RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TBC1D2B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000037410

Ensembl transcript IDs: ENSMUST00000041767.14, ENSMUST00000128874.3, ENSMUST00000144348.8

Found 341 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCTCACGATTAGGAGCCTTGAGCACGGTGACTGCACCGGCGCTGTaGACCTGGAAGTGTGTGGGCGGATCTGCTCCGGGCTCCGCAGCC +
Preference number: 1 (lower is better)
Translates to: SSRLGALSTVTAPAL*TWKCVGGSAPGSAA
Trigger: GGCTGCGGAGCCCGGAGCAGATCCGCCCACACACTTCCAGGTGCACAGCGCCGGTGCAGTCACCGTGCTCAAGGCTCCTAATCGTGAGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000144348.8
3UTR GCA 90 bp CCCAAGGCTGAGAGCCGGCACTTCCAAGGGGGTGGGGCATCTCCCTaGATTTGGTCTCAGGGAGGCTCTGGAATAGCAGTAAGACCACTG +
Preference number: 1 (lower is better)
Translates to: PKAESRHFQGGGASP*IWSQGGSGIAVRPL
Trigger: CAGTGGTCTTACTGCTATTCCAGAGCCTCCCTGAGACCAAATGCAGGGAGATGCCCCACCCCCTTGGAAGTGCCGGCTCTCAGCCTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR GCA 90 bp CAGGCAACACAGAGACTAGAACTCACCACTCCAGGTGCTTCCAGATaGAGGAAGCTGGCAGTCAGCCCCACTCCAGCTGTCAGGCAGGAG +
Preference number: 1 (lower is better)
Translates to: QATQRLELTTPGASR*RKLAVSPTPAVRQE
Trigger: CTCCTGCCTGACAGCTGGAGTGGGGCTGACTGCCAGCTTCCTGCATCTGGAAGCACCTGGAGTGGTGAGTTCTAGTCTCTGTGTTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR GCA 90 bp GGACAGACAGCTGGCAAAGCAGCTGGCAGTGAGAAGTGTGGGCACTaGTGCAGATCAGGGGGAGTGCTGCAGTCTGAAAGGCTACATAGG +
Preference number: 1 (lower is better)
Translates to: GQTAGKAAGSEKCGH*CRSGGVLQSERLHR
Trigger: CCTATGTAGCCTTTCAGACTGCAGCACTCCCCCTGATCTGCAGCAGTGCCCACACTTCTCACTGCCAGCTGCTTTGCCAGCTGTCTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR TCA 90 bp TGGGTAAAGGTTCAGATGAAAAGCAGCACGAGGCAGTCCCTGACATaGGGGGTACCTGCCACGGTGGCTGGGAGAAGTCTGGAACCTCAG +
Preference number: 1 (lower is better)
Translates to: WVKVQMKSSTRQSLT*GVPATVAGRSLEPQ
Trigger: CTGAGGTTCCAGACTTCTCCCAGCCACCGTGGCAGGTACCCCTCATGTCAGGGACTGCCTCGTGCTGCTTTTCATCTGAACCTTTACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR GCA 90 bp CAGCTGGCAGTGAGAAGTGTGGGCACTGCTGCAGATCAGGGGGAGTaGTGCAGTCTGAAAGGCTACATAGGAGAGCAAAGGCTAGTCCAG +
Preference number: 1 (lower is better)
Translates to: QLAVRSVGTAADQGE*CSLKGYIGEQRLVQ
Trigger: CTGGACTAGCCTTTGCTCTCCTATGTAGCCTTTCAGACTGCAGCACTCCCCCTGATCTGCAGCAGTGCCCACACTTCTCACTGCCAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR CCA 90 bp CCCTCTTCTTATGGTGACCTTGTGACCCTGGAAGCAGCCACACTGTaGCGCCCTGCACATTCCTCCACAGTGCTGCCCTTGGGTAAAAGA +
Preference number: 1 (lower is better)
Translates to: PSSYGDLVTLEAATL*RPAHSSTVLPLGKR
Trigger: TCTTTTACCCAAGGGCAGCACTGTGGAGGAATGTGCAGGGCGCCACAGTGTGGCTGCTTCCAGGGTCACAAGGTCACCATAAGAAGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR CCA 90 bp CTTCCTACAGCAGCTCCTGGAGATGTGTTTAGCCCCACTGCAATCTaGGACAGACAGCTGGCAAAGCAGCTGGCAGTGAGAAGTGTGGGC +
Preference number: 1 (lower is better)
Translates to: LPTAAPGDVFSPTAI*DRQLAKQLAVRSVG
Trigger: GCCCACACTTCTCACTGCCAGCTGCTTTGCCAGCTGTCTGTCCCAGATTGCAGTGGGGCTAAACACATCTCCAGGAGCTGCTGTAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR GCA 90 bp CTGGCAGTGAGAAGTGTGGGCACTGCTGCAGATCAGGGGGAGTGCTaGAGTCTGAAAGGCTACATAGGAGAGCAAAGGCTAGTCCAGAAG +
Preference number: 1 (lower is better)
Translates to: LAVRSVGTAADQGEC*SLKGYIGEQRLVQK
Trigger: CTTCTGGACTAGCCTTTGCTCTCCTATGTAGCCTTTCAGACTGCAGCACTCCCCCTGATCTGCAGCAGTGCCCACACTTCTCACTGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR TCA 90 bp GGCCAGTTGTGTGCTTGCTTTTTAAAGAGGTCCCTCTTCTTATGGTaGCCTTGTGACCCTGGAAGCAGCCACACTGTGGCGCCCTGCACA +
Preference number: 1 (lower is better)
Translates to: GQLCACFLKRSLFLW*PCDPGSSHTVAPCT
Trigger: TGTGCAGGGCGCCACAGTGTGGCTGCTTCCAGGGTCACAAGGTCACCATAAGAAGAGGGACCTCTTTAAAAAGCAAGCACACAACTGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR GCA 90 bp AGGAGCCCACAAGCCACAGATCTGAGAGTTTCCTATGTTCCCTTATaGAGGGCTGGGTCTACTGCAAGGTCCCTTTGGAACCCCAAGCCA +
Preference number: 1 (lower is better)
Translates to: RSPQATDLRVSYVPL*RAGSTARSLWNPKP
Trigger: TGGCTTGGGGTTCCAAAGGGACCTTGCAGTAGACCCAGCCCTGCATAAGGGAACATAGGAAACTCTCAGATCTGTGGCTTGTGGGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR TCA 90 bp GTGTGCTTGCTTTTTAAAGAGGTCCCTCTTCTTATGGTGACCTTGTaGCCCTGGAAGCAGCCACACTGTGGCGCCCTGCACATTCCTCCA +
Preference number: 1 (lower is better)
Translates to: VCLLFKEVPLLMVTL*PWKQPHCGALHIPP
Trigger: TGGAGGAATGTGCAGGGCGCCACAGTGTGGCTGCTTCCAGGGTCACAAGGTCACCATAAGAAGAGGGACCTCTTTAAAAAGCAAGCACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR GCA 90 bp ACACACCAGGCACATGTTCTAAGCCATGTCCCCGGCATCACCAGGTaGTTTAAAGACTCCTCCACCAGCATACAGGACAAAAGCAACCCG +
Preference number: 1 (lower is better)
Translates to: THQAHVLSHVPGITR*FKDSSTSIQDKSNP
Trigger: CGGGTTGCTTTTGTCCTGTATGCTGGTGGAGGAGTCTTTAAAGCACCTGGTGATGCCGGGGACATGGCTTAGAACATGTGCCTGGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR GCA 90 bp GCCCCGAAATGGGAGATGAGAAAGTGCAGCTTAGCTCTGGACATCTaGCCAGCAGAAGCCAGAGGCTGTAGATGTTACAATCTGACAGCT +
Preference number: 1 (lower is better)
Translates to: APKWEMRKCSLALDI*PAEARGCRCYNLTA
Trigger: AGCTGTCAGATTGTAACATCTACAGCCTCTGGCTTCTGCTGGGCAGATGTCCAGAGCTAAGCTGCACTTTCTCATCTCCCATTTCGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR GCA 90 bp TATGATGCATGTGACACGGAAATGGCTGTAAAGCCACCTGCCCCCTaGCCCGAAATGGGAGATGAGAAAGTGCAGCTTAGCTCTGGACAT +
Preference number: 1 (lower is better)
Translates to: YDACDTEMAVKPPAP*PEMGDEKVQLSSGH
Trigger: ATGTCCAGAGCTAAGCTGCACTTTCTCATCTCCCATTTCGGGGCAGGGGGCAGGTGGCTTTACAGCCATTTCCGTGTCACATGCATCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR CCA 90 bp CCGCCAGTAAATTTACACCAAATGCACATCTGGACTGGCATCTTCTaGTACGAAACTGACATGGCAACTGAGCCCTGGGGCAACCCTACC +
Preference number: 1 (lower is better)
Translates to: PPVNLHQMHIWTGIF*YETDMATEPWGNPT
Trigger: GGTAGGGTTGCCCCAGGGCTCAGTTGCCATGTCAGTTTCGTACCAGAAGATGCCAGTCCAGATGTGCATTTGGTGTAAATTTACTGGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR TCA 90 bp AGAGATTCTAGAGCCCTGAATCCAGGAGCCCACAAGCCACAGATCTaGGAGTTTCCTATGTTCCCTTATGCAGGGCTGGGTCTACTGCAA +
Preference number: 1 (lower is better)
Translates to: RDSRALNPGAHKPQI*EFPMFPYAGLGLLQ
Trigger: TTGCAGTAGACCCAGCCCTGCATAAGGGAACATAGGAAACTCTCAGATCTGTGGCTTGTGGGCTCCTGGATTCAGGGCTCTAGAATCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR GCA 90 bp GAGAAACTAATGCCGTCTCTCAGGGAATGGCAGAACAGGACCCCATaGATATTGGAGATTTTCGTTTCCAATCACTGGGCTGGAACCCAG +
Preference number: 1 (lower is better)
Translates to: EKLMPSLREWQNRTP*ILEIFVSNHWAGTQ
Trigger: CTGGGTTCCAGCCCAGTGATTGGAAACGAAAATCTCCAATATGCATGGGGTCCTGTTCTGCCATTCCCTGAGAGACGGCATTAGTTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR GCA 90 bp CACTGTGTGCGTGACTGCAGGAAGCTCATGAGGACTGTTTGCATTTaGATAAATCCAGGAGGATCACTAGGACTCGTGTGTGTGTGTGTG +
Preference number: 1 (lower is better)
Translates to: HCVRDCRKLMRTVCI*INPGGSLGLVCVCV
Trigger: CACACACACACACACGAGTCCTAGTGATCCTCCTGGATTTATGCAAATGCAAACAGTCCTCATGAGCTTCCTGCAGTCACGCACACAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR CCA 90 bp ACAGCGAGCACAGTTCTGGCTTTTTCTGCAGAAGGATTTGGGTGCTaGGAAATTATATCTGTGGTATCTCTGGCCACAAGGCCCTTGGGA +
Preference number: 1 (lower is better)
Translates to: TASTVLAFSAEGFGC*EIISVVSLATRPLG
Trigger: TCCCAAGGGCCTTGTGGCCAGAGATACCACAGATATAATTTCCCAGCACCCAAATCCTTCTGCAGAAAAAGCCAGAACTGTGCTCGCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000144348.8
3UTR TCA 90 bp TCTGGAATAGCAGTAAGACCACTGTCCAGCTCCAGACAAGCTTCCTaGAGAAACCAGGCCTCAAACCACCATCCTAAAGACACAAGGATG +
Preference number: 1 (lower is better)
Translates to: SGIAVRPLSSSRQAS*RNQASNHHPKDTRM
Trigger: CATCCTTGTGTCTTTAGGATGGTGGTTTGAGGCCTGGTTTCTTCAGGAAGCTTGTCTGGAGCTGGACAGTGGTCTTACTGCTATTCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR TCA 90 bp CTGTATCAACAGACCACAGCTAACAAACACCAGAGAAGTACATGCTaGCCAGTGACTGCTGTTCGGGTGTTATCACGGCTAGAAGTAGCC +
Preference number: 1 (lower is better)
Translates to: LYQQTTANKHQRSTC*PVTAVRVLSRLEVA
Trigger: GGCTACTTCTAGCCGTGATAACACCCGAACAGCAGTCACTGGTCAGCATGTACTTCTCTGGTGTTTGTTAGCTGTGGTCTGTTGATACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR CCA 90 bp CAGGACAAAAGCAACCCGCCAGTAAATTTACACCAAATGCACATCTaGACTGGCATCTTCTGGTACGAAACTGACATGGCAACTGAGCCC +
Preference number: 1 (lower is better)
Translates to: QDKSNPPVNLHQMHI*TGIFWYETDMATEP
Trigger: GGGCTCAGTTGCCATGTCAGTTTCGTACCAGAAGATGCCAGTCCAGATGTGCATTTGGTGTAAATTTACTGGCGGGTTGCTTTTGTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR TCA 90 bp TGGACATCTGCCCAGCAGAAGCCAGAGGCTGTAGATGTTACAATCTaGCAGCTGATGTGCAGTGATGTGCCTTTGCTACTTTTGGTTATG +
Preference number: 1 (lower is better)
Translates to: WTSAQQKPEAVDVTI*QLMCSDVPLLLLVM
Trigger: CATAACCAAAAGTAGCAAAGGCACATCACTGCACATCAGCTGTCAGATTGTAACATCTACAGCCTCTGGCTTCTGCTGGGCAGATGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR GCA 90 bp AAACAGGAAAATGGGTCATGGAAAAAGCGCTTCTCGAAACTGTCTTaGTCCGCTCCTGAGTCTGAGTGTGTTTACACTAAGGATTGTTTC +
Preference number: 1 (lower is better)
Translates to: KQENGSWKKRFSKLS*SAPESECVYTKDCF
Trigger: GAAACAATCCTTAGTGTAAACACACTCAGACTCAGGAGCGGAGCAAGACAGTTTCGAGAAGCGCTTTTTCCATGACCCATTTTCCTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR GCA 90 bp GTGTCCACACAAAAACTTGCACATAGGGTTTGTAGGAACACTAATTaGAACAGTGAACAAGTAGAGGGACTGGAGAGATGGCTACGTAGT +
Preference number: 1 (lower is better)
Translates to: VSTQKLAHRVCRNTN*NSEQVEGLERWLRS
Trigger: ACTACGTAGCCATCTCTCCAGTCCCTCTACTTGTTCACTGTTGCAATTAGTGTTCCTACAAACCCTATGTGCAAGTTTTTGTGTGGACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR CCA 90 bp CAGGATCTTGACACCCTGACTTCCCCACAATTATGGAGTATAACCTaGAATTGTAAGCTGAATAAAGTTGCTTCTGTCATCATGGCGGCA +
Preference number: 1 (lower is better)
Translates to: QDLDTLTSPQLWSIT*NCKLNKVASVIMAA
Trigger: TGCCGCCATGATGACAGAAGCAACTTTATTCAGCTTACAATTCCAGGTTATACTCCATAATTGTGGGGAAGTCAGGGTGTCAAGATCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR TCA 90 bp TCTGTTTGCTCTTGTCTGAGGATTTGCCTAGCTATTTCAGGATCTTaGCACCCTGACTTCCCCACAATTATGGAGTATAACCTGGAATTG +
Preference number: 1 (lower is better)
Translates to: SVCSCLRICLAISGS*HPDFPTIMEYNLEL
Trigger: CAATTCCAGGTTATACTCCATAATTGTGGGGAAGTCAGGGTGTCAAGATCCTGAAATAGCTAGGCAAATCCTCAGACAAGAGCAAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR TCA 90 bp GATTACATTGATGTTGGAAGAGCTGTTTGGGTCTTGGGCTATATATaGGAGGGAATACGAGCTGCATACAACACACATGCATTCCTTCTG +
Preference number: 1 (lower is better)
Translates to: DYIDVGRAVWVLGYI*EGIRAAYNTHAFLL
Trigger: CAGAAGGAATGCATGTGTGTTGTATGCAGCTCGTATTCCCTCTCATATATAGCCCAAGACCCAAACAGCTCTTCCAACATCAATGTAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR GCA 90 bp CTTGGGCTATATATGAGAGGGAATACGAGCTGCATACAACACACATaGATTCCTTCTGTTTGCTCTTGTCTGAGGATTTGCCTAGCTATT +
Preference number: 1 (lower is better)
Translates to: LGLYMRGNTSCIQHT*IPSVCSCLRICLAI
Trigger: AATAGCTAGGCAAATCCTCAGACAAGAGCAAACAGAAGGAATGCATGTGTGTTGTATGCAGCTCGTATTCCCTCTCATATATAGCCCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR-3UTR GCA 90 bp TCCAGAAGGGACTGCGGCTGGCAGTGCCAAGCCACCAGCAGAGGGCTCCCACGCGGCTGTAAAGCCACCTaGCCCCTGCCCCGAAATGGG +
Preference number: 2 (lower is better)
Translates to: SRRDCGWQCQATSRGLPRGCKAT*PLPRNG
Trigger: CCCATTTCGGGGCAGGGGGCAGGTGGCTTTACAGCC...GCGTGGGAGCCCTCTGCTGGTGGCTTGGCACTGCCAGCCGCAGTCCCTTCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR-3UTR GCA 90 bp TCCCACCAGCTCTCCAGGGGCAGCTTCCACAGCGAGCACAGTTCTGGCTTTTTCACTGCACCGGCGCTGTaGACCTGGAAGTGTGTGGGC +
Preference number: 2 (lower is better)
Translates to: SHQLSRGSFHSEHSSGFFTAPAL*TWKCVG
Trigger: GCCCACACACTTCCAGGTGCACAGCGCCGGTGCAGT...GAAAAAGCCAGAACTGTGCTCGCTGTGGAAGCTGCCCCTGGAGAGCTGGTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000144348.8
3UTR-3UTR GCA 90 bp TCCAGAAGGGACTGCGGCTGGCAGTGCCAAGCCACCAGCAGAGGGCTCCCACGCGGCCAGTTGTGTGCTTaGTTTTTAAAGAGGTCCCTC +
Preference number: 2 (lower is better)
Translates to: SRRDCGWQCQATSRGLPRGQLCA*FLKRSL
Trigger: GAGGGACCTCTTTAAAAAGCAAGCACACAACTGGCC...GCGTGGGAGCCCTCTGCTGGTGGCTTGGCACTGCCAGCCGCAGTCCCTTCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR-3UTR GCA 90 bp TTTCCTGACCAGCCACCCACCCAGAGGTCGCTGCATCAGGACACCCACTGTACTGGCACAAGAGGGACCTaGAATCTGGGAGGCTCGGGT +
Preference number: 2 (lower is better)
Translates to: FPDQPPTQRSLHQDTHCTGTRGT*NLGGSG
Trigger: ACCCGAGCCTCCCAGATTGCAGGTCCCTCTTGTGCC...AGTACAGTGGGTGTCCTGATGCAGCGACCTCTGGGTGGGTGGCTGGTCAGGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR-3UTR CCA 90 bp GCAGCCCGGTCTCCCACCAGCTCTCCAGGGGCAGCTTCCACAGCGAGCACAGTTTATCTGTGGTATCTCTaGCCACAAGGCCCTTGGGAA +
Preference number: 2 (lower is better)
Translates to: AARSPTSSPGAASTASTVYLWYL*PQGPWE
Trigger: TTCCCAAGGGCCTTGTGGCCAGAGATACCACAGATA...AACTGTGCTCGCTGTGGAAGCTGCCCCTGGAGAGCTGGTGGGAGACCGGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000144348.8
3UTR-3UTR GCA 90 bp TCCAGAAGGGACTGCGGCTGGCAGTGCCAAGCCACCAGCAGAGGGCTCCCACGCATTCCTCCACAGTGCTaGCCTTGGGTAAAAGAAAGA +
Preference number: 2 (lower is better)
Translates to: SRRDCGWQCQATSRGLPRIPPQC*PWVKER
Trigger: TCTTTCTTTTACCCAAGGGCAGCACTGTGGAGGAAT...GCGTGGGAGCCCTCTGCTGGTGGCTTGGCACTGCCAGCCGCAGTCCCTTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR-3UTR CCA 90 bp GGCACGTGCATTTGGACCCACACGCTGGAGGCTGTGCTTTGGCTTTCTCAGCCCGGTACGAAACTGACATaGCAACTGAGCCCTGGGGCA +
Preference number: 2 (lower is better)
Translates to: GTCIWTHTLEAVLWLSQPGTKLT*QLSPGA
Trigger: TGCCCCAGGGCTCAGTTGCCATGTCAGTTTCGTACC...GGGCTGAGAAAGCCAAAGCACAGCCTCCAGCGTGTGGGTCCAAATGCACGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR-3UTR CCA 90 bp ACGCTGGAGGCTGTGCTTTGGCTTTCTCAGCCCACGAGGCTCACCAGGCAGGAGTTCCAATCACTGGGCTaGAACCCAGAGTCCCACACA +
Preference number: 2 (lower is better)
Translates to: TLEAVLWLSQPTRLTRQEFQSLG*NPESHT
Trigger: TGTGTGGGACTCTGGGTTCCAGCCCAGTGATTGGAA...CTCCTGCCTGGTGAGCCTCGTGGGCTGAGAAAGCCAAAGCACAGCCTCCAGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR-3UTR TCA 90 bp GGGGGTGGGGCATCTCCCTGCATTTGGTCTCAGGGAGGCTCTGGAATAGCAGTACTTATGGTGACCTTGTaGCCCTGGAAGCAGCCACAC +
Preference number: 2 (lower is better)
Translates to: GGGASPCIWSQGGSGIAVLMVTL*PWKQPH
Trigger: GTGTGGCTGCTTCCAGGGTCACAAGGTCACCATAAG...TACTGCTATTCCAGAGCCTCCCTGAGACCAAATGCAGGGAGATGCCCCACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR-3UTR CCA 90 bp TTTCCTGACCAGCCACCCACCCAGAGGTCGCTGCATCAGGACACCCACTGTACTTCCCTTATGCAGGGCTaGGTCTACTGCAAGGTCCCT +
Preference number: 2 (lower is better)
Translates to: FPDQPPTQRSLHQDTHCTSLMQG*VYCKVP
Trigger: AGGGACCTTGCAGTAGACCCAGCCCTGCATAAGGGA...AGTACAGTGGGTGTCCTGATGCAGCGACCTCTGGGTGGGTGGCTGGTCAGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR-3UTR TCA 90 bp GGCACGTGCATTTGGACCCACACGCTGGAGGCTGTGCTTTGGCTTTCTCAGCCCTCCAGACAAGCTTCCTaGAGAAACCAGGCCTCAAAC +
