTTCCACTCCTACCCTGGTCCCAGCAGATCAGAGGGAGAGCATCTCTTGTCTCTACTATGCAGTTGGGAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR GCA 90 bp | GGCTGGAAACGGTGTGATGTTATAGGTATACTTTTCCCTCAACTCTaGCAACTGCGGGAACGGGAAAGGGGCCATCGAATACACGGTCTG | + |
Preference number: 1 (lower is better) Translates to: GWKRCDVIGILFPQL*QLRERERGHRIHGL Trigger: CAGACCGTGTATTCGATGGCCCCTTTCCCGTTCCCGCAGTTGGCAGAGTTGAGGGAAAAGTATACCTATAACATCACACCGTTTCCAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR GCA 90 bp | CTCAGTTCATTCTTATTGGACAAAAGAAACAGGAAGGGCGTAGCCTaGCACGTGAGTCTAGCCACTGAGCCACTTCGAGGCGTCATCGCT | + |
Preference number: 1 (lower is better) Translates to: LSSFLLDKRNRKGVA*HVSLATEPLRGVIA Trigger: AGCGATGACGCCTCGAAGTGGCTCAGTGGCTAGACTCACGTGGCAGGCTACGCCCTTCCTGTTTCTTTTGTCCAATAAGAATGAACTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR CCA 90 bp | CCCAACTGCATAGTAGAGACAAGAGATGCTCTCCCTCTGATCTGCTaGGACCAGGGTAGGAGTGGAAAGACAGAAAGAACATGGGGGAAA | + |
Preference number: 1 (lower is better) Translates to: PNCIVETRDALPLIC*DQGRSGKTERTWGK Trigger: TTTCCCCCATGTTCTTTCTGTCTTTCCACTCCTACCCTGGTCCCAGCAGATCAGAGGGAGAGCATCTCTTGTCTCTACTATGCAGTTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR TCA 90 bp | ATCTGGTCCCCACCATGGAACTTCCAATTCCCGTTTGGATGGGGCTaGTGGTGCTCAGCTCTGAACCTCTCAGTTCATTCTTATTGGACA | + |
Preference number: 1 (lower is better) Translates to: IWSPPWNFQFPFGWG*WCSALNLSVHSYWT Trigger: TGTCCAATAAGAATGAACTGAGAGGTTCAGAGCTGAGCACCATCAGCCCCATCCAAACGGGAATTGGAAGTTCCATGGTGGGGACCAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064107.7 ENSMUST00000218111.2 |
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3UTR CCA 90 bp | TCTCTCCCTCCAAACACTAAGACCCTCAAGAGCCAGGGATCTTGGTaGAGAGAGAACCATTTTCTCTTCAAGTCAGTCATGGGGTGTGTG | + |
Preference number: 1 (lower is better) Translates to: SLPPNTKTLKSQGSW*RENHFLFKSVMGCV Trigger: CACACACCCCATGACTGACTTGAAGAGAAAATGGTTCTCTCTCCACCAAGATCCCTGGCTCTTGAGGGTCTTAGTGTTTGGAGGGAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR CCA 90 bp | CCATCTCTCCCTCCAAACACTAAGACCCTCAAGAGCCAGGGATCTTaGTGGAGAGAGAACCATTTTCTCTTCAAGTCAGTCATGGGGTGT | + |
Preference number: 1 (lower is better) Translates to: PSLPPNTKTLKSQGS*WRENHFLFKSVMGC Trigger: ACACCCCATGACTGACTTGAAGAGAAAATGGTTCTCTCTCCACCAAGATCCCTGGCTCTTGAGGGTCTTAGTGTTTGGAGGGAGAGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR CCA 90 bp | AATGTCTTCATAGGGGACGGGAGAGATTTTCCCTCCTGGGTGGCCTaGCACGTGGATCACTGCATTCTTGGCTGCTCTGTTTGTAATTTT | + |
Preference number: 1 (lower is better) Translates to: NVFIGDGRDFPSWVA*HVDHCILGCSVCNF Trigger: AAAATTACAAACAGAGCAGCCAAGAATGCAGTGATCCACGTGCCAGGCCACCCAGGAGGGAAAATCTCTCCCGTCCCCTATGAAGACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR TCA 90 bp | GTTCTCATCGTCACTATCTCTGGCCTTACTGTGTCGCCCAGAAACTaGAGTGGGCTTAATCGTGGCTGGAAACGGTGTGATGTTATAGGT | + |
Preference number: 1 (lower is better) Translates to: VLIVTISGLTVSPRN*SGLNRGWKRCDVIG Trigger: ACCTATAACATCACACCGTTTCCAGCCACGATTAAGCCCACTTCAGTTTCTGGGCGACACAGTAAGGCCAGAGATAGTGACGATGAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR TCA 90 bp | GGAACTTCCAATTCCCGTTTGGATGGGGCTGATGGTGCTCAGCTCTaGACCTCTCAGTTCATTCTTATTGGACAAAAGAAACAGGAAGGG | + |
Preference number: 1 (lower is better) Translates to: GTSNSRLDGADGAQL*TSQFILIGQKKQEG Trigger: CCCTTCCTGTTTCTTTTGTCCAATAAGAATGAACTGAGAGGTTCAGAGCTGAGCACCATCAGCCCCATCCAAACGGGAATTGGAAGTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064107.7 ENSMUST00000218111.2 |
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3UTR GCA 90 bp | GGCAGACTCGGAAATAAACTGCAGTTATTAAGTTCTTCCGGTGTTTaGATACAGTGTCCGACACGTGGGGAAGATGGACAGTCACAACTG | + |
Preference number: 1 (lower is better) Translates to: GRLGNKLQLLSSSGV*IQCPTRGEDGQSQL Trigger: CAGTTGTGACTGTCCATCTTCCCCACGTGTCGGACACTGTATGCAAACACCGGAAGAACTTAATAACTGCAGTTTATTTCCGAGTCTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR CCA 90 bp | AGGGATCTTGGTGGAGAGAGAACCATTTTCTCTTCAAGTCAGTCATaGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAT | + |
Preference number: 1 (lower is better) Translates to: RDLGGERTIFSSSQS*GVCVCVCVCVCVCD Trigger: ATCACACACACACACACACACACACACACACACACACACACCCCATGACTGACTTGAAGAGAAAATGGTTCTCTCTCCACCAAGATCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR TCA 90 bp | AGATTTGGTTTCAGAAATAGCAAAGCAACTCACTCAAACCAACATTaGCGGCTTCAACAGAGTTCCTGGGAGGAGCCAAAGGCTCTGGGA | + |
Preference number: 1 (lower is better) Translates to: RFGFRNSKATHSNQH*RLQQSSWEEPKALG Trigger: TCCCAGAGCCTTTGGCTCCTCCCAGGAACTCTGTTGAAGCCGTCAATGTTGGTTTGAGTGAGTTGCTTTGCTATTTCTGAAACCAAATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR TCA 90 bp | GCAATAGACCAGCTTGTCGTAGAAGAAACACTGGATTATTTACCGTaGGTTACTGAAGTGCCACTTAACCTGTGTGGCTCAGAGTTCCCA | + |
Preference number: 1 (lower is better) Translates to: AIDQLVVEETLDYLP*VTEVPLNLCGSEFP Trigger: TGGGAACTCTGAGCCACACAGGTTAAGTGGCACTTCAGTAACTCACGGTAAATAATCCAGTGTTTCTTCTACGACAAGCTGGTCTATTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR TCA 90 bp | CTAGGAGGAAGGAACGCTAAGCTTCCTGCACATTCAGACAGGAAATaGCTCCGCCACCACAACAGTGAGAATCTTTATGCATATATCTCT | + |
Preference number: 1 (lower is better) Translates to: LGGRNAKLPAHSDRK*LRHHNSENLYAYIS Trigger: AGAGATATATGCATAAAGATTCTCACTGTTGTGGTGGCGGAGTCATTTCCTGTCTGAATGTGCAGGAAGCTTAGCGTTCCTTCCTCCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR GCA 90 bp | ATGAGCCTCCAGAAAGGTGGCAATCAGCAAACCGTTCAGAGCAGTTaGTTAATGCATAGTCCACCTGTGTCTCTGCATATAGTCTTCAAT | + |
Preference number: 1 (lower is better) Translates to: MSLQKGGNQQTVQSS*LMHSPPVSLHIVFN Trigger: ATTGAAGACTATATGCAGAGACACAGGTGGACTATGCATTAAGCAACTGCTCTGAACGGTTTGCTGATTGCCACCTTTCTGGAGGCTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR CCA 90 bp | AACATTGACGGCTTCAACAGAGTTCCTGGGAGGAGCCAAAGGCTCTaGGAAACGAAGGTAAAGATATCACTGTATTCTGCTAATGATGGT | + |
Preference number: 1 (lower is better) Translates to: NIDGFNRVPGRSQRL*ETKVKISLYSANDG Trigger: ACCATCATTAGCAGAATACAGTGATATCTTTACCTTCGTTTCCCAGAGCCTTTGGCTCCTCCCAGGAACTCTGTTGAAGCCGTCAATGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR TCA 90 bp | TTGTTCTCTAAGTGGCAAGGCTCAGAAGTCCGTCAGTTCACATTGTaGTTACCTGGTACAGTGCATGCATGTTATCAGTACAGAGAGCTT | + |
Preference number: 1 (lower is better) Translates to: LFSKWQGSEVRQFTL*LPGTVHACYQYREL Trigger: AAGCTCTCTGTACTGATAACATGCATGCACTGTACCAGGTAATCACAATGTGAACTGACGGACTTCTGAGCCTTGCCACTTAGAGAACAA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR TCA 90 bp | ACTAGGTTTAGATCTAGATCTTTTTGGAGAGGACTGAGGTGCAGTTaGCTTCCAGAAAAAGTGCTGAAAGGGTACAGGCAGACTCGGAAA | + |
Preference number: 1 (lower is better) Translates to: TRFRSRSFWRGLRCS*LPEKVLKGYRQTRK Trigger: TTTCCGAGTCTGCCTGTACCCTTTCAGCACTTTTTCTGGAAGTCAACTGCACCTCAGTCCTCTCCAAAAAGATCTAGATCTAAACCTAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR TCA 90 bp | GCTTCCTGCACATTCAGACAGGAAATGACTCCGCCACCACAACAGTaGGAATCTTTATGCATATATCTCTGTGATCAGTACAGTTCTTCA | + |
Preference number: 1 (lower is better) Translates to: ASCTFRQEMTPPPQQ*ESLCIYLCDQYSSS Trigger: TGAAGAACTGTACTGATCACAGAGATATATGCATAAAGATTCTCACTGTTGTGGTGGCGGAGTCATTTCCTGTCTGAATGTGCAGGAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR GCA 90 bp | CTCAGAAGTCCGTCAGTTCACATTGTGATTACCTGGTACAGTGCATaGATGTTATCAGTACAGAGAGCTTTAACAGGAATCTGTTGGGTT | + |
Preference number: 1 (lower is better) Translates to: LRSPSVHIVITWYSA*MLSVQRALTGICWV Trigger: AACCCAACAGATTCCTGTTAAAGCTCTCTGTACTGATAACATGCATGCACTGTACCAGGTAATCACAATGTGAACTGACGGACTTCTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR GCA 90 bp | AAGGCTCAGAAGTCCGTCAGTTCACATTGTGATTACCTGGTACAGTaGATGCATGTTATCAGTACAGAGAGCTTTAACAGGAATCTGTTG | + |
Preference number: 1 (lower is better) Translates to: KAQKSVSSHCDYLVQ*MHVISTESFNRNLL Trigger: CAACAGATTCCTGTTAAAGCTCTCTGTACTGATAACATGCATGCACTGTACCAGGTAATCACAATGTGAACTGACGGACTTCTGAGCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR CCA 90 bp | GTAGATAAAAGAAATTCTCTTCTTGTGCTTAACTTTGGGAAACAGTaGGTCTCATCATCTGGGGGTGGCATACAAAGTAAGCCCACGCAA | + |
Preference number: 1 (lower is better) Translates to: VDKRNSLLVLNFGKQ*VSSSGGGIQSKPTQ Trigger: TTGCGTGGGCTTACTTTGTATGCCACCCCCAGATGATGAGACCCACTGTTTCCCAAAGTTAAGCACAAGAAGAGAATTTCTTTTATCTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR-3UTR TCA 90 bp | GAACTGCAGCCACGTCGACGTCAGCATCCCCAAACACTGGCTCCGGAGACTGCCCCAGCATCTCCTGGGTaGGGCGCCCCATGGTGCCGT | + |
Preference number: 2 (lower is better) Translates to: ELQPRRRQHPQTLAPETAPASPG*GAPWCR Trigger: ACGGCACCATGGGGCGCCTCACCCAGGAGATGCTGG...GGCAGTCTCCGGAGCCAGTGTTTGGGGATGCTGACGTCGACGTGGCTGCAGTTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR-3UTR GCA 90 bp | GAACTGCAGCCACGTCGACGTCAGCATCCCCAAACACTGGCTCCGGAGACTGCCCTTCTGCAGTTCAGGTaGCAGGAGCCCACTGAGCGG | + |
Preference number: 2 (lower is better) Translates to: ELQPRRRQHPQTLAPETALLQFR*QEPTER Trigger: CCGCTCAGTGGGCTCCTGGCACCTGAACTGCAGAAG...GGCAGTCTCCGGAGCCAGTGTTTGGGGATGCTGACGTCGACGTGGCTGCAGTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR CAA 90 bp | GCATCGGCTAACTCTGAAGCGTGCCGCTGGCAGGGGAAGTGCACCTaGGGTTCCGTTTCTGCCGCGGCATCCCTTTGGTTCAGTTCCAAG | + |
Preference number: 2 (lower is better) Translates to: ASANSEACRWQGKCT*GSVSAAASLWFSSK Trigger: CTTGGAACTGAACCAAAGGGATGCCGCGGCAGAAACGGAACCCAAGGTGCACTTCCCCTGCCAGCGGCACGCTTCAGAGTTAGCCGATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR-3UTR GCA 90 bp | CCAAGGCACCCCACGGCACTCGCAACAGCATCCTCATCATCCGGGCCGTTCTCACTCTGTAGCAGATCCTaGTCCAGCATCTCCTGGGTG | + |
Preference number: 2 (lower is better) Translates to: PRHPTALATASSSSGPFSLCSRS*SSISWV Trigger: CACCCAGGAGATGCTGGAGCAGGATCTGCTACAGAG...TGAGAACGGCCCGGATGATGAGGATGCTGTTGCGAGTGCCGTGGGGTGCCTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR-3UTR CCA 90 bp | GAACTGCAGCCACGTCGACGTCAGCATCCCCAAACACTGGCTCCGGAGACTGCCATTTTCCCTCCTGGGTaGCCTGGCACGTGGATCACT | + |
Preference number: 2 (lower is better) Translates to: ELQPRRRQHPQTLAPETAIFPPG*PGTWIT Trigger: AGTGATCCACGTGCCAGGCCACCCAGGAGGGAAAAT...GGCAGTCTCCGGAGCCAGTGTTTGGGGATGCTGACGTCGACGTGGCTGCAGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR-3UTR GCA 90 bp | AGTGCACCTTGGGTTCCGTTTCTGCCGCGGCATCCCTTTGGTTCAGTTCCAAGGCTCAACTCTGCCAACTaGGGGAACGGGAAAGGGGCC | + |
Preference number: 2 (lower is better) Translates to: SAPWVPFLPRHPFGSVPRLNSAN*GNGKGA Trigger: GGCCCCTTTCCCGTTCCCGCAGTTGGCAGAGTTGAG...CCTTGGAACTGAACCAAAGGGATGCCGCGGCAGAAACGGAACCCAAGGTGCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR-3UTR CCA 90 bp | CTTTACCCAGCAGATGGGCAAAGGTCCCATCTGGTCCCCACCATGGAACTTCCATGCTCCAGCATCTCCTaGGTGAGGCGCCCCATGGTG | + |
Preference number: 2 (lower is better) Translates to: LYPADGQRSHLVPTMELPCSSIS*VRRPMV Trigger: CACCATGGGGCGCCTCACCCAGGAGATGCTGGAGCA...TGGAAGTTCCATGGTGGGGACCAGATGGGACCTTTGCCCATCTGCTGGGTAAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR-3UTR TCA 90 bp | TGGTTGATCACGGGAGAACTATTTGCCTGCGATGGGAGGATGCTGGTCACCGGCCCGTTTGGATGGGGCTaGTGGTGCTCAGCTCTGAAC | + |
Preference number: 2 (lower is better) Translates to: WLITGELFACDGRMLVTGPFGWG*WCSALN Trigger: GTTCAGAGCTGAGCACCATCAGCCCCATCCAAACGG...GCCGGTGACCAGCATCCTCCCATCGCAGGCAAATAGTTCTCCCGTGATCAACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR-3UTR GCA 90 bp | TCAGCATCCCCAAACACTGGCTCCGGAGACTGCCCTTCGATCGTCCTCGGAGTGGGAGAACTATTTGCCTaGGATGGGAGGATGCTGGTC | + |
