Pregenerated sensors for TBC1D22A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051864Ensembl transcript IDs: ENSMUST00000063414.9, ENSMUST00000229242.2
Found 158 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGCTGCCCACCTCTGCCTGGCACCCGTACGTACAGCAGGGCTCTCTaGGGGACTTCCTCTTGGCTGTCTGGACTGGGGGCTGTAGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: GCPPLPGTRTYSRAL*GTSSWLSGLGAVGR Trigger: CCTCCCTACAGCCCCCAGTCCAGACAGCCAAGAGGAAGTCCCTCAGAGAGCCCTGCTGTACGTACGGGTGCCAGGCAGAGGTGGGCAGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR CCA 90 bp | CCGTACGTACAGCAGGGCTCTCTGAGGGACTTCCTCTTGGCTGTCTaGACTGGGGGCTGTAGGGAGGGCATTTGGCAAGGCAGGGCCAGG | + |
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Preference number: 1 (lower is better) Translates to: PYVQQGSLRDFLLAV*TGGCREGIWQGRAR Trigger: CCTGGCCCTGCCTTGCCAAATGCCCTCCCTACAGCCCCCAGTCCAGACAGCCAAGAGGAAGTCCCTCAGAGAGCCCTGCTGTACGTACGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR GCA 90 bp | TCTTCCCCACAGCCTCTGGGCAGAGTCCTAGTGCCTGGGCAGTGTTaGGCTGCTCCTAAAGAAGGGACAGGTCAGAGTGGGCTGCAGTGG | + |
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Preference number: 1 (lower is better) Translates to: SSPQPLGRVLVPGQC*AAPKEGTGQSGLQW Trigger: CCACTGCAGCCCACTCTGACCTGTCCCTTCTTTAGGAGCAGCGCAACACTGCCCAGGCACTAGGACTCTGCCCAGAGGCTGTGGGGAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR CCA 90 bp | GGGATCCCACATCACAGAGGCCAGGCAGCCTGGTGGGGGCATCTGTaGGATATACATGTGAGAAGCCAGTCTGAGGGCCCTGGAGAAGGC | + |
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Preference number: 1 (lower is better) Translates to: GIPHHRGQAAWWGHL*DIHVRSQSEGPGEG Trigger: GCCTTCTCCAGGGCCCTCAGACTGGCTTCTCACATGTATATCCCACAGATGCCCCCACCAGGCTGCCTGGCCTCTGTGATGTGGGATCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR CCA 90 bp | TGGTGGTCCTTGGGGATCCCACATCACAGAGGCCAGGCAGCCTGGTaGGGGCATCTGTGGGATATACATGTGAGAAGCCAGTCTGAGGGC | + |
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Preference number: 1 (lower is better) Translates to: WWSLGIPHHRGQAAW*GHLWDIHVRSQSEG Trigger: GCCCTCAGACTGGCTTCTCACATGTATATCCCACAGATGCCCCCACCAGGCTGCCTGGCCTCTGTGATGTGGGATCCCCAAGGACCACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR CCA 90 bp | GCCTGGTGGTCCTTGGGGATCCCACATCACAGAGGCCAGGCAGCCTaGTGGGGGCATCTGTGGGATATACATGTGAGAAGCCAGTCTGAG | + |
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Preference number: 1 (lower is better) Translates to: AWWSLGIPHHRGQAA*WGHLWDIHVRSQSE Trigger: CTCAGACTGGCTTCTCACATGTATATCCCACAGATGCCCCCACCAGGCTGCCTGGCCTCTGTGATGTGGGATCCCCAAGGACCACCAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR GCA 90 bp | TGGTGCTTCTCCAGAGCCACAGAGGTAGCTTTCCTTATAACTGGGTaGCTCTCACCCAGGACAGGCACTGGTCTGAGGGAGCATGTCCCT | + |
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Preference number: 1 (lower is better) Translates to: WCFSRATEVAFLITG*LSPRTGTGLREHVP Trigger: AGGGACATGCTCCCTCAGACCAGTGCCTGTCCTGGGTGAGAGGCACCCAGTTATAAGGAAAGCTACCTCTGTGGCTCTGGAGAAGCACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR TCA 90 bp | CCCTCTGCTGATCCAGGACATCGGATTGCCTGCACAGCACTCTGCTaGTGTCACATCCCACCTGACCCAGGATCATCTGAACAGAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: PSADPGHRIACTALC*CHIPPDPGSSEQKQ Trigger: CTGCTTCTGTTCAGATGATCCTGGGTCAGGTGGGATGTGACATCAGCAGAGTGCTGTGCAGGCAATCCGATGTCCTGGATCAGCAGAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR CCA 90 bp | AAGATGGTGCTTCTCCAGAGCCACAGAGGTAGCTTTCCTTATAACTaGGTGCCTCTCACCCAGGACAGGCACTGGTCTGAGGGAGCATGT | + |