Preference number: 2 (lower is better)
Translates to: GTCIWTHTLEAVLWLSQPSRQAS*RNQASN
Trigger: GTTTGAGGCCTGGTTTCTTCAGGAAGCTTGTCTGGA...GGGCTGAGAAAGCCAAAGCACAGCCTCCAGCGTGTGGGTCCAAATGCACGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR-3UTR GCA 90 bp CCACCAGCTCTCCAGGGGCAGCTTCCACAGCGAGCACAGTTCTGGCTTTTTCTGGAGTCGGGGAAGTCCTaGTGTCCCACTTCATCATGT +
Preference number: 2 (lower is better)
Translates to: PPALQGQLPQRAQFWLFLESGKS*CPTSSC
Trigger: ACATGATGAAGTGGGACAGCAGGACTTCCCCGACTC...CAGAAAAAGCCAGAACTGTGCTCGCTGTGGAAGCTGCCCCTGGAGAGCTGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000144348.8
3UTR-3UTR CCA 90 bp TTCCACAGCGAGCACAGTTCTGGCTTTTTCTGCAGAAGGATTTGGGTGCTGGGACCGGCGCTGTGCACCTaGAAGTGTGTGGGCGGATCT +
Preference number: 2 (lower is better)
Translates to: FHSEHSSGFFCRRIWVLGPALCT*KCVGGS
Trigger: AGATCCGCCCACACACTTCCAGGTGCACAGCGCCGG...TCCCAGCACCCAAATCCTTCTGCAGAAAAAGCCAGAACTGTGCTCGCTGTGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000144348.8
3UTR-3UTR GCA 90 bp TCGGGCTTGCATCTAGCCTCTGTCTTCGAGGACTTTCCTGACCAGCCACCCACCCACACAACTGGCAGATaGTGTAAACAGGCCCTTGGA +
Preference number: 2 (lower is better)
Translates to: SGLHLASVFEDFPDQPPTHTTGR*CKQALG
Trigger: TCCAAGGGCCTGTTTACAGCATCTGCCAGTTGTGTG...GGTGGGTGGCTGGTCAGGAAAGTCCTCGAAGACAGAGGCTAGATGCAAGCCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR-3UTR GCA 90 bp AGTCGGGGAAGTCCTGCTGTCCCACTTCATCATGTCAAGGCTGTTGCAATATTCCTTGAGCACGGTGACTaGACCGGCGCTGTGCACCTG +
Preference number: 2 (lower is better)
Translates to: SRGSPAVPLHHVKAVAIFLEHGD*TGAVHL
Trigger: CAGGTGCACAGCGCCGGTGCAGTCACCGTGCTCAAG...GAATATTGCAACAGCCTTGACATGATGAAGTGGGACAGCAGGACTTCCCCGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000144348.8
3UTR-3UTR GCA 90 bp GAGGAGGGTAAAGACAGTCTCCGTGATGAGGGAATGGGAGAAGATGGCTCAGTCTTAGCTCTGGACATCTaGCCAGCAGAAGCCAGAGGC +
Preference number: 2 (lower is better)
Translates to: EEGKDSLRDEGMGEDGSVLALDI*PAEARG
Trigger: GCCTCTGGCTTCTGCTGGGCAGATGTCCAGAGCTAA...GACTGAGCCATCTTCTCCCATTCCCTCATCACGGAGACTGTCTTTACCCTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR-3UTR GCA 90 bp ATGGGTCATGGAAAAAGCGCTTCTCGAAACTGTCTTGCTCCGCTCCTGAGTCTGCACACTGTGGCGCCCTaGACATTCCTCCACAGTGCT +
Preference number: 2 (lower is better)
Translates to: MGHGKSASRNCLAPLLSLHTVAP*TFLHSA
Trigger: AGCACTGTGGAGGAATGTGCAGGGCGCCACAGTGTG...CAGACTCAGGAGCGGAGCAAGACAGTTTCGAGAAGCGCTTTTTCCATGACCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR-3UTR GCA 90 bp ATGGGTCATGGAAAAAGCGCTTCTCGAAACTGTCTTGCTCCGCTCCTGAGTCTGCCAGGTGCTTCCAGATaGAGGAAGCTGGCAGTCAGC +
Preference number: 2 (lower is better)
Translates to: MGHGKSASRNCLAPLLSLPGASR*RKLAVS
Trigger: GCTGACTGCCAGCTTCCTGCATCTGGAAGCACCTGG...CAGACTCAGGAGCGGAGCAAGACAGTTTCGAGAAGCGCTTTTTCCATGACCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR-3UTR GCA 90 bp CTTCTAAGACACTCTGATCACCCAGGAGGACTGCTGGAGCATGGCTGTCTGACAACAAACAGGCAGGTGTaGTCCTGCACACCCCTTGTG +
Preference number: 2 (lower is better)
Translates to: LLRHSDHPGGLLEHGCLTTNRQV*SCTPLV
Trigger: CACAAGGGGTGTGCAGGAGCACACCTGCCTGTTTGT...TGTCAGACAGCCATGCTCCAGCAGTCCTCCTGGGTGATCAGAGTGTCTTAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR-3UTR CCA 90 bp CCGGTGAGTCACCAATCAGGCAGCAAGCATATGATGCATGTGACACGGAAATGGCCCCCTGCCCCGAAATaGGAGATGAGAAAGTGCAGC +
Preference number: 2 (lower is better)
Translates to: PVSHQSGSKHMMHVTRKWPPAPK*EMRKCS
Trigger: GCTGCACTTTCTCATCTCCCATTTCGGGGCAGGGGG...CCATTTCCGTGTCACATGCATCATATGCTTGCTGCCTGATTGGTGACTCACCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR-3UTR CCA 90 bp ACAAGGATAATCCAGGCAACACAGAGACTAGAACTCACCACTCCAGGTGCTTCCGAAGCAGCCACACTGTaGCGCCCTGCACATTCCTCC +
Preference number: 2 (lower is better)
Translates to: TRIIQATQRLELTTPGASEAATL*RPAHSS
Trigger: GGAGGAATGTGCAGGGCGCCACAGTGTGGCTGCTTC...GGAAGCACCTGGAGTGGTGAGTTCTAGTCTCTGTGTTGCCTGGATTATCCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR-3UTR CCA 90 bp ACGCTGGAGGCTGTGCTTTGGCTTTCTCAGCCCACGAGGCTCACCAGGCAGGAGCTAGATACTGAAAAATaGACTCAGCCACTCAAGTGC +
Preference number: 2 (lower is better)
Translates to: TLEAVLWLSQPTRLTRQELDTEK*TQPLKC
Trigger: GCACTTGAGTGGCTGAGTCCATTTTTCAGTATCTAG...CTCCTGCCTGGTGAGCCTCGTGGGCTGAGAAAGCCAAAGCACAGCCTCCAGCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR-3UTR CCA 90 bp GAGGAGGGTAAAGACAGTCTCCGTGATGAGGGAATGGGAGAAGATGGCTCAGTCGCATCTCCCTGCATTTaGTCTCAGGGAGGCTCTGGA +
Preference number: 2 (lower is better)
Translates to: EEGKDSLRDEGMGEDGSVASPCI*SQGGSG
Trigger: TCCAGAGCCTCCCTGAGACCAAATGCAGGGAGATGC...GACTGAGCCATCTTCTCCCATTCCCTCATCACGGAGACTGTCTTTACCCTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR-3UTR CCA 90 bp TTTCCTGACCAGCCACCCACCCAGAGGTCGCTGCATCAGGACACCCACTGTACTCACCAAATGCACATCTaGACTGGCATCTTCTGGTAC +
Preference number: 2 (lower is better)
Translates to: FPDQPPTQRSLHQDTHCTHQMHI*TGIFWY
Trigger: GTACCAGAAGATGCCAGTCCAGATGTGCATTTGGTG...AGTACAGTGGGTGTCCTGATGCAGCGACCTCTGGGTGGGTGGCTGGTCAGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR-3UTR TCA 90 bp TTTCCTGACCAGCCACCCACCCAGAGGTCGCTGCATCAGGACACCCACTGTACTACAGCTGATGTGCAGTaGTGTGCCTTTGCTACTTTT +
Preference number: 2 (lower is better)
Translates to: FPDQPPTQRSLHQDTHCTTADVQ*CAFATF
Trigger: AAAAGTAGCAAAGGCACATCACTGCACATCAGCTGT...AGTACAGTGGGTGTCCTGATGCAGCGACCTCTGGGTGGGTGGCTGGTCAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR-3UTR TCA 90 bp ACAAGGATAATCCAGGCAACACAGAGACTAGAACTCACCACTCCAGGTGCTTCCCAAAGCAGCTGGCAGTaGGAAGTGTGGGCACTGCTG +
Preference number: 2 (lower is better)
Translates to: TRIIQATQRLELTTPGASQSSWQ*EVWALL
Trigger: CAGCAGTGCCCACACTTCTCACTGCCAGCTGCTTTG...GGAAGCACCTGGAGTGGTGAGTTCTAGTCTCTGTGTTGCCTGGATTATCCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR-3UTR TCA 90 bp TCTGATCACCCAGGAGGACTGCTGGAGCATGGCTGTCTGACATCGCACTGGTCGAGTCAGGCGATCAGATaGAACCATGTGATGAGACTT +
Preference number: 2 (lower is better)
Translates to: SDHPGGLLEHGCLTSHWSSQAIR*NHVMRL
Trigger: AAGTCTCATCACATGGTTTCATCTGATCGCCTGACT...CGACCAGTGCGATGTCAGACAGCCATGCTCCAGCAGTCCTCCTGGGTGATCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR-3UTR CCA 90 bp GGGGGTGGGGCATCTCCCTGCATTTGGTCTCAGGGAGGCTCTGGAATAGCAGTAATAGGCAAAGGCCATTaGCTAAATAGAGAGACCAGC +
Preference number: 2 (lower is better)
Translates to: GGGASPCIWSQGGSGIAVIGKGH*LNRETS
Trigger: GCTGGTCTCTCTATTTAGCCAATGGCCTTTGCCTAT...TACTGCTATTCCAGAGCCTCCCTGAGACCAAATGCAGGGAGATGCCCCACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR CAA 90 bp CTAATGCCGTCTCTCAGGGAATGGCAGAACAGGACCCCATGCATATaGGAGATTTTCGTTTCCAATCACTGGGCTGGAACCCAGAGTCCC +
Preference number: 2 (lower is better)
Translates to: LMPSLREWQNRTPCI*EIFVSNHWAGTQSP
Trigger: GGGACTCTGGGTTCCAGCCCAGTGATTGGAAACGAAAATCTCCAATATGCATGGGGTCCTGTTCTGCCATTCCCTGAGAGACGGCATTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR-3UTR TCA 90 bp CTTCTAAGACACTCTGATCACCCAGGAGGACTGCTGGAGCATGGCTGTCTGACATTAACACTGTGTGCGTaGCTGCAGGAAGCTCATGAG +
Preference number: 2 (lower is better)
Translates to: LLRHSDHPGGLLEHGCLTLTLCA*LQEAHE
Trigger: CTCATGAGCTTCCTGCAGTCACGCACACAGTGTTAA...TGTCAGACAGCCATGCTCCAGCAGTCCTCCTGGGTGATCAGAGTGTCTTAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR-3UTR CCA 90 bp ACAAGCCACAGATCTGAGAGTTTCCTATGTTCCCTTATGCAGGGCTGGGTCTACAGCCCCACTGCAATCTaGGACAGACAGCTGGCAAAG +
Preference number: 2 (lower is better)
Translates to: TSHRSESFLCSLMQGWVYSPTAI*DRQLAK
Trigger: CTTTGCCAGCTGTCTGTCCCAGATTGCAGTGGGGCT...GTAGACCCAGCCCTGCATAAGGGAACATAGGAAACTCTCAGATCTGTGGCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR-3UTR CCA 90 bp CTTATGTTGGTAGTCATCGAGGGAACTCAAACCAATCCCACAATGAGACACCAGGGTGACACCTGGGGCTaGAGAGATGGATCGGTAGGG +
Preference number: 2 (lower is better)
Translates to: LMLVVIEGTQTNPTMRHQGDTWG*RDGSVG
Trigger: CCCTACCGATCCATCTCTCCAGCCCCAGGTGTCACC...CTGGTGTCTCATTGTGGGATTGGTTTGAGTTCCCTCGATGACTACCAACATAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR-3UTR TCA 90 bp AAGCCACCTGCCCCCTGCCCCGAAATGGGAGATGAGAAAGTGCAGCTTAGCTCTTGCTACTTTTGGTTATaGAGGAAGGCAAGAAGAGCA +
Preference number: 2 (lower is better)
Translates to: KPPAPCPEMGDEKVQLSSCYFWL*RKARRA
Trigger: TGCTCTTCTTGCCTTCCTTCATAACCAAAAGTAGCA...AGAGCTAAGCTGCACTTTCTCATCTCCCATTTCGGGGCAGGGGGCAGGTGGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR-3UTR CCA 90 bp AAACAAACAAACAAACAGGCAGGTGTGCTCCTGCACACCCCTTGTGTGTGTCCTCTAGTTCCAGGGAATTaGATGGCCTTTCTGGCCTCC +
Preference number: 2 (lower is better)
Translates to: KQTNKQAGVLLHTPCVCPLVPGN*MAFLAS
Trigger: GGAGGCCAGAAAGGCCATCCAATTCCCTGGAACTAG...AGGACACACACAAGGGGTGTGCAGGAGCACACCTGCCTGTTTGTTTGTTTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR-3UTR TCA 90 bp GCTTCAAGAAAGAAGTGTTCCAAGTCCCCAGAGTCTGCTATTCCAGAGGCCATATCCCTCTTCTTATGGTaGCCTTGTGACCCTGGAAGC +
Preference number: 2 (lower is better)
Translates to: ASRKKCSKSPESAIPEAISLFLW*PCDPGS
Trigger: GCTTCCAGGGTCACAAGGTCACCATAAGAAGAGGGA...TATGGCCTCTGGAATAGCAGACTCTGGGGACTTGGAACACTTCTTTCTTGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR-3UTR TCA 90 bp CAAACAAACAAACAAACAGGCAGGTGTGCTCCTGCACACCCCTTGTGTGTGTCCACTCTCATATGGGGCTaGCACAGTATGTCAGACAGA +
Preference number: 2 (lower is better)
Translates to: QTNKQTGRCAPAHPLCVSTLIWG*HSMSDR
Trigger: TCTGTCTGACATACTGTGTCAGCCCCATATGAGAGT...GGACACACACAAGGGGTGTGCAGGAGCACACCTGCCTGTTTGTTTGTTTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR-3UTR GCA 90 bp ACAGGCAGGTGTGCTCCTGCACACCCCTTGTGTGTGTCCTTAACACTGTGTGCGCTCATGAGGACTGTTTaGATTTGCATAAATCCAGGA +
Preference number: 2 (lower is better)
Translates to: TGRCAPAHPLCVSLTLCALMRTV*ICINPG
Trigger: TCCTGGATTTATGCAAATGCAAACAGTCCTCATGAG...CGCACACAGTGTTAAGGACACACACAAGGGGTGTGCAGGAGCACACCTGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR-3UTR CCA 90 bp GCTCATGAGGACTGTTTGCATTTGCATAAATCCAGGAGGATCACTAGGACTCGTCCATGTGATGAGACTTaGCCTGGCACCAGAAACAGC +
Preference number: 2 (lower is better)
Translates to: AHEDCLHLHKSRRITRTRPCDET*PGTRNS
Trigger: GCTGTTTCTGGTGCCAGGCCAAGTCTCATCACATGG...ACGAGTCCTAGTGATCCTCCTGGATTTATGCAAATGCAAACAGTCCTCATGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR-3UTR CCA 90 bp GAGAATAAGGCAAAGGATATAGGAGGGGCTCTGATGTTCACATATGGGTGCAGAGCCCAGTCCTGCATCTaGAAGCTTTGTCATCCCAGA +
Preference number: 2 (lower is better)
Translates to: ENKAKDIGGALMFTYGCRAQSCI*KLCHPR
Trigger: TCTGGGATGACAAAGCTTCCAGATGCAGGACTGGGC...TCTGCACCCATATGTGAACATCAGAGCCCCTCCTATATCCTTTGCCTTATTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR-3UTR TCA 90 bp GCTTCAAGAAAGAAGTGTTCCAAGTCCCCAGAGTCTGCTATTCCAGAGGCCATACACAAGCCACAGATCTaGGAGTTTCCTATGTTCCCT +
Preference number: 2 (lower is better)
Translates to: ASRKKCSKSPESAIPEAIHKPQI*EFPMFP
Trigger: AGGGAACATAGGAAACTCTCAGATCTGTGGCTTGTG...TATGGCCTCTGGAATAGCAGACTCTGGGGACTTGGAACACTTCTTTCTTGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR-3UTR TCA 90 bp GAGAATAAGGCAAAGGATATAGGAGGGGCTCTGATGTTCACATATGGGTGCAGAGCTATTTCAGGATCTTaGCACCCTGACTTCCCCACA +
Preference number: 2 (lower is better)
Translates to: ENKAKDIGGALMFTYGCRAISGS*HPDFPT
Trigger: TGTGGGGAAGTCAGGGTGTCAAGATCCTGAAATAGC...TCTGCACCCATATGTGAACATCAGAGCCCCTCCTATATCCTTTGCCTTATTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR-3UTR GCA 90 bp CTTATGTTGGTAGTCATCGAGGGAACTCAAACCAATCCCACAATGAGACACCAGACCTGTGTCAAAGTGTaGAGCAAAGCACAAAGACCC +
Preference number: 2 (lower is better)
Translates to: LMLVVIEGTQTNPTMRHQTCVKV*SKAQRP
Trigger: GGGTCTTTGTGCTTTGCTGCACACTTTGACACAGGT...CTGGTGTCTCATTGTGGGATTGGTTTGAGTTCCCTCGATGACTACCAACATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR-3UTR GCA 90 bp CCAACTCCCACGTCTAACTTAAGTCAAGTTTTCAAAGATTCTGTGGCCACCAAGGGACAAGCCCAGTCCTaGATCTGGAAGCTTTGTCAT +
Preference number: 2 (lower is better)
Translates to: PTPTSNLSQVFKDSVATKGQAQS*IWKLCH
Trigger: ATGACAAAGCTTCCAGATGCAGGACTGGGCTTGTCC...CTTGGTGGCCACAGAATCTTTGAAAACTTGACTTAAGTTAGACGTGGGAGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR-3UTR TCA 90 bp CAAACAAACAAACAAACAGGCAGGTGTGCTCCTGCACACCCCTTGTGTGTGTCCGCAATTCGGCTTACATaGAAGGTTCAGAATAAACAA +
Preference number: 2 (lower is better)
Translates to: QTNKQTGRCAPAHPLCVSAIRLT*KVQNKQ
Trigger: TTGTTTATTCTGAACCTTTCATGTAAGCCGAATTGC...GGACACACACAAGGGGTGTGCAGGAGCACACCTGCCTGTTTGTTTGTTTGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR CAA 90 bp GAGAGGGAATACGAGCTGCATACAACACACATGCATTCCTTCTGTTaGCTCTTGTCTGAGGATTTGCCTAGCTATTTCAGGATCTTGACA +
Preference number: 2 (lower is better)
Translates to: EREYELHTTHMHSFC*LLSEDLPSYFRILT
Trigger: TGTCAAGATCCTGAAATAGCTAGGCAAATCCTCAGACAAGAGCAAACAGAAGGAATGCATGTGTGTTGTATGCAGCTCGTATTCCCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR-3UTR GCA 90 bp GAGAATAAGGCAAAGGATATAGGAGGGGCTCTGATGTTCACATATGGGTGCAGAAGAGGGAATACGAGCTaGATACAACACACATGCATT +
Preference number: 2 (lower is better)
Translates to: ENKAKDIGGALMFTYGCRRGNTS*IQHTCI
Trigger: AATGCATGTGTGTTGTATGCAGCTCGTATTCCCTCT...TCTGCACCCATATGTGAACATCAGAGCCCCTCCTATATCCTTTGCCTTATTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR CAA 90 bp TTAGCTTGGACTTGGACAAATCTGTGCAGGACTGTCTTGATTACATaGATGTTGGAAGAGCTGTTTGGGTCTTGGGCTATATATGAGAGG +
Preference number: 2 (lower is better)
Translates to: LAWTWTNLCRTVLIT*MLEELFGSWAIYER
Trigger: CCTCTCATATATAGCCCAAGACCCAAACAGCTCTTCCAACATCAATGTAATCAAGACAGTCCTGCACAGATTTGTCCAAGTCCAAGCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR-3UTR TCA 90 bp GAGAATAAGGCAAAGGATATAGGAGGGGCTCTGATGTTCACATATGGGTGCAGACCTGGAATTGTAAGCTaGATAAAGTTGCTTCTGTCA +
Preference number: 2 (lower is better)
Translates to: ENKAKDIGGALMFTYGCRPGIVS*IKLLLS
Trigger: TGACAGAAGCAACTTTATTCAGCTTACAATTCCAGG...TCTGCACCCATATGTGAACATCAGAGCCCCTCCTATATCCTTTGCCTTATTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR-3UTR CCA 90 bp TATGAGAGGGAATACGAGCTGCATACAACACACATGCATTCCTTCTGTTTGCTCAACACAGATAGAAAGTaGATTTGCCTAGGACTGAGG +
Preference number: 2 (lower is better)
Translates to: YEREYELHTTHMHSFCLLNTDRK*ICLGLR
Trigger: CCTCAGTCCTAGGCAAATCCACTTTCTATCTGTGTT...GAGCAAACAGAAGGAATGCATGTGTGTTGTATGCAGCTCGTATTCCCTCTCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR-3UTR GCA 90 bp CTTATGTTGGTAGTCATCGAGGGAACTCAAACCAATCCCACAATGAGACACCAGATCTTGAAAACGTTATaGAAAGTGGAGAAAGCCACA +
Preference number: 2 (lower is better)
Translates to: LMLVVIEGTQTNPTMRHQILKTL*KVEKAT
Trigger: TGTGGCTTTCTCCACTTTGCATAACGTTTTCAAGAT...CTGGTGTCTCATTGTGGGATTGGTTTGAGTTCCCTCGATGACTACCAACATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR-3UTR TCA 90 bp GAAAGGTTCAGAATAAACAAATCCAACACAGATAGAAAGTGGATTTGCCTAGGACCAGATTCAGGAAGCTaGGAAAGGAGTAGAGTTGCA +
Preference number: 2 (lower is better)