Preference number: 2 (lower is better) Translates to: SASPNTGSGDCPSIVLGVGELFA*DGRMLV Trigger: GACCAGCATCCTCCCATCGCAGGCAAATAGTTCTCC...CACTCCGAGGACGATCGAAGGGCAGTCTCCGGAGCCAGTGTTTGGGGATGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR-3UTR CCA 90 bp | GTGCTTCCCGGGAGAAGTTTGATGGCAGTCTGGTTTTCTCCAGGGGCATCGGCTAGCATCCCCAAACACTaGCTCCGGAGACTGCCCTTC | + |
Preference number: 2 (lower is better) Translates to: VLPGRSLMAVWFSPGASASIPKH*LRRLPF Trigger: GAAGGGCAGTCTCCGGAGCCAGTGTTTGGGGATGCT...AGCCGATGCCCCTGGAGAAAACCAGACTGCCATCAAACTTCTCCCGGGAAGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR-3UTR CCA 90 bp | GCTGCTGCCTTCACTGTGAGCTGTTACTGTACGACCGGAGGGAAACTCCTCGGCCATCGTCACTATCTCTaGCCTTACTGTGTCGCCCAG | + |
Preference number: 2 (lower is better) Translates to: AAAFTVSCYCTTGGKLLGHRHYL*PYCVAQ Trigger: CTGGGCGACACAGTAAGGCCAGAGATAGTGACGATG...GCCGAGGAGTTTCCCTCCGGTCGTACAGTAACAGCTCACAGTGAAGGCAGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR-3UTR TCA 90 bp | AATCCACTTTACCCAGCAGATGGGCAAAGGTCCCATCTGGTCCCCACCATGGAACCGTTTGGATGGGGCTaGTGGTGCTCAGCTCTGAAC | + |
Preference number: 2 (lower is better) Translates to: NPLYPADGQRSHLVPTMEPFGWG*WCSALN Trigger: GTTCAGAGCTGAGCACCATCAGCCCCATCCAAACGG...TTCCATGGTGGGGACCAGATGGGACCTTTGCCCATCTGCTGGGTAAAGTGGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064107.7 ENSMUST00000218111.2 |
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3UTR-3UTR GCA 90 bp | CCTCCCTCTGGCCGCTTCTATTCAGGAGCCTGCTCTTCTGTCCCCTTCTGGGCAAGTTCTTCCGGTGTTTaGATACAGTGTCCGACACGT | + |
Preference number: 2 (lower is better) Translates to: PPSGRFYSGACSSVPFWASSSGV*IQCPTR Trigger: ACGTGTCGGACACTGTATGCAAACACCGGAAGAACT...TGCCCAGAAGGGGACAGAAGAGCAGGCTCCTGAATAGAAGCGGCCAGAGGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR-3UTR CCA 90 bp | CCTCCCTCTGGCCGCTTCTATTCAGGAGCCTGCTCTTCTGTCCCCTTCTGGGCAAGCCAGGGATCTTGGTaGAGAGAGAACCATTTTCTC | + |
Preference number: 2 (lower is better) Translates to: PPSGRFYSGACSSVPFWASQGSW*RENHFL Trigger: GAGAAAATGGTTCTCTCTCCACCAAGATCCCTGGCT...TGCCCAGAAGGGGACAGAAGAGCAGGCTCCTGAATAGAAGCGGCCAGAGGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR-3UTR CCA 90 bp | TCGGGAGTACTGCCGCTTCAGGGCGTTGATGTCCGTGGTCATCCGCTCCATCATGTCTGCATGAGTTCATaGCTCTGTAGCAGATCCTGC | + |
Preference number: 2 (lower is better) Translates to: SGVLPLQGVDVRGHPLHHVCMSS*LCSRSC Trigger: GCAGGATCTGCTACAGAGCCATGAACTCATGCAGAC...ATGATGGAGCGGATGACCACGGACATCAACGCCCTGAAGCGGCAGTACTCCCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR-3UTR TCA 90 bp | GAACTTCCAATTCCCGTTTGGATGGGGCTGATGGTGCTCAGCTCTGAACCTCTCGATCCAAAAAGGCCCTaGGAAGGCCAGAAGAGGGCT | + |
Preference number: 2 (lower is better) Translates to: ELPIPVWMGLMVLSSEPLDPKRP*EGQKRA Trigger: AGCCCTCTTCTGGCCTTCTCAGGGCCTTTTTGGATC...GAGAGGTTCAGAGCTGAGCACCATCAGCCCCATCCAAACGGGAATTGGAAGTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR CAA 90 bp | CGGCCCTTTGTCTGCCCTTATGTACACCTGATGGAGCTGCTGCTGTaGCTTCTTCTTAATTCGGGAGTACTGCCGCTTCAGGGCGTTGAT | + |
Preference number: 2 (lower is better) Translates to: RPFVCPYVHLMELLL*LLLNSGVLPLQGVD Trigger: ATCAACGCCCTGAAGCGGCAGTACTCCCGAATTAAGAAGAAGCAACAGCAGCAGCTCCATCAGGTGTACATAAGGGCAGACAAAGGGCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR-3UTR TCA 90 bp | ACACCATATACGTATGATCTCTCCCTCCCTGCGTTCCTCCCTCTGGCCGCTTCTGGACTGAGGTGCAGTTaGCTTCCAGAAAAAGTGCTG | + |
Preference number: 2 (lower is better) Translates to: TPYTYDLSLPAFLPLAASGLRCS*LPEKVL Trigger: CAGCACTTTTTCTGGAAGTCAACTGCACCTCAGTCC...AGAAGCGGCCAGAGGGAGGAACGCAGGGAGGGAGAGATCATACGTATATGGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR-3UTR GCA 90 bp | GTGCTTCCCGGGAGAAGTTTGATGGCAGTCTGGTTTTCTCCAGGGGCATCGGCTTGGAGCTGCTGCTGTTaGTTCTTCTTAATTCGGGAG | + |
Preference number: 2 (lower is better) Translates to: VLPGRSLMAVWFSPGASAWSCCC*FFLIRE Trigger: CTCCCGAATTAAGAAGAAGCAACAGCAGCAGCTCCA...AGCCGATGCCCCTGGAGAAAACCAGACTGCCATCAAACTTCTCCCGGGAAGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR-3UTR GCA 90 bp | GAACTTCCAATTCCCGTTTGGATGGGGCTGATGGTGCTCAGCTCTGAACCTCTCCACGGGAGAACTATTTaGCTGCGATGGGAGGATGCT | + |
Preference number: 2 (lower is better) Translates to: ELPIPVWMGLMVLSSEPLHGRTI*LRWEDA Trigger: AGCATCCTCCCATCGCAGGCAAATAGTTCTCCCGTG...GAGAGGTTCAGAGCTGAGCACCATCAGCCCCATCCAAACGGGAATTGGAAGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR CAA 90 bp | TTCAGGGCGTTGATGTCCGTGGTCATCCGCTCCATCATCATACTGTaGAACGCTGCATGGTACTCACTCCGACAGGAATTGATGGCTCCT | + |
Preference number: 2 (lower is better) Translates to: FRALMSVVIRSIIIL*NAAWYSLRQELMAP Trigger: AGGAGCCATCAATTCCTGTCGGAGTGAGTACCATGCAGCGTTCAACAGTATGATGATGGAGCGGATGACCACGGACATCAACGCCCTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR-3UTR TCA 90 bp | ACACCATATACGTATGATCTCTCCCTCCCTGCGTTCCTCCCTCTGGCCGCTTCTTCACAACTCATTCTGTaGACACCATTCCGGGACTCT | + |
Preference number: 2 (lower is better) Translates to: TPYTYDLSLPAFLPLAASSQLIL*TPFRDS Trigger: AGAGTCCCGGAATGGTGTTCACAGAATGAGTTGTGA...AGAAGCGGCCAGAGGGAGGAACGCAGGGAGGGAGAGATCATACGTATATGGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR-3UTR GCA 90 bp | CTTTACCCAGCAGATGGGCAAAGGTCCCATCTGGTCCCCACCATGGAACTTCCACGTGAGTTACTGAAGTaGCACTTAACCTGTGTGGCT | + |
Preference number: 2 (lower is better) Translates to: LYPADGQRSHLVPTMELPRELLK*HLTCVA Trigger: AGCCACACAGGTTAAGTGGCACTTCAGTAACTCACG...TGGAAGTTCCATGGTGGGGACCAGATGGGACCTTTGCCCATCTGCTGGGTAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR CAA 90 bp | ATCATCATACTGTTGAACGCTGCATGGTACTCACTCCGACAGGAATaGATGGCTCCTGGGCTCAGCTCTGCGATGTTGTTCGATCTGAGG | + |
Preference number: 2 (lower is better) Translates to: IIILLNAAWYSLRQE*MAPGLSSAMLFDLR Trigger: CCTCAGATCGAACAACATCGCAGAGCTGAGCCCAGGAGCCATCAATTCCTGTCGGAGTGAGTACCATGCAGCGTTCAACAGTATGATGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR CAA 90 bp | TGCTGTTGCTTCTTCTTAATTCGGGAGTACTGCCGCTTCAGGGCGTaGATGTCCGTGGTCATCCGCTCCATCATCATACTGTTGAACGCT | + |
Preference number: 2 (lower is better) Translates to: CCCFFLIREYCRFRA*MSVVIRSIIILLNA Trigger: AGCGTTCAACAGTATGATGATGGAGCGGATGACCACGGACATCAACGCCCTGAAGCGGCAGTACTCCCGAATTAAGAAGAAGCAACAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR-3UTR CCA 90 bp | CCACTTTACCCAGCAGATGGGCAAAGGTCCCATCTGGTCCCCACCATGGAACTTAGGAGCCAAAGGCTCTaGGAAACGAAGGTAAAGATA | + |
Preference number: 2 (lower is better) Translates to: PLYPADGQRSHLVPTMELRSQRL*ETKVKI Trigger: TATCTTTACCTTCGTTTCCCAGAGCCTTTGGCTCCT...AAGTTCCATGGTGGGGACCAGATGGGACCTTTGCCCATCTGCTGGGTAAAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR CAA 90 bp | TTGAGTATTAGTGACCTCCTGAGGACAGAAAGGTCAGGGAATGTGTaGTTTCAGGGATCCAAAAAGGCCCTGAGAAGGCCAGAAGAGGGC | + |
Preference number: 2 (lower is better) Translates to: LSISDLLRTERSGNV*FQGSKKALRRPEEG Trigger: GCCCTCTTCTGGCCTTCTCAGGGCCTTTTTGGATCCCTGAAACAACACATTCCCTGACCTTTCTGTCCTCAGGAGGTCACTAATACTCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR-3UTR TCA 90 bp | GTTCTTCCGGTGTTTGCATACAGTGTCCGACACGTGGGGAAGATGGACAGTCACCGTCAGTTCACATTGTaGTTACCTGGTACAGTGCAT | + |
Preference number: 2 (lower is better) Translates to: VLPVFAYSVRHVGKMDSHRQFTL*LPGTVH Trigger: ATGCACTGTACCAGGTAATCACAATGTGAACTGACG...GTGACTGTCCATCTTCCCCACGTGTCGGACACTGTATGCAAACACCGGAAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR-3UTR TCA 90 bp | CTTTGTCTTAATGTCTTCATAGGGGACGGGAGAGATTTTCCCTCCTGGGTGGCCCCATCATCATACTGTTaGACGCTGCATGGTACTCAC | + |
Preference number: 2 (lower is better) Translates to: LCLNVFIGDGRDFPSWVAPSSYC*TLHGTH Trigger: GTGAGTACCATGCAGCGTTCAACAGTATGATGATGG...GGCCACCCAGGAGGGAAAATCTCTCCCGTCCCCTATGAAGACATTAAGACAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR-3UTR CCA 90 bp | TTAATCTGCTTTTGGTACTTCTGCAGTTCAGGTGCCAGGAGCCCACTGAGCGGTATCTGGTCCCCACCATaGAACTTCCAATTCCCGTTT | + |
Preference number: 2 (lower is better) Translates to: LICFWYFCSSGARSPLSGIWSPP*NFQFPF Trigger: AAACGGGAATTGGAAGTTCCATGGTGGGGACCAGAT...ACCGCTCAGTGGGCTCCTGGCACCTGAACTGCAGAAGTACCAAAAGCAGATTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR-3UTR CCA 90 bp | GGCAAGGCTCAGAAGTCCGTCAGTTCACATTGTGATTACCTGGTACAGTGCATGACTTTACCCAGCAGATaGGCAAAGGTCCCATCTGGT | + |
Preference number: 2 (lower is better) Translates to: GKAQKSVSSHCDYLVQCMTLPSR*AKVPSG Trigger: ACCAGATGGGACCTTTGCCCATCTGCTGGGTAAAGT...CATGCACTGTACCAGGTAATCACAATGTGAACTGACGGACTTCTGAGCCTTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR-3UTR GCA 90 bp | GACGCACAAGATTTACTTAGTCACCAGAATCCACTTTACCCAGCAGATGGGCAATTGGAGCTGTGCATCTaGAGTGGAGAGAGAGCTGGT | + |
Preference number: 2 (lower is better) Translates to: DAQDLLSHQNPLYPADGQLELCI*SGERAG Trigger: ACCAGCTCTCTCTCCACTGCAGATGCACAGCTCCAA...TTGCCCATCTGCTGGGTAAAGTGGATTCTGGTGACTAAGTAAATCTTGTGCGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR-3UTR GCA 90 bp | CCACTTTACCCAGCAGATGGGCAAAGGTCCCATCTGGTCCCCACCATGGAACTTGTCGCTTCTTTAATCTaGTTTTGGTACTTCTGCAGT | + |
Preference number: 2 (lower is better) Translates to: PLYPADGQRSHLVPTMELVASLI*FWYFCS Trigger: ACTGCAGAAGTACCAAAAGCAGATTAAAGAAGCGAC...AAGTTCCATGGTGGGGACCAGATGGGACCTTTGCCCATCTGCTGGGTAAAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR-3UTR CCA 90 bp | GAACATGGGGGAAAGAGGGCCTTCTCCAGAGAAAGGCAGTGTTCAAGTAACAAAGAGCCTCCAGAAAGGTaGCAATCAGCAAACCGTTCA | + |
Preference number: 2 (lower is better) Translates to: EHGGKRAFSRERQCSSNKEPPER*QSANRS Trigger: TGAACGGTTTGCTGATTGCCACCTTTCTGGAGGCTC...TTTGTTACTTGAACACTGCCTTTCTCTGGAGAAGGCCCTCTTTCCCCCATGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR-3UTR CCA 90 bp | AGTGCACCTTGGGTTCCGTTTCTGCCGCGGCATCCCTTTGGTTCAGTTCCAAGGTCTTTAATCTGCTTTTaGTACTTCTGCAGTTCAGGT | + |
Preference number: 2 (lower is better) Translates to: SAPWVPFLPRHPFGSVPRSLICF*YFCSSG Trigger: ACCTGAACTGCAGAAGTACCAAAAGCAGATTAAAGA...CCTTGGAACTGAACCAAAGGGATGCCGCGGCAGAAACGGAACCCAAGGTGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR-3UTR CCA 90 bp | TCTGCTAATGATGGTGGAGACGGAGTGGAGAGCCCTTCATTTATCCAAAGGATAATGTTCAGAGGATGCTaGAGTTCCACACAGAGCCCA | + |
Preference number: 2 (lower is better) Translates to: SANDGGDGVESPSFIQRIMFRGC*SSTQSP Trigger: TGGGCTCTGTGTGGAACTCCAGCATCCTCTGAACAT...TATCCTTTGGATAAATGAAGGGCTCTCCACTCCGTCTCCACCATCATTAGCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR-3UTR TCA 90 bp | GACGCACAAGATTTACTTAGTCACCAGAATCCACTTTACCCAGCAGATGGGCAAGATGGTGCTCAGCTCTaGACCTCTCAGTTCATTCTT | + |
Preference number: 2 (lower is better) Translates to: DAQDLLSHQNPLYPADGQDGAQL*TSQFIL Trigger: AAGAATGAACTGAGAGGTTCAGAGCTGAGCACCATC...TTGCCCATCTGCTGGGTAAAGTGGATTCTGGTGACTAAGTAAATCTTGTGCGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064107.7 ENSMUST00000218111.2 |
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3UTR-3UTR TCA 90 bp | GCGATGTTGTTCGATCTGAGGGTCTGTTCCTCAGTCGCTTCTTTAATCTGCTTTGATGGTGCTCAGCTCTaGACCTCTCAGTTCATTCTT | + |
Preference number: 2 (lower is better) Translates to: AMLFDLRVCSSVASLICFDGAQL*TSQFIL Trigger: AAGAATGAACTGAGAGGTTCAGAGCTGAGCACCATC...AAAGCAGATTAAAGAAGCGACTGAGGAACAGACCCTCAGATCGAACAACATCGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR-3UTR TCA 90 bp | TTCTTCTTAATTCGGGAGTACTGCCGCTTCAGGGCGTTGATGTCCGTGGTCATCTGGCTGGAAACGGTGTaGTGTTATAGGTATACTTTT | + |
Preference number: 2 (lower is better) Translates to: FFLIREYCRFRALMSVVIWLETV*CYRYTF Trigger: AAAAGTATACCTATAACATCACACCGTTTCCAGCCA...GATGACCACGGACATCAACGCCCTGAAGCGGCAGTACTCCCGAATTAAGAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR-3UTR CCA 90 bp | CCACTTTACCCAGCAGATGGGCAAAGGTCCCATCTGGTCCCCACCATGGAACTTTCAGTTCATTCTTATTaGACAAAAGAAACAGGAAGG | + |