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Preference number: 1 (lower is better) Translates to: KMVLLQSHRGSFPYN*VPLTQDRHWSEGAC Trigger: ACATGCTCCCTCAGACCAGTGCCTGTCCTGGGTGAGAGGCACCCAGTTATAAGGAAAGCTACCTCTGTGGCTCTGGAGAAGCACCATCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR TCA 90 bp | CCTAAGTCATGCTCGGCATTGTTTTCTGGACTTTATTCTTTCACTTaGCAGAATAGATTTGTGCAATTGAGAGCAGGCTTGAGATGGCTG | + |
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Preference number: 1 (lower is better) Translates to: PKSCSALFSGLYSFT*QNRFVQLRAGLRWL Trigger: CAGCCATCTCAAGCCTGCTCTCAATTGCACAAATCTATTCTGTCAAGTGAAAGAATAAAGTCCAGAAAACAATGCCGAGCATGACTTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR-3UTR GCA 90 bp | CCAGTGGCTCTGGAAAGGGCAGTAGGGCATGAAGAGAGGCCAGCCCAGCAGCTCCTAGGCTGCCTATCCTaGCAGCCCTGGACCATGCTG | + |
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Preference number: 2 (lower is better) Translates to: PVALERAVGHEERPAQQLLGCLS*QPWTML Trigger: CAGCATGGTCCAGGGCTGGCAGGATAGGCAGCCTAG...GAGCTGCTGGGCTGGCCTCTCTTCATGCCCTACTGCCCTTTCCAGAGCCACTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR-3UTR TCA 90 bp | ACAGAAGCAGGCACACGTCTTCCCTATGTCTTCCCCACAGCCTCTGGGCAGAGTATGCTATCCCTAGGGTaGGGCCACTGCCATGGGCCC | + |
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Preference number: 2 (lower is better) Translates to: TEAGTRLPYVFPTASGQSMLSLG*GHCHGP Trigger: GGGCCCATGGCAGTGGCCTCACCCTAGGGATAGCAT...ACTCTGCCCAGAGGCTGTGGGGAAGACATAGGGAAGACGTGTGCCTGCTTCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR-3UTR GCA 90 bp | GGCCCTGGAGAAGGCCAGCAACGGGGCAAAGGCTCTAACCCAGTGGCTCTGGAACTCATCAAACTAGGCTaGCTATCCTGCCAGCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: GPGEGQQRGKGSNPVALELIKLG*LSCQPW Trigger: CCAGGGCTGGCAGGATAGGCAGCCTAGTTTGATGAG...TTCCAGAGCCACTGGGTTAGAGCCTTTGCCCCGTTGCTGGCCTTCTCCAGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR-3UTR CCA 90 bp | ACAGAAGCAGGCACACGTCTTCCCTATGTCTTCCCCACAGCCTCTGGGCAGAGTAGAGGCCAGGCAGCCTaGTGGGGGCATCTGTGGGAT | + |
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Preference number: 2 (lower is better) Translates to: TEAGTRLPYVFPTASGQSRGQAA*WGHLWD Trigger: ATCCCACAGATGCCCCCACCAGGCTGCCTGGCCTCT...ACTCTGCCCAGAGGCTGTGGGGAAGACATAGGGAAGACGTGTGCCTGCTTCTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR-3UTR TCA 90 bp | GCTTTCCTTATAACTGGGTGCCTCTCACCCAGGACAGGCACTGGTCTGAGGGAGCACCTGGGGGTTCCTTaGCCCTTTTCCTCACCCGGA | + |
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Preference number: 2 (lower is better) Translates to: AFLITGCLSPRTGTGLREHLGVP*PFSSPG Trigger: TCCGGGTGAGGAAAAGGGTCAAGGAACCCCCAGGTG...CTCCCTCAGACCAGTGCCTGTCCTGGGTGAGAGGCACCCAGTTATAAGGAAAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR-3UTR GCA 90 bp | GCTTTCCTTATAACTGGGTGCCTCTCACCCAGGACAGGCACTGGTCTGAGGGAGATGGCTGCCCACCTCTaGCTGGCACCCGTACGTACA | + |
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Preference number: 2 (lower is better) Translates to: AFLITGCLSPRTGTGLREMAAHL*LAPVRT Trigger: TGTACGTACGGGTGCCAGGCAGAGGTGGGCAGCCAT...CTCCCTCAGACCAGTGCCTGTCCTGGGTGAGAGGCACCCAGTTATAAGGAAAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR-3UTR CCA 90 bp | GCTTTCCTTATAACTGGGTGCCTCTCACCCAGGACAGGCACTGGTCTGAGGGAGCTATCCTGCCAGCCCTaGACCATGCTGGGTCCACTC | + |
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Preference number: 2 (lower is better) Translates to: AFLITGCLSPRTGTGLRELSCQP*TMLGPL Trigger: GAGTGGACCCAGCATGGTCCAGGGCTGGCAGGATAG...CTCCCTCAGACCAGTGCCTGTCCTGGGTGAGAGGCACCCAGTTATAAGGAAAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR-3UTR CCA 90 bp | CTAGTGCCTGGGCAGTGTTGCGCTGCTCCTAAAGAAGGGACAGGTCAGAGTGGGTGGCCTGGTGGTCCTTaGGGATCCCACATCACAGAG | + |