Translates to: ERFRINKSNTDRKWICLGPDSGS*ERSRVA
Trigger: TGCAACTCTACTCCTTTCTCAGCTTCCTGAATCTGG...TCCTAGGCAAATCCACTTTCTATCTGTGTTGGATTTGTTTATTCTGAACCTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR CAA 90 bp AGGTACTTAGCTAACAGAAACAAAACTGTGTGTCCACACAAAAACTaGCACATAGGGTTTGTAGGAACACTAATTGCAACAGTGAACAAG +
Preference number: 2 (lower is better)
Translates to: RYLANRNKTVCPHKN*HIGFVGTLIATVNK
Trigger: CTTGTTCACTGTTGCAATTAGTGTTCCTACAAACCCTATGTGCAAGTTTTTGTGTGGACACACAGTTTTGTTTCTGTTAGCTAAGTACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR CCA 72 bp GCCTTGAGCACGGTGACTGCACCGGCGCTGTGCACCTaGAAGTGTGTGGGCGGATCTGCTCCGGGCTCCGCA +
Preference number: 3 (lower is better)
Translates to: ALSTVTAPALCT*KCVGGSAPGSA
Trigger: TGCGGAGCCCGGAGCAGATCCGCCCACACACTTCCAGGTGCACAGCGCCGGTGCAGTCACCGTGCTCAAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000144348.8
3UTR CCA 72 bp CAGACGGGGCGCCAAGCGCAGGGTGCTCCTCTACTGTaGCACGTGCATTTGGACCCACACGCTGGAGGCTGT +
Preference number: 3 (lower is better)
Translates to: QTGRQAQGAPLL*HVHLDPHAGGC
Trigger: ACAGCCTCCAGCGTGTGGGTCCAAATGCACGTGCCACAGTAGAGGAGCACCCTGCGCTTGGCGCCCCGTCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR GCA 72 bp GTGGCACGTGCATTTGGACCCACACGCTGGAGGCTGTaGTTTGGCTTTCTCAGCCCACGAGGCTCACCAGGC +
Preference number: 3 (lower is better)
Translates to: VARAFGPTRWRL*FGFLSPRGSPG
Trigger: GCCTGGTGAGCCTCGTGGGCTGAGAAAGCCAAAGCACAGCCTCCAGCGTGTGGGTCCAAATGCACGTGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR GCA 72 bp CATGAGCTCACGATTAGGAGCCTTGAGCACGGTGACTaGACCGGCGCTGTGCACCTGGAAGTGTGTGGGCGG +
Preference number: 3 (lower is better)
Translates to: HELTIRSLEHGD*TGAVHLEVCGR
Trigger: CCGCCCACACACTTCCAGGTGCACAGCGCCGGTGCAGTCACCGTGCTCAAGGCTCCTAATCGTGAGCTCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000144348.8
3UTR GCA 72 bp CTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTaGGCGCGCGCGCGCGAGTGTGAGAATCCAGGAGGA +
Preference number: 3 (lower is better)
Translates to: LVCVCVCVCVCV*ARARECENPGG
Trigger: TCCTCCTGGATTCTCACACTCGCGCGCGCGCGCGCACACACACACACACACACACACACACACACACACGAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR TCA 72 bp GGGCTTGCATCTAGCCTCTGTCTTCGAGGACTTTCCTaGCCAGCCACCCACCCAGAGGTCGCTGCATCAGGA +
Preference number: 3 (lower is better)
Translates to: GLASSLCLRGLS*PATHPEVAASG
Trigger: TCCTGATGCAGCGACCTCTGGGTGGGTGGCTGGTCAGGAAAGTCCTCGAAGACAGAGGCTAGATGCAAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR GCA 72 bp GCTGGCAAAGCAGCTGGCAGTGAGAAGTGTGGGCACTaGTGCAGATCAGGGGGAGTGCTGCAGTCTGAAAGG +
Preference number: 3 (lower is better)
Translates to: AGKAAGSEKCGH*CRSGGVLQSER
Trigger: CCTTTCAGACTGCAGCACTCCCCCTGATCTGCAGCAGTGCCCACACTTCTCACTGCCAGCTGCTTTGCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR GCA 72 bp GAGAGCCGGCACTTCCAAGGGGGTGGGGCATCTCCCTaGATTTGGTCTCAGGGAGGCTCTGGAATAGCAGTA +
Preference number: 3 (lower is better)
Translates to: ESRHFQGGGASP*IWSQGGSGIAV
Trigger: TACTGCTATTCCAGAGCCTCCCTGAGACCAAATGCAGGGAGATGCCCCACCCCCTTGGAAGTGCCGGCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR CCA 72 bp TATGGTGACCTTGTGACCCTGGAAGCAGCCACACTGTaGCGCCCTGCACATTCCTCCACAGTGCTGCCCTTG +
Preference number: 3 (lower is better)
Translates to: YGDLVTLEAATL*RPAHSSTVLPL
Trigger: CAAGGGCAGCACTGTGGAGGAATGTGCAGGGCGCCACAGTGTGGCTGCTTCCAGGGTCACAAGGTCACCATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR CCA 72 bp TCCTCTACTGTGGCACGTGCATTTGGACCCACACGCTaGAGGCTGTGCTTTGGCTTTCTCAGCCCACGAGGC +
Preference number: 3 (lower is better)
Translates to: SSTVARAFGPTR*RLCFGFLSPRG
Trigger: GCCTCGTGGGCTGAGAAAGCCAAAGCACAGCCTCCAGCGTGTGGGTCCAAATGCACGTGCCACAGTAGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR-3UTR CAA 90 bp GGCACGTGCATTTGGACCCACACGCTGGAGGCTGTGCTTTGGCTTTCTCAGCCCCCAAGCCAGCCAGAGTaGGAGAATGGTGTCTACAAG +
Preference number: 3 (lower is better)
Translates to: GTCIWTHTLEAVLWLSQPPSQPE*ENGVYK
Trigger: CTTGTAGACACCATTCTCCAACTCTGGCTGGCTTGG...GGGCTGAGAAAGCCAAAGCACAGCCTCCAGCGTGTGGGTCCAAATGCACGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR TCA 72 bp CAATCTGGGACAGACAGCTGGCAAAGCAGCTGGCAGTaGGAAGTGTGGGCACTGCTGCAGATCAGGGGGAGT +
Preference number: 3 (lower is better)
Translates to: QSGTDSWQSSWQ*EVWALLQIRGS
Trigger: ACTCCCCCTGATCTGCAGCAGTGCCCACACTTCTCACTGCCAGCTGCTTTGCCAGCTGTCTGTCCCAGATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR TCA 72 bp GTTCAGATGAAAAGCAGCACGAGGCAGTCCCTGACATaGGGGGTACCTGCCACGGTGGCTGGGAGAAGTCTG +
Preference number: 3 (lower is better)
Translates to: VQMKSSTRQSLT*GVPATVAGRSL
Trigger: CAGACTTCTCCCAGCCACCGTGGCAGGTACCCCTCATGTCAGGGACTGCCTCGTGCTGCTTTTCATCTGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR TCA 72 bp TGCTGTTCGGGTGTTATCACGGCTAGAAGTAGCCCCTaGGGCTACCTGGGTGAGCAGAGGAGAGGGACAGTC +
Preference number: 3 (lower is better)
Translates to: CCSGVITARSSP*GYLGEQRRGTV
Trigger: GACTGTCCCTCTCCTCTGCTCACCCAGGTAGCCTCAGGGGCTACTTCTAGCCGTGATAACACCCGAACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR TCA 72 bp CTGATCACCCAGGAGGACTGCTGGAGCATGGCTGTCTaGCATCGCACTGGTCGTGACGTGGGTCCTACAGTA +
Preference number: 3 (lower is better)
Translates to: LITQEDCWSMAV*HRTGRDVGPTV
Trigger: TACTGTAGGACCCACGTCACGACCAGTGCGATGTCAGACAGCCATGCTCCAGCAGTCCTCCTGGGTGATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR GCA 72 bp CAGAGACTAGAACTCACCACTCCAGGTGCTTCCAGATaGAGGAAGCTGGCAGTCAGCCCCACTCCAGCTGTC +
Preference number: 3 (lower is better)
Translates to: QRLELTTPGASR*RKLAVSPTPAV
Trigger: GACAGCTGGAGTGGGGCTGACTGCCAGCTTCCTGCATCTGGAAGCACCTGGAGTGGTGAGTTCTAGTCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR GCA 72 bp CCAGGCAACACAGAGACTAGAACTCACCACTCCAGGTaGTTCCAGATGCAGGAAGCTGGCAGTCAGCCCCAC +
Preference number: 3 (lower is better)
Translates to: PGNTETRTHHSR*FQMQEAGSQPH
Trigger: GTGGGGCTGACTGCCAGCTTCCTGCATCTGGAAGCACCTGGAGTGGTGAGTTCTAGTCTCTGTGTTGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR GCA 72 bp CCCACGAGGCTCACCAGGCAGGAGCCATGCGTTGCATaGTGGGTAAAGGTTCAGATGAAAAGCAGCACGAGG +
Preference number: 3 (lower is better)
Translates to: PTRLTRQEPCVA*WVKVQMKSSTR
Trigger: CCTCGTGCTGCTTTTCATCTGAACCTTTACCCAGCATGCAACGCATGGCTCCTGCCTGGTGAGCCTCGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR CCA 72 bp CGGCACTTCCAAGGGGGTGGGGCATCTCCCTGCATTTaGTCTCAGGGAGGCTCTGGAATAGCAGTAAGACCA +
Preference number: 3 (lower is better)
Translates to: RHFQGGGASPCI*SQGGSGIAVRP
Trigger: TGGTCTTACTGCTATTCCAGAGCCTCCCTGAGACCAAATGCAGGGAGATGCCCCACCCCCTTGGAAGTGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR CCA 72 bp CAGAGGAGAGGGACAGTCAAGGCTAAGAGGAAAAGGTaGCACAAGAGGGACCTGCAATCTGGGAGGCTCGGG +
Preference number: 3 (lower is better)
Translates to: QRRGTVKAKRKR*HKRDLQSGRLG
Trigger: CCCGAGCCTCCCAGATTGCAGGTCCCTCTTGTGCCACCTTTTCCTCTTAGCCTTGACTGTCCCTCTCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR-3UTR CAA 90 bp TCGGGCTTGCATCTAGCCTCTGTCTTCGAGGACTTTCCTGACCAGCCACCCACCGGCCCCAGATCCCTGTaGAAGACAAGGATAATCCAG +
Preference number: 3 (lower is better)
Translates to: SGLHLASVFEDFPDQPPTGPRSL*KTRIIQ
Trigger: CTGGATTATCCTTGTCTTCAACAGGGATCTGGGGCC...GGTGGGTGGCTGGTCAGGAAAGTCCTCGAAGACAGAGGCTAGATGCAAGCCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR GCA 72 bp TCAGCCCACGAGGCTCACCAGGCAGGAGCCATGCGTTaGATGCTGGGTAAAGGTTCAGATGAAAAGCAGCAC +
Preference number: 3 (lower is better)
Translates to: SAHEAHQAGAMR*MLGKGSDEKQH
Trigger: GTGCTGCTTTTCATCTGAACCTTTACCCAGCATGCAACGCATGGCTCCTGCCTGGTGAGCCTCGTGGGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR GCA 72 bp ACAGTCATTTGGCAGTGTGCCCTCAAGTCCCCTAGTTaGCCACAGGAGCAGAGCCTCATACATCGGGCTTGC +
Preference number: 3 (lower is better)
Translates to: TVIWQCALKSPS*PQEQSLIHRAC
Trigger: GCAAGCCCGATGTATGAGGCTCTGCTCCTGTGGGCAACTAGGGGACTTGAGGGCACACTGCCAAATGACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR CCA 72 bp GCAGCTCCTGGAGATGTGTTTAGCCCCACTGCAATCTaGGACAGACAGCTGGCAAAGCAGCTGGCAGTGAGA +
Preference number: 3 (lower is better)
Translates to: AAPGDVFSPTAI*DRQLAKQLAVR
Trigger: TCTCACTGCCAGCTGCTTTGCCAGCTGTCTGTCCCAGATTGCAGTGGGGCTAAACACATCTCCAGGAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR CCA 72 bp ACGAGGCTCACCAGGCAGGAGCCATGCGTTGCATGCTaGGTAAAGGTTCAGATGAAAAGCAGCACGAGGCAG +
Preference number: 3 (lower is better)
Translates to: TRLTRQEPCVAC*VKVQMKSSTRQ
Trigger: CTGCCTCGTGCTGCTTTTCATCTGAACCTTTACCCAGCATGCAACGCATGGCTCCTGCCTGGTGAGCCTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR TCA 72 bp CACTCCAGCTGTCAGGCAGGAGAGATTCTAGAGCCCTaGATCCAGGAGCCCACAAGCCACAGATCTGAGAGT +
Preference number: 3 (lower is better)
Translates to: HSSCQAGEILEP*IQEPTSHRSES
Trigger: ACTCTCAGATCTGTGGCTTGTGGGCTCCTGGATTCAGGGCTCTAGAATCTCTCCTGCCTGACAGCTGGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR GCA 72 bp AGAGGGCTCCCACGCCAGCCTGGGAGGCCAGTTGTGTaGTTGCTTTTTAAAGAGGTCCCTCTTCTTATGGTG +
Preference number: 3 (lower is better)
Translates to: RGLPRQPGRPVV*LLFKEVPLLMV
Trigger: CACCATAAGAAGAGGGACCTCTTTAAAAAGCAAGCACACAACTGGCCTCCCAGGCTGGCGTGGGAGCCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR GCA 72 bp GTGAGAAGTGTGGGCACTGCTGCAGATCAGGGGGAGTaGTGCAGTCTGAAAGGCTACATAGGAGAGCAAAGG +
Preference number: 3 (lower is better)
Translates to: VRSVGTAADQGE*CSLKGYIGEQR
Trigger: CCTTTGCTCTCCTATGTAGCCTTTCAGACTGCAGCACTCCCCCTGATCTGCAGCAGTGCCCACACTTCTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR CCA 72 bp TGGGAGAAGATGGCTCAGTCACCGGAGCCTTGCCTCTaGGACAAGCATCTGCCATTTTGTCCCCAAACTGGA +
Preference number: 3 (lower is better)
Translates to: WEKMAQSPEPCL*DKHLPFCPQTG
Trigger: TCCAGTTTGGGGACAAAATGGCAGATGCTTGTCCCAGAGGCAAGGCTCCGGTGACTGAGCCATCTTCTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR CCA 72 bp GCTCTCCAGGGGCAGCTTCCACAGCGAGCACAGTTCTaGCTTTTTCTGCAGAAGGATTTGGGTGCTGGGAAA +
Preference number: 3 (lower is better)
Translates to: ALQGQLPQRAQF*LFLQKDLGAGK
Trigger: TTTCCCAGCACCCAAATCCTTCTGCAGAAAAAGCCAGAACTGTGCTCGCTGTGGAAGCTGCCCCTGGAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000144348.8
3UTR-3UTR CAA 90 bp GGCACGTGCATTTGGACCCACACGCTGGAGGCTGTGCTTTGGCTTTCTCAGCCCGTGCCTTTGCTACTTTaGGTTATGAAGGAAGGCAAG +
Preference number: 3 (lower is better)
Translates to: GTCIWTHTLEAVLWLSQPVPLLL*VMKEGK
Trigger: CTTGCCTTCCTTCATAACCAAAAGTAGCAAAGGCAC...GGGCTGAGAAAGCCAAAGCACAGCCTCCAGCGTGTGGGTCCAAATGCACGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR-3UTR CAA 90 bp TCGGGCTTGCATCTAGCCTCTGTCTTCGAGGACTTTCCTGACCAGCCACCCACCAGGCCAGTTGTGTGCTaGCTTTTTAAAGAGGTCCCT +
Preference number: 3 (lower is better)
Translates to: SGLHLASVFEDFPDQPPTRPVVC*LFKEVP
Trigger: AGGGACCTCTTTAAAAAGCAAGCACACAACTGGCCT...GGTGGGTGGCTGGTCAGGAAAGTCCTCGAAGACAGAGGCTAGATGCAAGCCCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR-3UTR CAA 90 bp TCGGGCTTGCATCTAGCCTCTGTCTTCGAGGACTTTCCTGACCAGCCACCCACCCAAGCATCTGCCATTTaGTCCCCAAACTGGAAAGAG +
Preference number: 3 (lower is better)
Translates to: SGLHLASVFEDFPDQPPTQASAI*SPNWKE
Trigger: CTCTTTCCAGTTTGGGGACAAAATGGCAGATGCTTG...GGTGGGTGGCTGGTCAGGAAAGTCCTCGAAGACAGAGGCTAGATGCAAGCCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR-3UTR CAA 90 bp CGGTCTCCCACCAGCTCTCCAGGGGCAGCTTCCACAGCGAGCACAGTTCTGGCTTTTCTGCAGAAGGATTaGGGTGCTGGGAAATTATAT +
Preference number: 3 (lower is better)
Translates to: RSPTSSPGAASTASTVLAFLQKD*GAGKLY
Trigger: ATATAATTTCCCAGCACCCAAATCCTTCTGCAGAAA...AGCCAGAACTGTGCTCGCTGTGGAAGCTGCCCCTGGAGAGCTGGTGGGAGACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000144348.8
3UTR TCA 72 bp CTTTTTAAAGAGGTCCCTCTTCTTATGGTGACCTTGTaGCCCTGGAAGCAGCCACACTGTGGCGCCCTGCAC +
Preference number: 3 (lower is better)
Translates to: LFKEVPLLMVTL*PWKQPHCGALH
Trigger: GTGCAGGGCGCCACAGTGTGGCTGCTTCCAGGGTCACAAGGTCACCATAAGAAGAGGGACCTCTTTAAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR TCA 72 bp AGAGCCCTGAATCCAGGAGCCCACAAGCCACAGATCTaGGAGTTTCCTATGTTCCCTTATGCAGGGCTGGGT +
Preference number: 3 (lower is better)
Translates to: RALNPGAHKPQI*EFPMFPYAGLG
Trigger: ACCCAGCCCTGCATAAGGGAACATAGGAAACTCTCAGATCTGTGGCTTGTGGGCTCCTGGATTCAGGGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR GCA 72 bp GTTTTTGTGGGGCGAAACACGCACACAACTGGCAGATaGTGTAAACAGGCCCTTGGAAACAGTCACCCGGTG +
Preference number: 3 (lower is better)
Translates to: VFVGRNTHTTGR*CKQALGNSHPV
Trigger: CACCGGGTGACTGTTTCCAAGGGCCTGTTTACAGCATCTGCCAGTTGTGTGCGTGTTTCGCCCCACAAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR GCA 72 bp AGAAGTGTGGGCACTGCTGCAGATCAGGGGGAGTGCTaGAGTCTGAAAGGCTACATAGGAGAGCAAAGGCTA +
Preference number: 3 (lower is better)
Translates to: RSVGTAADQGEC*SLKGYIGEQRL
Trigger: TAGCCTTTGCTCTCCTATGTAGCCTTTCAGACTGCAGCACTCCCCCTGATCTGCAGCAGTGCCCACACTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR GCA 72 bp AGTTTCCTATGTTCCCTTATGCAGGGCTGGGTCTACTaGAAGGTCCCTTTGGAACCCCAAGCCAGCCAGAGT +
Preference number: 3 (lower is better)
Translates to: SFLCSLMQGWVY*KVPLEPQASQS
Trigger: ACTCTGGCTGGCTTGGGGTTCCAAAGGGACCTTGCAGTAGACCCAGCCCTGCATAAGGGAACATAGGAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR GCA 72 bp AGAAAGAGGGTGAGGCTGGAAGGACAAGCCCAGTCCTaGATCTGGAAGCTTTGTCATCCCAGACACACACAC +
Preference number: 3 (lower is better)
Translates to: RKRVRLEGQAQS*IWKLCHPRHTH
Trigger: GTGTGTGTGTCTGGGATGACAAAGCTTCCAGATGCAGGACTGGGCTTGTCCTTCCAGCCTCACCCTCTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR CCA 72 bp CCTCTGGGACAAGCATCTGCCATTTTGTCCCCAAACTaGAAAGAGGGCAAGCCCTCCTTCTCAGCTCTGAAG +
Preference number: 3 (lower is better)
Translates to: PLGQASAILSPN*KEGKPSFSALK
Trigger: CTTCAGAGCTGAGAAGGAGGGCTTGCCCTCTTTCCAGTTTGGGGACAAAATGGCAGATGCTTGTCCCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR CCA 72 bp AGATCTGAGAGTTTCCTATGTTCCCTTATGCAGGGCTaGGTCTACTGCAAGGTCCCTTTGGAACCCCAAGCC +
Preference number: 3 (lower is better)
Translates to: RSESFLCSLMQG*VYCKVPLEPQA
Trigger: GGCTTGGGGTTCCAAAGGGACCTTGCAGTAGACCCAGCCCTGCATAAGGGAACATAGGAAACTCTCAGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR TCA 72 bp TGTGCTTGCTTTTTAAAGAGGTCCCTCTTCTTATGGTaGCCTTGTGACCCTGGAAGCAGCCACACTGTGGCG +
Preference number: 3 (lower is better)
Translates to: CACFLKRSLFLW*PCDPGSSHTVA
Trigger: CGCCACAGTGTGGCTGCTTCCAGGGTCACAAGGTCACCATAAGAAGAGGGACCTCTTTAAAAAGCAAGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR TCA 72 bp GCAGTAAGACCACTGTCCAGCTCCAGACAAGCTTCCTaGAGAAACCAGGCCTCAAACCACCATCCTAAAGAC +
Preference number: 3 (lower is better)
Translates to: AVRPLSSSRQAS*RNQASNHHPKD
Trigger: GTCTTTAGGATGGTGGTTTGAGGCCTGGTTTCTTCAGGAAGCTTGTCTGGAGCTGGACAGTGGTCTTACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR TCA 72 bp GCACACCCCTTGTGTGTGTCCTTAACACTGTGTGCGTaGCTGCAGGAAGCTCATGAGGACTGTTTGCATTTG +