Preference number: 2 (lower is better) Translates to: PLYPADGQRSHLVPTMELSVHSY*TKETGR Trigger: CCTTCCTGTTTCTTTTGTCCAATAAGAATGAACTGA...AAGTTCCATGGTGGGGACCAGATGGGACCTTTGCCCATCTGCTGGGTAAAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064107.7 ENSMUST00000218111.2 |
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3UTR-3UTR CCA 90 bp | GGGGACGAGATACTAAGAGAACAGTTGATAGACAACCCCACCCAATTATCCATCCCATCTTGCATCCTTTaGGGTAAAACTACCATGTGG | + |
Preference number: 2 (lower is better) Translates to: GDEILREQLIDNPTQLSIPSCIL*GKTTMW Trigger: CCACATGGTAGTTTTACCCCAAAGGATGCAAGATGG...GATGGATAATTGGGTGGGGTTGTCTATCAACTGTTCTCTTAGTATCTCGTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR-3UTR TCA 90 bp | GGGGACGAGATACTAAGAGAACAGTTGATAGACAACCCCACCCAATTATCCATCGTGTGTGTGTGTGTGTaGTGCTTAATTGGAATGATC | + |
Preference number: 2 (lower is better) Translates to: GDEILREQLIDNPTQLSIVCVCV*CLIGMI Trigger: GATCATTCCAATTAAGCATCACACACACACACACAC...GATGGATAATTGGGTGGGGTTGTCTATCAACTGTTCTCTTAGTATCTCGTCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR-3UTR GCA 90 bp | CACACACACAAAAATATTCTTCCAGCTATTCGTTCAACCAATACTCGGCCCATAACCATGTTCAGAGGATaGTGGAGTTCCACACAGAGC | + |
Preference number: 2 (lower is better) Translates to: HTHKNILPAIRSTNTRPITMFRG*WSSTQS Trigger: GCTCTGTGTGGAACTCCAGCATCCTCTGAACATGGT...TATGGGCCGAGTATTGGTTGAACGAATAGCTGGAAGAATATTTTTGTGTGTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR-3UTR CCA 90 bp | CGGCTCTTTCTTAAGATATTGGGGGACGAGATACTAAGAGAACAGTTGATAGACATCTGGTCCCCACCATaGAACTTCCAATTCCCGTTT | + |
Preference number: 2 (lower is better) Translates to: RLFLKILGDEILREQLIDIWSPP*NFQFPF Trigger: AAACGGGAATTGGAAGTTCCATGGTGGGGACCAGAT...GTCTATCAACTGTTCTCTTAGTATCTCGTCCCCCAATATCTTAAGAAAGAGCCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR-3UTR CCA 90 bp | CGGCTCTTTCTTAAGATATTGGGGGACGAGATACTAAGAGAACAGTTGATAGACTTAGTTCTAGCAAGCTaGTGTTCGTTCATGCTTGAG | + |
Preference number: 2 (lower is better) Translates to: RLFLKILGDEILREQLIDLVLAS*CSFMLE Trigger: CTCAAGCATGAACGAACACCAGCTTGCTAGAACTAA...GTCTATCAACTGTTCTCTTAGTATCTCGTCCCCCAATATCTTAAGAAAGAGCCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR-3UTR CCA 90 bp | GACGCACAAGATTTACTTAGTCACCAGAATCCACTTTACCCAGCAGATGGGCAATCAGTTCATTCTTATTaGACAAAAGAAACAGGAAGG | + |
Preference number: 2 (lower is better) Translates to: DAQDLLSHQNPLYPADGQSVHSY*TKETGR Trigger: CCTTCCTGTTTCTTTTGTCCAATAAGAATGAACTGA...TTGCCCATCTGCTGGGTAAAGTGGATTCTGGTGACTAAGTAAATCTTGTGCGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064107.7 ENSMUST00000218111.2 |
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3UTR-3UTR TCA 90 bp | CACACACACAAAAATATTCTTCCAGCTATTCGTTCAACCAATACTCGGCCCATAATTGTAAAAGCCTTCTaGAACCAGATTTGGTTTCAG | + |
Preference number: 2 (lower is better) Translates to: HTHKNILPAIRSTNTRPIIVKAF*NQIWFQ Trigger: CTGAAACCAAATCTGGTTTCAGAAGGCTTTTACAAT...TATGGGCCGAGTATTGGTTGAACGAATAGCTGGAAGAATATTTTTGTGTGTGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR GCA 72 bp | GCTCCGGAGACTGCCCTTCGATCGTCCTCGGAGTGCTaGCGCCTCCATCACCATCACCGCTGCTGCCTTCAC | + |
Preference number: 3 (lower is better) Translates to: APETALRSSSEC*RLHHHHRCCLH Trigger: GTGAAGGCAGCAGCGGTGATGGTGATGGAGGCGGCAGCACTCCGAGGACGATCGAAGGGCAGTCTCCGGAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
||
3UTR GCA 72 bp | TCGACGTCAGCATCCCCAAACACTGGCTCCGGAGACTaGCCTTCGATCGTCCTCGGAGTGCTGCCGCCTCCA | + |
Preference number: 3 (lower is better) Translates to: STSASPNTGSGD*PSIVLGVLPPP Trigger: TGGAGGCGGCAGCACTCCGAGGACGATCGAAGGGCAGTCTCCGGAGCCAGTGTTTGGGGATGCTGACGTCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
||
3UTR GCA 72 bp | TCGGCTAACTCTGAAGCGTGCCGCTGGCAGGGGAAGTaGACCTTGGGTTCCGTTTCTGCCGCGGCATCCCTT | + |
Preference number: 3 (lower is better) Translates to: SANSEACRWQGK*TLGSVSAAASL Trigger: AAGGGATGCCGCGGCAGAAACGGAACCCAAGGTGCACTTCCCCTGCCAGCGGCACGCTTCAGAGTTAGCCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
||
3UTR CCA 72 bp | TCTCCAGGGGCATCGGCTAACTCTGAAGCGTGCCGCTaGCAGGGGAAGTGCACCTTGGGTTCCGTTTCTGCC | + |
Preference number: 3 (lower is better) Translates to: SPGASANSEACR*QGKCTLGSVSA Trigger: GGCAGAAACGGAACCCAAGGTGCACTTCCCCTGCCAGCGGCACGCTTCAGAGTTAGCCGATGCCCCTGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
||
3UTR TCA 72 bp | TTTGGTACTTCTGCAGTTCAGGTGCCAGGAGCCCACTaGGCGGTCCAAGGCACCCCACGGCACTCGCAACAG | + |
Preference number: 3 (lower is better) Translates to: FGTSAVQVPGAH*AVQGTPRHSQQ Trigger: CTGTTGCGAGTGCCGTGGGGTGCCTTGGACCGCTCAGTGGGCTCCTGGCACCTGAACTGCAGAAGTACCAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
||
3UTR GCA 72 bp | CCGCTGGCAGGGGAAGTGCACCTTGGGTTCCGTTTCTaGCGCGGCATCCCTTTGGTTCAGTTCCAAGGCTTC | + |
Preference number: 3 (lower is better) Translates to: PLAGEVHLGFRF*RGIPLVQFQGF Trigger: GAAGCCTTGGAACTGAACCAAAGGGATGCCGCGGCAGAAACGGAACCCAAGGTGCACTTCCCCTGCCAGCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
||
3UTR CCA 72 bp | AACTGCAGCCACGTCGACGTCAGCATCCCCAAACACTaGCTCCGGAGACTGCCCTTCGATCGTCCTCGGAGT | + |
Preference number: 3 (lower is better) Translates to: NCSHVDVSIPKH*LRRLPFDRPRS Trigger: ACTCCGAGGACGATCGAAGGGCAGTCTCCGGAGCCAGTGTTTGGGGATGCTGACGTCGACGTGGCTGCAGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
||
3UTR CCA 72 bp | ACTCTGAAGCGTGCCGCTGGCAGGGGAAGTGCACCTTaGGTTCCGTTTCTGCCGCGGCATCCCTTTGGTTCA | + |
Preference number: 3 (lower is better) Translates to: TLKRAAGRGSAP*VPFLPRHPFGS Trigger: TGAACCAAAGGGATGCCGCGGCAGAAACGGAACCCAAGGTGCACTTCCCCTGCCAGCGGCACGCTTCAGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
||
3UTR TCA 72 bp | CCGCCTCCATCACCATCACCGCTGCTGCCTTCACTGTaGGCTGTTACTGTACGACCGGAGGGAAACTCCTCG | + |
Preference number: 3 (lower is better) Translates to: PPPSPSPLLPSL*AVTVRPEGNSS Trigger: CGAGGAGTTTCCCTCCGGTCGTACAGTAACAGCTCACAGTGAAGGCAGCAGCGGTGATGGTGATGGAGGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
||
3UTR GCA 72 bp | ACGGTCTGCATGAGTTCATGGCTCTGTAGCAGATCCTaGTCCAGCATCTCCTGGGTGAGGCGCCCCATGGTG | + |
Preference number: 3 (lower is better) Translates to: TVCMSSWLCSRS*SSISWVRRPMV Trigger: CACCATGGGGCGCCTCACCCAGGAGATGCTGGAGCAGGATCTGCTACAGAGCCATGAACTCATGCAGACCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
||
3UTR GCA 72 bp | AGCTGTTACTGTACGACCGGAGGGAAACTCCTCGGCTaGCCCCAAGCTGCTGGCCTTACAGCCTTCACTCTG | + |
Preference number: 3 (lower is better) Translates to: SCYCTTGGKLLG*PQAAGLTAFTL Trigger: CAGAGTGAAGGCTGTAAGGCCAGCAGCTTGGGGGCAGCCGAGGAGTTTCCCTCCGGTCGTACAGTAACAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
||
3UTR CCA 72 bp | GACCGGAGGGAAACTCCTCGGCTGCCCCCAAGCTGCTaGCCTTACAGCCTTCACTCTGTTCTTCTATCAGCC | + |
Preference number: 3 (lower is better) Translates to: DRRETPRLPPSC*PYSLHSVLLSA Trigger: GGCTGATAGAAGAACAGAGTGAAGGCTGTAAGGCCAGCAGCTTGGGGGCAGCCGAGGAGTTTCCCTCCGGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
||
3UTR GCA 72 bp | CCCCAGAAGAAGGTGGTTGATCACGGGAGAACTATTTaGCTGCGATGGGAGGATGCTGGTCACCGGCCCTTT | + |
Preference number: 3 (lower is better) Translates to: PQKKVVDHGRTI*LRWEDAGHRPF Trigger: AAAGGGCCGGTGACCAGCATCCTCCCATCGCAGGCAAATAGTTCTCCCGTGATCAACCACCTTCTTCTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
||
3UTR GCA 72 bp | TACGACCGGAGGGAAACTCCTCGGCTGCCCCCAAGCTaGTGGCCTTACAGCCTTCACTCTGTTCTTCTATCA | + |
Preference number: 3 (lower is better) Translates to: YDRRETPRLPPS*WPYSLHSVLLS Trigger: TGATAGAAGAACAGAGTGAAGGCTGTAAGGCCAGCAGCTTGGGGGCAGCCGAGGAGTTTCCCTCCGGTCGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
||
3UTR CCA 72 bp | ATACGTATGATCTCTCCCTCCCTGCGTTCCTCCCTCTaGCCGCTTCTATTCAGGAGCCTGCTCTTCTGTCCC | + |
Preference number: 3 (lower is better) Translates to: IRMISPSLRSSL*PLLFRSLLFCP Trigger: GGGACAGAAGAGCAGGCTCCTGAATAGAAGCGGCCAGAGGGAGGAACGCAGGGAGGGAGAGATCATACGTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
||
3UTR CCA 72 bp | AAGGTGGTTGATCACGGGAGAACTATTTGCCTGCGATaGGAGGATGCTGGTCACCGGCCCTTTGTCTGCCCT | + |
Preference number: 3 (lower is better) Translates to: KVVDHGRTICLR*EDAGHRPFVCP Trigger: AGGGCAGACAAAGGGCCGGTGACCAGCATCCTCCCATCGCAGGCAAATAGTTCTCCCGTGATCAACCACCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
||
3UTR CCA 72 bp | ATAGGGGACGGGAGAGATTTTCCCTCCTGGGTGGCCTaGCACGTGGATCACTGCATTCTTGGCTGCTCTGTT | + |
Preference number: 3 (lower is better) Translates to: IGDGRDFPSWVA*HVDHCILGCSV Trigger: AACAGAGCAGCCAAGAATGCAGTGATCCACGTGCCAGGCCACCCAGGAGGGAAAATCTCTCCCGTCCCCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
||
3UTR-3UTR CAA 90 bp | CCACTTTACCCAGCAGATGGGCAAAGGTCCCATCTGGTCCCCACCATGGAACTTGTGCGGTGTTCTGGTTaGGAGCTGTGCATCTGCAGT | + |
Preference number: 3 (lower is better) Translates to: PLYPADGQRSHLVPTMELVRCSG*ELCICS Trigger: ACTGCAGATGCACAGCTCCAAACCAGAACACCGCAC...AAGTTCCATGGTGGGGACCAGATGGGACCTTTGCCCATCTGCTGGGTAAAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
||
3UTR GCA 72 bp | AGCTGCTGCTGTTGCTTCTTCTTAATTCGGGAGTACTaGCGCTTCAGGGCGTTGATGTCCGTGGTCATCCGC | + |
Preference number: 3 (lower is better) Translates to: SCCCCFFLIREY*RFRALMSVVIR Trigger: GCGGATGACCACGGACATCAACGCCCTGAAGCGGCAGTACTCCCGAATTAAGAAGAAGCAACAGCAGCAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
||
3UTR CCA 72 bp | GAGCTGGTAGCGATCAGAACCATGTTCAGAGGATGCTaGAGTTCCACACAGAGCCCATCGAGTCCTTGCGAG | + |
Preference number: 3 (lower is better) Translates to: ELVAIRTMFRGC*SSTQSPSSPCE Trigger: CTCGCAAGGACTCGATGGGCTCTGTGTGGAACTCCAGCATCCTCTGAACATGGTTCTGATCGCTACCAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
||
3UTR CCA 72 bp | TCACGGGAGAACTATTTGCCTGCGATGGGAGGATGCTaGTCACCGGCCCTTTGTCTGCCCTTATGTACACCT | + |
Preference number: 3 (lower is better) Translates to: SRENYLPAMGGC*SPALCLPLCTP Trigger: AGGTGTACATAAGGGCAGACAAAGGGCCGGTGACCAGCATCCTCCCATCGCAGGCAAATAGTTCTCCCGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
||
3UTR GCA 72 bp | GTCACTGTGCGGTGTTCTGGTTTGGAGCTGTGCATCTaGAGTGGAGAGAGAGCTGGTAGCGATCAGAACCAT | + |
Preference number: 3 (lower is better) Translates to: VTVRCSGLELCI*SGERAGSDQNH Trigger: ATGGTTCTGATCGCTACCAGCTCTCTCTCCACTGCAGATGCACAGCTCCAAACCAGAACACCGCACAGTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
||
3UTR GCA 72 bp | GTAACAGTCACTGTGCGGTGTTCTGGTTTGGAGCTGTaGATCTGCAGTGGAGAGAGAGCTGGTAGCGATCAG | + |
Preference number: 3 (lower is better) Translates to: VTVTVRCSGLEL*ICSGERAGSDQ Trigger: CTGATCGCTACCAGCTCTCTCTCCACTGCAGATGCACAGCTCCAAACCAGAACACCGCACAGTGACTGTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
||
3UTR GCA 72 bp | TTCTTTAATCTGCTTTTGGTACTTCTGCAGTTCAGGTaGCAGGAGCCCACTGAGCGGTCCAAGGCACCCCAC | + |
Preference number: 3 (lower is better) Translates to: FFNLLLVLLQFR*QEPTERSKAPH Trigger: GTGGGGTGCCTTGGACCGCTCAGTGGGCTCCTGGCACCTGAACTGCAGAAGTACCAAAAGCAGATTAAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
||
3UTR GCA 72 bp | AGAAGAAGGTGGTTGATCACGGGAGAACTATTTGCCTaGGATGGGAGGATGCTGGTCACCGGCCCTTTGTCT | + |
Preference number: 3 (lower is better) Translates to: RRRWLITGELFA*DGRMLVTGPLS Trigger: AGACAAAGGGCCGGTGACCAGCATCCTCCCATCGCAGGCAAATAGTTCTCCCGTGATCAACCACCTTCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
||
3UTR CCA 72 bp | CGGTGTTTGCATACAGTGTCCGACACGTGGGGAAGATaGACAGTCACAACTGCCCCTTTGTACATGCTGTGG | + |
Preference number: 3 (lower is better) Translates to: RCLHTVSDTWGR*TVTTAPLYMLW Trigger: CCACAGCATGTACAAAGGGGCAGTTGTGACTGTCCATCTTCCCCACGTGTCGGACACTGTATGCAAACACCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
||