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Preference number: 2 (lower is better) Translates to: LVPGQCCAAPKEGTGQSGWPGGP*GSHITE Trigger: CTCTGTGATGTGGGATCCCCAAGGACCACCAGGCCA...CCCACTCTGACCTGTCCCTTCTTTAGGAGCAGCGCAACACTGCCCAGGCACTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR CAA 90 bp | ACTGGTCTGAGGGAGCATGTCCCTCTGCTGATCCAGGACATCGGATaGCCTGCACAGCACTCTGCTGATGTCACATCCCACCTGACCCAG | + |
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Preference number: 2 (lower is better) Translates to: TGLREHVPLLIQDIG*PAQHSADVTSHLTQ Trigger: CTGGGTCAGGTGGGATGTGACATCAGCAGAGTGCTGTGCAGGCAATCCGATGTCCTGGATCAGCAGAGGGACATGCTCCCTCAGACCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR-3UTR CCA 90 bp | ACAGAAGCAGGCACACGTCTTCCCTATGTCTTCCCCACAGCCTCTGGGCAGAGTTTCCTCTTGGCTGTCTaGACTGGGGGCTGTAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: TEAGTRLPYVFPTASGQSFLLAV*TGGCRE Trigger: CTCCCTACAGCCCCCAGTCCAGACAGCCAAGAGGAA...ACTCTGCCCAGAGGCTGTGGGGAAGACATAGGGAAGACGTGTGCCTGCTTCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR-3UTR CCA 90 bp | ACAGAAGCAGGCACACGTCTTCCCTATGTCTTCCCCACAGCCTCTGGGCAGAGTCAGAGTGGGCTGCAGTaGGTAACTGAGGACAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: TEAGTRLPYVFPTASGQSQSGLQ*VTEDRR Trigger: CCTCCTGTCCTCAGTTACCCACTGCAGCCCACTCTG...ACTCTGCCCAGAGGCTGTGGGGAAGACATAGGGAAGACGTGTGCCTGCTTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR CAA 90 bp | GGCCACACTGAGCTTCTGAAGCTAGGAGTCTCTCCTGGGCTCTCTTaGGTATCTCATCAAACTAGGCTGCCTATCCTGCCAGCCCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: GHTELLKLGVSPGLS*VSHQTRLPILPALD Trigger: GTCCAGGGCTGGCAGGATAGGCAGCCTAGTTTGATGAGATACCAAAGAGAGCCCAGGAGAGACTCCTAGCTTCAGAAGCTCAGTGTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR-3UTR CCA 90 bp | GTACAGCAGGGCTCTCTGAGGGACTTCCTCTTGGCTGTCTGGACTGGGGGCTGTCTCCTGGGCTCTCTTTaGTATCTCATCAAACTAGGC | + |
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Preference number: 2 (lower is better) Translates to: VQQGSLRDFLLAVWTGGCLLGSL*YLIKLG Trigger: GCCTAGTTTGATGAGATACCAAAGAGAGCCCAGGAG...ACAGCCCCCAGTCCAGACAGCCAAGAGGAAGTCCCTCAGAGAGCCCTGCTGTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR-3UTR GCA 90 bp | CTAGTGCCTGGGCAGTGTTGCGCTGCTCCTAAAGAAGGGACAGGTCAGAGTGGGATTAAAGGCTCTGTGTaGAGAACTCCTAGCTCAGCC | + |
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Preference number: 2 (lower is better) Translates to: LVPGQCCAAPKEGTGQSGIKGSV*RTPSSA Trigger: GGCTGAGCTAGGAGTTCTGCACACAGAGCCTTTAAT...CCCACTCTGACCTGTCCCTTCTTTAGGAGCAGCGCAACACTGCCCAGGCACTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR-3UTR TCA 90 bp | ACATCCCACCTGACCCAGGATCATCTGAACAGAAGCAGGCACACGTCTTCCCTACAATCTCTGGAACCCTaGCTGACAAAAACCCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: TSHLTQDHLNRSRHTSSLQSLEP*LTKTPA Trigger: GGCAGGGGTTTTTGTCAGTCAGGGTTCCAGAGATTG...TAGGGAAGACGTGTGCCTGCTTCTGTTCAGATGATCCTGGGTCAGGTGGGATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR-3UTR CCA 90 bp | CTGACCCAGGATCATCTGAACAGAAGCAGGCACACGTCTTCCCTATGTCTTCCCGCTAGGAGTCTCTCCTaGGCTCTCTTTGGTATCTCA | + |
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Preference number: 2 (lower is better) Translates to: LTQDHLNRSRHTSSLCLPARSLS*ALFGIS Trigger: TGAGATACCAAAGAGAGCCCAGGAGAGACTCCTAGC...GGGAAGACATAGGGAAGACGTGTGCCTGCTTCTGTTCAGATGATCCTGGGTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR-3UTR TCA 90 bp | TCGCCAGCGTCTCGTACACCCAGTCAAGCATTTGCACACATAAAAATACATTCACACTCCTGGCCACACTaGGCTTCTGAAGCTAGGAGT | + |