Preference number: 3 (lower is better)
Translates to: AHPLCVSLTLCA*LQEAHEDCLHL
Trigger: CAAATGCAAACAGTCCTCATGAGCTTCCTGCAGTCACGCACACAGTGTTAAGGACACACACAAGGGGTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR GCA 72 bp CAAGCCACAGATCTGAGAGTTTCCTATGTTCCCTTATaGAGGGCTGGGTCTACTGCAAGGTCCCTTTGGAAC +
Preference number: 3 (lower is better)
Translates to: QATDLRVSYVPL*RAGSTARSLWN
Trigger: GTTCCAAAGGGACCTTGCAGTAGACCCAGCCCTGCATAAGGGAACATAGGAAACTCTCAGATCTGTGGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR GCA 72 bp GCACATGTTCTAAGCCATGTCCCCGGCATCACCAGGTaGTTTAAAGACTCCTCCACCAGCATACAGGACAAA +
Preference number: 3 (lower is better)
Translates to: AHVLSHVPGITR*FKDSSTSIQDK
Trigger: TTTGTCCTGTATGCTGGTGGAGGAGTCTTTAAAGCACCTGGTGATGCCGGGGACATGGCTTAGAACATGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR CCA 72 bp CTCTCAGGGAATGGCAGAACAGGACCCCATGCATATTaGAGATTTTCGTTTCCAATCACTGGGCTGGAACCC +
Preference number: 3 (lower is better)
Translates to: LSGNGRTGPHAY*RFSFPITGLEP
Trigger: GGGTTCCAGCCCAGTGATTGGAAACGAAAATCTCCAATATGCATGGGGTCCTGTTCTGCCATTCCCTGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR CCA 72 bp GAGTCAGGCGATCAGATGAAACCATGTGATGAGACTTaGCCTGGCACCAGAAACAGCGCAGGCATACTGTTT +
Preference number: 3 (lower is better)
Translates to: ESGDQMKPCDET*PGTRNSAGILF
Trigger: AAACAGTATGCCTGCGCTGTTTCTGGTGCCAGGCCAAGTCTCATCACATGGTTTCATCTGATCGCCTGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR-3UTR CAA 90 bp ACAAGCCACAGATCTGAGAGTTTCCTATGTTCCCTTATGCAGGGCTGGGTCTACAGCCTGGGAGGCCAGTaGTGTGCTTGCTTTTTAAAG +
Preference number: 3 (lower is better)
Translates to: TSHRSESFLCSLMQGWVYSLGGQ*CACFLK
Trigger: CTTTAAAAAGCAAGCACACAACTGGCCTCCCAGGCT...GTAGACCCAGCCCTGCATAAGGGAACATAGGAAACTCTCAGATCTGTGGCTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR TCA 72 bp GCCCAGCAGAAGCCAGAGGCTGTAGATGTTACAATCTaGCAGCTGATGTGCAGTGATGTGCCTTTGCTACTT +
Preference number: 3 (lower is better)
Translates to: AQQKPEAVDVTI*QLMCSDVPLLL
Trigger: AAGTAGCAAAGGCACATCACTGCACATCAGCTGTCAGATTGTAACATCTACAGCCTCTGGCTTCTGCTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR TCA 72 bp CAGACCACAGCTAACAAACACCAGAGAAGTACATGCTaGCCAGTGACTGCTGTTCGGGTGTTATCACGGCTA +
Preference number: 3 (lower is better)
Translates to: QTTANKHQRSTC*PVTAVRVLSRL
Trigger: TAGCCGTGATAACACCCGAACAGCAGTCACTGGTCAGCATGTACTTCTCTGGTGTTTGTTAGCTGTGGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR GCA 72 bp ATGCCGTCTCTCAGGGAATGGCAGAACAGGACCCCATaGATATTGGAGATTTTCGTTTCCAATCACTGGGCT +
Preference number: 3 (lower is better)
Translates to: MPSLREWQNRTP*ILEIFVSNHWA
Trigger: AGCCCAGTGATTGGAAACGAAAATCTCCAATATGCATGGGGTCCTGTTCTGCCATTCCCTGAGAGACGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR CCA 72 bp AATTTACACCAAATGCACATCTGGACTGGCATCTTCTaGTACGAAACTGACATGGCAACTGAGCCCTGGGGC +
Preference number: 3 (lower is better)
Translates to: NLHQMHIWTGIF*YETDMATEPWG
Trigger: GCCCCAGGGCTCAGTTGCCATGTCAGTTTCGTACCAGAAGATGCCAGTCCAGATGTGCATTTGGTGTAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR-3UTR CAA 90 bp GGTAAAGACAGTCTCCGTGATGAGGGAATGGGAGAAGATGGCTCAGTCACCGGATGCAGTGATGTGCCTTaGCTACTTTTGGTTATGAAG +
Preference number: 3 (lower is better)
Translates to: GKDSLRDEGMGEDGSVTGCSDVP*LLLVMK
Trigger: CTTCATAACCAAAAGTAGCAAAGGCACATCACTGCA...TCCGGTGACTGAGCCATCTTCTCCCATTCCCTCATCACGGAGACTGTCTTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR-3UTR CAA 90 bp ACAAGGATAATCCAGGCAACACAGAGACTAGAACTCACCACTCCAGGTGCTTCCTCCACAGTGCTGCCCTaGGGTAAAAGAAAGAGCATA +
Preference number: 3 (lower is better)
Translates to: TRIIQATQRLELTTPGASSTVLP*GKRKSI
Trigger: TATGCTCTTTCTTTTACCCAAGGGCAGCACTGTGGA...GGAAGCACCTGGAGTGGTGAGTTCTAGTCTCTGTGTTGCCTGGATTATCCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR GCA 72 bp TGTGTGCGTGACTGCAGGAAGCTCATGAGGACTGTTTaGATTTGCATAAATCCAGGAGGATCACTAGGACTC +
Preference number: 3 (lower is better)
Translates to: CVRDCRKLMRTV*ICINPGGSLGL
Trigger: GAGTCCTAGTGATCCTCCTGGATTTATGCAAATGCAAACAGTCCTCATGAGCTTCCTGCAGTCACGCACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR CCA 72 bp ATGCATATTGGAGATTTTCGTTTCCAATCACTGGGCTaGAACCCAGAGTCCCACACACCAGGCACATGTTCT +
Preference number: 3 (lower is better)
Translates to: MHIGDFRFQSLG*NPESHTPGTCS
Trigger: AGAACATGTGCCTGGTGTGTGGGACTCTGGGTTCCAGCCCAGTGATTGGAAACGAAAATCTCCAATATGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR-3UTR CAA 90 bp GGCAGCTTCCACAGCGAGCACAGTTCTGGCTTTTTCTGCAGAAGGATTTGGGTGATCATGTCAAGGCTGTaGCAATATTCCCATCTTTTC +
Preference number: 3 (lower is better)
Translates to: GSFHSEHSSGFFCRRIWVIMSRL*QYSHLF
Trigger: GAAAAGATGGGAATATTGCAACAGCCTTGACATGAT...CACCCAAATCCTTCTGCAGAAAAAGCCAGAACTGTGCTCGCTGTGGAAGCTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000144348.8
3UTR TCA 72 bp TCTCATGACAGTCACCCATCAGCGATGCGCTGGGACTaGGCAAAAATAACCTTTCTTGTTCAAACCCTCTCT +
Preference number: 3 (lower is better)
Translates to: SHDSHPSAMRWD*AKITFLVQTLS
Trigger: AGAGAGGGTTTGAACAAGAAAGGTTATTTTTGCTCAGTCCCAGCGCATCGCTGATGGGTGACTGTCATGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR GCA 72 bp AATGGGTCATGGAAAAAGCGCTTCTCGAAACTGTCTTaGTCCGCTCCTGAGTCTGAGTGTGTTTACACTAAG +
Preference number: 3 (lower is better)
Translates to: NGSWKKRFSKLS*SAPESECVYTK
Trigger: CTTAGTGTAAACACACTCAGACTCAGGAGCGGAGCAAGACAGTTTCGAGAAGCGCTTTTTCCATGACCCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR CCA 72 bp AGCAACCCGCCAGTAAATTTACACCAAATGCACATCTaGACTGGCATCTTCTGGTACGAAACTGACATGGCA +
Preference number: 3 (lower is better)
Translates to: SNPPVNLHQMHI*TGIFWYETDMA
Trigger: TGCCATGTCAGTTTCGTACCAGAAGATGCCAGTCCAGATGTGCATTTGGTGTAAATTTACTGGCGGGTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR CCA 72 bp TGGATGGCCTTTCTGGCCTCCAAGGGTTCTTACATGTaGTACACATTAAACTCACACAAGCACACAGGCATA +
Preference number: 3 (lower is better)
Translates to: WMAFLASKGSYM*YTLNSHKHTGI
Trigger: TATGCCTGTGTGCTTGTGTGAGTTTAATGTGTACCACATGTAAGAACCCTTGGAGGCCAGAAAGGCCATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR CCA 72 bp GTAGTTAAGAGCATTTATATGCTCTTGAAGAGGACCTaGGTCTGGTTCCCACCTCCCACATGTCAGTTTGCA +
Preference number: 3 (lower is better)
Translates to: VVKSIYMLLKRT*VWFPPPTCQFA
Trigger: TGCAAACTGACATGTGGGAGGTGGGAACCAGACCCAGGTCCTCTTCAAGAGCATATAAATGCTCTTAACTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR-3UTR CAA 90 bp AAACAAACAAACAAACAGGCAGGTGTGCTCCTGCACACCCCTTGTGTGTGTCCTGAAAATGTTCTAAAATaGAGTCAGCCCACACATGTC +
Preference number: 3 (lower is better)
Translates to: KQTNKQAGVLLHTPCVCPENVLK*SQPTHV
Trigger: GACATGTGTGGGCTGACTCAATTTTAGAACATTTTC...AGGACACACACAAGGGGTGTGCAGGAGCACACCTGCCTGTTTGTTTGTTTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR-3UTR CAA 90 bp GAGAATAAGGCAAAGGATATAGGAGGGGCTCTGATGTTCACATATGGGTGCAGATGTTGGAAGAGCTGTTaGGGTCTTGGGCTATATATG +
Preference number: 3 (lower is better)
Translates to: ENKAKDIGGALMFTYGCRCWKSC*GLGLYM
Trigger: CATATATAGCCCAAGACCCAAACAGCTCTTCCAACA...TCTGCACCCATATGTGAACATCAGAGCCCCTCCTATATCCTTTGCCTTATTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR TCA 72 bp AGCCCACACATGTCTATAATCCCAGATTCAGGAAGCTaGGAAAGGAGTAGAGTTGCAAGTTCAAGACTAGCC +
Preference number: 3 (lower is better)
Translates to: SPHMSIIPDSGS*ERSRVASSRLA
Trigger: GGCTAGTCTTGAACTTGCAACTCTACTCCTTTCTCAGCTTCCTGAATCTGGGATTATAGACATGTGTGGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR TCA 72 bp GATGTTGGAAGAGCTGTTTGGGTCTTGGGCTATATATaGGAGGGAATACGAGCTGCATACAACACACATGCA +
Preference number: 3 (lower is better)
Translates to: DVGRAVWVLGYI*EGIRAAYNTHA
Trigger: TGCATGTGTGTTGTATGCAGCTCGTATTCCCTCTCATATATAGCCCAAGACCCAAACAGCTCTTCCAACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR TCA 72 bp TGCTACACATTCATAAAGAGAACTCTCATATGGGGCTaGCACAGTATGTCAGACAGAAAAACTGGGCCAGCC +
Preference number: 3 (lower is better)
Translates to: CYTFIKRTLIWG*HSMSDRKTGPA
Trigger: GGCTGGCCCAGTTTTTCTGTCTGACATACTGTGTCAGCCCCATATGAGAGTTCTCTTTATGAATGTGTAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR GCA 72 bp AAGTCCTGCTGTCCCACTTCATCATGTCAAGGCTGTTaGAATATTCCCATCTTTTCTGCTGAAGCTCCTGTA +
Preference number: 3 (lower is better)
Translates to: KSCCPTSSCQGC*NIPIFSAEAPV
Trigger: TACAGGAGCTTCAGCAGAAAAGATGGGAATATTGCAACAGCCTTGACATGATGAAGTGGGACAGCAGGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000144348.8
3UTR-3UTR CAA 90 bp GAGAATAAGGCAAAGGATATAGGAGGGGCTCTGATGTTCACATATGGGTGCAGAATGCATTCCTTCTGTTaGCTCTTGTCTGAGGATTTG +
Preference number: 3 (lower is better)
Translates to: ENKAKDIGGALMFTYGCRMHSFC*LLSEDL
Trigger: CAAATCCTCAGACAAGAGCAAACAGAAGGAATGCAT...TCTGCACCCATATGTGAACATCAGAGCCCCTCCTATATCCTTTGCCTTATTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR TCA 72 bp GGCTGTAGATGTTACAATCTGACAGCTGATGTGCAGTaGTGTGCCTTTGCTACTTTTGGTTATGAAGGAAGG +
Preference number: 3 (lower is better)
Translates to: GCRCYNLTADVQ*CAFATFGYEGR
Trigger: CCTTCCTTCATAACCAAAAGTAGCAAAGGCACATCACTGCACATCAGCTGTCAGATTGTAACATCTACAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR GCA 72 bp ACGAGCTGCATACAACACACATGCATTCCTTCTGTTTaGTCTTGTCTGAGGATTTGCCTAGCTATTTCAGGA +
Preference number: 3 (lower is better)
Translates to: TSCIQHTCIPSV*SCLRICLAISG
Trigger: TCCTGAAATAGCTAGGCAAATCCTCAGACAAGAGCAAACAGAAGGAATGCATGTGTGTTGTATGCAGCTCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR-3UTR CAA 90 bp GCTCATGAGGACTGTTTGCATTTGCATAAATCCAGGAGGATCACTAGGACTCGTTTGATTACATTGATGTaGGAAGAGCTGTTTGGGTCT +
Preference number: 3 (lower is better)
Translates to: AHEDCLHLHKSRRITRTRLITLM*EELFGS
Trigger: AGACCCAAACAGCTCTTCCAACATCAATGTAATCAA...ACGAGTCCTAGTGATCCTCCTGGATTTATGCAAATGCAAACAGTCCTCATGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR TCA 72 bp TCTTGTCTGAGGATTTGCCTAGCTATTTCAGGATCTTaGCACCCTGACTTCCCCACAATTATGGAGTATAAC +
Preference number: 3 (lower is better)
Translates to: SCLRICLAISGS*HPDFPTIMEYN
Trigger: GTTATACTCCATAATTGTGGGGAAGTCAGGGTGTCAAGATCCTGAAATAGCTAGGCAAATCCTCAGACAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR GCA 72 bp TATATGAGAGGGAATACGAGCTGCATACAACACACATaGATTCCTTCTGTTTGCTCTTGTCTGAGGATTTGC +
Preference number: 3 (lower is better)
Translates to: YMRGNTSCIQHT*IPSVCSCLRIC
Trigger: GCAAATCCTCAGACAAGAGCAAACAGAAGGAATGCATGTGTGTTGTATGCAGCTCGTATTCCCTCTCATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR GCA 72 bp CAAAAACTTGCACATAGGGTTTGTAGGAACACTAATTaGAACAGTGAACAAGTAGAGGGACTGGAGAGATGG +
Preference number: 3 (lower is better)
Translates to: QKLAHRVCRNTN*NSEQVEGLERW
Trigger: CCATCTCTCCAGTCCCTCTACTTGTTCACTGTTGCAATTAGTGTTCCTACAAACCCTATGTGCAAGTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR CCA 72 bp TTGATTACATTGATGTTGGAAGAGCTGTTTGGGTCTTaGGCTATATATGAGAGGGAATACGAGCTGCATACA +
Preference number: 3 (lower is better)
Translates to: LITLMLEELFGS*AIYEREYELHT
Trigger: TGTATGCAGCTCGTATTCCCTCTCATATATAGCCCAAGACCCAAACAGCTCTTCCAACATCAATGTAATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR-3UTR CAA 90 bp TTCAGAATAAACAAATCCAACACAGATAGAAAGTGGATTTGCCTAGGACTGAGGAGAGGCAGGAAAGGATaGTATAAAAGCTGTCTGTTG +
Preference number: 3 (lower is better)
Translates to: FRINKSNTDRKWICLGLRRGRKG*YKSCLL
Trigger: CAACAGACAGCTTTTATACAATCCTTTCCTGCCTCT...CCTCAGTCCTAGGCAAATCCACTTTCTATCTGTGTTGGATTTGTTTATTCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR TCA 72 bp TTTTCAAAGATTCTGTGGCCACCAAGTGTATTGCTGTaGACATCGACGGATCACCTCCATTTAAGTAATACA +
Preference number: 3 (lower is better)
Translates to: FSKILWPPSVLL*TSTDHLHLSNT
Trigger: TGTATTACTTAAATGGAGGTGATCCGTCGATGTTCACAGCAATACACTTGGTGGCCACAGAATCTTTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
CDS-3UTR GCA 90 bp TCCAGAAGGGACTGCGGCTGGCAGTGCCAAGCCACCAGCAGAGGGCTCCCACGCACACGAACCAGCGGCTaGGGTAGCCGCGCAACGGGC +
Preference number: 4 (lower is better)
Translates to: SRRDCGWQCQATSRGLPRTRTSG*GSRATG
Trigger: GCCCGTTGCGCGGCTACCGCAGCCGCTGGTTCGTGT...GCGTGGGAGCCCTCTGCTGGTGGCTTGGCACTGCCAGCCGCAGTCCCTTCTGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CCA 90 bp TCCAGAAGGGACTGCGGCTGGCAGTGCCAAGCCACCAGCAGAGGGCTCCCACGCCCGAACCTCTCCAGCTaGCCGCTGAGGCCCAGGATC +
Preference number: 4 (lower is better)
Translates to: SRRDCGWQCQATSRGLPRPNLSS*PLRPRI
Trigger: GATCCTGGGCCTCAGCGGCCAGCTGGAGAGGTTCGG...GCGTGGGAGCCCTCTGCTGGTGGCTTGGCACTGCCAGCCGCAGTCCCTTCTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR TCA 90 bp CTCACGATTAGGAGCCTTGAGCACGGTGACTGCACCGGCGCTGTGCACCTGGAACGCGGCCCTGGTAGCTaGAGCAGGCGTCGGCGATGT +
Preference number: 4 (lower is better)
Translates to: LTIRSLEHGDCTGAVHLERGPGS*SRRRRC
Trigger: ACATCGCCGACGCCTGCTTCAGCTACCAGGGCCGCG...TTCCAGGTGCACAGCGCCGGTGCAGTCACCGTGCTCAAGGCTCCTAATCGTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000144348.8
CDS-3UTR GCA 90 bp TCGGGCTTGCATCTAGCCTCTGTCTTCGAGGACTTTCCTGACCAGCCACCCACCGTGTGTGGGCGGATCTaGTCCGGGCTCCGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: SGLHLASVFEDFPDQPPTVCGRI*SGLRSL
Trigger: GAGGCTGCGGAGCCCGGAGCAGATCCGCCCACACAC...GGTGGGTGGCTGGTCAGGAAAGTCCTCGAAGACAGAGGCTAGATGCAAGCCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CCA 90 bp TCCAGAAGGGACTGCGGCTGGCAGTGCCAAGCCACCAGCAGAGGGCTCCCACGCGTCCTCACTTCCTGCTaGAGGCTTTCCTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SRRDCGWQCQATSRGLPRVLTSC*RLSFSR
Trigger: CCTGGAGAAGGAAAGCCTCCAGCAGGAAGTGAGGAC...GCGTGGGAGCCCTCTGCTGGTGGCTTGGCACTGCCAGCCGCAGTCCCTTCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR TCA 90 bp ATCCTCACTGGTCCACACAGGGTCAGAGAACAGAACCCCACAGCAGAGCCTATGCGCGGCCCTGGTAGCTaGAGCAGGCGTCGGCGATGT +
Preference number: 4 (lower is better)
Translates to: ILTGPHRVREQNPTAEPMRGPGS*SRRRRC
Trigger: ACATCGCCGACGCCTGCTTCAGCTACCAGGGCCGCG...CATAGGCTCTGCTGTGGGGTTCTGTTCTCTGACCCTGTGTGGACCAGTGAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
CDS-3UTR TCA 90 bp GGCACGTGCATTTGGACCCACACGCTGGAGGCTGTGCTTTGGCTTTCTCAGCCCCACTCAGGAGGTCTCTaGACACCCGCTGGTCCACCT +
Preference number: 4 (lower is better)
Translates to: GTCIWTHTLEAVLWLSQPHSGGL*TPAGPP
Trigger: AGGTGGACCAGCGGGTGTTCAGAGACCTCCTGAGTG...GGGCTGAGAAAGCCAAAGCACAGCCTCCAGCGTGTGGGTCCAAATGCACGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR GCA 90 bp GGGGGTGGGGCATCTCCCTGCATTTGGTCTCAGGGAGGCTCTGGAATAGCAGTACTCCCTCACCACCACTaGAGCTCTCCTCCACGCCGT +
Preference number: 4 (lower is better)
Translates to: GGGASPCIWSQGGSGIAVLPHHH*SSPPRR
Trigger: ACGGCGTGGAGGAGAGCTGCAGTGGTGGTGAGGGAG...TACTGCTATTCCAGAGCCTCCCTGAGACCAAATGCAGGGAGATGCCCCACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR GCA 90 bp GGGGGTGGGGCATCTCCCTGCATTTGGTCTCAGGGAGGCTCTGGAATAGCAGTACTTGAGCACGGTGACTaGACCGGCGCTGTGCACCTG +
Preference number: 4 (lower is better)