3UTR CCA 72 bp | AAAGGGGCCATCGAATACACGGTCTGCATGAGTTCATaGCTCTGTAGCAGATCCTGCTCCAGCATCTCCTGG | + |
Preference number: 3 (lower is better) Translates to: KGAIEYTVCMSS*LCSRSCSSISW Trigger: CCAGGAGATGCTGGAGCAGGATCTGCTACAGAGCCATGAACTCATGCAGACCGTGTATTCGATGGCCCCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
||
3UTR CCA 72 bp | TGCATGGTACTCACTCCGACAGGAATTGATGGCTCCTaGGCTCAGCTCTGCGATGTTGTTCGATCTGAGGGT | + |
Preference number: 3 (lower is better) Translates to: CMVLTPTGIDGS*AQLCDVVRSEG Trigger: ACCCTCAGATCGAACAACATCGCAGAGCTGAGCCCAGGAGCCATCAATTCCTGTCGGAGTGAGTACCATGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
||
3UTR CCA 72 bp | TTTGAGGTGCTTCCCGGGAGAAGTTTGATGGCAGTCTaGTTTTCTCCAGGGGCATCGGCTAACTCTGAAGCG | + |
Preference number: 3 (lower is better) Translates to: FEVLPGRSLMAV*FSPGASANSEA Trigger: CGCTTCAGAGTTAGCCGATGCCCCTGGAGAAAACCAGACTGCCATCAAACTTCTCCCGGGAAGCACCTCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
||
3UTR CCA 72 bp | TCATCTGAGGGAAGTGCACGTTTGGGGTTCTTTCTGTaGGGCCATATAACCCCAAATTCCTGGCCGTGGCTG | + |
Preference number: 3 (lower is better) Translates to: SSEGSARLGFFL*GHITPNSWPWL Trigger: CAGCCACGGCCAGGAATTTGGGGTTATATGGCCCCACAGAAAGAACCCCAAACGTGCACTTCCCTCAGATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
||
3UTR-3UTR CAA 90 bp | AGGGAAACTCCTCGGCTGCCCCCAAGCTGCTGGCCTTACAGCCTTCACTCTGTTTCCATCATCATACTGTaGAACGCTGCATGGTACTCA | + |
Preference number: 3 (lower is better) Translates to: RETPRLPPSCWPYSLHSVSIIIL*NAAWYS Trigger: TGAGTACCATGCAGCGTTCAACAGTATGATGATGGA...AACAGAGTGAAGGCTGTAAGGCCAGCAGCTTGGGGGCAGCCGAGGAGTTTCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
||
3UTR GCA 72 bp | TTCTTATTGGACAAAAGAAACAGGAAGGGCGTAGCCTaGCACGTGAGTCTAGCCACTGAGCCACTTCGAGGC | + |
Preference number: 3 (lower is better) Translates to: FLLDKRNRKGVA*HVSLATEPLRG Trigger: GCCTCGAAGTGGCTCAGTGGCTAGACTCACGTGGCAGGCTACGCCCTTCCTGTTTCTTTTGTCCAATAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064107.7 ENSMUST00000218111.2 |
||
3UTR CCA 72 bp | ATCCACTTTACCCAGCAGATGGGCAAAGGTCCCATCTaGTCCCCACCATGGAACTTCCAATTCCCGTTTGGA | + |
Preference number: 3 (lower is better) Translates to: IHFTQQMGKGPI*SPPWNFQFPFG Trigger: TCCAAACGGGAATTGGAAGTTCCATGGTGGGGACCAGATGGGACCTTTGCCCATCTGCTGGGTAAAGTGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064107.7 ENSMUST00000218111.2 |
||
3UTR CCA 72 bp | GTCATCCGCTCCATCATCATACTGTTGAACGCTGCATaGTACTCACTCCGACAGGAATTGATGGCTCCTGGG | + |
Preference number: 3 (lower is better) Translates to: VIRSIIILLNAA*YSLRQELMAPG Trigger: CCCAGGAGCCATCAATTCCTGTCGGAGTGAGTACCATGCAGCGTTCAACAGTATGATGATGGAGCGGATGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
||
3UTR-3UTR CAA 90 bp | AGGGAAACTCCTCGGCTGCCCCCAAGCTGCTGGCCTTACAGCCTTCACTCTGTTTTCTTTAATCTGCTTTaGGTACTTCTGCAGTTCAGG | + |
Preference number: 3 (lower is better) Translates to: RETPRLPPSCWPYSLHSVFFNLL*VLLQFR Trigger: CCTGAACTGCAGAAGTACCAAAAGCAGATTAAAGAA...AACAGAGTGAAGGCTGTAAGGCCAGCAGCTTGGGGGCAGCCGAGGAGTTTCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
||
3UTR-3UTR CAA 90 bp | GGGCTGATGGTGCTCAGCTCTGAACCTCTCAGTTCATTCTTATTGGACAAAAGATCACTCCGACAGGAATaGATGGCTCCTGGGCTCAGC | + |
Preference number: 3 (lower is better) Translates to: GLMVLSSEPLSSFLLDKRSLRQE*MAPGLS Trigger: GCTGAGCCCAGGAGCCATCAATTCCTGTCGGAGTGA...TCTTTTGTCCAATAAGAATGAACTGAGAGGTTCAGAGCTGAGCACCATCAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
||
3UTR TCA 72 bp | CCACCATGGAACTTCCAATTCCCGTTTGGATGGGGCTaGTGGTGCTCAGCTCTGAACCTCTCAGTTCATTCT | + |
Preference number: 3 (lower is better) Translates to: PPWNFQFPFGWG*WCSALNLSVHS Trigger: AGAATGAACTGAGAGGTTCAGAGCTGAGCACCATCAGCCCCATCCAAACGGGAATTGGAAGTTCCATGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064107.7 ENSMUST00000218111.2 |
||
3UTR TCA 72 bp | GTCACTATCTCTGGCCTTACTGTGTCGCCCAGAAACTaGAGTGGGCTTAATCGTGGCTGGAAACGGTGTGAT | + |
Preference number: 3 (lower is better) Translates to: VTISGLTVSPRN*SGLNRGWKRCD Trigger: ATCACACCGTTTCCAGCCACGATTAAGCCCACTTCAGTTTCTGGGCGACACAGTAAGGCCAGAGATAGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
||
3UTR TCA 72 bp | TCTTCTATCAGCCCTACCGTGTCTCCGCAGCCTAGATaGCTCTTGGTCCTCGGCATGTTCTTTTTGTGGACT | + |
Preference number: 3 (lower is better) Translates to: SSISPTVSPQPR*LLVLGMFFLWT Trigger: AGTCCACAAAAAGAACATGCCGAGGACCAAGAGTCATCTAGGCTGCGGAGACACGGTAGGGCTGATAGAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
||
3UTR CCA 72 bp | AAGTTCTTCCGGTGTTTGCATACAGTGTCCGACACGTaGGGAAGATGGACAGTCACAACTGCCCCTTTGTAC | + |
Preference number: 3 (lower is better) Translates to: KFFRCLHTVSDT*GRWTVTTAPLY Trigger: GTACAAAGGGGCAGTTGTGACTGTCCATCTTCCCCACGTGTCGGACACTGTATGCAAACACCGGAAGAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
||
3UTR-3UTR CAA 90 bp | GTTCTTCCGGTGTTTGCATACAGTGTCCGACACGTGGGGAAGATGGACAGTCACAGGTCAGGGAATGTGTaGTTTCAGGGATCCAAAAAG | + |
Preference number: 3 (lower is better) Translates to: VLPVFAYSVRHVGKMDSHRSGNV*FQGSKK Trigger: CTTTTTGGATCCCTGAAACAACACATTCCCTGACCT...GTGACTGTCCATCTTCCCCACGTGTCGGACACTGTATGCAAACACCGGAAGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
||
3UTR-3UTR CAA 90 bp | GTTCTTCCGGTGTTTGCATACAGTGTCCGACACGTGGGGAAGATGGACAGTCACTCACTCAAACCAACATaGACGGCTTCAACAGAGTTC | + |
Preference number: 3 (lower is better) Translates to: VLPVFAYSVRHVGKMDSHSLKPT*TASTEF Trigger: GAACTCTGTTGAAGCCGTCAATGTTGGTTTGAGTGA...GTGACTGTCCATCTTCCCCACGTGTCGGACACTGTATGCAAACACCGGAAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
||
3UTR TCA 72 bp | GTGATCAAGCGGGATACAGGAGAGAGCGTTGAGAAATaGCTAGGAGGAAGGAACGCTAAGCTTCCTGCACAT | + |
Preference number: 3 (lower is better) Translates to: VIKRDTGESVEK*LGGRNAKLPAH Trigger: ATGTGCAGGAAGCTTAGCGTTCCTTCCTCCTAGTCATTTCTCAACGCTCTCTCCTGTATCCCGCTTGATCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
||
3UTR GCA 72 bp | TGCATAGTAGAGACAAGAGATGCTCTCCCTCTGATCTaGTGGGACCAGGGTAGGAGTGGAAAGACAGAAAGA | + |
Preference number: 3 (lower is better) Translates to: CIVETRDALPLI*WDQGRSGKTER Trigger: TCTTTCTGTCTTTCCACTCCTACCCTGGTCCCAGCAGATCAGAGGGAGAGCATCTCTTGTCTCTACTATGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
||
3UTR GCA 72 bp | CGGTGTGATGTTATAGGTATACTTTTCCCTCAACTCTaGCAACTGCGGGAACGGGAAAGGGGCCATCGAATA | + |
Preference number: 3 (lower is better) Translates to: RCDVIGILFPQL*QLRERERGHRI Trigger: TATTCGATGGCCCCTTTCCCGTTCCCGCAGTTGGCAGAGTTGAGGGAAAAGTATACCTATAACATCACACCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
||
3UTR CCA 72 bp | CCACAAAATTCAAGTAACAGTCACTGTGCGGTGTTCTaGTTTGGAGCTGTGCATCTGCAGTGGAGAGAGAGC | + |
Preference number: 3 (lower is better) Translates to: PQNSSNSHCAVF*FGAVHLQWRES Trigger: GCTCTCTCTCCACTGCAGATGCACAGCTCCAAACCAGAACACCGCACAGTGACTGTTACTTGAATTTTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
||
3UTR CCA 72 bp | CCTCCAAACACTAAGACCCTCAAGAGCCAGGGATCTTaGTGGAGAGAGAACCATTTTCTCTTCAAGTCAGTC | + |
Preference number: 3 (lower is better) Translates to: PPNTKTLKSQGS*WRENHFLFKSV Trigger: GACTGACTTGAAGAGAAAATGGTTCTCTCTCCACCAAGATCCCTGGCTCTTGAGGGTCTTAGTGTTTGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
||
3UTR TCA 72 bp | AGGAACGCTAAGCTTCCTGCACATTCAGACAGGAAATaGCTCCGCCACCACAACAGTGAGAATCTTTATGCA | + |
Preference number: 3 (lower is better) Translates to: RNAKLPAHSDRK*LRHHNSENLYA Trigger: TGCATAAAGATTCTCACTGTTGTGGTGGCGGAGTCATTTCCTGTCTGAATGTGCAGGAAGCTTAGCGTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
||
3UTR TCA 72 bp | TTCAGAAATAGCAAAGCAACTCACTCAAACCAACATTaGCGGCTTCAACAGAGTTCCTGGGAGGAGCCAAAG | + |
Preference number: 3 (lower is better) Translates to: FRNSKATHSNQH*RLQQSSWEEPK Trigger: CTTTGGCTCCTCCCAGGAACTCTGTTGAAGCCGTCAATGTTGGTTTGAGTGAGTTGCTTTGCTATTTCTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
||
3UTR TCA 72 bp | AAGTGGCAAGGCTCAGAAGTCCGTCAGTTCACATTGTaGTTACCTGGTACAGTGCATGCATGTTATCAGTAC | + |
Preference number: 3 (lower is better) Translates to: KWQGSEVRQFTL*LPGTVHACYQY Trigger: GTACTGATAACATGCATGCACTGTACCAGGTAATCACAATGTGAACTGACGGACTTCTGAGCCTTGCCACTT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
||
3UTR TCA 72 bp | AGATCTAGATCTTTTTGGAGAGGACTGAGGTGCAGTTaGCTTCCAGAAAAAGTGCTGAAAGGGTACAGGCAG | + |
Preference number: 3 (lower is better) Translates to: RSRSFWRGLRCS*LPEKVLKGYRQ Trigger: CTGCCTGTACCCTTTCAGCACTTTTTCTGGAAGTCAACTGCACCTCAGTCCTCTCCAAAAAGATCTAGATCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
||
3UTR GCA 72 bp | CAGAAAGGTGGCAATCAGCAAACCGTTCAGAGCAGTTaGTTAATGCATAGTCCACCTGTGTCTCTGCATATA | + |
Preference number: 3 (lower is better) Translates to: QKGGNQQTVQSS*LMHSPPVSLHI Trigger: TATATGCAGAGACACAGGTGGACTATGCATTAAGCAACTGCTCTGAACGGTTTGCTGATTGCCACCTTTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
||
3UTR GCA 72 bp | GGAAATAAACTGCAGTTATTAAGTTCTTCCGGTGTTTaGATACAGTGTCCGACACGTGGGGAAGATGGACAG | + |
Preference number: 3 (lower is better) Translates to: GNKLQLLSSSGV*IQCPTRGEDGQ Trigger: CTGTCCATCTTCCCCACGTGTCGGACACTGTATGCAAACACCGGAAGAACTTAATAACTGCAGTTTATTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
||
3UTR CCA 72 bp | AGGCTCAGAAGTCCGTCAGTTCACATTGTGATTACCTaGTACAGTGCATGCATGTTATCAGTACAGAGAGCT | + |
Preference number: 3 (lower is better) Translates to: RLRSPSVHIVIT*YSACMLSVQRA Trigger: AGCTCTCTGTACTGATAACATGCATGCACTGTACCAGGTAATCACAATGTGAACTGACGGACTTCTGAGCCT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
||
3UTR CCA 72 bp | CATGTTCTTTTTGTGGACTCGGATGTGAGTCCGCCATaGAGAGTTGAGCTTTGTCTTAATGTCTTCATAGGG | + |
Preference number: 3 (lower is better) Translates to: HVLFVDSDVSPP*RVELCLNVFIG Trigger: CCCTATGAAGACATTAAGACAAAGCTCAACTCTCCATGGCGGACTCACATCCGAGTCCACAAAAAGAACATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR TCA 72 bp | AATTCCCGTTTGGATGGGGCTGATGGTGCTCAGCTCTaGACCTCTCAGTTCATTCTTATTGGACAAAAGAAA | + |
Preference number: 3 (lower is better) Translates to: NSRLDGADGAQL*TSQFILIGQKK Trigger: TTTCTTTTGTCCAATAAGAATGAACTGAGAGGTTCAGAGCTGAGCACCATCAGCCCCATCCAAACGGGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064107.7 ENSMUST00000218111.2 |
||
3UTR TCA 72 bp | CAGCTTGTCGTAGAAGAAACACTGGATTATTTACCGTaGGTTACTGAAGTGCCACTTAACCTGTGTGGCTCA | + |
Preference number: 3 (lower is better) Translates to: QLVVEETLDYLP*VTEVPLNLCGS Trigger: TGAGCCACACAGGTTAAGTGGCACTTCAGTAACTCACGGTAAATAATCCAGTGTTTCTTCTACGACAAGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR TCA 72 bp | AATTTTCATGGTGAGGCAGTTTCACAACTCATTCTGTaGACACCATTCCGGGACTCTATACCAGCTAGAGAA | + |
Preference number: 3 (lower is better) Translates to: NFHGEAVSQLIL*TPFRDSIPARE Trigger: TTCTCTAGCTGGTATAGAGTCCCGGAATGGTGTTCACAGAATGAGTTGTGAAACTGCCTCACCATGAAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR CCA 72 bp | AGAAATTCTCTTCTTGTGCTTAACTTTGGGAAACAGTaGGTCTCATCATCTGGGGGTGGCATACAAAGTAAG | + |
Preference number: 3 (lower is better) Translates to: RNSLLVLNFGKQ*VSSSGGGIQSK Trigger: CTTACTTTGTATGCCACCCCCAGATGATGAGACCCACTGTTTCCCAAAGTTAAGCACAAGAAGAGAATTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR TCA 72 bp | ACATTCAGACAGGAAATGACTCCGCCACCACAACAGTaGGAATCTTTATGCATATATCTCTGTGATCAGTAC | + |
Preference number: 3 (lower is better) Translates to: TFRQEMTPPPQQ*ESLCIYLCDQY Trigger: GTACTGATCACAGAGATATATGCATAAAGATTCTCACTGTTGTGGTGGCGGAGTCATTTCCTGTCTGAATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR CCA 72 bp | TGTAACAACTTACCAGCTATTCCATCTTGCATCCTTTaGGGTAAAACTACCATGTGGGGGATTAAATGTGTC | + |