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Preference number: 2 (lower is better) Translates to: SPASRTPSQAFAHIKIHSHSWPH*ASEARS Trigger: ACTCCTAGCTTCAGAAGCTCAGTGTGGCCAGGAGTG...TGAATGTATTTTTATGTGTGCAAATGCTTGACTGGGTGTACGAGACGCTGGCGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR-3UTR CCA 90 bp | TCGCCAGCGTCTCGTACACCCAGTCAAGCATTTGCACACATAAAAATACATTCAAAACCCCTGCCCACCTaGGGGTTCCTTGACCCTTTT | + |
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Preference number: 2 (lower is better) Translates to: SPASRTPSQAFAHIKIHSKPLPT*GFLDPF Trigger: AAAAGGGTCAAGGAACCCCCAGGTGGGCAGGGGTTT...TGAATGTATTTTTATGTGTGCAAATGCTTGACTGGGTGTACGAGACGCTGGCGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR-3UTR CAA 90 bp | CCAGTGGCTCTGGAAAGGGCAGTAGGGCATGAAGAGAGGCCAGCCCAGCAGCTCTGCCCTGGCCTCCTCTaGTTCCACAGTCTCCCAGGA | + |
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Preference number: 3 (lower is better) Translates to: PVALERAVGHEERPAQQLCPGLL*FHSLPG Trigger: TCCTGGGAGACTGTGGAACAAGAGGAGGCCAGGGCA...GAGCTGCTGGGCTGGCCTCTCTTCATGCCCTACTGCCCTTTCCAGAGCCACTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR CCA 72 bp | CAGCAGGGCTCTCTGAGGGACTTCCTCTTGGCTGTCTaGACTGGGGGCTGTAGGGAGGGCATTTGGCAAGGC | + |
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Preference number: 3 (lower is better) Translates to: QQGSLRDFLLAV*TGGCREGIWQG Trigger: GCCTTGCCAAATGCCCTCCCTACAGCCCCCAGTCCAGACAGCCAAGAGGAAGTCCCTCAGAGAGCCCTGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR CCA 72 bp | TTGAGAGCAGGCTTGAGATGGCTGCCCACCTCTGCCTaGCACCCGTACGTACAGCAGGGCTCTCTGAGGGAC | + |
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Preference number: 3 (lower is better) Translates to: LRAGLRWLPTSA*HPYVQQGSLRD Trigger: GTCCCTCAGAGAGCCCTGCTGTACGTACGGGTGCCAGGCAGAGGTGGGCAGCCATCTCAAGCCTGCTCTCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR TCA 72 bp | AGGCAGCCTGGTGGGGGCATCTGTGGGATATACATGTaGGAAGCCAGTCTGAGGGCCCTGGAGAAGGCCAGC | + |
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Preference number: 3 (lower is better) Translates to: RQPGGGICGIYM*EASLRALEKAS Trigger: GCTGGCCTTCTCCAGGGCCCTCAGACTGGCTTCTCACATGTATATCCCACAGATGCCCCCACCAGGCTGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR GCA 72 bp | GCAATTGAGAGCAGGCTTGAGATGGCTGCCCACCTCTaGCTGGCACCCGTACGTACAGCAGGGCTCTCTGAG | + |
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Preference number: 3 (lower is better) Translates to: AIESRLEMAAHL*LAPVRTAGLSE Trigger: CTCAGAGAGCCCTGCTGTACGTACGGGTGCCAGGCAGAGGTGGGCAGCCATCTCAAGCCTGCTCTCAATTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR GCA 72 bp | CAGCCTCTGGGCAGAGTCCTAGTGCCTGGGCAGTGTTaGGCTGCTCCTAAAGAAGGGACAGGTCAGAGTGGG | + |
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Preference number: 3 (lower is better) Translates to: QPLGRVLVPGQC*AAPKEGTGQSG Trigger: CCCACTCTGACCTGTCCCTTCTTTAGGAGCAGCGCAACACTGCCCAGGCACTAGGACTCTGCCCAGAGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR CCA 72 bp | TCTAGGCTCTTGTCCTACAGGTGGCCTGGTGGTCCTTaGGGATCCCACATCACAGAGGCCAGGCAGCCTGGT | + |
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Preference number: 3 (lower is better) Translates to: SRLLSYRWPGGP*GSHITEARQPG Trigger: ACCAGGCTGCCTGGCCTCTGTGATGTGGGATCCCCAAGGACCACCAGGCCACCTGTAGGACAAGAGCCTAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR TCA 72 bp | CCATGGGGCAGATCGTTATGGGCCTACCCTTCTGGCTaGGGGGTGATCCGCACCATGGAAGGATCAGGGAAG | + |