Translates to: GGGASPCIWSQGGSGIAVLEHGD*TGAVHL
Trigger: CAGGTGCACAGCGCCGGTGCAGTCACCGTGCTCAAG...TACTGCTATTCCAGAGCCTCCCTGAGACCAAATGCAGGGAGATGCCCCACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR GCA 90 bp GGCACGTGCATTTGGACCCACACGCTGGAGGCTGTGCTTTGGCTTTCTCAGCCCGCTCCAGCTGGTCCTTaGTGGCTGGGATGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: GTCIWTHTLEAVLWLSQPAPAGP*WLGWPK
Trigger: CTTTGGCCATCCCAGCCAGCAAGGACCAGCTGGAGC...GGGCTGAGAAAGCCAAAGCACAGCCTCCAGCGTGTGGGTCCAAATGCACGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CCA 90 bp ACGCTGGAGGCTGTGCTTTGGCTTTCTCAGCCCACGAGGCTCACCAGGCAGGAGTGGCCACAAGGCCCTTaGGAAAATCCCCTGGAGTCG +
Preference number: 4 (lower is better)
Translates to: TLEAVLWLSQPTRLTRQEWPQGP*ENPLES
Trigger: CGACTCCAGGGGATTTTCCCAAGGGCCTTGTGGCCA...CTCCTGCCTGGTGAGCCTCGTGGGCTGAGAAAGCCAAAGCACAGCCTCCAGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CCA 90 bp TTTCCTGACCAGCCACCCACCCAGAGGTCGCTGCATCAGGACACCCACTGTACTCCTTGCTGGCTGGGATaGCCAAAGGAGAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: FPDQPPTQRSLHQDTHCTPCWLG*PKESWA
Trigger: GGCCCAGCTCTCCTTTGGCCATCCCAGCCAGCAAGG...AGTACAGTGGGTGTCCTGATGCAGCGACCTCTGGGTGGGTGGCTGGTCAGGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR TCA 90 bp TCGGGCTTGCATCTAGCCTCTGTCTTCGAGGACTTTCCTGACCAGCCACCCACCCCAACAACTGGGCTATaGCATCCCTGGCAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: SGLHLASVFEDFPDQPPTPTTGL*HPWQGP
Trigger: AGGGCCCTGCCAGGGATGTCATAGCCCAGTTGTTGG...GGTGGGTGGCTGGTCAGGAAAGTCCTCGAAGACAGAGGCTAGATGCAAGCCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR GCA 90 bp CCAGTAAGTCATGAGCTCACGATTAGGAGCCTTGAGCACGGTGACTGCACCGGCCTGGGGACTCACCACTaGAGCTCTCCTCCACGCCGT +
Preference number: 4 (lower is better)
Translates to: PVSHELTIRSLEHGDCTGLGTHH*SSPPRR
Trigger: ACGGCGTGGAGGAGAGCTGCAGTGGTGAGTCCCCAG...GCCGGTGCAGTCACCGTGCTCAAGGCTCCTAATCGTGAGCTCATGACTTACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000144348.8
3UTR CAA 72 bp CCGGCACTTCCAAGGGGGTGGGGCATCTCCCTGCATTaGGTCTCAGGGAGGCTCTGGAATAGCAGTAAGACC +
Preference number: 4 (lower is better)
Translates to: PALPRGWGISLH*VSGRLWNSSKT
Trigger: GGTCTTACTGCTATTCCAGAGCCTCCCTGAGACCAAATGCAGGGAGATGCCCCACCCCCTTGGAAGTGCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR TCA 90 bp GGAAACAGTCACCCGGTGAGTCACCAATCAGGCAGCAAGCATATGATGCATGTGCGCGGCCCTGGTAGCTaGAGCAGGCGTCGGCGATGT +
Preference number: 4 (lower is better)
Translates to: GNSHPVSHQSGSKHMMHVRGPGS*SRRRRC
Trigger: ACATCGCCGACGCCTGCTTCAGCTACCAGGGCCGCG...CACATGCATCATATGCTTGCTGCCTGATTGGTGACTCACCGGGTGACTGTTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR GCA 90 bp ATCCTCACTGGTCCACACAGGGTCAGAGAACAGAACCCCACAGCAGAGCCTATGCTCCCTCACCACCACTaGAGCTCTCCTCCACGCCGT +
Preference number: 4 (lower is better)
Translates to: ILTGPHRVREQNPTAEPMLPHHH*SSPPRR
Trigger: ACGGCGTGGAGGAGAGCTGCAGTGGTGGTGAGGGAG...CATAGGCTCTGCTGTGGGGTTCTGTTCTCTGACCCTGTGTGGACCAGTGAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
CDS-3UTR GCA 90 bp TTTCCTGACCAGCCACCCACCCAGAGGTCGCTGCATCAGGACACCCACTGTACTCTGCGACTCTCACTGTaGCCTCTCCCAGGACGGAAT +
Preference number: 4 (lower is better)
Translates to: FPDQPPTQRSLHQDTHCTLRLSL*PLPGRN
Trigger: ATTCCGTCCTGGGAGAGGGCACAGTGAGAGTCGCAG...AGTACAGTGGGTGTCCTGATGCAGCGACCTCTGGGTGGGTGGCTGGTCAGGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR GCA 90 bp AGGCTACATAGGAGAGCAAAGGCTAGTCCAGAAGGGACTGCGGCTGGCAGTGCCGATGACCGGACTGTCTaGTGGAGCAGCCGAATGAGC +
Preference number: 4 (lower is better)
Translates to: RLHRRAKASPEGTAAGSADDRTV*WSSRMS
Trigger: GCTCATTCGGCTGCTCCAGCAGACAGTCCGGTCATC...GGCACTGCCAGCCGCAGTCCCTTCTGGACTAGCCTTTGCTCTCCTATGTAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CCA 90 bp GGCACGTGCATTTGGACCCACACGCTGGAGGCTGTGCTTTGGCTTTCTCAGCCCACCTCGTCCTTGGCCTaGATGGTCTCCATCAGCATG +
Preference number: 4 (lower is better)
Translates to: GTCIWTHTLEAVLWLSQPTSSLA*MVSISM
Trigger: CATGCTGATGGAGACCATCCAGGCCAAGGACGAGGT...GGGCTGAGAAAGCCAAAGCACAGCCTCCAGCGTGTGGGTCCAAATGCACGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR TCA 90 bp CCGGTGAGTCACCAATCAGGCAGCAAGCATATGATGCATGTGACACGGAAATGGTCTCCAGCTGGCCGCTaGGGCCCAGGATCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: PVSHQSGSKHMMHVTRKWSPAGR*GPGSAR
Trigger: ACGAGCAGATCCTGGGCCTCAGCGGCCAGCTGGAGA...CCATTTCCGTGTCACATGCATCATATGCTTGCTGCCTGATTGGTGACTCACCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR TCA 90 bp GGCACGTGCATTTGGACCCACACGCTGGAGGCTGTGCTTTGGCTTTCTCAGCCCAGGGCCCTGTTCCTCTaGGCAAACTGGTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: GTCIWTHTLEAVLWLSQPRALFL*ANWCLH
Trigger: ATGAAGACACCAGTTTGCTCAGAGGAACAGGGCCCT...GGGCTGAGAAAGCCAAAGCACAGCCTCCAGCGTGTGGGTCCAAATGCACGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR TCA 90 bp GGCACGTGCATTTGGACCCACACGCTGGAGGCTGTGCTTTGGCTTTCTCAGCCCCCTCCTGGTTGTCTGTaGGGTACAGAGTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: GTCIWTHTLEAVLWLSQPPPGCL*GTESSG
Trigger: ACCTGAAGACTCTGTACCTCACAGACAACCAGGAGG...GGGCTGAGAAAGCCAAAGCACAGCCTCCAGCGTGTGGGTCCAAATGCACGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR GCA 90 bp ATGGGTCATGGAAAAAGCGCTTCTCGAAACTGTCTTGCTCCGCTCCTGAGTCTGCGCGCAACGGGCCCTTaGCCGACAGCTTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: MGHGKSASRNCLAPLLSLRATGP*PTASAG
Trigger: ACCTGCAGAAGCTGTCGGGCAAGGGCCCGTTGCGCG...CAGACTCAGGAGCGGAGCAAGACAGTTTCGAGAAGCGCTTTTTCCATGACCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR GCA 90 bp CATGTGATGAGACTTGGCCTGGCACCAGAAACAGCGCAGGCATACTGTTTACAGCGCGCAACGGGCCCTTaGCCGACAGCTTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: HVMRLGLAPETAQAYCLQRATGP*PTASAG
Trigger: ACCTGCAGAAGCTGTCGGGCAAGGGCCCGTTGCGCG...CTGTAAACAGTATGCCTGCGCTGTTTCTGGTGCCAGGCCAAGTCTCATCACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
CDS-3UTR GCA 90 bp AAACAAACAAACAAACAGGCAGGTGTGCTCCTGCACACCCCTTGTGTGTGTCCTGTGTGTGGGCGGATCTaGTCCGGGCTCCGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: KQTNKQAGVLLHTPCVCPVCGRI*SGLRSL
Trigger: GAGGCTGCGGAGCCCGGAGCAGATCCGCCCACACAC...AGGACACACACAAGGGGTGTGCAGGAGCACACCTGCCTGTTTGTTTGTTTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
CDS-3UTR GCA 90 bp TATCCTCACTGGTCCACACAGGGTCAGAGAACAGAACCCCACAGCAGAGCCTATACTGCACCGGCGCTGTaGACCTGGAAGTGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: YPHWSTQGQRTEPHSRAYTAPAL*TWKCVG
Trigger: GCCCACACACTTCCAGGTGCACAGCGCCGGTGCAGT...ATAGGCTCTGCTGTGGGGTTCTGTTCTCTGACCCTGTGTGGACCAGTGAGGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
CDS-3UTR GCA 90 bp GGGGGTGGGGCATCTCCCTGCATTTGGTCTCAGGGAGGCTCTGGAATAGCAGTAAGCGTCCTCACTTCCTaGTGGAGGCTTTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GGGASPCIWSQGGSGIAVSVLTS*WRLSFS
Trigger: GGAGAAGGAAAGCCTCCAGCAGGAAGTGAGGACGCT...TACTGCTATTCCAGAGCCTCCCTGAGACCAAATGCAGGGAGATGCCCCACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR GCA 90 bp TCGGGCTTGCATCTAGCCTCTGTCTTCGAGGACTTTCCTGACCAGCCACCCACCGAGTCGGGGAAGTCCTaGTGTCCCACTTCATCATGT +
Preference number: 4 (lower is better)
Translates to: SGLHLASVFEDFPDQPPTESGKS*CPTSSC
Trigger: ACATGATGAAGTGGGACAGCAGGACTTCCCCGACTC...GGTGGGTGGCTGGTCAGGAAAGTCCTCGAAGACAGAGGCTAGATGCAAGCCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR GCA 90 bp TCTGATCACCCAGGAGGACTGCTGGAGCATGGCTGTCTGACATCGCACTGGTCGGAGTCGGGGAAGTCCTaGTGTCCCACTTCATCATGT +
Preference number: 4 (lower is better)
Translates to: SDHPGGLLEHGCLTSHWSESGKS*CPTSSC
Trigger: ACATGATGAAGTGGGACAGCAGGACTTCCCCGACTC...CGACCAGTGCGATGTCAGACAGCCATGCTCCAGCAGTCCTCCTGGGTGATCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
CDS-3UTR GCA 90 bp TCCAGAAGGGACTGCGGCTGGCAGTGCCAAGCCACCAGCAGAGGGCTCCCACGCATGGACATCGAATCTTaGAATTTCAGGATCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SRRDCGWQCQATSRGLPRMDIES*NFRISS
Trigger: AGAGGAGATCCTGAAATTGCAAGATTCGATGTCCAT...GCGTGGGAGCCCTCTGCTGGTGGCTTGGCACTGCCAGCCGCAGTCCCTTCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CCA 90 bp AGGCTACATAGGAGAGCAAAGGCTAGTCCAGAAGGGACTGCGGCTGGCAGTGCCCTTCTTCCTCTCTTCTaGTACCAGGGACTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: RLHRRAKASPEGTAAGSALLPLF*YQGLLQ
Trigger: CTGGAGGAGTCCCTGGTACCAGAAGAGAGGAAGAAG...GGCACTGCCAGCCGCAGTCCCTTCTGGACTAGCCTTTGCTCTCCTATGTAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR CAA 72 bp CCAGCAGAGGGCTCCCACGCCAGCCTGGGAGGCCAGTaGTGTGCTTGCTTTTTAAAGAGGTCCCTCTTCTTA +
Preference number: 4 (lower is better)
Translates to: PAEGSHASLGGQ*CACFLKRSLFL
Trigger: TAAGAAGAGGGACCTCTTTAAAAAGCAAGCACACAACTGGCCTCCCAGGCTGGCGTGGGAGCCCTCTGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR CAA 72 bp ACCGGAGCCTTGCCTCTGGGACAAGCATCTGCCATTTaGTCCCCAAACTGGAAAGAGGGCAAGCCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: TGALPLGQASAI*SPNWKEGKPSF
Trigger: GAAGGAGGGCTTGCCCTCTTTCCAGTTTGGGGACAAAATGGCAGATGCTTGTCCCAGAGGCAAGGCTCCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR CAA 72 bp GAGGGAATGGGAGAAGATGGCTCAGTCACCGGAGCCTaGCCTCTGGGACAAGCATCTGCCATTTTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: EGMGEDGSVTGA*PLGQASAILSP
Trigger: TGGGGACAAAATGGCAGATGCTTGTCCCAGAGGCAAGGCTCCGGTGACTGAGCCATCTTCTCCCATTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR GCA 90 bp GAGAAACTAATGCCGTCTCTCAGGGAATGGCAGAACAGGACCCCATGCATATTGACTGCACCGGCGCTGTaGACCTGGAAGTGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: EKLMPSLREWQNRTPCILTAPAL*TWKCVG
Trigger: GCCCACACACTTCCAGGTGCACAGCGCCGGTGCAGT...CAATATGCATGGGGTCCTGTTCTGCCATTCCCTGAGAGACGGCATTAGTTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CCA 90 bp ACAAGCCACAGATCTGAGAGTTTCCTATGTTCCCTTATGCAGGGCTGGGTCTACCCGGCGCTGTGCACCTaGAAGTGTGTGGGCGGATCT +
Preference number: 4 (lower is better)
Translates to: TSHRSESFLCSLMQGWVYPALCT*KCVGGS
Trigger: AGATCCGCCCACACACTTCCAGGTGCACAGCGCCGG...GTAGACCCAGCCCTGCATAAGGGAACATAGGAAACTCTCAGATCTGTGGCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CCA 90 bp CCGGTGAGTCACCAATCAGGCAGCAAGCATATGATGCATGTGACACGGAAATGGGACCGGACTGTCTGCTaGAGCAGCCGAATGAGCTCC +
Preference number: 4 (lower is better)
Translates to: PVSHQSGSKHMMHVTRKWDRTVC*SSRMSS
Trigger: GGAGCTCATTCGGCTGCTCCAGCAGACAGTCCGGTC...CCATTTCCGTGTCACATGCATCATATGCTTGCTGCCTGATTGGTGACTCACCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CCA 90 bp ATGGGTCATGGAAAAAGCGCTTCTCGAAACTGTCTTGCTCCGCTCCTGAGTCTGTGCTCCGGCTGCTCTTaGCTCTCGACCTGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: MGHGKSASRNCLAPLLSLCSGCS*LSTCRA
Trigger: TGCTCTGCAGGTCGAGAGCCAAGAGCAGCCGGAGCA...CAGACTCAGGAGCGGAGCAAGACAGTTTCGAGAAGCGCTTTTTCCATGACCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CCA 90 bp GGGGGTGGGGCATCTCCCTGCATTTGGTCTCAGGGAGGCTCTGGAATAGCAGTACCAGTGGAAACCTCCTaGTTGTCTGTGAGGTACAGA +
Preference number: 4 (lower is better)
Translates to: GGGASPCIWSQGGSGIAVPVETS*LSVRYR
Trigger: TCTGTACCTCACAGACAACCAGGAGGTTTCCACTGG...TACTGCTATTCCAGAGCCTCCCTGAGACCAAATGCAGGGAGATGCCCCACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CCA 90 bp TCGGGCTTGCATCTAGCCTCTGTCTTCGAGGACTTTCCTGACCAGCCACCCACCACCCGCTGGTCCACCTaGGATCCTAAAAGAGTCTTT +
Preference number: 4 (lower is better)
Translates to: SGLHLASVFEDFPDQPPTTRWST*DPKRVF
Trigger: AAAGACTCTTTTAGGATCCCAGGTGGACCAGCGGGT...GGTGGGTGGCTGGTCAGGAAAGTCCTCGAAGACAGAGGCTAGATGCAAGCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR GCA 90 bp ATGGGTCATGGAAAAAGCGCTTCTCGAAACTGTCTTGCTCCGCTCCTGAGTCTGAATGCTTGCTCCGGCTaGTCTTGGCTCTCGACCTGC +
Preference number: 4 (lower is better)
Translates to: MGHGKSASRNCLAPLLSLNACSG*SWLSTC
Trigger: GCAGGTCGAGAGCCAAGAGCAGCCGGAGCAAGCATT...CAGACTCAGGAGCGGAGCAAGACAGTTTCGAGAAGCGCTTTTTCCATGACCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR GCA 90 bp GGTAAAGACAGTCTCCGTGATGAGGGAATGGGAGAAGATGGCTCAGTCACCGGAGGCTTAACGAATGCTTaGTCCGGCTGCTCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: GKDSLRDEGMGEDGSVTGGLTNA*SGCSWL
Trigger: GAGCCAAGAGCAGCCGGAGCAAGCATTCGTTAAGCC...TCCGGTGACTGAGCCATCTTCTCCCATTCCCTCATCACGGAGACTGTCTTTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR GCA 90 bp GGTAAAGACAGTCTCCGTGATGAGGGAATGGGAGAAGATGGCTCAGTCACCGGAGGTGCTCGTGGGGAATaGCTGCTCGGATCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: GKDSLRDEGMGEDGSVTGGARGE*LLGSGF
Trigger: AAAACCTGATCCGAGCAGGCATTCCCCACGAGCACC...TCCGGTGACTGAGCCATCTTCTCCCATTCCCTCATCACGGAGACTGTCTTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CCA 90 bp AAGCCACCTGCCCCCTGCCCCGAAATGGGAGATGAGAAAGTGCAGCTTAGCTCTTATCTGTGGTATCTCTaGCCACAAGGCCCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: KPPAPCPEMGDEKVQLSSYLWYL*PQGPWE
Trigger: TTCCCAAGGGCCTTGTGGCCAGAGATACCACAGATA...AGAGCTAAGCTGCACTTTCTCATCTCCCATTTCGGGGCAGGGGGCAGGTGGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CCA 90 bp GGGGGTGGGGCATCTCCCTGCATTTGGTCTCAGGGAGGCTCTGGAATAGCAGTACAGCGAGCACAGTTCTaGCTTTTTCTGCAGAAGGAT +
Preference number: 4 (lower is better)
Translates to: GGGASPCIWSQGGSGIAVQRAQF*LFLQKD
Trigger: ATCCTTCTGCAGAAAAAGCCAGAACTGTGCTCGCTG...TACTGCTATTCCAGAGCCTCCCTGAGACCAAATGCAGGGAGATGCCCCACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CCA 90 bp GGAAACAGTCACCCGGTGAGTCACCAATCAGGCAGCAAGCATATGATGCATGTGCGTCCTTGGCCTGGATaGTCTCCATCAGCATGCCGA +
Preference number: 4 (lower is better)
Translates to: GNSHPVSHQSGSKHMMHVRPWPG*SPSACR
Trigger: TCGGCATGCTGATGGAGACCATCCAGGCCAAGGACG...CACATGCATCATATGCTTGCTGCCTGATTGGTGACTCACCGGGTGACTGTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CCA 90 bp AAGCCACCTGCCCCCTGCCCCGAAATGGGAGATGAGAAAGTGCAGCTTAGCTCTGGTCTGGAAGTAGTCTaGCTCCATGCTGTCCTTGAA +
Preference number: 4 (lower is better)
Translates to: KPPAPCPEMGDEKVQLSSGLEVV*LHAVLE
Trigger: TTCAAGGACAGCATGGAGCCAGACTACTTCCAGACC...AGAGCTAAGCTGCACTTTCTCATCTCCCATTTCGGGGCAGGGGGCAGGTGGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR CAA 72 bp CTGTGGCGCCCTGCACATTCCTCCACAGTGCTGCCCTaGGGTAAAAGAAAGAGCATAGGGAGATGTGGAACA +
Preference number: 4 (lower is better)
Translates to: LWRPAHSSTVLP*GKRKSIGRCGT
Trigger: TGTTCCACATCTCCCTATGCTCTTTCTTTTACCCAAGGGCAGCACTGTGGAGGAATGTGCAGGGCGCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR CAA 72 bp GGACCTGGGTCTGGTTCCCACCTCCCACATGTCAGTTaGCAACCACCAGTAACTCTAGTTCCAGGGAATTGG +
Preference number: 4 (lower is better)
Translates to: GPGSGSHLPHVS*QPPVTLVPGNW
Trigger: CCAATTCCCTGGAACTAGAGTTACTGGTGGTTGCAAACTGACATGTGGGAGGTGGGAACCAGACCCAGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR CAA 72 bp CTGGGGCTGGAGAGATGGATCGGTAGGGAAGAATGCTaGCTAGGCAAGCACGAGCACTTGAGAATCCACCAA +
Preference number: 4 (lower is better)
Translates to: LGLERWIGREEC*LGKHEHLRIHQ