Preference number: 3 (lower is better) Translates to: CNNLPAIPSCIL*GKTTMWGIKCV Trigger: GACACATTTAATCCCCCACATGGTAGTTTTACCCCAAAGGATGCAAGATGGAATAGCTGGTAAGTTGTTACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR CAA 72 bp | AACTCTGAAGCGTGCCGCTGGCAGGGGAAGTGCACCTaGGGTTCCGTTTCTGCCGCGGCATCCCTTTGGTTC | + |
Preference number: 4 (lower is better) Translates to: NSEACRWQGKCT*GSVSAAASLWF Trigger: GAACCAAAGGGATGCCGCGGCAGAAACGGAACCCAAGGTGCACTTCCCCTGCCAGCGGCACGCTTCAGAGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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CDS-3UTR TCA 90 bp | AATCCACTTTACCCAGCAGATGGGCAAAGGTCCCATCTGGTCCCCACCATGGAAGTGCCAGGAGCCCACTaGGCGGTCCAAGGCACCCCA | + |
Preference number: 4 (lower is better) Translates to: NPLYPADGQRSHLVPTMEVPGAH*AVQGTP Trigger: TGGGGTGCCTTGGACCGCTCAGTGGGCTCCTGGCAC...TTCCATGGTGGGGACCAGATGGGACCTTTGCCCATCTGCTGGGTAAAGTGGATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
||
CDS-3UTR TCA 90 bp | CCAAGGCACCCCACGGCACTCGCAACAGCATCCTCATCATCCGGGCCGTTCTCAGCGACACCCTCAGGATaGTCTCTGAACCTTCGAAGN | + |
Preference number: 4 (lower is better) Translates to: PRHPTALATASSSSGPFSATPSG*SLNLRX Trigger: NCTTCGAAGGTTCAGAGATCATCCTGAGGGTGTCGC...TGAGAACGGCCCGGATGATGAGGATGCTGTTGCGAGTGCCGTGGGGTGCCTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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CDS-3UTR CCA 90 bp | ACAGTCACTGTGCGGTGTTCTGGTTTGGAGCTGTGCATCTGCAGTGGAGAGAGAGCACATTGCTCAGGATaGTGCCCACGCCACCGCCGC | + |
Preference number: 4 (lower is better) Translates to: TVTVRCSGLELCICSGERAHCSG*CPRHRR Trigger: GCGGCGGTGGCGTGGGCACCATCCTGAGCAATGTGC...TCTCTCTCCACTGCAGATGCACAGCTCCAAACCAGAACACCGCACAGTGACTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR CCA 90 bp | CCTCCCTCTGGCCGCTTCTATTCAGGAGCCTGCTCTTCTGTCCCCTTCTGGGCACCAAATTCCTGGCCGTaGCTGACTTTCGCAGTGGCT | + |
Preference number: 4 (lower is better) Translates to: PPSGRFYSGACSSVPFWAPNSWP*LTFAVA Trigger: AGCCACTGCGAAAGTCAGCCACGGCCAGGAATTTGG...TGCCCAGAAGGGGACAGAAGAGCAGGCTCCTGAATAGAAGCGGCCAGAGGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR TCA 90 bp | GGCAAGGCTCAGAAGTCCGTCAGTTCACATTGTGATTACCTGGTACAGTGCATGCCAGCATCTCCTGGGTaGGGCGCCCCATGGTGCCGT | + |
Preference number: 4 (lower is better) Translates to: GKAQKSVSSHCDYLVQCMPASPG*GAPWCR Trigger: ACGGCACCATGGGGCGCCTCACCCAGGAGATGCTGG...CATGCACTGTACCAGGTAATCACAATGTGAACTGACGGACTTCTGAGCCTTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR GCA 90 bp | ACACCATATACGTATGATCTCTCCCTCCCTGCGTTCCTCCCTCTGGCCGCTTCTCTGCTCTCCCAGCTTTaGCCAGATGGCCAGCGACAC | + |
Preference number: 4 (lower is better) Translates to: TPYTYDLSLPAFLPLAASLLSQL*PDGQRH Trigger: GTGTCGCTGGCCATCTGGGCAAAGCTGGGAGAGCAG...AGAAGCGGCCAGAGGGAGGAACGCAGGGAGGGAGAGATCATACGTATATGGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR GCA 90 bp | ACACCATATACGTATGATCTCTCCCTCCCTGCGTTCCTCCCTCTGGCCGCTTCTCTCAACTCTGCCAACTaGGGGAACGGGAAAGGGGCC | + |
Preference number: 4 (lower is better) Translates to: TPYTYDLSLPAFLPLAASLNSAN*GNGKGA Trigger: GGCCCCTTTCCCGTTCCCGCAGTTGGCAGAGTTGAG...AGAAGCGGCCAGAGGGAGGAACGCAGGGAGGGAGAGATCATACGTATATGGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR CCA 90 bp | CCACTTTACCCAGCAGATGGGCAAAGGTCCCATCTGGTCCCCACCATGGAACTTGCGATGGGAGGATGCTaGTCACCGGCCCTTTGTCTG | + |
Preference number: 4 (lower is better) Translates to: PLYPADGQRSHLVPTMELAMGGC*SPALCL Trigger: CAGACAAAGGGCCGGTGACCAGCATCCTCCCATCGC...AAGTTCCATGGTGGGGACCAGATGGGACCTTTGCCCATCTGCTGGGTAAAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR CCA 90 bp | CTGTGTCGCCCAGAAACTGAAGTGGGCTTAATCGTGGCTGGAAACGGTGTGATGCCAGCTTTGCCCAGATaGCCAGCGACACCCTCAGGA | + |
Preference number: 4 (lower is better) Translates to: LCRPETEVGLIVAGNGVMPALPR*PATPSG Trigger: TCCTGAGGGTGTCGCTGGCCATCTGGGCAAAGCTGG...CATCACACCGTTTCCAGCCACGATTAAGCCCACTTCAGTTTCTGGGCGACACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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CDS-3UTR CCA 90 bp | ACAGTCACTGTGCGGTGTTCTGGTTTGGAGCTGTGCATCTGCAGTGGAGAGAGACCCTCCTGGGTGGCCTaGCACGTGGATCACTGCATT | + |
Preference number: 4 (lower is better) Translates to: TVTVRCSGLELCICSGERPSWVA*HVDHCI Trigger: AATGCAGTGATCCACGTGCCAGGCCACCCAGGAGGG...TCTCTCTCCACTGCAGATGCACAGCTCCAAACCAGAACACCGCACAGTGACTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR TCA 90 bp | CCTCCCTCTGGCCGCTTCTATTCAGGAGCCTGCTCTTCTGTCCCCTTCTGGGCACCATCATCATACTGTTaGACGCTGCATGGTACTCAC | + |
Preference number: 4 (lower is better) Translates to: PPSGRFYSGACSSVPFWAPSSYC*TLHGTH Trigger: GTGAGTACCATGCAGCGTTCAACAGTATGATGATGG...TGCCCAGAAGGGGACAGAAGAGCAGGCTCCTGAATAGAAGCGGCCAGAGGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR GCA 90 bp | AGAAGGCCAGAAGAGGGCTTAACAGTCTACAGGTTGTCTTTTCTAAAGAGCTCACTCCCGGCTCCAAGGTaGAGAGCAACCGGGGCGCGG | + |
Preference number: 4 (lower is better) Translates to: RRPEEGLTVYRLSFLKSSLPAPR*RATGAR Trigger: CCGCGCCCCGGTTGCTCTGCACCTTGGAGCCGGGAG...TGAGCTCTTTAGAAAAGACAACCTGTAGACTGTTAAGCCCTCTTCTGGCCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR TCA 90 bp | ACAGTCACTGTGCGGTGTTCTGGTTTGGAGCTGTGCATCTGCAGTGGAGAGAGATGCAGCTGCGCTTCTTaGGCACATTGCTCAGGATGG | + |
Preference number: 4 (lower is better) Translates to: TVTVRCSGLELCICSGERCSCAS*AHCSGW Trigger: CCATCCTGAGCAATGTGCTCAAGAAGCGCAGCTGCA...TCTCTCTCCACTGCAGATGCACAGCTCCAAACCAGAACACCGCACAGTGACTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR TCA 90 bp | AATCCACTTTACCCAGCAGATGGGCAAAGGTCCCATCTGGTCCCCACCATGGAACTTTGGTATCCCCGTTaGCAGTCTGGCCACAGCCTT | + |
Preference number: 4 (lower is better) Translates to: NPLYPADGQRSHLVPTMELWYPR*QSGHSL Trigger: AAGGCTGTGGCCAGACTGTCAACGGGGATACCAAAG...TTCCATGGTGGGGACCAGATGGGACCTTTGCCCATCTGCTGGGTAAAGTGGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR TCA 90 bp | GAGACAAGAGATGCTCTCCCTCTGATCTGCTGGGACCAGGGTAGGAGTGGAAAGGCGACACCCTCAGGATaGTCTCTGAACCTTCGAAGA | + |
Preference number: 4 (lower is better) Translates to: ETRDALPLICWDQGRSGKATPSG*SLNLRR Trigger: TCTTCGAAGGTTCAGAGATCATCCTGAGGGTGTCGC...CTTTCCACTCCTACCCTGGTCCCAGCAGATCAGAGGGAGAGCATCTCTTGTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR TCA 90 bp | AATCCACTTTACCCAGCAGATGGGCAAAGGTCCCATCTGGTCCCCACCATGGAATTGTGGACTCGGATGTaGGTCCGCCATGGAGAGTTG | + |
Preference number: 4 (lower is better) Translates to: NPLYPADGQRSHLVPTMELWTRM*VRHGEL Trigger: CAACTCTCCATGGCGGACTCACATCCGAGTCCACAA...TTCCATGGTGGGGACCAGATGGGACCTTTGCCCATCTGCTGGGTAAAGTGGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR TCA 90 bp | ACAGTCACTGTGCGGTGTTCTGGTTTGGAGCTGTGCATCTGCAGTGGAGAGAGAGAAGATGGGGGTTTTTaGGGTGCTTCCCGGGAGAAG | + |
Preference number: 4 (lower is better) Translates to: TVTVRCSGLELCICSGEREDGGF*GASREK Trigger: CTTCTCCCGGGAAGCACCTCAAAAACCCCCATCTTC...TCTCTCTCCACTGCAGATGCACAGCTCCAAACCAGAACACCGCACAGTGACTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR GCA 90 bp | GGGGACGAGATACTAAGAGAACAGTTGATAGACAACCCCACCCAATTATCCATCCATTGCTCAGGATGGTaGCCACGCCACCGCCGCCCT | + |
Preference number: 4 (lower is better) Translates to: GDEILREQLIDNPTQLSIHCSGW*PRHRRP Trigger: AGGGCGGCGGTGGCGTGGGCACCATCCTGAGCAATG...GATGGATAATTGGGTGGGGTTGTCTATCAACTGTTCTCTTAGTATCTCGTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR GCA 90 bp | GGCAAGGCTCAGAAGTCCGTCAGTTCACATTGTGATTACCTGGTACAGTGCATGCTTCTGCAGTTCAGGTaGCAGGAGCCCACTGAGCGG | + |
Preference number: 4 (lower is better) Translates to: GKAQKSVSSHCDYLVQCMLLQFR*QEPTER Trigger: CCGCTCAGTGGGCTCCTGGCACCTGAACTGCAGAAG...CATGCACTGTACCAGGTAATCACAATGTGAACTGACGGACTTCTGAGCCTTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR GCA 90 bp | CCACTTTACCCAGCAGATGGGCAAAGGTCCCATCTGGTCCCCACCATGGAACTTGGAGAACTATTTGCCTaGGATGGGAGGATGCTGGTC | + |
Preference number: 4 (lower is better) Translates to: PLYPADGQRSHLVPTMELGELFA*DGRMLV Trigger: GACCAGCATCCTCCCATCGCAGGCAAATAGTTCTCC...AAGTTCCATGGTGGGGACCAGATGGGACCTTTGCCCATCTGCTGGGTAAAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR CCA 90 bp | ACGTATGATCTCTCCCTCCCTGCGTTCCTCCCTCTGGCCGCTTCTATTCAGGAGATAACCCCAAATTCCTaGCCGTGGCTGACTTTCGCA | + |
Preference number: 4 (lower is better) Translates to: TYDLSLPAFLPLAASIQEITPNS*PWLTFA Trigger: TGCGAAAGTCAGCCACGGCCAGGAATTTGGGGTTAT...CTCCTGAATAGAAGCGGCCAGAGGGAGGAACGCAGGGAGGGAGAGATCATACGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR CAA 72 bp | CAGGAATTGATGGCTCCTGGGCTCAGCTCTGCGATGTaGTTCGATCTGAGGGTCTGTTCCTCAGTCGCTTCT | + |
Preference number: 4 (lower is better) Translates to: QELMAPGLSSAM*FDLRVCSSVAS Trigger: AGAAGCGACTGAGGAACAGACCCTCAGATCGAACAACATCGCAGAGCTGAGCCCAGGAGCCATCAATTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR CAA 72 bp | CTGTTGAACGCTGCATGGTACTCACTCCGACAGGAATaGATGGCTCCTGGGCTCAGCTCTGCGATGTTGTTC | + |
Preference number: 4 (lower is better) Translates to: LLNAAWYSLRQE*MAPGLSSAMLF Trigger: GAACAACATCGCAGAGCTGAGCCCAGGAGCCATCAATTCCTGTCGGAGTGAGTACCATGCAGCGTTCAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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CDS-3UTR GCA 90 bp | CCTCCCTCTGGCCGCTTCTATTCAGGAGCCTGCTCTTCTGTCCCCTTCTGGGCACATATCCACAGACAGTaGCCGGAGATTATTGACAAA | + |
Preference number: 4 (lower is better) Translates to: PPSGRFYSGACSSVPFWAHIHRQ*PEIIDK Trigger: TTTGTCAATAATCTCCGGGCACTGTCTGTGGATATG...TGCCCAGAAGGGGACAGAAGAGCAGGCTCCTGAATAGAAGCGGCCAGAGGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR GCA 90 bp | CATACTGTTGAACGCTGCATGGTACTCACTCCGACAGGAATTGATGGCTCCTGGCTATTCTCCCAGCTTTaGCCAGATGGCCAGCGACAC | + |
Preference number: 4 (lower is better) Translates to: HTVERCMVLTPTGIDGSWLFSQL*PDGQRH Trigger: GTGTCGCTGGCCATCTGGGCAAAGCTGGGAGAATAG...CCAGGAGCCATCAATTCCTGTCGGAGTGAGTACCATGCAGCGTTCAACAGTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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CDS-3UTR CCA 90 bp | GAGACAAGAGATGCTCTCCCTCTGATCTGCTGGGACCAGGGTAGGAGTGGAAAGCGATTTGAATTCCCATaGAGTCGTCATCCGGGTTGC | + |
Preference number: 4 (lower is better) Translates to: ETRDALPLICWDQGRSGKRFEFP*SRHPGC Trigger: GCAACCCGGATGACGACTCCATGGGAATTCAAATCG...CTTTCCACTCCTACCCTGGTCCCAGCAGATCAGAGGGAGAGCATCTCTTGTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR CCA 90 bp | GGAGAGAGAGCTGGTAGCGATCAGAACCATGTTCAGAGGATGCTGGAGTTCCACGGAATTGATGGCTCCTaGGCTCAGCTCTGCGATGTT | + |
Preference number: 4 (lower is better) Translates to: GERAGSDQNHVQRMLEFHGIDGS*AQLCDV Trigger: AACATCGCAGAGCTGAGCCCAGGAGCCATCAATTCC...GTGGAACTCCAGCATCCTCTGAACATGGTTCTGATCGCTACCAGCTCTCTCTCC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR TCA 90 bp | GGCAAGGCTCAGAAGTCCGTCAGTTCACATTGTGATTACCTGGTACAGTGCATGGCCCTTATGTACACCTaGTGGAGCTGCTGCTGTTGC | + |
Preference number: 4 (lower is better) Translates to: GKAQKSVSSHCDYLVQCMALMYT*WSCCCC Trigger: GCAACAGCAGCAGCTCCATCAGGTGTACATAAGGGC...CATGCACTGTACCAGGTAATCACAATGTGAACTGACGGACTTCTGAGCCTTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR GCA 90 bp | GTTCTTCCGGTGTTTGCATACAGTGTCCGACACGTGGGGAAGATGGACAGTCACTCGCAACATTCTATCTaGTCTCCCAGCTTTGCCCAG | + |
Preference number: 4 (lower is better) Translates to: VLPVFAYSVRHVGKMDSHSQHSI*SPSFAQ Trigger: CTGGGCAAAGCTGGGAGAGCAGATAGAATGTTGCGA...GTGACTGTCCATCTTCCCCACGTGTCGGACACTGTATGCAAACACCGGAAGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR GCA 90 bp | GAACTTCCAATTCCCGTTTGGATGGGGCTGATGGTGCTCAGCTCTGAACCTCTCTGCTTTTGGTACTTCTaGAGTTCAGGTGCCAGGAGC | + |