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Preference number: 3 (lower is better) Translates to: PWGRSLWAYPSG*GVIRTMEGSGK Trigger: CTTCCCTGATCCTTCCATGGTGCGGATCACCCCTCAGCCAGAAGGGTAGGCCCATAACGATCTGCCCCATGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR CCA 72 bp | GAGAGGCCAGCCCAGCAGCTCCTGGCTATTGCCATCTaGGTGGTGTTAGGAAGAAGCCCCCTACACATGGCT | + |
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Preference number: 3 (lower is better) Translates to: ERPAQQLLAIAI*VVLGRSPLHMA Trigger: AGCCATGTGTAGGGGGCTTCTTCCTAACACCACCCAGATGGCAATAGCCAGGAGCTGCTGGGCTGGCCTCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR CCA 72 bp | CATCACAGAGGCCAGGCAGCCTGGTGGGGGCATCTGTaGGATATACATGTGAGAAGCCAGTCTGAGGGCCCT | + |
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Preference number: 3 (lower is better) Translates to: HHRGQAAWWGHL*DIHVRSQSEGP Trigger: AGGGCCCTCAGACTGGCTTCTCACATGTATATCCCACAGATGCCCCCACCAGGCTGCCTGGCCTCTGTGATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR TCA 72 bp | GCAGATCGTTATGGGCCTACCCTTCTGGCTGAGGGGTaGTCCGCACCATGGAAGGATCAGGGAAGATGGTGC | + |
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Preference number: 3 (lower is better) Translates to: ADRYGPTLLAEG*SAPWKDQGRWC Trigger: GCACCATCTTCCCTGATCCTTCCATGGTGCGGATCACCCCTCAGCCAGAAGGGTAGGCCCATAACGATCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR CCA 72 bp | TTGGGGATCCCACATCACAGAGGCCAGGCAGCCTGGTaGGGGCATCTGTGGGATATACATGTGAGAAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: LGIPHHRGQAAW*GHLWDIHVRSQ Trigger: CTGGCTTCTCACATGTATATCCCACAGATGCCCCCACCAGGCTGCCTGGCCTCTGTGATGTGGGATCCCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR CCA 72 bp | TCCTTGGGGATCCCACATCACAGAGGCCAGGCAGCCTaGTGGGGGCATCTGTGGGATATACATGTGAGAAGC | + |
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Preference number: 3 (lower is better) Translates to: SLGIPHHRGQAA*WGHLWDIHVRS Trigger: GCTTCTCACATGTATATCCCACAGATGCCCCCACCAGGCTGCCTGGCCTCTGTGATGTGGGATCCCCAAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR CCA 72 bp | CCTTATAACTGGGTGCCTCTCACCCAGGACAGGCACTaGTCTGAGGGAGCATGTCCCTCTGCTGATCCAGGA | + |
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Preference number: 3 (lower is better) Translates to: PYNWVPLTQDRH*SEGACPSADPG Trigger: TCCTGGATCAGCAGAGGGACATGCTCCCTCAGACCAGTGCCTGTCCTGGGTGAGAGGCACCCAGTTATAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR CCA 72 bp | AACACCATGGGGCAGATCGTTATGGGCCTACCCTTCTaGCTGAGGGGTGATCCGCACCATGGAAGGATCAGG | + |
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Preference number: 3 (lower is better) Translates to: NTMGQIVMGLPF*LRGDPHHGRIR Trigger: CCTGATCCTTCCATGGTGCGGATCACCCCTCAGCCAGAAGGGTAGGCCCATAACGATCTGCCCCATGGTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR CCA 72 bp | CACATTCAAAGCACACATCCTGCCCGGCTCAGCTCATaGGCTCAGACACAGGACTGTCGCCAGCGTCTCGTA | + |
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Preference number: 3 (lower is better) Translates to: HIQSTHPARLSS*AQTQDCRQRLV Trigger: TACGAGACGCTGGCGACAGTCCTGTGTCTGAGCCCATGAGCTGAGCCGGGCAGGATGTGTGCTTTGAATGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR GCA 72 bp | CTCCTGGGCTCTCTTTGGTATCTCATCAAACTAGGCTaGCTATCCTGCCAGCCCTGGACCATGCTGGGTCCA | + |