Trigger: TTGGTGGATTCTCAAGTGCTCGTGCTTGCCTAGCAAGCATTCTTCCCTACCGATCCATCTCTCCAGCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
CDS-3UTR TCA 90 bp ATGGGTCATGGAAAAAGCGCTTCTCGAAACTGTCTTGCTCCGCTCCTGAGTCTGGCTCCATGCTGTCCTTaGACTTCCTGGTGTGACGGT +
Preference number: 4 (lower is better)
Translates to: MGHGKSASRNCLAPLLSLAPCCP*TSWCDG
Trigger: ACCGTCACACCAGGAAGTTCAAGGACAGCATGGAGC...CAGACTCAGGAGCGGAGCAAGACAGTTTCGAGAAGCGCTTTTTCCATGACCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR GCA 90 bp GAGAATAAGGCAAAGGATATAGGAGGGGCTCTGATGTTCACATATGGGTGCAGACTTGAGCACGGTGACTaGACCGGCGCTGTGCACCTG +
Preference number: 4 (lower is better)
Translates to: ENKAKDIGGALMFTYGCRLEHGD*TGAVHL
Trigger: CAGGTGCACAGCGCCGGTGCAGTCACCGTGCTCAAG...TCTGCACCCATATGTGAACATCAGAGCCCCTCCTATATCCTTTGCCTTATTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
CDS-3UTR GCA 90 bp AGGCTACATAGGAGAGCAAAGGCTAGTCCAGAAGGGACTGCGGCTGGCAGTGCCAGTTCTGGCTTTTTCTaGAGAAGGATTTGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: RLHRRAKASPEGTAAGSASSGFF*RRIWVL
Trigger: CAGCACCCAAATCCTTCTGCAGAAAAAGCCAGAACT...GGCACTGCCAGCCGCAGTCCCTTCTGGACTAGCCTTTGCTCTCCTATGTAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR GCA 90 bp TCTGATCACCCAGGAGGACTGCTGGAGCATGGCTGTCTGACATCGCACTGGTCGAGTTCTGGCTTTTTCTaGAGAAGGATTTGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SDHPGGLLEHGCLTSHWSSSGFF*RRIWVL
Trigger: CAGCACCCAAATCCTTCTGCAGAAAAAGCCAGAACT...CGACCAGTGCGATGTCAGACAGCCATGCTCCAGCAGTCCTCCTGGGTGATCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
CDS-3UTR GCA 90 bp ACAAGCCACAGATCTGAGAGTTTCCTATGTTCCCTTATGCAGGGCTGGGTCTACAGGCGAGCAGGACACTaGGCAGCTTCTGTATGCCCT +
Preference number: 4 (lower is better)
Translates to: TSHRSESFLCSLMQGWVYRRAGH*AASVCP
Trigger: AGGGCATACAGAAGCTGCGCAGTGTCCTGCTCGCCT...GTAGACCCAGCCCTGCATAAGGGAACATAGGAAACTCTCAGATCTGTGGCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CCA 90 bp GCTCATGAGGACTGTTTGCATTTGCATAAATCCAGGAGGATCACTAGGACTCGTCCGGCGCTGTGCACCTaGAAGTGTGTGGGCGGATCT +
Preference number: 4 (lower is better)
Translates to: AHEDCLHLHKSRRITRTRPALCT*KCVGGS
Trigger: AGATCCGCCCACACACTTCCAGGTGCACAGCGCCGG...ACGAGTCCTAGTGATCCTCCTGGATTTATGCAAATGCAAACAGTCCTCATGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
CDS-3UTR CCA 90 bp ACAAGGATAATCCAGGCAACACAGAGACTAGAACTCACCACTCCAGGTGCTTCCCTGGTCCTTGCTGGCTaGGATGGCCAAAGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: TRIIQATQRLELTTPGASLVLAG*DGQRRA
Trigger: AGCTCTCCTTTGGCCATCCCAGCCAGCAAGGACCAG...GGAAGCACCTGGAGTGGTGAGTTCTAGTCTCTGTGTTGCCTGGATTATCCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CCA 90 bp GCTTCAAGAAAGAAGTGTTCCAAGTCCCCAGAGTCTGCTATTCCAGAGGCCATACCAGCTGGTCCTTGCTaGCTGGGATGGCCAAAGGAG +
Preference number: 4 (lower is better)
Translates to: ASRKKCSKSPESAIPEAIPAGPC*LGWPKE
Trigger: CTCCTTTGGCCATCCCAGCCAGCAAGGACCAGCTGG...TATGGCCTCTGGAATAGCAGACTCTGGGGACTTGGAACACTTCTTTCTTGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR TCA 90 bp GGAAACAGTCACCCGGTGAGTCACCAATCAGGCAGCAAGCATATGATGCATGTGCTTGTCATATTGGGATaGCCGGACTGTCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GNSHPVSHQSGSKHMMHVLVILG*PDCLLE
Trigger: CTCCAGCAGACAGTCCGGTCATCCCAATATGACAAG...CACATGCATCATATGCTTGCTGCCTGATTGGTGACTCACCGGGTGACTGTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR GCA 90 bp CCGGTGAGTCACCAATCAGGCAGCAAGCATATGATGCATGTGACACGGAAATGGTCTTGGCTCTCGACCTaGAGAGCATCCTCCAACAAC +
Preference number: 4 (lower is better)
Translates to: PVSHQSGSKHMMHVTRKWSWLST*RASSNN
Trigger: GTTGTTGGAGGATGCTCTGCAGGTCGAGAGCCAAGA...CCATTTCCGTGTCACATGCATCATATGCTTGCTGCCTGATTGGTGACTCACCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR GCA 90 bp GAGGAGGGTAAAGACAGTCTCCGTGATGAGGGAATGGGAGAAGATGGCTCAGTCATGAGGCTTAACGAATaGTTGCTCCGGCTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: EEGKDSLRDEGMGEDGSVMRLNE*LLRLLL
Trigger: CAAGAGCAGCCGGAGCAAGCATTCGTTAAGCCTCAT...GACTGAGCCATCTTCTCCCATTCCCTCATCACGGAGACTGTCTTTACCCTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR GCA 90 bp ATGGGTCATGGAAAAAGCGCTTCTCGAAACTGTCTTGCTCCGCTCCTGAGTCTGCTCGTGGGGAATGCCTaGTCGGATCAGGTTTTTCAG +
Preference number: 4 (lower is better)
Translates to: MGHGKSASRNCLAPLLSLLVGNA*SDQVFQ
Trigger: CTGAAAAACCTGATCCGAGCAGGCATTCCCCACGAG...CAGACTCAGGAGCGGAGCAAGACAGTTTCGAGAAGCGCTTTTTCCATGACCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CCA 90 bp GGGGGTGGGGCATCTCCCTGCATTTGGTCTCAGGGAGGCTCTGGAATAGCAGTAAAATACTTGTCATATTaGGATGACCGGACTGTCTGC +
Preference number: 4 (lower is better)
Translates to: GGGASPCIWSQGGSGIAVKYLSY*DDRTVC
Trigger: GCAGACAGTCCGGTCATCCCAATATGACAAGTATTT...TACTGCTATTCCAGAGCCTCCCTGAGACCAAATGCAGGGAGATGCCCCACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CCA 90 bp AAGCCACCTGCCCCCTGCCCCGAAATGGGAGATGAGAAAGTGCAGCTTAGCTCTTATTTACTTTCAACCTaGCAGAGCTTGGCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: KPPAPCPEMGDEKVQLSSYLLST*QSLASR
Trigger: CCTGGAAGCCAAGCTCTGCCAGGTTGAAAGTAAATA...AGAGCTAAGCTGCACTTTCTCATCTCCCATTTCGGGGCAGGGGGCAGGTGGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CCA 90 bp GCTTCAAGAAAGAAGTGTTCCAAGTCCCCAGAGTCTGCTATTCCAGAGGCCATAACCACTTCCACACCTTaGAGCGGTGCTCGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: ASRKKCSKSPESAIPEAITTSTP*SGARGE
Trigger: TTCCCCACGAGCACCGCTCCAAGGTGTGGAAGTGGT...TATGGCCTCTGGAATAGCAGACTCTGGGGACTTGGAACACTTCTTTCTTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CCA 90 bp ATGGGTCATGGAAAAAGCGCTTCTCGAAACTGTCTTGCTCCGCTCCTGAGTCTGTCTCTGAACACCCGCTaGTCCACCTGGGATCCTAAA +
Preference number: 4 (lower is better)
Translates to: MGHGKSASRNCLAPLLSLSLNTR*STWDPK
Trigger: TTTAGGATCCCAGGTGGACCAGCGGGTGTTCAGAGA...CAGACTCAGGAGCGGAGCAAGACAGTTTCGAGAAGCGCTTTTTCCATGACCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR TCA 90 bp ACAAGGATAATCCAGGCAACACAGAGACTAGAACTCACCACTCCAGGTGCTTCCTCCTCCTGCTGGCTTTaGATCTGCAGCTGCATTTCG +
Preference number: 4 (lower is better)
Translates to: TRIIQATQRLELTTPGASSSCWL*ICSCIS
Trigger: CGAAATGCAGCTGCAGATTCAAAGCCAGCAGGAGGA...GGAAGCACCTGGAGTGGTGAGTTCTAGTCTCTGTGTTGCCTGGATTATCCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR TCA 90 bp ATGGGTCATGGAAAAAGCGCTTCTCGAAACTGTCTTGCTCCGCTCCTGAGTCTGTTGAACTTCCTGGTGTaGCGGTCAACACACCACTTC +
Preference number: 4 (lower is better)
Translates to: MGHGKSASRNCLAPLLSLLNFLV*RSTHHF
Trigger: GAAGTGGTGTGTTGACCGTCACACCAGGAAGTTCAA...CAGACTCAGGAGCGGAGCAAGACAGTTTCGAGAAGCGCTTTTTCCATGACCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR GCA 90 bp ACAAGCCACAGATCTGAGAGTTTCCTATGTTCCCTTATGCAGGGCTGGGTCTACCAGCTCCGGAGAGCATaGCATCTCCCTGTTCATTGT +
Preference number: 4 (lower is better)
Translates to: TSHRSESFLCSLMQGWVYQLRRA*HLPVHC
Trigger: ACAATGAACAGGGAGATGGCATGCTCTCCGGAGCTG...GTAGACCCAGCCCTGCATAAGGGAACATAGGAAACTCTCAGATCTGTGGCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CCA 90 bp GCTCATGAGGACTGTTTGCATTTGCATAAATCCAGGAGGATCACTAGGACTCGTTGGCCACAAGGCCCTTaGGAAAATCCCCTGGAGTCG +
Preference number: 4 (lower is better)
Translates to: AHEDCLHLHKSRRITRTRWPQGP*ENPLES
Trigger: CGACTCCAGGGGATTTTCCCAAGGGCCTTGTGGCCA...ACGAGTCCTAGTGATCCTCCTGGATTTATGCAAATGCAAACAGTCCTCATGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
CDS-3UTR CCA 90 bp TATCCTCACTGGTCCACACAGGGTCAGAGAACAGAACCCCACAGCAGAGCCTATCAGCGAGCACAGTTCTaGCTTTTTCTGCAGAAGGAT +
Preference number: 4 (lower is better)
Translates to: YPHWSTQGQRTEPHSRAYQRAQF*LFLQKD
Trigger: ATCCTTCTGCAGAAAAAGCCAGAACTGTGCTCGCTG...ATAGGCTCTGCTGTGGGGTTCTGTTCTCTGACCCTGTGTGGACCAGTGAGGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
CDS-3UTR CCA 90 bp GCTTCAAGAAAGAAGTGTTCCAAGTCCCCAGAGTCTGCTATTCCAGAGGCCATACCAGCTCGATCTGCTTaGAGGCCGGGTTCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: ASRKKCSKSPESAIPEAIPARSA*RPGSVS
Trigger: AGAAACAGAACCCGGCCTCCAAGCAGATCGAGCTGG...TATGGCCTCTGGAATAGCAGACTCTGGGGACTTGGAACACTTCTTTCTTGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR TCA 90 bp GAGAAACTAATGCCGTCTCTCAGGGAATGGCAGAACAGGACCCCATGCATATTGCGAATGAGCTCCTTCTaGCTGGATAGGTCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: EKLMPSLREWQNRTPCILRMSSF*LDRSFL
Trigger: CAAGAAGGACCTATCCAGTCAGAAGGAGCTCATTCG...CAATATGCATGGGGTCCTGTTCTGCCATTCCCTGAGAGACGGCATTAGTTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR GCA 90 bp TCGGGCTTGCATCTAGCCTCTGTCTTCGAGGACTTTCCTGACCAGCCACCCACCTCATGTCAAGGCTGTTaGAATATTCCCATCTTTTCT +
Preference number: 4 (lower is better)
Translates to: SGLHLASVFEDFPDQPPTSCQGC*NIPIFS
Trigger: AGAAAAGATGGGAATATTGCAACAGCCTTGACATGA...GGTGGGTGGCTGGTCAGGAAAGTCCTCGAAGACAGAGGCTAGATGCAAGCCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CCA 90 bp AGGCTACATAGGAGAGCAAAGGCTAGTCCAGAAGGGACTGCGGCTGGCAGTGCCACGGAAAATAACCTTTaGTCCCTCATAAAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: RLHRRAKASPEGTAAGSATENNL*SLIKER
Trigger: TCTTTCCTTTATGAGGGACCAAAGGTTATTTTCCGT...GGCACTGCCAGCCGCAGTCCCTTCTGGACTAGCCTTTGCTCTCCTATGTAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR CAA 72 bp TGCTATTCCAGAGGCCATAGTGGCCCCAGATCCCTGTaGAAGACAAGGATAATCCAGGCAACACAGAGACTA +
Preference number: 4 (lower is better)
Translates to: CYSRGHSGPRSL*KTRIIQATQRL
Trigger: TAGTCTCTGTGTTGCCTGGATTATCCTTGTCTTCAACAGGGATCTGGGGCCACTATGGCCTCTGGAATAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR CAA 72 bp TCTCTCAGGGAATGGCAGAACAGGACCCCATGCATATaGGAGATTTTCGTTTCCAATCACTGGGCTGGAACC +
Preference number: 4 (lower is better)
Translates to: SLREWQNRTPCI*EIFVSNHWAGT
Trigger: GGTTCCAGCCCAGTGATTGGAAACGAAAATCTCCAATATGCATGGGGTCCTGTTCTGCCATTCCCTGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR GCA 90 bp TATCCTCACTGGTCCACACAGGGTCAGAGAACAGAACCCCACAGCAGAGCCTATGCAGAAGGATTTGGGTaGTGGGAAATTATATCTGTG +
Preference number: 4 (lower is better)
Translates to: YPHWSTQGQRTEPHSRAYAEGFG*WEIISV
Trigger: CACAGATATAATTTCCCAGCACCCAAATCCTTCTGC...ATAGGCTCTGCTGTGGGGTTCTGTTCTCTGACCCTGTGTGGACCAGTGAGGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR CAA 72 bp CAGTTTGCAACCACCAGTAACTCTAGTTCCAGGGAATaGGATGGCCTTTCTGGCCTCCAAGGGTTCTTACAT +
Preference number: 4 (lower is better)
Translates to: QFATTSNSSSRE*DGLSGLQGFLH
Trigger: ATGTAAGAACCCTTGGAGGCCAGAAAGGCCATCCAATTCCCTGGAACTAGAGTTACTGGTGGTTGCAAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
CDS-3UTR TCA 90 bp CCGGTGAGTCACCAATCAGGCAGCAAGCATATGATGCATGTGACACGGAAATGGATGACATTGAATTTTTaGGCTCATTTCCCCACTGCT +
Preference number: 4 (lower is better)
Translates to: PVSHQSGSKHMMHVTRKWMTLNF*AHFPTA
Trigger: AGCAGTGGGGAAATGAGCTCAAAAATTCAATGTCAT...CCATTTCCGTGTCACATGCATCATATGCTTGCTGCCTGATTGGTGACTCACCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR GCA 90 bp ACAAGCCACAGATCTGAGAGTTTCCTATGTTCCCTTATGCAGGGCTGGGTCTACGCAGAAGGATTTGGGTaGTGGGAAATTATATCTGTG +
Preference number: 4 (lower is better)
Translates to: TSHRSESFLCSLMQGWVYAEGFG*WEIISV
Trigger: CACAGATATAATTTCCCAGCACCCAAATCCTTCTGC...GTAGACCCAGCCCTGCATAAGGGAACATAGGAAACTCTCAGATCTGTGGCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR GCA 90 bp ACAAGCCACAGATCTGAGAGTTTCCTATGTTCCCTTATGCAGGGCTGGGTCTACTCTCCCTGTTCATTGTaGTCGCAAAATAGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: TSHRSESFLCSLMQGWVYSPCSL*SQNSFP
Trigger: GGGAAAACTATTTTGCGAGCACAATGAACAGGGAGA...GTAGACCCAGCCCTGCATAAGGGAACATAGGAAACTCTCAGATCTGTGGCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR TCA 90 bp ACAAGGATAATCCAGGCAACACAGAGACTAGAACTCACCACTCCAGGTGCTTCCAGTAACGCAGATACTTaGATATGGACATCGAATCTT +
Preference number: 4 (lower is better)
Translates to: TRIIQATQRLELTTPGASSNADT*IWTSNL
Trigger: AAGATTCGATGTCCATATTCAAGTATCTGCGTTACT...GGAAGCACCTGGAGTGGTGAGTTCTAGTCTCTGTGTTGCCTGGATTATCCTTGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CCA 90 bp GCTTCAAGAAAGAAGTGTTCCAAGTCCCCAGAGTCTGCTATTCCAGAGGCCATATTCTGCAGAAGGATTTaGGTGCTGGGAAATTATATC +
Preference number: 4 (lower is better)
Translates to: ASRKKCSKSPESAIPEAIFCRRI*VLGNYI
Trigger: GATATAATTTCCCAGCACCCAAATCCTTCTGCAGAA...TATGGCCTCTGGAATAGCAGACTCTGGGGACTTGGAACACTTCTTTCTTGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR CAA 72 bp TACGAGCTGCATACAACACACATGCATTCCTTCTGTTaGCTCTTGTCTGAGGATTTGCCTAGCTATTTCAGG +
Preference number: 4 (lower is better)
Translates to: YELHTTHMHSFC*LLSEDLPSYFR
Trigger: CCTGAAATAGCTAGGCAAATCCTCAGACAAGAGCAAACAGAAGGAATGCATGTGTGTTGTATGCAGCTCGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
CDS-3UTR TCA 90 bp GCTTCAAGAAAGAAGTGTTCCAAGTCCCCAGAGTCTGCTATTCCAGAGGCCATAGTGGCGGTTTTTGTATaGCCCAATTATATCTTTCAA +
Preference number: 4 (lower is better)
Translates to: ASRKKCSKSPESAIPEAIVAVFV*PNYIFQ
Trigger: TTGAAAGATATAATTGGGTCATACAAAAACCGCCAC...TATGGCCTCTGGAATAGCAGACTCTGGGGACTTGGAACACTTCTTTCTTGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CCA 90 bp CTTATGTTGGTAGTCATCGAGGGAACTCAAACCAATCCCACAATGAGACACCAGTTCTGCAGAAGGATTTaGGTGCTGGGAAATTATATC +
Preference number: 4 (lower is better)
Translates to: LMLVVIEGTQTNPTMRHQFCRRI*VLGNYI
Trigger: GATATAATTTCCCAGCACCCAAATCCTTCTGCAGAA...CTGGTGTCTCATTGTGGGATTGGTTTGAGTTCCCTCGATGACTACCAACATAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR CAA 72 bp TTAGCTTGGACTTGGACAAATCTGTGCAGGACTGTCTaGATTACATTGATGTTGGAAGAGCTGTTTGGGTCT +
Preference number: 4 (lower is better)
Translates to: LAWTWTNLCRTV*ITLMLEELFGS
Trigger: AGACCCAAACAGCTCTTCCAACATCAATGTAATCAAGACAGTCCTGCACAGATTTGTCCAAGTCCAAGCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
CDS-3UTR GCA 90 bp GAGAATAAGGCAAAGGATATAGGAGGGGCTCTGATGTTCACATATGGGTGCAGATCATGTCAAGGCTGTTaGAATATTCCCATCTTTTCT +
Preference number: 4 (lower is better)
Translates to: ENKAKDIGGALMFTYGCRSCQGC*NIPIFS
Trigger: AGAAAAGATGGGAATATTGCAACAGCCTTGACATGA...TCTGCACCCATATGTGAACATCAGAGCCCCTCCTATATCCTTTGCCTTATTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR CAA 72 bp TCAAACCACCATCCTAAAGACACAAGGATGACATTTTaGATACCTGAAGATAGGCAAAGGCCATTGGCTAAA +
Preference number: 4 (lower is better)
Translates to: SNHHPKDTRMTF*IPEDRQRPLAK
Trigger: TTTAGCCAATGGCCTTTGCCTATCTTCAGGTATCAAAAATGTCATCCTTGTGTCTTTAGGATGGTGGTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
3UTR CAA 72 bp AAGAATCTGAAAAGATCCAACATAATGCTGCTTATGTaGGTAGTCATCGAGGGAACTCAAACCAATCCCACA +
Preference number: 4 (lower is better)
Translates to: KNLKRSNIMLLM*VVIEGTQTNPT
Trigger: TGTGGGATTGGTTTGAGTTCCCTCGATGACTACCAACATAAGCAGCATTATGTTGGATCTTTTCAGATTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
3UTR CAA 72 bp GCTAACAGAAACAAAACTGTGTGTCCACACAAAAACTaGCACATAGGGTTTGTAGGAACACTAATTGCAACA +
Preference number: 4 (lower is better)
Translates to: ANRNKTVCPHKN*HIGFVGTLIAT
Trigger: TGTTGCAATTAGTGTTCCTACAAACCCTATGTGCAAGTTTTTGTGTGGACACACAGTTTTGTTTCTGTTAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