Preference number: 4 (lower is better) Translates to: ELPIPVWMGLMVLSSEPLCFWYF*SSGARS Trigger: GCTCCTGGCACCTGAACTGCAGAAGTACCAAAAGCA...GAGAGGTTCAGAGCTGAGCACCATCAGCCCCATCCAAACGGGAATTGGAAGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR CCA 90 bp | AACCACAAAATTCAAGTAACAGTCACTGTGCGGTGTTCTGGTTTGGAGCTGTGCCCAGCTTTGCCCAGATaGCCAGCGACACCCTCAGGA | + |
Preference number: 4 (lower is better) Translates to: NHKIQVTVTVRCSGLELCPALPR*PATPSG Trigger: TCCTGAGGGTGTCGCTGGCCATCTGGGCAAAGCTGG...GCACAGCTCCAAACCAGAACACCGCACAGTGACTGTTACTTGAATTTTGTGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR CCA 90 bp | ACACCATATACGTATGATCTCTCCCTCCCTGCGTTCCTCCCTCTGGCCGCTTCTGATGTGAGTCCGCCATaGAGAGTTGAGCTTTGTCTT | + |
Preference number: 4 (lower is better) Translates to: TPYTYDLSLPAFLPLAASDVSPP*RVELCL Trigger: AAGACAAAGCTCAACTCTCCATGGCGGACTCACATC...AGAAGCGGCCAGAGGGAGGAACGCAGGGAGGGAGAGATCATACGTATATGGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR GCA 90 bp | GACGCACAAGATTTACTTAGTCACCAGAATCCACTTTACCCAGCAGATGGGCAACACCCTGTCTTGCTCTaGCTCCTGGCCACAGTAGGA | + |
Preference number: 4 (lower is better) Translates to: DAQDLLSHQNPLYPADGQHPVLL*LLATVG Trigger: TCCTACTGTGGCCAGGAGGCAGAGCAAGACAGGGTG...TTGCCCATCTGCTGGGTAAAGTGGATTCTGGTGACTAAGTAAATCTTGTGCGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR CCA 90 bp | AACCACAAAATTCAAGTAACAGTCACTGTGCGGTGTTCTGGTTTGGAGCTGTGCAGCATCCCCAAACACTaGCTCCGGAGACTGCCCTTC | + |
Preference number: 4 (lower is better) Translates to: NHKIQVTVTVRCSGLELCSIPKH*LRRLPF Trigger: GAAGGGCAGTCTCCGGAGCCAGTGTTTGGGGATGCT...GCACAGCTCCAAACCAGAACACCGCACAGTGACTGTTACTTGAATTTTGTGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR CAA 72 bp | AGTGACCTCCTGAGGACAGAAAGGTCAGGGAATGTGTaGTTTCAGGGATCCAAAAAGGCCCTGAGAAGGCCA | + |
Preference number: 4 (lower is better) Translates to: SDLLRTERSGNV*FQGSKKALRRP Trigger: TGGCCTTCTCAGGGCCTTTTTGGATCCCTGAAACAACACATTCCCTGACCTTTCTGTCCTCAGGAGGTCACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR CAA 72 bp | TTCTTCTTAATTCGGGAGTACTGCCGCTTCAGGGCGTaGATGTCCGTGGTCATCCGCTCCATCATCATACTG | + |
Preference number: 4 (lower is better) Translates to: FFLIREYCRFRA*MSVVIRSIIIL Trigger: CAGTATGATGATGGAGCGGATGACCACGGACATCAACGCCCTGAAGCGGCAGTACTCCCGAATTAAGAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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3UTR CAA 72 bp | GTCTGCCCTTATGTACACCTGATGGAGCTGCTGCTGTaGCTTCTTCTTAATTCGGGAGTACTGCCGCTTCAG | + |
Preference number: 4 (lower is better) Translates to: VCPYVHLMELLL*LLLNSGVLPLQ Trigger: CTGAAGCGGCAGTACTCCCGAATTAAGAAGAAGCAACAGCAGCAGCTCCATCAGGTGTACATAAGGGCAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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CDS-3UTR TCA 90 bp | GAGATACTAAGAGAACAGTTGATAGACAACCCCACCCAATTATCCATCTCTCCCAAGCCCCTGCTCATCTaGGGGAAGTGCACGTTTGGG | + |
Preference number: 4 (lower is better) Translates to: EILREQLIDNPTQLSISPKPLLI*GKCTFG Trigger: CCCAAACGTGCACTTCCCTCAGATGAGCAGGGGCTT...GGGAGAGATGGATAATTGGGTGGGGTTGTCTATCAACTGTTCTCTTAGTATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR GCA 90 bp | GTTTGGATGGGGCTGATGGTGCTCAGCTCTGAACCTCTCAGTTCATTCTTATTGCTTTTCCCTCAACTCTaGCAACTGCGGGAACGGGAA | + |
Preference number: 4 (lower is better) Translates to: VWMGLMVLSSEPLSSFLLLFPQL*QLRERE Trigger: TTCCCGTTCCCGCAGTTGGCAGAGTTGAGGGAAAAG...CAATAAGAATGAACTGAGAGGTTCAGAGCTGAGCACCATCAGCCCCATCCAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR GCA 90 bp | CTTGGTGGAGAGAGAACCATTTTCTCTTCAAGTCAGTCATGGGGTGTGTGTGTGCACGGGAGAACTATTTaGCTGCGATGGGAGGATGCT | + |
Preference number: 4 (lower is better) Translates to: LGGERTIFSSSQSWGVCVHGRTI*LRWEDA Trigger: AGCATCCTCCCATCGCAGGCAAATAGTTCTCCCGTG...CACACACACACCCCATGACTGACTTGAAGAGAAAATGGTTCTCTCTCCACCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR GCA 90 bp | GAAACGAAGGTAAAGATATCACTGTATTCTGCTAATGATGGTGGAGACGGAGTGACTGGCTCCGGAGACTaGCCTTCGATCGTCCTCGGA | + |
Preference number: 4 (lower is better) Translates to: ETKVKISLYSANDGGDGVTGSGD*PSIVLG Trigger: TCCGAGGACGATCGAAGGGCAGTCTCCGGAGCCAGT...CACTCCGTCTCCACCATCATTAGCAGAATACAGTGATATCTTTACCTTCGTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR CCA 90 bp | ACGTATGATCTCTCCCTCCCTGCGTTCCTCCCTCTGGCCGCTTCTATTCAGGAGTTTTGTCCCAGTCGATaGCTATACTGTGCAGATAAT | + |
Preference number: 4 (lower is better) Translates to: TYDLSLPAFLPLAASIQEFCPSR*LYCADN Trigger: ATTATCTGCACAGTATAGCCATCGACTGGGACAAAA...CTCCTGAATAGAAGCGGCCAGAGGGAGGAACGCAGGGAGGGAGAGATCATACGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR CCA 90 bp | GAACTAGACAAAAGAGAGAGAGAGAGAGAACATTGTTCCAAACAGTTACAGCCATGCTCCAGCATCTCCTaGGTGAGGCGCCCCATGGTG | + |
Preference number: 4 (lower is better) Translates to: ELDKREREREHCSKQLQPCSSIS*VRRPMV Trigger: CACCATGGGGCGCCTCACCCAGGAGATGCTGGAGCA...TGGCTGTAACTGTTTGGAACAATGTTCTCTCTCTCTCTCTCTTTTGTCTAGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR CCA 90 bp | GTTTGGATGGGGCTGATGGTGCTCAGCTCTGAACCTCTCAGTTCATTCTTATTGCATCGTCACTATCTCTaGCCTTACTGTGTCGCCCAG | + |
Preference number: 4 (lower is better) Translates to: VWMGLMVLSSEPLSSFLLHRHYL*PYCVAQ Trigger: CTGGGCGACACAGTAAGGCCAGAGATAGTGACGATG...CAATAAGAATGAACTGAGAGGTTCAGAGCTGAGCACCATCAGCCCCATCCAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR CCA 90 bp | AACCACAAAATTCAAGTAACAGTCACTGTGCGGTGTTCTGGTTTGGAGCTGTGCATTTTCCCTCCTGGGTaGCCTGGCACGTGGATCACT | + |
Preference number: 4 (lower is better) Translates to: NHKIQVTVTVRCSGLELCIFPPG*PGTWIT Trigger: AGTGATCCACGTGCCAGGCCACCCAGGAGGGAAAAT...GCACAGCTCCAAACCAGAACACCGCACAGTGACTGTTACTTGAATTTTGTGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR CCA 90 bp | AACCACAAAATTCAAGTAACAGTCACTGTGCGGTGTTCTGGTTTGGAGCTGTGCAGGGAAGTGCACGTTTaGGGTTCTTTCTGTGGGGCC | + |
Preference number: 4 (lower is better) Translates to: NHKIQVTVTVRCSGLELCREVHV*GSFCGA Trigger: GGCCCCACAGAAAGAACCCCAAACGTGCACTTCCCT...GCACAGCTCCAAACCAGAACACCGCACAGTGACTGTTACTTGAATTTTGTGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR CAA 72 bp | TTGATGTCCGTGGTCATCCGCTCCATCATCATACTGTaGAACGCTGCATGGTACTCACTCCGACAGGAATTG | + |
Preference number: 4 (lower is better) Translates to: LMSVVIRSIIIL*NAAWYSLRQEL Trigger: CAATTCCTGTCGGAGTGAGTACCATGCAGCGTTCAACAGTATGATGATGGAGCGGATGACCACGGACATCAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218111.2 |
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CDS-3UTR TCA 90 bp | TTTCTTAAGATATTGGGGGACGAGATACTAAGAGAACAGTTGATAGACAACCCCGGGCAGCCAGGATGTTaGAGCCTTGGCAGTACCCGA | + |
Preference number: 4 (lower is better) Translates to: FLKILGDEILREQLIDNPGQPGC*SLGSTR Trigger: TCGGGTACTGCCAAGGCTTCAACATCCTGGCTGCCC...GGGGTTGTCTATCAACTGTTCTCTTAGTATCTCGTCCCCCAATATCTTAAGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR GCA 90 bp | CACACACACAAAAATATTCTTCCAGCTATTCGTTCAACCAATACTCGGCCCATAGCGCGTCCCCCTCGTTaGCCTCCATCACTTCCAGAA | + |
Preference number: 4 (lower is better) Translates to: HTHKNILPAIRSTNTRPIARPPR*PPSLPE Trigger: TTCTGGAAGTGATGGAGGGCAACGAGGGGGACGCGC...TATGGGCCGAGTATTGGTTGAACGAATAGCTGGAAGAATATTTTTGTGTGTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR GCA 90 bp | GTTTGGATGGGGCTGATGGTGCTCAGCTCTGAACCTCTCAGTTCATTCTTATTGTGGCACGTGGATCACTaGATTCTTGGCTGCTCTGTT | + |
Preference number: 4 (lower is better) Translates to: VWMGLMVLSSEPLSSFLLWHVDH*ILGCSV Trigger: AACAGAGCAGCCAAGAATGCAGTGATCCACGTGCCA...CAATAAGAATGAACTGAGAGGTTCAGAGCTGAGCACCATCAGCCCCATCCAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR CAA 72 bp | ATGGTGCTCAGCTCTGAACCTCTCAGTTCATTCTTATaGGACAAAAGAAACAGGAAGGGCGTAGCCTGCCAC | + |
Preference number: 4 (lower is better) Translates to: MVLSSEPLSSFL*DKRNRKGVACH Trigger: GTGGCAGGCTACGCCCTTCCTGTTTCTTTTGTCCAATAAGAATGAACTGAGAGGTTCAGAGCTGAGCACCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064107.7 ENSMUST00000218111.2 |
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CDS-3UTR GCA 90 bp | GCACGGACAAAGAGCAATAGACCAGCTTGTCGTAGAAGAAACACTGGATTATTTCTCTGTAGCAGATCCTaGTCCAGCATCTCCTGGGTG | + |
Preference number: 4 (lower is better) Translates to: ARTKSNRPACRRRNTGLFLCSRS*SSISWV Trigger: CACCCAGGAGATGCTGGAGCAGGATCTGCTACAGAG...AAATAATCCAGTGTTTCTTCTACGACAAGCTGGTCTATTGCTCTTTGTCCGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR TCA 90 bp | CGGCTCTTTCTTAAGATATTGGGGGACGAGATACTAAGAGAACAGTTGATAGACTTCCCGGGAGAAGTTTaGTGGCAGTCTGGTTTTCTC | + |
Preference number: 4 (lower is better) Translates to: RLFLKILGDEILREQLIDFPGEV*WQSGFL Trigger: GAGAAAACCAGACTGCCATCAAACTTCTCCCGGGAA...GTCTATCAACTGTTCTCTTAGTATCTCGTCCCCCAATATCTTAAGAAAGAGCCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR GCA 90 bp | AAAGAGAGAGAGAGAGAGAACATTGTTCCAAACAGTTACAGCCATAGATCGACAATCGCTTCTTGGTGCTaGTGTTCCCAATGCCGGACT | + |
Preference number: 4 (lower is better) Translates to: KERERENIVPNSYSHRSTIASWC*CSQCRT Trigger: AGTCCGGCATTGGGAACAGCAGCACCAAGAAGCGAT...TGTCGATCTATGGCTGTAACTGTTTGGAACAATGTTCTCTCTCTCTCTCTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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3UTR CAA 72 bp | GAATTAGGAGGCTGTGTATTAAATGGCTTCCTAGTCTaGGCTCATACAAGCTCTGTAGTCAGTCAGTGCGCA | + |
Preference number: 4 (lower is better) Translates to: ELGGCVLNGFLV*AHTSSVVSQCA Trigger: TGCGCACTGACTGACTACAGAGCTTGTATGAGCCAAGACTAGGAAGCCATTTAATACACAGCCTCCTAATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR TCA 90 bp | TTTCTTAAGATATTGGGGGACGAGATACTAAGAGAACAGTTGATAGACAACCCCGTGCCCGGAGATTATTaGCAAAGTAGCTTTCGGGGA | + |
Preference number: 4 (lower is better) Translates to: FLKILGDEILREQLIDNPVPGDY*QSSFRG Trigger: TCCCCGAAAGCTACTTTGTCAATAATCTCCGGGCAC...GGGGTTGTCTATCAACTGTTCTCTTAGTATCTCGTCCCCCAATATCTTAAGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR TCA 90 bp | GCACGGACAAAGAGCAATAGACCAGCTTGTCGTAGAAGAAACACTGGATTATTTGTCTCAAGAGATCTCTaGAGACAGCCATATCCACAG | + |
Preference number: 4 (lower is better) Translates to: ARTKSNRPACRRRNTGLFVSRDL*RQPYPQ Trigger: CTGTGGATATGGCTGTCTTCAGAGATCTCTTGAGAC...AAATAATCCAGTGTTTCTTCTACGACAAGCTGGTCTATTGCTCTTTGTCCGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR GCA 90 bp | GAAACGAAGGTAAAGATATCACTGTATTCTGCTAATGATGGTGGAGACGGAGTGTGGAGCTGCTGCTGTTaGTTCTTCTTAATTCGGGAG | + |
Preference number: 4 (lower is better) Translates to: ETKVKISLYSANDGGDGVWSCCC*FFLIRE Trigger: CTCCCGAATTAAGAAGAAGCAACAGCAGCAGCTCCA...CACTCCGTCTCCACCATCATTAGCAGAATACAGTGATATCTTTACCTTCGTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR TCA 90 bp | CGGCTCTTTCTTAAGATATTGGGGGACGAGATACTAAGAGAACAGTTGATAGACAGATCCTTGACGATTTaGATTCCCATGGAGTCGTCA | + |
Preference number: 4 (lower is better) Translates to: RLFLKILGDEILREQLIDRSLTI*IPMESS Trigger: TGACGACTCCATGGGAATTCAAATCGTCAAGGATCT...GTCTATCAACTGTTCTCTTAGTATCTCGTCCCCCAATATCTTAAGAAAGAGCCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR GCA 90 bp | CGGCTCTTTCTTAAGATATTGGGGGACGAGATACTAAGAGAACAGTTGATAGACGCCGTAGAATTCGTCTaGTGTCTCGCAACATTCTAT | + |
Preference number: 4 (lower is better) Translates to: RLFLKILGDEILREQLIDAVEFV*CLATFY Trigger: ATAGAATGTTGCGAGACAGCAGACGAATTCTACGGC...GTCTATCAACTGTTCTCTTAGTATCTCGTCCCCCAATATCTTAAGAAAGAGCCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR GCA 90 bp | ATAAAAGAAATTCTCTTCTTGTGCTTAACTTTGGGAAACAGTGGGTCTCATCATCATCACCATCACCGCTaGTGCCTTCACTGTGAGCTG | + |
Preference number: 4 (lower is better) Translates to: IKEILFLCLTLGNSGSHHHHHHR*CLHCEL Trigger: CAGCTCACAGTGAAGGCAGCAGCGGTGATGGTGATG...ATGATGAGACCCACTGTTTCCCAAAGTTAAGCACAAGAAGAGAATTTCTTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR CCA 90 bp | GCACGGACAAAGAGCAATAGACCAGCTTGTCGTAGAAGAAACACTGGATTATTTAGCCTAGATGACTCTTaGTCCTCGGCATGTTCTTTT | + |