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Preference number: 3 (lower is better) Translates to: LLGSLWYLIKLG*LSCQPWTMLGP Trigger: TGGACCCAGCATGGTCCAGGGCTGGCAGGATAGGCAGCCTAGTTTGATGAGATACCAAAGAGAGCCCAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR GCA 72 bp | TCCAGAGCCACAGAGGTAGCTTTCCTTATAACTGGGTaGCTCTCACCCAGGACAGGCACTGGTCTGAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: SRATEVAFLITG*LSPRTGTGLRE Trigger: CTCCCTCAGACCAGTGCCTGTCCTGGGTGAGAGGCACCCAGTTATAAGGAAAGCTACCTCTGTGGCTCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR CCA 72 bp | CTTCTCCAGAGCCACAGAGGTAGCTTTCCTTATAACTaGGTGCCTCTCACCCAGGACAGGCACTGGTCTGAG | + |
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Preference number: 3 (lower is better) Translates to: LLQSHRGSFPYN*VPLTQDRHWSE Trigger: CTCAGACCAGTGCCTGTCCTGGGTGAGAGGCACCCAGTTATAAGGAAAGCTACCTCTGTGGCTCTGGAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR TCA 72 bp | GATCCAGGACATCGGATTGCCTGCACAGCACTCTGCTaGTGTCACATCCCACCTGACCCAGGATCATCTGAA | + |
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Preference number: 3 (lower is better) Translates to: DPGHRIACTALC*CHIPPDPGSSE Trigger: TTCAGATGATCCTGGGTCAGGTGGGATGTGACATCAGCAGAGTGCTGTGCAGGCAATCCGATGTCCTGGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| 3UTR CCA 72 bp | CAGAATAGATTTGTGCAATTGAGAGCAGGCTTGAGATaGCTGCCCACCTCTGCCTGGCACCCGTACGTACAG | + |
|
Preference number: 3 (lower is better) Translates to: QNRFVQLRAGLR*LPTSAWHPYVQ Trigger: CTGTACGTACGGGTGCCAGGCAGAGGTGGGCAGCCATCTCAAGCCTGCTCTCAATTGCACAAATCTATTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR TCA 90 bp | GTCCTTGGGGATCCCACATCACAGAGGCCAGGCAGCCTGGTGGGGGCATCTGTGGATGTGCTGTCTCCATaGCCACCTCAGAGTTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VLGDPTSQRPGSLVGASVDVLSP*PPQSSG Trigger: GCCTGAACTCTGAGGTGGTCATGGAGACAGCACATC...CACAGATGCCCCCACCAGGCTGCCTGGCCTCTGTGATGTGGGATCCCCAAGGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR TCA 90 bp | GGCCCTGGAGAAGGCCAGCAACGGGGCAAAGGCTCTAACCCAGTGGCTCTGGAACTCTGCCTCTGGCTGTaGTTGCGCAGGACACGATGT | + |
|
Preference number: 4 (lower is better) Translates to: GPGEGQQRGKGSNPVALELCLWL*LRRTRC Trigger: ACATCGTGTCCTGCGCAATCACAGCCAGAGGCAGAG...TTCCAGAGCCACTGGGTTAGAGCCTTTGCCCCGTTGCTGGCCTTCTCCAGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR TCA 90 bp | AGCAGGCTTGAGATGGCTGCCCACCTCTGCCTGGCACCCGTACGTACAGCAGGGATCACCGGTGCTCTCTaGAGGACAAGGAGTGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SRLEMAAHLCLAPVRTAGITGAL*RTRSVA Trigger: AGCCACACTCCTTGTCCTTCAGAGAGCACCGGTGAT...CCCTGCTGTACGTACGGGTGCCAGGCAGAGGTGGGCAGCCATCTCAAGCCTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR GCA 90 bp | GAGGGCACTCCTGGCCACACTGAGCTTCTGAAGCTAGGAGTCTCTCCTGGGCTCTGGGCTCCATACACATaGTGGATGCTGCCCGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: EGTPGHTELLKLGVSPGLWAPYT*WMLPGT Trigger: GGTCCCGGGCAGCATCCAGCATGTGTATGGAGCCCA...GAGCCCAGGAGAGACTCCTAGCTTCAGAAGCTCAGTGTGGCCAGGAGTGCCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR CCA 90 bp | GTCCTTGGGGATCCCACATCACAGAGGCCAGGCAGCCTGGTGGGGGCATCTGTGCACTCAGTGTCACTGTaGCCGAGTGGGGAAGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: VLGDPTSQRPGSLVGASVHSVSL*PSGEET Trigger: AGTCTCTTCCCCACTCGGCCACAGTGACACTGAGTG...CACAGATGCCCCCACCAGGCTGCCTGGCCTCTGTGATGTGGGATCCCCAAGGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR TCA 90 bp | GGCCCTGGAGAAGGCCAGCAACGGGGCAAAGGCTCTAACCCAGTGGCTCTGGAATTCTGTCGTCTTCTGTaGAGGCTGGCTCTGCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GPGEGQQRGKGSNPVALEFCRLL*RLALPL Trigger: CAGAGGCAGAGCCAGCCTTCACAGAAGACGACAGAA...TTCCAGAGCCACTGGGTTAGAGCCTTTGCCCCGTTGCTGGCCTTCTCCAGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR TCA 90 bp | CTAGTGCCTGGGCAGTGTTGCGCTGCTCCTAAAGAAGGGACAGGTCAGAGTGGGGGCTCTGCTATGGGCTaGGGCTCTGGCTCTGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LVPGQCCAAPKEGTGQSGGSAMG*GSGSGS