CDS-3UTR CAA 90 bp TCCAGAAGGGACTGCGGCTGGCAGTGCCAAGCCACCAGCAGAGGGCTCCCACGCCCGCGCAACGGGCCCTaGCCCGACAGCTTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: SRRDCGWQCQATSRGLPRPRNGP*PDSFCR
Trigger: CCTGCAGAAGCTGTCGGGCAAGGGCCCGTTGCGCGG...GCGTGGGAGCCCTCTGCTGGTGGCTTGGCACTGCCAGCCGCAGTCCCTTCTGGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS GCA 90 bp TTCTCCAGGCCGAACCTCTCCAGCTGGCCGCTGAGGCCCAGGATCTaGTCGTCCTTCTGGTGCAGGAGCTCCAGTGTGTCCCCGGGGACC +
Preference number: 5 (lower is better)
Translates to: FSRPNLSSWPLRPRI*SSFWCRSSSVSPGT
Trigger: GGTCCCCGGGGACACACTGGAGCTCCTGCACCAGAAGGACGAGCAGATCCTGGGCCTCAGCGGCCAGCTGGAGAGGTTCGGCCTGGAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS CCA 90 bp CGATTAGGAGCCTTGAGCACGGTGACTGCACCGGCGCTGTGCACCTaGAAGTGTGTGGGCGGATCTGCTCCGGGCTCCGCAGCCTCATCG +
Preference number: 5 (lower is better)
Translates to: RLGALSTVTAPALCT*KCVGGSAPGSAASS
Trigger: CGATGAGGCTGCGGAGCCCGGAGCAGATCCGCCCACACACTTCCAGGTGCACAGCGCCGGTGCAGTCACCGTGCTCAAGGCTCCTAATCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041767.14
ENSMUST00000128874.3
CDS-3UTR CAA 90 bp TCCAGAAGGGACTGCGGCTGGCAGTGCCAAGCCACCAGCAGAGGGCTCCCACGCCTGGCCACAAGGCCCTaGGGAAAATCCCCTGGAGTC +
Preference number: 5 (lower is better)
Translates to: SRRDCGWQCQATSRGLPRLATRP*GKSPGV
Trigger: GACTCCAGGGGATTTTCCCAAGGGCCTTGTGGCCAG...GCGTGGGAGCCCTCTGCTGGTGGCTTGGCACTGCCAGCCGCAGTCCCTTCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS TCA 90 bp GCTGGAGGCTTTCCTTCTCCAGGCCGAACCTCTCCAGCTGGCCGCTaGGGCCCAGGATCTGCTCGTCCTTCTGGTGCAGGAGCTCCAGTG +
Preference number: 5 (lower is better)
Translates to: AGGFPSPGRTSPAGR*GPGSARPSGAGAPV
Trigger: CACTGGAGCTCCTGCACCAGAAGGACGAGCAGATCCTGGGCCTCAGCGGCCAGCTGGAGAGGTTCGGCCTGGAGAAGGAAAGCCTCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS GCA 90 bp CGCTCGTTGAGCTCGCCCACCTTGCTCTTCAGCGTCCTCACTTCCTaGTGGAGGCTTTCCTTCTCCAGGCCGAACCTCTCCAGCTGGCCG +
Preference number: 5 (lower is better)
Translates to: RSLSSPTLLFSVLTS*WRLSFSRPNLSSWP
Trigger: CGGCCAGCTGGAGAGGTTCGGCCTGGAGAAGGAAAGCCTCCAGCAGGAAGTGAGGACGCTGAAGAGCAAGGTGGGCGAGCTCAACGAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS CCA 90 bp ACTTCCTGCTGGAGGCTTTCCTTCTCCAGGCCGAACCTCTCCAGCTaGCCGCTGAGGCCCAGGATCTGCTCGTCCTTCTGGTGCAGGAGC +
Preference number: 5 (lower is better)
Translates to: TSCWRLSFSRPNLSS*PLRPRICSSFWCRS
Trigger: GCTCCTGCACCAGAAGGACGAGCAGATCCTGGGCCTCAGCGGCCAGCTGGAGAGGTTCGGCCTGGAGAAGGAAAGCCTCCAGCAGGAAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS CCA 90 bp CTGCCCTCACAGGCGCTGAGCTTGATGATGACCTCGTCCTTGGCCTaGATGGTCTCCATCAGCATGCCGAGCCGCTCGTTGAGCTCGCCC +
Preference number: 5 (lower is better)
Translates to: LPSQALSLMMTSSLA*MVSISMPSRSLSSP
Trigger: GGGCGAGCTCAACGAGCGGCTCGGCATGCTGATGGAGACCATCCAGGCCAAGGACGAGGTCATCATCAAGCTCAGCGCCTGTGAGGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS TCA 90 bp CGTCCTTGGCCTGGATGGTCTCCATCAGCATGCCGAGCCGCTCGTTaGGCTCGCCCACCTTGCTCTTCAGCGTCCTCACTTCCTGCTGGA +
Preference number: 5 (lower is better)
Translates to: RPWPGWSPSACRAAR*ARPPCSSASSLPAG
Trigger: TCCAGCAGGAAGTGAGGACGCTGAAGAGCAAGGTGGGCGAGCTCAACGAGCGGCTCGGCATGCTGATGGAGACCATCCAGGCCAAGGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS CCA 90 bp TCGTTGAGCTCGCCCACCTTGCTCTTCAGCGTCCTCACTTCCTGCTaGAGGCTTTCCTTCTCCAGGCCGAACCTCTCCAGCTGGCCGCTG +
Preference number: 5 (lower is better)
Translates to: SLSSPTLLFSVLTSC*RLSFSRPNLSSWPL
Trigger: CAGCGGCCAGCTGGAGAGGTTCGGCCTGGAGAAGGAAAGCCTCCAGCAGGAAGTGAGGACGCTGAAGAGCAAGGTGGGCGAGCTCAACGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CAA 90 bp GGGGGTGGGGCATCTCCCTGCATTTGGTCTCAGGGAGGCTCTGGAATAGCAGTAATGCCGAGCCGCTCGTaGAGCTCGCCCACCTTGCTC +
Preference number: 5 (lower is better)
Translates to: GGGASPCIWSQGGSGIAVMPSRS*SSPTLL
Trigger: GAGCAAGGTGGGCGAGCTCAACGAGCGGCTCGGCAT...TACTGCTATTCCAGAGCCTCCCTGAGACCAAATGCAGGGAGATGCCCCACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CAA 90 bp CTTCTAAGACACTCTGATCACCCAGGAGGACTGCTGGAGCATGGCTGTCTGACACCGCGCAACGGGCCCTaGCCCGACAGCTTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: LLRHSDHPGGLLEHGCLTPRNGP*PDSFCR
Trigger: CCTGCAGAAGCTGTCGGGCAAGGGCCCGTTGCGCGG...TGTCAGACAGCCATGCTCCAGCAGTCCTCCTGGGTGATCAGAGTGTCTTAGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
CDS-3UTR CAA 90 bp TCCAGAAGGGACTGCGGCTGGCAGTGCCAAGCCACCAGCAGAGGGCTCCCACGCGGGTTCGTGAAATACTaGTCATATTGGGATGACCGG +
Preference number: 5 (lower is better)
Translates to: SRRDCGWQCQATSRGLPRGFVKY*SYWDDR
Trigger: CCGGTCATCCCAATATGACAAGTATTTCACGAACCC...GCGTGGGAGCCCTCTGCTGGTGGCTTGGCACTGCCAGCCGCAGTCCCTTCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS CCA 90 bp TCCGGCTGCTCTTGGCTCTCGACCTGCAGAGCATCCTCCAACAACTaGGCTATGACATCCCTGGCAGGGCCCTGTTCCTCTGAGCAAACT +
Preference number: 5 (lower is better)
Translates to: SGCSWLSTCRASSNN*AMTSLAGPCSSEQT
Trigger: AGTTTGCTCAGAGGAACAGGGCCCTGCCAGGGATGTCATAGCCCAGTTGTTGGAGGATGCTCTGCAGGTCGAGAGCCAAGAGCAGCCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CAA 90 bp GGCACGTGCATTTGGACCCACACGCTGGAGGCTGTGCTTTGGCTTTCTCAGCCCATGATGACCTCGTCCTaGGCCTGGATGGTCTCCATC +
Preference number: 5 (lower is better)
Translates to: GTCIWTHTLEAVLWLSQPMMTSS*AWMVSI
Trigger: GATGGAGACCATCCAGGCCAAGGACGAGGTCATCAT...GGGCTGAGAAAGCCAAAGCACAGCCTCCAGCGTGTGGGTCCAAATGCACGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CAA 90 bp GGCACGTGCATTTGGACCCACACGCTGGAGGCTGTGCTTTGGCTTTCTCAGCCCTCACAGGCGCTGAGCTaGATGATGACCTCGTCCTTG +
Preference number: 5 (lower is better)
Translates to: GTCIWTHTLEAVLWLSQPSQALS*MMTSSL
Trigger: CAAGGACGAGGTCATCATCAAGCTCAGCGCCTGTGA...GGGCTGAGAAAGCCAAAGCACAGCCTCCAGCGTGTGGGTCCAAATGCACGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CAA 90 bp AGGCTACATAGGAGAGCAAAGGCTAGTCCAGAAGGGACTGCGGCTGGCAGTGCCTCCAGCTCGATCTGCTaGGAGGCCGGGTTCTGTTTC +
Preference number: 5 (lower is better)
Translates to: RLHRRAKASPEGTAAGSASSSIC*EAGFCF
Trigger: GAAACAGAACCCGGCCTCCAAGCAGATCGAGCTGGA...GGCACTGCCAGCCGCAGTCCCTTCTGGACTAGCCTTTGCTCTCCTATGTAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS TCA 90 bp TGGGATGACCGGACTGTCTGCTGGAGCAGCCGAATGAGCTCCTTCTaGCTGGATAGGTCCTTCTTGAGTTGCTCCAGCTCCTCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: WDDRTVCWSSRMSSF*LDRSFLSCSSSSCW
Trigger: CCAGCAGGAGGAGCTGGAGCAACTCAAGAAGGACCTATCCAGTCAGAAGGAGCTCATTCGGCTGCTCCAGCAGACAGTCCGGTCATCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS TCA 90 bp GCTCTTGGCTCTCGACCTGCAGAGCATCCTCCAACAACTGGGCTATaGCATCCCTGGCAGGGCCCTGTTCCTCTGAGCAAACTGGTGTCT +
Preference number: 5 (lower is better)
Translates to: ALGSRPAEHPPTTGL*HPWQGPVPLSKLVS
Trigger: AGACACCAGTTTGCTCAGAGGAACAGGGCCCTGCCAGGGATGTCATAGCCCAGTTGTTGGAGGATGCTCTGCAGGTCGAGAGCCAAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS GCA 90 bp AACACACCACTTCCACACCTTGGAGCGGTGCTCGTGGGGAATGCCTaGTCGGATCAGGTTTTTCAGCTCCGGAGAGCATGCCATCTCCCT +
Preference number: 5 (lower is better)
Translates to: NTPLPHLGAVLVGNA*SDQVFQLRRACHLP
Trigger: AGGGAGATGGCATGCTCTCCGGAGCTGAAAAACCTGATCCGAGCAGGCATTCCCCACGAGCACCGCTCCAAGGTGTGGAAGTGGTGTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS GCA 90 bp GGTCAACACACCACTTCCACACCTTGGAGCGGTGCTCGTGGGGAATaGCTGCTCGGATCAGGTTTTTCAGCTCCGGAGAGCATGCCATCT +
Preference number: 5 (lower is better)
Translates to: GQHTTSTPWSGARGE*LLGSGFSAPESMPS
Trigger: AGATGGCATGCTCTCCGGAGCTGAAAAACCTGATCCGAGCAGGCATTCCCCACGAGCACCGCTCCAAGGTGTGGAAGTGGTGTGTTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CAA 90 bp ACGCTGGAGGCTGTGCTTTGGCTTTCTCAGCCCACGAGGCTCACCAGGCAGGAGCCAGAAGGCATCTTCTaGATCCAGGTAAAGGAGAGC +
Preference number: 5 (lower is better)
Translates to: TLEAVLWLSQPTRLTRQEPEGIF*IQVKES
Trigger: GCTCTCCTTTACCTGGATCAAGAAGATGCCTTCTGG...CTCCTGCCTGGTGAGCCTCGTGGGCTGAGAAAGCCAAAGCACAGCCTCCAGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS CCA 90 bp GGGACCCCCTGGCTGATCTGGGGGTTCGTGAAATACTTGTCATATTaGGATGACCGGACTGTCTGCTGGAGCAGCCGAATGAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: GTPWLIWGFVKYLSY*DDRTVCWSSRMSSF
Trigger: GAAGGAGCTCATTCGGCTGCTCCAGCAGACAGTCCGGTCATCCCAATATGACAAGTATTTCACGAACCCCCAGATCAGCCAGGGGGTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CAA 90 bp ATGGGTCATGGAAAAAGCGCTTCTCGAAACTGTCTTGCTCCGCTCCTGAGTCTGTTGCTCCGGCTGCTCTaGGCTCTCGACCTGCAGAGC +
Preference number: 5 (lower is better)
Translates to: MGHGKSASRNCLAPLLSLLLRLL*ALDLQS
Trigger: GCTCTGCAGGTCGAGAGCCAAGAGCAGCCGGAGCAA...CAGACTCAGGAGCGGAGCAAGACAGTTTCGAGAAGCGCTTTTTCCATGACCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CAA 90 bp ACAAGCCACAGATCTGAGAGTTTCCTATGTTCCCTTATGCAGGGCTGGGTCTACCACCACTTCCACACCTaGGAGCGGTGCTCGTGGGGA +
Preference number: 5 (lower is better)
Translates to: TSHRSESFLCSLMQGWVYHHFHT*ERCSWG
Trigger: TCCCCACGAGCACCGCTCCAAGGTGTGGAAGTGGTG...GTAGACCCAGCCCTGCATAAGGGAACATAGGAAACTCTCAGATCTGTGGCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS GCA 90 bp GGAAACCTCCTGGTTGTCTGTGAGGTACAGAGTCTTCAGGTCCAGTaGTCGGACCTTGGCGACCAACTTCTCTTCCTCATCATCATCAGG +
Preference number: 5 (lower is better)
Translates to: GNLLVVCEVQSLQVQ*SDLGDQLLFLIIIR
Trigger: CCTGATGATGATGAGGAAGAGAAGTTGGTCGCCAAGGTCCGAGCACTGGACCTGAAGACTCTGTACCTCACAGACAACCAGGAGGTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CAA 90 bp ACAAGGATAATCCAGGCAACACAGAGACTAGAACTCACCACTCCAGGTGCTTCCTTGAGCTCGCCCACCTaGCTCTTCAGCGTCCTCACT +
Preference number: 5 (lower is better)
Translates to: TRIIQATQRLELTTPGASLSSPT*LFSVLT
Trigger: AGTGAGGACGCTGAAGAGCAAGGTGGGCGAGCTCAA...GGAAGCACCTGGAGTGGTGAGTTCTAGTCTCTGTGTTGCCTGGATTATCCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CAA 90 bp GCTTCAAGAAAGAAGTGTTCCAAGTCCCCAGAGTCTGCTATTCCAGAGGCCATAAGCTCCAGCTGGTCCTaGCTGGCTGGGATGGCCAAA +
Preference number: 5 (lower is better)
Translates to: ASRKKCSKSPESAIPEAISSSWS*LAGMAK
Trigger: TTTGGCCATCCCAGCCAGCAAGGACCAGCTGGAGCT...TATGGCCTCTGGAATAGCAGACTCTGGGGACTTGGAACACTTCTTTCTTGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS CCA 90 bp GTTCTGTTTCTCCAGAGCCTTCTGCAGCAAGGTCTGGAAGTAGTCTaGCTCCATGCTGTCCTTGAACTTCCTGGTGTGACGGTCAACACA +
Preference number: 5 (lower is better)
Translates to: VLFLQSLLQQGLEVV*LHAVLELPGVTVNT
Trigger: TGTGTTGACCGTCACACCAGGAAGTTCAAGGACAGCATGGAGCCAGACTACTTCCAGACCTTGCTGCAGAAGGCTCTGGAGAAACAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CAA 90 bp TTTCCTGACCAGCCACCCACCCAGAGGTCGCTGCATCAGGACACCCACTGTACTGATGACATTGAATTTTaGAGCTCATTTCCCCACTGC +
Preference number: 5 (lower is better)
Translates to: FPDQPPTQRSLHQDTHCTDDIEF*SSFPHC
Trigger: GCAGTGGGGAAATGAGCTCAAAAATTCAATGTCATC...AGTACAGTGGGTGTCCTGATGCAGCGACCTCTGGGTGGGTGGCTGGTCAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CAA 90 bp TTTCCTGACCAGCCACCCACCCAGAGGTCGCTGCATCAGGACACCCACTGTACTCTGCTGTGGCGGTTTTaGTATGACCCAATTATATCT +
Preference number: 5 (lower is better)
Translates to: FPDQPPTQRSLHQDTHCTLLWRF*YDPIIS
Trigger: AGATATAATTGGGTCATACAAAAACCGCCACAGCAG...AGTACAGTGGGTGTCCTGATGCAGCGACCTCTGGGTGGGTGGCTGGTCAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CAA 90 bp ATGGGTCATGGAAAAAGCGCTTCTCGAAACTGTCTTGCTCCGCTCCTGAGTCTGCTCCTCCTGCTGGCTTaGAATCTGCAGCTGCATTTC +
Preference number: 5 (lower is better)
Translates to: MGHGKSASRNCLAPLLSLLLLLA*NLQLHF
Trigger: GAAATGCAGCTGCAGATTCAAAGCCAGCAGGAGGAG...CAGACTCAGGAGCGGAGCAAGACAGTTTCGAGAAGCGCTTTTTCCATGACCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CAA 90 bp GAGAAACTAATGCCGTCTCTCAGGGAATGGCAGAACAGGACCCCATGCATATTGTCAACCTGGCAGAGCTaGGCTTCCAGGCTAGAGTAC +
Preference number: 5 (lower is better)
Translates to: EKLMPSLREWQNRTPCILSTWQS*ASRLEY
Trigger: GTACTCTAGCCTGGAAGCCAAGCTCTGCCAGGTTGA...CAATATGCATGGGGTCCTGTTCTGCCATTCCCTGAGAGACGGCATTAGTTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CAA 90 bp GAGAAACTAATGCCGTCTCTCAGGGAATGGCAGAACAGGACCCCATGCATATTGAGGCTTAACGAATGCTaGCTCCGGCTGCTCTTGGCT +
Preference number: 5 (lower is better)
Translates to: EKLMPSLREWQNRTPCILRLNEC*LRLLLA
Trigger: AGCCAAGAGCAGCCGGAGCAAGCATTCGTTAAGCCT...CAATATGCATGGGGTCCTGTTCTGCCATTCCCTGAGAGACGGCATTAGTTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS TCA 90 bp GCGCTTTCCTTTGTAAGGGTTCCGTCCAAATTCAAAGGGGAATCCTaGACTAGCGACTCCTTTACTGCCCTCAGGCATCGGCTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: ALSFVRVPSKFKGES*TSDSFTALRHRLLP
Trigger: AGGAAGAAGCCGATGCCTGAGGGCAGTAAAGGAGTCGCTAGTTCAGGATTCCCCTTTGAATTTGGACGGAACCCTTACAAAGGAAAGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CAA 90 bp TCGGGCTTGCATCTAGCCTCTGTCTTCGAGGACTTTCCTGACCAGCCACCCACCATCATGTCAAGGCTGTaGCAATATTCCCATCTTTTC +
Preference number: 5 (lower is better)
Translates to: SGLHLASVFEDFPDQPPTIMSRL*QYSHLF
Trigger: GAAAAGATGGGAATATTGCAACAGCCTTGACATGAT...GGTGGGTGGCTGGTCAGGAAAGTCCTCGAAGACAGAGGCTAGATGCAAGCCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CAA 90 bp GAGAAACTAATGCCGTCTCTCAGGGAATGGCAGAACAGGACCCCATGCATATTGGTGGAAACCTCCTGGTaGTCTGTGAGGTACAGAGTC +
Preference number: 5 (lower is better)
Translates to: EKLMPSLREWQNRTPCILVETSW*SVRYRV
Trigger: GACTCTGTACCTCACAGACAACCAGGAGGTTTCCAC...CAATATGCATGGGGTCCTGTTCTGCCATTCCCTGAGAGACGGCATTAGTTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CAA 90 bp AAGCCACCTGCCCCCTGCCCCGAAATGGGAGATGAGAAAGTGCAGCTTAGCTCTCCATCTCCCTGTTCATaGTGCTCGCAAAATAGTTTT +
Preference number: 5 (lower is better)
Translates to: KPPAPCPEMGDEKVQLSSPSPCS*CSQNSF
Trigger: AAAACTATTTTGCGAGCACAATGAACAGGGAGATGG...AGAGCTAAGCTGCACTTTCTCATCTCCCATTTCGGGGCAGGGGGCAGGTGGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CAA 90 bp AAGCCACCTGCCCCCTGCCCCGAAATGGGAGATGAGAAAGTGCAGCTTAGCTCTTATGGACATCGAATCTaGCAATTTCAGGATCTCCTC +
Preference number: 5 (lower is better)
Translates to: KPPAPCPEMGDEKVQLSSYGHRI*QFQDLL
Trigger: GAGGAGATCCTGAAATTGCAAGATTCGATGTCCATA...AGAGCTAAGCTGCACTTTCTCATCTCCCATTTCGGGGCAGGGGGCAGGTGGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS GCA 90 bp TGCTGCCTGATGATGTCGCCGTTCCCTCGAGCAAAGGATCACTACTaGTGTGGCGGTTTTTGTATGACCCAATTATATCTTTCAAGGGGC +
Preference number: 5 (lower is better)
Translates to: CCLMMSPFPRAKDHY*CGGFCMTQLYLSRG
Trigger: GCCCCTTGAAAGATATAATTGGGTCATACAAAAACCGCCACAGCAGTAGTGATCCTTTGCTCGAGGGAACGGCGACATCATCAGGCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS TCA 90 bp CTCCAACAACTGGGCTATGACATCCCTGGCAGGGCCCTGTTCCTCTaGGCAAACTGGTGTCTTCATTTCTTGGAGCAGTATCAAGTATTT +
Preference number: 5 (lower is better)
Translates to: LQQLGYDIPGRALFL*ANWCLHFLEQYQVF
Trigger: AAATACTTGATACTGCTCCAAGAAATGAAGACACCAGTTTGCTCAGAGGAACAGGGCCCTGCCAGGGATGTCATAGCCCAGTTGTTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS CCA 90 bp CCTGATGATGTCGCCGTTCCCTCGAGCAAAGGATCACTACTGCTGTaGCGGTTTTTGTATGACCCAATTATATCTTTCAAGGGGCGCTTT +