Preference number: 4 (lower is better) Translates to: ARTKSNRPACRRRNTGLFSLDDS*SSACSF Trigger: AAAAGAACATGCCGAGGACCAAGAGTCATCTAGGCT...AAATAATCCAGTGTTTCTTCTACGACAAGCTGGTCTATTGCTCTTTGTCCGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR CCA 90 bp | CACGGACAAAGAGCAATAGACCAGCTTGTCGTAGAAGAAACACTGGATTATTTATTGGGGTTCTTTCTGTaGGGCCATATAACCCCAAAT | + |
Preference number: 4 (lower is better) Translates to: HGQRAIDQLVVEETLDYLLGFFL*GHITPN Trigger: ATTTGGGGTTATATGGCCCCACAGAAAGAACCCCAA...TAAATAATCCAGTGTTTCTTCTACGACAAGCTGGTCTATTGCTCTTTGTCCGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR CCA 90 bp | ATAAAAGAAATTCTCTTCTTGTGCTTAACTTTGGGAAACAGTGGGTCTCATCATGTCTGCATGAGTTCATaGCTCTGTAGCAGATCCTGC | + |
Preference number: 4 (lower is better) Translates to: IKEILFLCLTLGNSGSHHVCMSS*LCSRSC Trigger: GCAGGATCTGCTACAGAGCCATGAACTCATGCAGAC...ATGATGAGACCCACTGTTTCCCAAAGTTAAGCACAAGAAGAGAATTTCTTTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR GCA 90 bp | GAACTAGACAAAAGAGAGAGAGAGAGAGAACATTGTTCCAAACAGTTACAGCCAGTCGCTTCTTTAATCTaGTTTTGGTACTTCTGCAGT | + |
Preference number: 4 (lower is better) Translates to: ELDKREREREHCSKQLQPVASLI*FWYFCS Trigger: ACTGCAGAAGTACCAAAAGCAGATTAAAGAAGCGAC...TGGCTGTAACTGTTTGGAACAATGTTCTCTCTCTCTCTCTCTTTTGTCTAGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR CCA 90 bp | CACACACACAAAAATATTCTTCCAGCTATTCGTTCAACCAATACTCGGCCCATATCTTTAATCTGCTTTTaGTACTTCTGCAGTTCAGGT | + |
Preference number: 4 (lower is better) Translates to: HTHKNILPAIRSTNTRPISLICF*YFCSSG Trigger: ACCTGAACTGCAGAAGTACCAAAAGCAGATTAAAGA...TATGGGCCGAGTATTGGTTGAACGAATAGCTGGAAGAATATTTTTGTGTGTGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR TCA 90 bp | ATAAAAGAAATTCTCTTCTTGTGCTTAACTTTGGGAAACAGTGGGTCTCATCATTGGCTGGAAACGGTGTaGTGTTATAGGTATACTTTT | + |
Preference number: 4 (lower is better) Translates to: IKEILFLCLTLGNSGSHHWLETV*CYRYTF Trigger: AAAAGTATACCTATAACATCACACCGTTTCCAGCCA...ATGATGAGACCCACTGTTTCCCAAAGTTAAGCACAAGAAGAGAATTTCTTTTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS GCA 90 bp | GTCCCTTCGCAGGGGGCGGCCCTGGGACGCACGGTCCCCGCCGGCTaGCACCTCCTCCTCCTCGGTGCAGCTGTAGAGCTCGGTGAGCAA | + |
Preference number: 5 (lower is better) Translates to: VPSQGAALGRTVPAG*HLLLLGAAVELGEQ Trigger: TTGCTCACCGAGCTCTACAGCTGCACCGAGGAGGAGGAGGTGGCAGCCGGCGGGGACCGTGCGTCCCAGGGCCGCCCCCTGCGAAGGGAC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219179.2 |
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CDS GCA 90 bp | CTCCTGCAGCACTCGGGAGTCGCCAGCGCCGCGGCCGCCCAGGAATaGGTCGGAACCCGAGGTCTCGGTGGAGCTGTCCAGGCTGTCCCT | + |
Preference number: 5 (lower is better) Translates to: LLQHSGVASAAAAQE*VGTRGLGGAVQAVP Trigger: AGGGACAGCCTGGACAGCTCCACCGAGACCTCGGGTTCCGACGCATTCCTGGGCGGCCGCGGCGCTGGCGACTCCCGAGTGCTGCAGGAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219179.2 |
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CDS TCA 90 bp | GCACATTGCTCAGGATGGTGCCCACGCCACCGCCGCCCTGGCGCTTaGGGCATCGCCCGCCGCGACGCAGGGAGCCGGTCAGTTTGTCTT | + |
Preference number: 5 (lower is better) Translates to: AHCSGWCPRHRRPGA*GIARRDAGSRSVCL Trigger: AAGACAAACTGACCGGCTCCCTGCGTCGCGGCGGGCGATGCCTCAAGCGCCAGGGCGGCGGTGGCGTGGGCACCATCCTGAGCAATGTGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS CCA 90 bp | TTCTTGAGCACATTGCTCAGGATGGTGCCCACGCCACCGCCGCCCTaGCGCTTGAGGCATCGCCCGCCGCGACGCAGGGAGCCGGTCAGT | + |
Preference number: 5 (lower is better) Translates to: FLSTLLRMVPTPPPP*RLRHRPPRRREPVS Trigger: ACTGACCGGCTCCCTGCGTCGCGGCGGGCGATGCCTCAAGCGCCAGGGCGGCGGTGGCGTGGGCACCATCCTGAGCAATGTGCTCAAGAA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS GCA 90 bp | ACCGTGTGGTTCGGGAGGCACGTGGCAAAGAGCGTGAGGAACCACTaGATTGTGAAGACGTTGGTGAGCGGGGGCTCGTATCCGCCTCCG | + |
Preference number: 5 (lower is better) Translates to: TVWFGRHVAKSVRNH*IVKTLVSGGSYPPP Trigger: CGGAGGCGGATACGAGCCCCCGCTCACCAACGTCTTCACAATGCAGTGGTTCCTCACGCTCTTTGCCACGTGCCTCCCGAACCACACGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS GCA 90 bp | TTCAGCTCTCGAAGAACGGTCTTCAGCTCACTGGAGTCTTTCCGCTaGAGGTACTGCATCTGGAGCCGCAGGCTCGGGCGCTCCCGCAGC | + |
Preference number: 5 (lower is better) Translates to: FSSRRTVFSSLESFR*RYCIWSRRLGRSRS Trigger: GCTGCGGGAGCGCCCGAGCCTGCGGCTCCAGATGCAGTACCTGCAGCGGAAAGACTCCAGTGAGCTGAAGACCGTTCTTCGAGAGCTGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219179.2 |
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CDS GCA 90 bp | CAGCATCTCCTGGGTGAGGCGCCCCATGGTGCCGTAGAATTCGTCTaGTGTCTCGCAACATTCTATCTGCTCTCCCAGCTTTGCCCAGAT | + |
Preference number: 5 (lower is better) Translates to: QHLLGEAPHGAVEFV*CLATFYLLSQLCPD Trigger: ATCTGGGCAAAGCTGGGAGAGCAGATAGAATGTTGCGAGACAGCAGACGAATTCTACGGCACCATGGGGCGCCTCACCCAGGAGATGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS CCA 90 bp | TGCCAATCCTGTACTTCAGCTCTCGAAGAACGGTCTTCAGCTCACTaGAGTCTTTCCGCTGCAGGTACTGCATCTGGAGCCGCAGGCTCG | + |
Preference number: 5 (lower is better) Translates to: CQSCTSALEERSSAH*SLSAAGTASGAAGS Trigger: CGAGCCTGCGGCTCCAGATGCAGTACCTGCAGCGGAAAGACTCCAGTGAGCTGAAGACCGTTCTTCGAGAGCTGAAGTACAGGATTGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219179.2 |
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CDS-3UTR CAA 90 bp | ACACCATATACGTATGATCTCTCCCTCCCTGCGTTCCTCCCTCTGGCCGCTTCTCCTTTGGTATCCCCGTaGACAGTCTGGCCACAGCCT | + |
Preference number: 5 (lower is better) Translates to: TPYTYDLSLPAFLPLAASPLVSP*TVWPQP Trigger: AGGCTGTGGCCAGACTGTCAACGGGGATACCAAAGG...AGAAGCGGCCAGAGGGAGGAACGCAGGGAGGGAGAGATCATACGTATATGGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR CAA 90 bp | GTTCTTCCGGTGTTTGCATACAGTGTCCGACACGTGGGGAAGATGGACAGTCACAGGGCAGCCAGGATGTaGAAGCCTTGGCAGTACCCG | + |
Preference number: 5 (lower is better) Translates to: VLPVFAYSVRHVGKMDSHRAARM*KPWQYP Trigger: CGGGTACTGCCAAGGCTTCAACATCCTGGCTGCCCT...GTGACTGTCCATCTTCCCCACGTGTCGGACACTGTATGCAAACACCGGAAGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR CAA 90 bp | GTTCTTCCGGTGTTTGCATACAGTGTCCGACACGTGGGGAAGATGGACAGTCACTCTGCTCTCCCAGCTTaGCCCAGATGGCCAGCGACA | + |
Preference number: 5 (lower is better) Translates to: VLPVFAYSVRHVGKMDSHSALPA*PRWPAT Trigger: TGTCGCTGGCCATCTGGGCAAAGCTGGGAGAGCAGA...GTGACTGTCCATCTTCCCCACGTGTCGGACACTGTATGCAAACACCGGAAGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS TCA 90 bp | TCCCAGCTTTGCCCAGATGGCCAGCGACACCCTCAGGATGATCTCTaGACCTTCGAAGAACACGGAGTCCCAGATCTTCAGAACCGTGTG | + |
Preference number: 5 (lower is better) Translates to: SQLCPDGQRHPQDDL*TFEEHGVPDLQNRV Trigger: CACACGGTTCTGAAGATCTGGGACTCCGTGTTCTTCGAAGGTTCAGAGATCATCCTGAGGGTGTCGCTGGCCATCTGGGCAAAGCTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR CAA 90 bp | AATCCACTTTACCCAGCAGATGGGCAAAGGTCCCATCTGGTCCCCACCATGGAATCACTCCGACAGGAATaGATGGCTCCTGGGCTCAGC | + |
Preference number: 5 (lower is better) Translates to: NPLYPADGQRSHLVPTMESLRQE*MAPGLS Trigger: GCTGAGCCCAGGAGCCATCAATTCCTGTCGGAGTGA...TTCCATGGTGGGGACCAGATGGGACCTTTGCCCATCTGCTGGGTAAAGTGGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR CAA 90 bp | ACAGTCACTGTGCGGTGTTCTGGTTTGGAGCTGTGCATCTGCAGTGGAGAGAGATGCCGCGGCATCCCTTaGGTTCAGTTCCAAGGCTTC | + |
Preference number: 5 (lower is better) Translates to: TVTVRCSGLELCICSGERCRGIP*VQFQGF Trigger: GAAGCCTTGGAACTGAACCAAAGGGATGCCGCGGCA...TCTCTCTCCACTGCAGATGCACAGCTCCAAACCAGAACACCGCACAGTGACTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS TCA 90 bp | TCTGCTCTCCCAGCTTTGCCCAGATGGCCAGCGACACCCTCAGGATaGTCTCTGAACCTTCGAAGAACACGGAGTCCCAGATCTTCAGAA | + |
Preference number: 5 (lower is better) Translates to: SALPALPRWPATPSG*SLNLRRTRSPRSSE Trigger: TTCTGAAGATCTGGGACTCCGTGTTCTTCGAAGGTTCAGAGATCATCCTGAGGGTGTCGCTGGCCATCTGGGCAAAGCTGGGAGAGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS CCA 90 bp | TCTGAACCTTCGAAGAACACGGAGTCCCAGATCTTCAGAACCGTGTaGTTCGGGAGGCACGTGGCAAAGAGCGTGAGGAACCACTGCATT | + |
Preference number: 5 (lower is better) Translates to: SEPSKNTESQIFRTV*FGRHVAKSVRNHCI Trigger: AATGCAGTGGTTCCTCACGCTCTTTGCCACGTGCCTCCCGAACCACACGGTTCTGAAGATCTGGGACTCCGTGTTCTTCGAAGGTTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR CAA 90 bp | ACGTATGATCTCTCCCTCCCTGCGTTCCTCCCTCTGGCCGCTTCTATTCAGGAGTTCTCCTCCATTCCTTaGGTATCCCCGTTGACAGTC | + |
Preference number: 5 (lower is better) Translates to: TYDLSLPAFLPLAASIQEFSSIP*VSPLTV Trigger: GACTGTCAACGGGGATACCAAAGGAATGGAGGAGAA...CTCCTGAATAGAAGCGGCCAGAGGGAGGAACGCAGGGAGGGAGAGATCATACGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS GCA 90 bp | GCCTGTCTTTCTGCTTCAGCTGCCGGAGTAACTTTGCGGACTGGATaGCAATCCTGTACTTCAGCTCTCGAAGAACGGTCTTCAGCTCAC | + |
Preference number: 5 (lower is better) Translates to: ACLSASAAGVTLRTG*QSCTSALEERSSAH Trigger: GTGAGCTGAAGACCGTTCTTCGAGAGCTGAAGTACAGGATTGGCATCCAGTCCGCAAAGTTACTCCGGCAGCTGAAGCAGAAAGACAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219179.2 |
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CDS CCA 90 bp | AGAAGCCTGTCTTTCTGCTTCAGCTGCCGGAGTAACTTTGCGGACTaGATGCCAATCCTGTACTTCAGCTCTCGAAGAACGGTCTTCAGC | + |
Preference number: 5 (lower is better) Translates to: RSLSFCFSCRSNFAD*MPILYFSSRRTVFS Trigger: GCTGAAGACCGTTCTTCGAGAGCTGAAGTACAGGATTGGCATCCAGTCCGCAAAGTTACTCCGGCAGCTGAAGCAGAAAGACAGGCTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219179.2 |
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CDS-3UTR CAA 90 bp | GAACATGGGGGAAAGAGGGCCTTCTCCAGAGAAAGGCAGTGTTCAAGTAACAAACGCTTCTTGAGCACATaGCTCAGGATGGTGCCCACG | + |
Preference number: 5 (lower is better) Translates to: EHGGKRAFSRERQCSSNKRFLST*LRMVPT Trigger: CGTGGGCACCATCCTGAGCAATGTGCTCAAGAAGCG...TTTGTTACTTGAACACTGCCTTTCTCTGGAGAAGGCCCTCTTTCCCCCATGTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR CAA 90 bp | AGAAGGCCAGAAGAGGGCTTAACAGTCTACAGGTTGTCTTTTCTAAAGAGCTCAAGCGCGTCCCCCTCGTaGCCCTCCATCACTTCCAGA | + |
Preference number: 5 (lower is better) Translates to: RRPEEGLTVYRLSFLKSSSASPS*PSITSR Trigger: TCTGGAAGTGATGGAGGGCAACGAGGGGGACGCGCT...TGAGCTCTTTAGAAAAGACAACCTGTAGACTGTTAAGCCCTCTTCTGGCCTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS TCA 90 bp | TGTGACACAGCCTGCAGGCACGCTGTCACAATGTCACAGTTCTTCTaGACTTTATGCAGAAGCCTGTCTTTCTGCTTCAGCTGCCGGAGT | + |
Preference number: 5 (lower is better) Translates to: CDTACRHAVTMSQFF*TLCRSLSFCFSCRS Trigger: ACTCCGGCAGCTGAAGCAGAAAGACAGGCTTCTGCATAAAGTTCAGAAGAACTGTGACATTGTGACAGCGTGCCTGCAGGCTGTGTCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219179.2 |
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CDS-3UTR CAA 90 bp | CTTTACCCAGCAGATGGGCAAAGGTCCCATCTGGTCCCCACCATGGAACTTCCATCCATCATCATACTGTaGAACGCTGCATGGTACTCA | + |
Preference number: 5 (lower is better) Translates to: LYPADGQRSHLVPTMELPSIIIL*NAAWYS Trigger: TGAGTACCATGCAGCGTTCAACAGTATGATGATGGA...TGGAAGTTCCATGGTGGGGACCAGATGGGACCTTTGCCCATCTGCTGGGTAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR CAA 90 bp | GCACGGACAAAGAGCAATAGACCAGCTTGTCGTAGAAGAAACACTGGATTATTTTGCCGCTTCAGGGCGTaGATGTCCGTGGTCATCCGC | + |
Preference number: 5 (lower is better) Translates to: ARTKSNRPACRRRNTGLFCRFRA*MSVVIR Trigger: GCGGATGACCACGGACATCAACGCCCTGAAGCGGCA...AAATAATCCAGTGTTTCTTCTACGACAAGCTGGTCTATTGCTCTTTGTCCGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS TCA 90 bp | CAAGGTCAACCAAACCTTTCTCCTCCATTCCTTTGGTATCCCCGTTaGCAGTCTGGCCACAGCCTTGAGAGCATCATACCACTGCTGAAA | + |