Trigger: AGAACCAGAGCCAGAGCCTCAGCCCATAGCAGAGCC...CCCACTCTGACCTGTCCCTTCTTTAGGAGCAGCGCAACACTGCCCAGGCACTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR TCA 90 bp | GGCCCTGGAGAAGGCCAGCAACGGGGCAAAGGCTCTAACCCAGTGGCTCTGGAAGAGTGTGGCTCTCACTaGCAGACTTCACCAGGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: GPGEGQQRGKGSNPVALEECGSH*QTSPGE Trigger: TTCGCCTGGTGAAGTCTGTCAGTGAGAGCCACACTC...TTCCAGAGCCACTGGGTTAGAGCCTTTGCCCCGTTGCTGGCCTTCTCCAGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR TCA 90 bp | AGGCTGCCTATCCTGCCAGCCCTGGACCATGCTGGGTCCACTCTGCTAGGTCACTCTCTTACTCAGGGCTaGGTCAGCAAGGGCATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RLPILPALDHAGSTLLGHSLTQG*VSKGMW Trigger: CCACATGCCCTTGCTGACTCAGCCCTGAGTAAGAGA...GTGACCTAGCAGAGTGGACCCAGCATGGTCCAGGGCTGGCAGGATAGGCAGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR TCA 90 bp | GGCCCTGGAGAAGGCCAGCAACGGGGCAAAGGCTCTAACCCAGTGGCTCTGGAACAGCAAGCAGCTGTTTaGACTTGTCCAGCCGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GPGEGQQRGKGSNPVALEQQAAV*TCPAER Trigger: CCTCTCGGCTGGACAAGTTCAAACAGCTGCTTGCTG...TTCCAGAGCCACTGGGTTAGAGCCTTTGCCCCGTTGCTGGCCTTCTCCAGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR GCA 90 bp | GCTTTCCTTATAACTGGGTGCCTCTCACCCAGGACAGGCACTGGTCTGAGGGAGCTGCGCTTCCAGAACTaGTTCCTGGCCCCGTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AFLITGCLSPRTGTGLRELRFQN*FLAPSL Trigger: CAGCGACGGGGCCAGGAAGCAGTTCTGGAAGCGCAG...CTCCCTCAGACCAGTGCCTGTCCTGGGTGAGAGGCACCCAGTTATAAGGAAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR GCA 90 bp | GGCCCTGGAGAAGGCCAGCAACGGGGCAAAGGCTCTAACCCAGTGGCTCTGGAAAGAGACTGGGACCGTTaGAGAGGGACTGTATCACCG | + |
|
Preference number: 4 (lower is better) Translates to: GPGEGQQRGKGSNPVALERDWDR*RGTVSP Trigger: CGGTGATACAGTCCCTCTGCAACGGTCCCAGTCTCT...TTCCAGAGCCACTGGGTTAGAGCCTTTGCCCCGTTGCTGGCCTTCTCCAGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR GCA 90 bp | CCAGTGGCTCTGGAAAGGGCAGTAGGGCATGAAGAGAGGCCAGCCCAGCAGCTCGTTGCGAAGCACCTCTaGAGGCACACTGGAGACATC | + |
|
Preference number: 4 (lower is better) Translates to: PVALERAVGHEERPAQQLVAKHL*RHTGDI Trigger: GATGTCTCCAGTGTGCCTGCAGAGGTGCTTCGCAAC...GAGCTGCTGGGCTGGCCTCTCTTCATGCCCTACTGCCCTTTCCAGAGCCACTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR CCA 90 bp | GTCCTTGGGGATCCCACATCACAGAGGCCAGGCAGCCTGGTGGGGGCATCTGTGTATGGGCTGAGGCTCTaGCTCTGGTTCTGTCGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VLGDPTSQRPGSLVGASVYGLRL*LWFCRL Trigger: AAGACGACAGAACCAGAGCCAGAGCCTCAGCCCATA...CACAGATGCCCCCACCAGGCTGCCTGGCCTCTGTGATGTGGGATCCCCAAGGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR CCA 90 bp | GGCCCTGGAGAAGGCCAGCAACGGGGCAAAGGCTCTAACCCAGTGGCTCTGGAATGGACGAACTGGCTTTaGGATTCCGGACCAGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GPGEGQQRGKGSNPVALEWTNWL*DSGPAQ Trigger: CTGAGCTGGTCCGGAATCCCAAAGCCAGTTCGTCCA...TTCCAGAGCCACTGGGTTAGAGCCTTTGCCCCGTTGCTGGCCTTCTCCAGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR GCA 90 bp | CTAGTGCCTGGGCAGTGTTGCGCTGCTCCTAAAGAAGGGACAGGTCAGAGTGGGCAGCGGAAGGCAAACTaGAGGTACCGCACCTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: LVPGQCCAAPKEGTGQSGQRKAN*RYRTSC Trigger: GCATGAGGTGCGGTACCTGCAGTTTGCCTTCCGCTG...CCCACTCTGACCTGTCCCTTCTTTAGGAGCAGCGCAACACTGCCCAGGCACTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR CCA 90 bp | ACAGAAGCAGGCACACGTCTTCCCTATGTCTTCCCCACAGCCTCTGGGCAGAGTGGCGAAGGTCACCACTaGGAGGTACAGGAGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TEAGTRLPYVFPTASGQSGEGHH*EVQEAL