Preference number: 5 (lower is better)
Translates to: PDDVAVPSSKGSLLL*RFLYDPIISFKGRF
Trigger: AAAGCGCCCCTTGAAAGATATAATTGGGTCATACAAAAACCGCCACAGCAGTAGTGATCCTTTGCTCGAGGGAACGGCGACATCATCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CAA 90 bp TATCCTCACTGGTCCACACAGGGTCAGAGAACAGAACCCCACAGCAGAGCCTATTTTCTGCAGAAGGATTaGGGTGCTGGGAAATTATAT +
Preference number: 5 (lower is better)
Translates to: YPHWSTQGQRTEPHSRAYFLQKD*GAGKLY
Trigger: ATATAATTTCCCAGCACCCAAATCCTTCTGCAGAAA...ATAGGCTCTGCTGTGGGGTTCTGTTCTCTGACCCTGTGTGGACCAGTGAGGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
CDS TCA 90 bp CGTTCCCTCGAGCAAAGGATCACTACTGCTGTGGCGGTTTTTGTATaGCCCAATTATATCTTTCAAGGGGCGCTTTCCTTTGTAAGGGTT +
Preference number: 5 (lower is better)
Translates to: RSLEQRITTAVAVFV*PNYIFQGALSFVRV
Trigger: AACCCTTACAAAGGAAAGCGCCCCTTGAAAGATATAATTGGGTCATACAAAAACCGCCACAGCAGTAGTGATCCTTTGCTCGAGGGAACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CAA 90 bp CAAACAAACAAACAAACAGGCAGGTGTGCTCCTGCACACCCCTTGTGTGTGTCCATCATGTCAAGGCTGTaGCAATATTCCCATCTTTTC +
Preference number: 5 (lower is better)
Translates to: QTNKQTGRCAPAHPLCVSIMSRL*QYSHLF
Trigger: GAAAAGATGGGAATATTGCAACAGCCTTGACATGAT...GGACACACACAAGGGGTGTGCAGGAGCACACCTGCCTGTTTGTTTGTTTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000128874.3
CDS-3UTR CAA 90 bp GGTAAAGACAGTCTCCGTGATGAGGGAATGGGAGAAGATGGCTCAGTCACCGGATGGTGTCTTCATTTCTaGGAGCAGTATCAAGTATTT +
Preference number: 5 (lower is better)
Translates to: GKDSLRDEGMGEDGSVTGWCLHF*EQYQVF
Trigger: AAATACTTGATACTGCTCCAAGAAATGAAGACACCA...TCCGGTGACTGAGCCATCTTCTCCCATTCCCTCATCACGGAGACTGTCTTTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CAA 90 bp ACAAGGATAATCCAGGCAACACAGAGACTAGAACTCACCACTCCAGGTGCTTCCTTTCTGCAGAAGGATTaGGGTGCTGGGAAATTATAT +
Preference number: 5 (lower is better)
Translates to: TRIIQATQRLELTTPGASFLQKD*GAGKLY
Trigger: ATATAATTTCCCAGCACCCAAATCCTTCTGCAGAAA...GGAAGCACCTGGAGTGGTGAGTTCTAGTCTCTGTGTTGCCTGGATTATCCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS-3UTR CAA 90 bp GCTTCAAGAAAGAAGTGTTCCAAGTCCCCAGAGTCTGCTATTCCAGAGGCCATAATCCTAAAAGAGTCTTaGTGTAATAGTCTCGGGGCA +
Preference number: 5 (lower is better)
Translates to: ASRKKCSKSPESAIPEAIILKES*CNSLGA
Trigger: TGCCCCGAGACTATTACACAAAGACTCTTTTAGGAT...TATGGCCTCTGGAATAGCAGACTCTGGGGACTTGGAACACTTCTTTCTTGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS GCA 72 bp CGAACCAGCGGCTGCGGTAGCCGCGCAACGGGCCCTTaGCCGACAGCTTCTGCAGGTAGCCGCACAGCCGCG +
Preference number: 6 (lower is better)
Translates to: RTSGCGSRATGP*PTASAGSRTAA
Trigger: CGCGGCTGTGCGGCTACCTGCAGAAGCTGTCGGGCAAGGGCCCGTTGCGCGGCTACCGCAGCCGCTGGTTCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041767.14
ENSMUST00000128874.3
CDS GCA 72 bp ACCGGCGCTGTGCACCTGGAAGTGTGTGGGCGGATCTaGTCCGGGCTCCGCAGCCTCATCGCGGCCCTGGTA +
Preference number: 6 (lower is better)
Translates to: TGAVHLEVCGRI*SGLRSLIAALV
Trigger: TACCAGGGCCGCGATGAGGCTGCGGAGCCCGGAGCAGATCCGCCCACACACTTCCAGGTGCACAGCGCCGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041767.14
ENSMUST00000128874.3
CDS CCA 72 bp AGCTGGCCGCTGAGGCCCAGGATCTGCTCGTCCTTCTaGTGCAGGAGCTCCAGTGTGTCCCCGGGGACCCCC +
Preference number: 6 (lower is better)
Translates to: SWPLRPRICSSF*CRSSSVSPGTP
Trigger: GGGGGTCCCCGGGGACACACTGGAGCTCCTGCACCAGAAGGACGAGCAGATCCTGGGCCTCAGCGGCCAGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS CCA 72 bp TCGGCGATGTCCAGGTGGCCGAGCGGCAGAGCGTCCTaGGGACTCACCACTGCAGCTCTCCTCCACGCCGTC +
Preference number: 6 (lower is better)
Translates to: SAMSRWPSGRAS*GLTTAALLHAV
Trigger: GACGGCGTGGAGGAGAGCTGCAGTGGTGAGTCCCCAGGACGCTCTGCCGCTCGGCCACCTGGACATCGCCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000144348.8
CDS CCA 72 bp GCTGGTCCTTGCTGGCTGGGATGGCCAAAGGAGAGCTaGGCCCCAGGGTGGGTGATGACACGCTGCCCTCAC +
Preference number: 6 (lower is better)
Translates to: AGPCWLGWPKES*APGWVMTRCPH
Trigger: GTGAGGGCAGCGTGTCATCACCCACCCTGGGGCCCAGCTCTCCTTTGGCCATCCCAGCCAGCAAGGACCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS GCA 72 bp CCGAACCTCTCCAGCTGGCCGCTGAGGCCCAGGATCTaGTCGTCCTTCTGGTGCAGGAGCTCCAGTGTGTCC +
Preference number: 6 (lower is better)
Translates to: PNLSSWPLRPRI*SSFWCRSSSVS
Trigger: GGACACACTGGAGCTCCTGCACCAGAAGGACGAGCAGATCCTGGGCCTCAGCGGCCAGCTGGAGAGGTTCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS CAA 90 bp TCGTCCTTGGCCTGGATGGTCTCCATCAGCATGCCGAGCCGCTCGTaGAGCTCGCCCACCTTGCTCTTCAGCGTCCTCACTTCCTGCTGG +
Preference number: 6 (lower is better)
Translates to: SSLAWMVSISMPSRS*SSPTLLFSVLTSCW
Trigger: CCAGCAGGAAGTGAGGACGCTGAAGAGCAAGGTGGGCGAGCTCAACGAGCGGCTCGGCATGCTGATGGAGACCATCCAGGCCAAGGACGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS CAA 90 bp GACACGCTGCCCTCACAGGCGCTGAGCTTGATGATGACCTCGTCCTaGGCCTGGATGGTCTCCATCAGCATGCCGAGCCGCTCGTTGAGC +
Preference number: 6 (lower is better)
Translates to: DTLPSQALSLMMTSS*AWMVSISMPSRSLS
Trigger: GCTCAACGAGCGGCTCGGCATGCTGATGGAGACCATCCAGGCCAAGGACGAGGTCATCATCAAGCTCAGCGCCTGTGAGGGCAGCGTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS TCA 72 bp TTTCCTTCTCCAGGCCGAACCTCTCCAGCTGGCCGCTaGGGCCCAGGATCTGCTCGTCCTTCTGGTGCAGGA +
Preference number: 6 (lower is better)
Translates to: FPSPGRTSPAGR*GPGSARPSGAG
Trigger: TCCTGCACCAGAAGGACGAGCAGATCCTGGGCCTCAGCGGCCAGCTGGAGAGGTTCGGCCTGGAGAAGGAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS CAA 72 bp GCCTGGATGGTCTCCATCAGCATGCCGAGCCGCTCGTaGAGCTCGCCCACCTTGCTCTTCAGCGTCCTCACT +
Preference number: 6 (lower is better)
Translates to: AWMVSISMPSRS*SSPTLLFSVLT
Trigger: AGTGAGGACGCTGAAGAGCAAGGTGGGCGAGCTCAACGAGCGGCTCGGCATGCTGATGGAGACCATCCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS TCA 72 bp CCTGGATGGTCTCCATCAGCATGCCGAGCCGCTCGTTaGGCTCGCCCACCTTGCTCTTCAGCGTCCTCACTT +
Preference number: 6 (lower is better)
Translates to: PGWSPSACRAAR*ARPPCSSASSL
Trigger: AAGTGAGGACGCTGAAGAGCAAGGTGGGCGAGCTCAACGAGCGGCTCGGCATGCTGATGGAGACCATCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS CCA 72 bp CAGGCGCTGAGCTTGATGATGACCTCGTCCTTGGCCTaGATGGTCTCCATCAGCATGCCGAGCCGCTCGTTG +
Preference number: 6 (lower is better)
Translates to: QALSLMMTSSLA*MVSISMPSRSL
Trigger: CAACGAGCGGCTCGGCATGCTGATGGAGACCATCCAGGCCAAGGACGAGGTCATCATCAAGCTCAGCGCCTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS CCA 72 bp CACTGCGCAGCTTCTGTATGCCCTCCGACGTGGGGCTaGAGTAGTGCTTGTTGTTGGGCAGAGTCCGGAGCA +
Preference number: 6 (lower is better)
Translates to: HCAASVCPPTWG*SSACCWAESGA
Trigger: TGCTCCGGACTCTGCCCAACAACAAGCACTACTCCAGCCCCACGTCGGAGGGCATACAGAAGCTGCGCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS CCA 72 bp GCAGGACACTGCGCAGCTTCTGTATGCCCTCCGACGTaGGGCTGGAGTAGTGCTTGTTGTTGGGCAGAGTCC +
Preference number: 6 (lower is better)
Translates to: AGHCAASVCPPT*GWSSACCWAES
Trigger: GGACTCTGCCCAACAACAAGCACTACTCCAGCCCCACGTCGGAGGGCATACAGAAGCTGCGCAGTGTCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS CAA 72 bp ATCAGCATGCCGAGCCGCTCGTTGAGCTCGCCCACCTaGCTCTTCAGCGTCCTCACTTCCTGCTGGAGGCTT +
Preference number: 6 (lower is better)
Translates to: ISMPSRSLSSPT*LFSVLTSCWRL
Trigger: AAGCCTCCAGCAGGAAGTGAGGACGCTGAAGAGCAAGGTGGGCGAGCTCAACGAGCGGCTCGGCATGCTGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS GCA 72 bp CTTCCACACCTTGGAGCGGTGCTCGTGGGGAATGCCTaGTCGGATCAGGTTTTTCAGCTCCGGAGAGCATGC +
Preference number: 6 (lower is better)
Translates to: LPHLGAVLVGNA*SDQVFQLRRAC
Trigger: GCATGCTCTCCGGAGCTGAAAAACCTGATCCGAGCAGGCATTCCCCACGAGCACCGCTCCAAGGTGTGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS GCA 72 bp ACCACTTCCACACCTTGGAGCGGTGCTCGTGGGGAATaGCTGCTCGGATCAGGTTTTTCAGCTCCGGAGAGC +
Preference number: 6 (lower is better)
Translates to: TTSTPWSGARGE*LLGSGFSAPES
Trigger: GCTCTCCGGAGCTGAAAAACCTGATCCGAGCAGGCATTCCCCACGAGCACCGCTCCAAGGTGTGGAAGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS GCA 72 bp AGGAGAAGGCGAGCAGGACACTGCGCAGCTTCTGTATaGCCTCCGACGTGGGGCTGGAGTAGTGCTTGTTGT +
Preference number: 6 (lower is better)
Translates to: RRRRAGHCAASV*PPTWGWSSACC
Trigger: ACAACAAGCACTACTCCAGCCCCACGTCGGAGGGCATACAGAAGCTGCGCAGTGTCCTGCTCGCCTTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS TCA 72 bp CGGACTGTCTGCTGGAGCAGCCGAATGAGCTCCTTCTaGCTGGATAGGTCCTTCTTGAGTTGCTCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: RTVCWSSRMSSF*LDRSFLSCSSS
Trigger: GGAGCTGGAGCAACTCAAGAAGGACCTATCCAGTCAGAAGGAGCTCATTCGGCTGCTCCAGCAGACAGTCCG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS TCA 72 bp TCTCGACCTGCAGAGCATCCTCCAACAACTGGGCTATaGCATCCCTGGCAGGGCCCTGTTCCTCTGAGCAAA +
Preference number: 6 (lower is better)
Translates to: SRPAEHPPTTGL*HPWQGPVPLSK
Trigger: TTTGCTCAGAGGAACAGGGCCCTGCCAGGGATGTCATAGCCCAGTTGTTGGAGGATGCTCTGCAGGTCGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS CCA 72 bp TCAACACACCACTTCCACACCTTGGAGCGGTGCTCGTaGGGAATGCCTGCTCGGATCAGGTTTTTCAGCTCC +
Preference number: 6 (lower is better)
Translates to: STHHFHTLERCS*GMPARIRFFSS
Trigger: GGAGCTGAAAAACCTGATCCGAGCAGGCATTCCCCACGAGCACCGCTCCAAGGTGTGGAAGTGGTGTGTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS CAA 72 bp GGGACCCCCTGGCTGATCTGGGGGTTCGTGAAATACTaGTCATATTGGGATGACCGGACTGTCTGCTGGAGC +
Preference number: 6 (lower is better)
Translates to: GTPWLIWGFVKY*SYWDDRTVCWS
Trigger: GCTCCAGCAGACAGTCCGGTCATCCCAATATGACAAGTATTTCACGAACCCCCAGATCAGCCAGGGGGTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS CAA 90 bp CTCACTGACCAGATGAGGCTTAACGAATGCTTGCTCCGGCTGCTCTaGGCTCTCGACCTGCAGAGCATCCTCCAACAACTGGGCTATGAC +
Preference number: 6 (lower is better)
Translates to: LTDQMRLNECLLRLL*ALDLQSILQQLGYD
Trigger: GTCATAGCCCAGTTGTTGGAGGATGCTCTGCAGGTCGAGAGCCAAGAGCAGCCGGAGCAAGCATTCGTTAAGCCTCATCTGGTCAGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS TCA 72 bp GCAAGGTCTGGAAGTAGTCTGGCTCCATGCTGTCCTTaGACTTCCTGGTGTGACGGTCAACACACCACTTCC +
Preference number: 6 (lower is better)
Translates to: ARSGSSLAPCCP*TSWCDGQHTTS
Trigger: GGAAGTGGTGTGTTGACCGTCACACCAGGAAGTTCAAGGACAGCATGGAGCCAGACTACTTCCAGACCTTGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS GCA 72 bp CTGGTTGTCTGTGAGGTACAGAGTCTTCAGGTCCAGTaGTCGGACCTTGGCGACCAACTTCTCTTCCTCATC +
Preference number: 6 (lower is better)
Translates to: LVVCEVQSLQVQ*SDLGDQLLFLI
Trigger: GATGAGGAAGAGAAGTTGGTCGCCAAGGTCCGAGCACTGGACCTGAAGACTCTGTACCTCACAGACAACCAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS CAA 72 bp ATCAAACTCACTGACCAGATGAGGCTTAACGAATGCTaGCTCCGGCTGCTCTTGGCTCTCGACCTGCAGAGC +
Preference number: 6 (lower is better)
Translates to: IKLTDQMRLNEC*LRLLLALDLQS
Trigger: GCTCTGCAGGTCGAGAGCCAAGAGCAGCCGGAGCAAGCATTCGTTAAGCCTCATCTGGTCAGTGAGTTTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS CAA 90 bp CCCGTAGATATCAAACTCACTGACCAGATGAGGCTTAACGAATGCTaGCTCCGGCTGCTCTTGGCTCTCGACCTGCAGAGCATCCTCCAA +
Preference number: 6 (lower is better)
Translates to: PVDIKLTDQMRLNEC*LRLLLALDLQSILQ
Trigger: TTGGAGGATGCTCTGCAGGTCGAGAGCCAAGAGCAGCCGGAGCAAGCATTCGTTAAGCCTCATCTGGTCAGTGAGTTTGATATCTACGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS CCA 72 bp TGGCTGATCTGGGGGTTCGTGAAATACTTGTCATATTaGGATGACCGGACTGTCTGCTGGAGCAGCCGAATG +
Preference number: 6 (lower is better)
Translates to: WLIWGFVKYLSY*DDRTVCWSSRM
Trigger: CATTCGGCTGCTCCAGCAGACAGTCCGGTCATCCCAATATGACAAGTATTTCACGAACCCCCAGATCAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS GCA 72 bp GCCTGCTCGGATCAGGTTTTTCAGCTCCGGAGAGCATaGCATCTCCCTGTTCATTGTGCTCGCAAAATAGTT +
Preference number: 6 (lower is better)
Translates to: ACSDQVFQLRRA*HLPVHCARKIV
Trigger: AACTATTTTGCGAGCACAATGAACAGGGAGATGGCATGCTCTCCGGAGCTGAAAAACCTGATCCGAGCAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS TCA 72 bp TTTGTAAGGGTTCCGTCCAAATTCAAAGGGGAATCCTaGACTAGCGACTCCTTTACTGCCCTCAGGCATCGG +
Preference number: 6 (lower is better)
Translates to: FVRVPSKFKGES*TSDSFTALRHR
Trigger: CCGATGCCTGAGGGCAGTAAAGGAGTCGCTAGTTCAGGATTCCCCTTTGAATTTGGACGGAACCCTTACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS CCA 72 bp GTCGCCGTTCCCTCGAGCAAAGGATCACTACTGCTGTaGCGGTTTTTGTATGACCCAATTATATCTTTCAAG +
Preference number: 6 (lower is better)
Translates to: VAVPSSKGSLLL*RFLYDPIISFK
Trigger: CTTGAAAGATATAATTGGGTCATACAAAAACCGCCACAGCAGTAGTGATCCTTTGCTCGAGGGAACGGCGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS CAA 72 bp CCCTCGAGCAAAGGATCACTACTGCTGTGGCGGTTTTaGTATGACCCAATTATATCTTTCAAGGGGCGCTTT +
Preference number: 6 (lower is better)
Translates to: PSSKGSLLLWRF*YDPIISFKGRF
Trigger: AAAGCGCCCCTTGAAAGATATAATTGGGTCATACAAAAACCGCCACAGCAGTAGTGATCCTTTGCTCGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS CAA 90 bp ATTTCTTGGAGCAGTATCAAGTATTTACTTTCAACCTGGCAGAGCTaGGCTTCCAGGCTAGAGTACTTAGCCATCAGATCCCTCTCTCTC +
Preference number: 6 (lower is better)
Translates to: ISWSSIKYLLSTWQS*ASRLEYLAIRSLSL
Trigger: GAGAGAGAGGGATCTGATGGCTAAGTACTCTAGCCTGGAAGCCAAGCTCTGCCAGGTTGAAAGTAAATACTTGATACTGCTCCAAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS GCA 72 bp ATGATGTCGCCGTTCCCTCGAGCAAAGGATCACTACTaGTGTGGCGGTTTTTGTATGACCCAATTATATCTT +
Preference number: 6 (lower is better)
Translates to: MMSPFPRAKDHY*CGGFCMTQLYL
Trigger: AAGATATAATTGGGTCATACAAAAACCGCCACAGCAGTAGTGATCCTTTGCTCGAGGGAACGGCGACATCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS CAA 72 bp AGCAGTATCAAGTATTTACTTTCAACCTGGCAGAGCTaGGCTTCCAGGCTAGAGTACTTAGCCATCAGATCC +
Preference number: 6 (lower is better)
Translates to: SSIKYLLSTWQS*ASRLEYLAIRS
Trigger: GGATCTGATGGCTAAGTACTCTAGCCTGGAAGCCAAGCTCTGCCAGGTTGAAAGTAAATACTTGATACTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS TCA 72 bp GAGCAAAGGATCACTACTGCTGTGGCGGTTTTTGTATaGCCCAATTATATCTTTCAAGGGGCGCTTTCCTTT +
Preference number: 6 (lower is better)
Translates to: EQRITTAVAVFV*PNYIFQGALSF
Trigger: AAAGGAAAGCGCCCCTTGAAAGATATAATTGGGTCATACAAAAACCGCCACAGCAGTAGTGATCCTTTGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS CAA 90 bp AGTCCGAGTGAAGTAACGCAGATACTTGAATATGGACATCGAATCTaGCAATTTCAGGATCTCCTCTTCCTTATATTTAAAAAGTGCCAG +
Preference number: 6 (lower is better)
Translates to: SPSEVTQILEYGHRI*QFQDLLFLIFKKCQ
Trigger: CTGGCACTTTTTAAATATAAGGAAGAGGAGATCCTGAAATTGCAAGATTCGATGTCCATATTCAAGTATCTGCGTTACTTCACTCGGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14
CDS CAA 72 bp GAAGTAACGCAGATACTTGAATATGGACATCGAATCTaGCAATTTCAGGATCTCCTCTTCCTTATATTTAAA +
Preference number: 6 (lower is better)
Translates to: EVTQILEYGHRI*QFQDLLFLIFK
Trigger: TTTAAATATAAGGAAGAGGAGATCCTGAAATTGCAAGATTCGATGTCCATATTCAAGTATCTGCGTTACTTC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041767.14