Preference number: 5 (lower is better) Translates to: QGQPNLSPPFLWYPR*QSGHSLESIIPLLK Trigger: TTTCAGCAGTGGTATGATGCTCTCAAGGCTGTGGCCAGACTGTCAACGGGGATACCAAAGGAATGGAGGAGAAAGGTTTGGTTGACCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064107.7 ENSMUST00000219179.2 |
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CDS-3UTR CAA 90 bp | AATCCACTTTACCCAGCAGATGGGCAAAGGTCCCATCTGGTCCCCACCATGGAAGGGTTGCTTCTCTCATaGAAAGTGAAACGCATGGTT | + |
Preference number: 5 (lower is better) Translates to: NPLYPADGQRSHLVPTMEGLLLS*KVKRMV Trigger: AACCATGCGTTTCACTTTCAATGAGAGAAGCAACCC...TTCCATGGTGGGGACCAGATGGGACCTTTGCCCATCTGCTGGGTAAAGTGGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS GCA 90 bp | CTTCAGTCTCAAGAGATCTCTGAAGACAGCCATATCCACAGACAGTaGCCGGAGATTATTGACAAAGTAGCTTTCGGGGAGTACCTTATC | + |
Preference number: 5 (lower is better) Translates to: LQSQEISEDSHIHRQ*PEIIDKVAFGEYLI Trigger: GATAAGGTACTCCCCGAAAGCTACTTTGTCAATAATCTCCGGGCACTGTCTGTGGATATGGCTGTCTTCAGAGATCTCTTGAGACTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR CAA 90 bp | GAACATGGGGGAAAGAGGGCCTTCTCCAGAGAAAGGCAGTGTTCAAGTAACAAACTGCTGAAAACCATTTaGACCCAAAGAAGGCTCAAG | + |
Preference number: 5 (lower is better) Translates to: EHGGKRAFSRERQCSSNKLLKTI*TQRRLK Trigger: CTTGAGCCTTCTTTGGGTCAAAATGGTTTTCAGCAG...TTTGTTACTTGAACACTGCCTTTCTCTGGAGAAGGCCCTCTTTCCCCCATGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR CAA 90 bp | CGGCTCTTTCTTAAGATATTGGGGGACGAGATACTAAGAGAACAGTTGATAGACCAGATCCTTGACGATTaGAATTCCCATGGAGTCGTC | + |
Preference number: 5 (lower is better) Translates to: RLFLKILGDEILREQLIDQILDD*NSHGVV Trigger: GACGACTCCATGGGAATTCAAATCGTCAAGGATCTG...GTCTATCAACTGTTCTCTTAGTATCTCGTCCCCCAATATCTTAAGAAAGAGCCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS-3UTR CAA 90 bp | CTTGGTGGAGAGAGAACCATTTTCTCTTCAAGTCAGTCATGGGGTGTGTGTGTGTTCTTTAATCTGCTTTaGGTACTTCTGCAGTTCAGG | + |
Preference number: 5 (lower is better) Translates to: LGGERTIFSSSQSWGVCVFFNLL*VLLQFR Trigger: CCTGAACTGCAGAAGTACCAAAAGCAGATTAAAGAA...CACACACACACCCCATGACTGACTTGAAGAGAAAATGGTTCTCTCTCCACCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS CCA 72 bp | GAGCTGTCCAGGCTGTCCCTTCGCAGGGGGCGGCCCTaGGACGCACGGTCCCCGCCGGCTGCCACCTCCTCC | + |
Preference number: 6 (lower is better) Translates to: ELSRLSLRRGRP*DARSPPAATSS Trigger: GGAGGAGGTGGCAGCCGGCGGGGACCGTGCGTCCCAGGGCCGCCCCCTGCGAAGGGACAGCCTGGACAGCTC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219179.2 |
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CDS CAA 72 bp | CTCAGGATGGTGCCCACGCCACCGCCGCCCTGGCGCTaGAGGCATCGCCCGCCGCGACGCAGGGAGCCGGTC | + |
Preference number: 6 (lower is better) Translates to: LRMVPTPPPPWR*RHRPPRRREPV Trigger: GACCGGCTCCCTGCGTCGCGGCGGGCGATGCCTCAAGCGCCAGGGCGGCGGTGGCGTGGGCACCATCCTGAG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS TCA 72 bp | TCAGGATGGTGCCCACGCCACCGCCGCCCTGGCGCTTaGGGCATCGCCCGCCGCGACGCAGGGAGCCGGTCA | + |
Preference number: 6 (lower is better) Translates to: SGWCPRHRRPGA*GIARRDAGSRS Trigger: TGACCGGCTCCCTGCGTCGCGGCGGGCGATGCCTCAAGCGCCAGGGCGGCGGTGGCGTGGGCACCATCCTGA 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS GCA 72 bp | CAGGGGGCGGCCCTGGGACGCACGGTCCCCGCCGGCTaGCACCTCCTCCTCCTCGGTGCAGCTGTAGAGCTC | + |
Preference number: 6 (lower is better) Translates to: QGAALGRTVPAG*HLLLLGAAVEL Trigger: GAGCTCTACAGCTGCACCGAGGAGGAGGAGGTGGCAGCCGGCGGGGACCGTGCGTCCCAGGGCCGCCCCCTG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219179.2 |
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CDS GCA 72 bp | CACTCGGGAGTCGCCAGCGCCGCGGCCGCCCAGGAATaGGTCGGAACCCGAGGTCTCGGTGGAGCTGTCCAG | + |
Preference number: 6 (lower is better) Translates to: HSGVASAAAAQE*VGTRGLGGAVQ Trigger: CTGGACAGCTCCACCGAGACCTCGGGTTCCGACGCATTCCTGGGCGGCCGCGGCGCTGGCGACTCCCGAGTG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219179.2 |
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CDS CCA 72 bp | ACATTGCTCAGGATGGTGCCCACGCCACCGCCGCCCTaGCGCTTGAGGCATCGCCCGCCGCGACGCAGGGAG | + |
Preference number: 6 (lower is better) Translates to: TLLRMVPTPPPP*RLRHRPPRRRE Trigger: CTCCCTGCGTCGCGGCGGGCGATGCCTCAAGCGCCAGGGCGGCGGTGGCGTGGGCACCATCCTGAGCAATGT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS CAA 90 bp | AGCACATTGCTCAGGATGGTGCCCACGCCACCGCCGCCCTGGCGCTaGAGGCATCGCCCGCCGCGACGCAGGGAGCCGGTCAGTTTGTCT | + |
Preference number: 6 (lower is better) Translates to: STLLRMVPTPPPPWR*RHRPPRRREPVSLS Trigger: AGACAAACTGACCGGCTCCCTGCGTCGCGGCGGGCGATGCCTCAAGCGCCAGGGCGGCGGTGGCGTGGGCACCATCCTGAGCAATGTGCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS CAA 90 bp | AACCGGGGCGCGGTCCGCGAGATGCAGCTGCGCTTCTTGAGCACATaGCTCAGGATGGTGCCCACGCCACCGCCGCCCTGGCGCTTGAGG | + |
Preference number: 6 (lower is better) Translates to: NRGAVREMQLRFLST*LRMVPTPPPPWRLR Trigger: CCTCAAGCGCCAGGGCGGCGGTGGCGTGGGCACCATCCTGAGCAATGTGCTCAAGAAGCGCAGCTGCATCTCGCGGACCGCGCCCCGGTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS CAA 90 bp | GTGCAGAGCAACCGGGGCGCGGTCCGCGAGATGCAGCTGCGCTTCTaGAGCACATTGCTCAGGATGGTGCCCACGCCACCGCCGCCCTGG | + |
Preference number: 6 (lower is better) Translates to: VQSNRGAVREMQLRF*STLLRMVPTPPPPW Trigger: CCAGGGCGGCGGTGGCGTGGGCACCATCCTGAGCAATGTGCTCAAGAAGCGCAGCTGCATCTCGCGGACCGCGCCCCGGTTGCTCTGCAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS TCA 72 bp | CCACCTCCTCCTCCTCGGTGCAGCTGTAGAGCTCGGTaGGCAACCCGCTCACTAGGGACGCCGTGCGGCTCG | + |
Preference number: 6 (lower is better) Translates to: PPPPPRCSCRAR*ATRSLGTPCGS Trigger: CGAGCCGCACGGCGTCCCTAGTGAGCGGGTTGCTCACCGAGCTCTACAGCTGCACCGAGGAGGAGGAGGTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219179.2 |
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CDS CAA 72 bp | GCGGTCCGCGAGATGCAGCTGCGCTTCTTGAGCACATaGCTCAGGATGGTGCCCACGCCACCGCCGCCCTGG | + |
Preference number: 6 (lower is better) Translates to: AVREMQLRFLST*LRMVPTPPPPW Trigger: CCAGGGCGGCGGTGGCGTGGGCACCATCCTGAGCAATGTGCTCAAGAAGCGCAGCTGCATCTCGCGGACCGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS GCA 72 bp | GTCTTCAGCTCACTGGAGTCTTTCCGCTGCAGGTACTaGATCTGGAGCCGCAGGCTCGGGCGCTCCCGCAGC | + |
Preference number: 6 (lower is better) Translates to: VFSSLESFRCRY*IWSRRLGRSRS Trigger: GCTGCGGGAGCGCCCGAGCCTGCGGCTCCAGATGCAGTACCTGCAGCGGAAAGACTCCAGTGAGCTGAAGAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219179.2 |
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CDS GCA 72 bp | CGAAGAACGGTCTTCAGCTCACTGGAGTCTTTCCGCTaGAGGTACTGCATCTGGAGCCGCAGGCTCGGGCGC | + |
Preference number: 6 (lower is better) Translates to: RRTVFSSLESFR*RYCIWSRRLGR Trigger: GCGCCCGAGCCTGCGGCTCCAGATGCAGTACCTGCAGCGGAAAGACTCCAGTGAGCTGAAGACCGTTCTTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219179.2 |
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CDS CAA 72 bp | GCAAAGAGCGTGAGGAACCACTGCATTGTGAAGACGTaGGTGAGCGGGGGCTCGTATCCGCCTCCGCTCTCT | + |
Preference number: 6 (lower is better) Translates to: AKSVRNHCIVKT*VSGGSYPPPLS Trigger: AGAGAGCGGAGGCGGATACGAGCCCCCGCTCACCAACGTCTTCACAATGCAGTGGTTCCTCACGCTCTTTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS GCA 72 bp | TTCGGGAGGCACGTGGCAAAGAGCGTGAGGAACCACTaGATTGTGAAGACGTTGGTGAGCGGGGGCTCGTAT | + |
Preference number: 6 (lower is better) Translates to: FGRHVAKSVRNH*IVKTLVSGGSY Trigger: ATACGAGCCCCCGCTCACCAACGTCTTCACAATGCAGTGGTTCCTCACGCTCTTTGCCACGTGCCTCCCGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS TCA 72 bp | CCAGCTTTGCCCAGATGGCCAGCGACACCCTCAGGATaGTCTCTGAACCTTCGAAGAACACGGAGTCCCAGA | + |
Preference number: 6 (lower is better) Translates to: PALPRWPATPSG*SLNLRRTRSPR Trigger: TCTGGGACTCCGTGTTCTTCGAAGGTTCAGAGATCATCCTGAGGGTGTCGCTGGCCATCTGGGCAAAGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS GCA 72 bp | CTGGGTGAGGCGCCCCATGGTGCCGTAGAATTCGTCTaGTGTCTCGCAACATTCTATCTGCTCTCCCAGCTT | + |
Preference number: 6 (lower is better) Translates to: LGEAPHGAVEFV*CLATFYLLSQL Trigger: AAGCTGGGAGAGCAGATAGAATGTTGCGAGACAGCAGACGAATTCTACGGCACCATGGGGCGCCTCACCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS CCA 72 bp | TCGAAGAACACGGAGTCCCAGATCTTCAGAACCGTGTaGTTCGGGAGGCACGTGGCAAAGAGCGTGAGGAAC | + |
Preference number: 6 (lower is better) Translates to: SKNTESQIFRTV*FGRHVAKSVRN Trigger: GTTCCTCACGCTCTTTGCCACGTGCCTCCCGAACCACACGGTTCTGAAGATCTGGGACTCCGTGTTCTTCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS TCA 72 bp | TGCCCAGATGGCCAGCGACACCCTCAGGATGATCTCTaGACCTTCGAAGAACACGGAGTCCCAGATCTTCAG | + |
Preference number: 6 (lower is better) Translates to: CPDGQRHPQDDL*TFEEHGVPDLQ Trigger: CTGAAGATCTGGGACTCCGTGTTCTTCGAAGGTTCAGAGATCATCCTGAGGGTGTCGCTGGCCATCTGGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS CCA 72 bp | TGTACTTCAGCTCTCGAAGAACGGTCTTCAGCTCACTaGAGTCTTTCCGCTGCAGGTACTGCATCTGGAGCC | + |
Preference number: 6 (lower is better) Translates to: CTSALEERSSAH*SLSAAGTASGA Trigger: GGCTCCAGATGCAGTACCTGCAGCGGAAAGACTCCAGTGAGCTGAAGACCGTTCTTCGAGAGCTGAAGTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219179.2 |
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CDS TCA 72 bp | GAACTACAGCCCGTGCGATGCAGATCCTTGACGATTTaGATTCCCATGGAGTCGTCATCCGGGTTGCTTCTC | + |
Preference number: 6 (lower is better) Translates to: ELQPVRCRSLTI*IPMESSSGLLL Trigger: GAGAAGCAACCCGGATGACGACTCCATGGGAATTCAAATCGTCAAGGATCTGCATCGCACGGGCTGTAGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064107.7 ENSMUST00000219179.2 |
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CDS GCA 72 bp | TCTGCTTCAGCTGCCGGAGTAACTTTGCGGACTGGATaGCAATCCTGTACTTCAGCTCTCGAAGAACGGTCT | + |
Preference number: 6 (lower is better) Translates to: SASAAGVTLRTG*QSCTSALEERS Trigger: AGACCGTTCTTCGAGAGCTGAAGTACAGGATTGGCATCCAGTCCGCAAAGTTACTCCGGCAGCTGAAGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219179.2 |
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CDS CAA 72 bp | GGAACTACAGCCCGTGCGATGCAGATCCTTGACGATTaGAATTCCCATGGAGTCGTCATCCGGGTTGCTTCT | + |
Preference number: 6 (lower is better) Translates to: GTTARAMQILDD*NSHGVVIRVAS Trigger: AGAAGCAACCCGGATGACGACTCCATGGGAATTCAAATCGTCAAGGATCTGCATCGCACGGGCTGTAGTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064107.7 ENSMUST00000219179.2 |
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CDS CCA 72 bp | TCTTTCTGCTTCAGCTGCCGGAGTAACTTTGCGGACTaGATGCCAATCCTGTACTTCAGCTCTCGAAGAACG | + |
Preference number: 6 (lower is better) Translates to: SFCFSCRSNFAD*MPILYFSSRRT Trigger: CGTTCTTCGAGAGCTGAAGTACAGGATTGGCATCCAGTCCGCAAAGTTACTCCGGCAGCTGAAGCAGAAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219179.2 |
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CDS GCA 72 bp | CAAGAGATCTCTGAAGACAGCCATATCCACAGACAGTaGCCGGAGATTATTGACAAAGTAGCTTTCGGGGAG | + |
Preference number: 6 (lower is better) Translates to: QEISEDSHIHRQ*PEIIDKVAFGE Trigger: CTCCCCGAAAGCTACTTTGTCAATAATCTCCGGGCACTGTCTGTGGATATGGCTGTCTTCAGAGATCTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |
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CDS TCA 72 bp | AGACAGCCATATCCACAGACAGTGCCCGGAGATTATTaGCAAAGTAGCTTTCGGGGAGTACCTTATCAATCA | + |
Preference number: 6 (lower is better) Translates to: RQPYPQTVPGDY*QSSFRGVPYQS Trigger: TGATTGATAAGGTACTCCCCGAAAGCTACTTTGTCAATAATCTCCGGGCACTGTCTGTGGATATGGCTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064107.7 |