Trigger: CAGAGCCTCCTGTACCTCCCAGTGGTGACCTTCGCC...ACTCTGCCCAGAGGCTGTGGGGAAGACATAGGGAAGACGTGTGCCTGCTTCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR CCA 90 bp | GTACAGCAGGGCTCTCTGAGGGACTTCCTCTTGGCTGTCTGGACTGGGGGCTGTCCTCTGCAGGCACACTaGAGACATCGACCTTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VQQGSLRDFLLAVWTGGCPLQAH*RHRPCP Trigger: TGGACAAGGTCGATGTCTCCAGTGTGCCTGCAGAGG...ACAGCCCCCAGTCCAGACAGCCAAGAGGAAGTCCCTCAGAGAGCCCTGCTGTAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR TCA 90 bp | GCTTTCCTTATAACTGGGTGCCTCTCACCCAGGACAGGCACTGGTCTGAGGGAGTCTGTCACCTTGGGCTaGAGAATCAGCGCTTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: AFLITGCLSPRTGTGLRESVTLG*RISASG Trigger: CCCGGAAGCGCTGATTCTTCAGCCCAAGGTGACAGA...CTCCCTCAGACCAGTGCCTGTCCTGGGTGAGAGGCACCCAGTTATAAGGAAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR GCA 90 bp | CTAGTGCCTGGGCAGTGTTGCGCTGCTCCTAAAGAAGGGACAGGTCAGAGTGGGTCCTTCTGTTTCCTCTaGAGCGTGGCTGGTCTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LVPGQCCAAPKEGTGQSGSFCFL*SVAGLR Trigger: CCGAAGACCAGCCACGCTGCAGAGGAAACAGAAGGA...CCCACTCTGACCTGTCCCTTCTTTAGGAGCAGCGCAACACTGCCCAGGCACTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR GCA 90 bp | ACAGAAGCAGGCACACGTCTTCCCTATGTCTTCCCCACAGCCTCTGGGCAGAGTGTGATTGGGGGCGTCTaGGAAGGCAAACTTGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: TEAGTRLPYVFPTASGQSVIGGV*EGKLEA Trigger: CGCCTCAAGTTTGCCTTCGCAGACGCCCCCAATCAC...ACTCTGCCCAGAGGCTGTGGGGAAGACATAGGGAAGACGTGTGCCTGCTTCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR CCA 90 bp | ACAGAAGCAGGCACACGTCTTCCCTATGTCTTCCCCACAGCCTCTGGGCAGAGTCCTGAACGTATCCACTaGCAGGGTGTCGGATTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TEAGTRLPYVFPTASGQSPERIH*QGVGLP Trigger: GGGCAATCCGACACCCTGCCAGTGGATACGTTCAGG...ACTCTGCCCAGAGGCTGTGGGGAAGACATAGGGAAGACGTGTGCCTGCTTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR GCA 90 bp | CCTGGGCTCTCTTTGGTATCTCATCAAACTAGGCTGCCTATCCTGCCAGCCCTGCCGGGACCTTGCTGTTaGTGCGCTTCCAGAACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PGLSLVSHQTRLPILPALPGPCC*CASRTA Trigger: AGCAGTTCTGGAAGCGCAGCAACAGCAAGGTCCCGG...CAGGGCTGGCAGGATAGGCAGCCTAGTTTGATGAGATACCAAAGAGAGCCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR CCA 90 bp | CCAGTGGCTCTGGAAAGGGCAGTAGGGCATGAAGAGAGGCCAGCCCAGCAGCTCCATCCCAAGCATCACTaGTGTTGCTCTCAAACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PVALERAVGHEERPAQQLHPKHH*CCSQTP Trigger: AGGAGTTTGAGAGCAACACCAGTGATGCTTGGGATG...GAGCTGCTGGGCTGGCCTCTCTTCATGCCCTACTGCCCTTTCCAGAGCCACTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR GCA 90 bp | CCTGGGCTCTCTTTGGTATCTCATCAAACTAGGCTGCCTATCCTGCCAGCCCTGCATACACATGCTGGATaGTGCCCGGGACCTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PGLSLVSHQTRLPILPALHTHAG*CPGPCC Trigger: ACAGCAAGGTCCCGGGCAGCATCCAGCATGTGTATG...CAGGGCTGGCAGGATAGGCAGCCTAGTTTGATGAGATACCAAAGAGAGCCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR GCA 90 bp | CCTGGGCTCTCTTTGGTATCTCATCAAACTAGGCTGCCTATCCTGCCAGCCCTGGGATCAAACGGTGGGTaGTGGGCTCCATACACATGC | + |
|
Preference number: 4 (lower is better) Translates to: PGLSLVSHQTRLPILPALGSNGG*WAPYTC Trigger: GCATGTGTATGGAGCCCAGCACCCACCGTTTGATCC...CAGGGCTGGCAGGATAGGCAGCCTAGTTTGATGAGATACCAAAGAGAGCCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR GCA 90 bp | ACAGAAGCAGGCACACGTCTTCCCTATGTCTTCCCCACAGCCTCTGGGCAGAGTTGTCAGCCTCAATGTTaGGAAGCACCTCTGCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TEAGTRLPYVFPTASGQSCQPQC*EAPLQA Trigger: TGCCTGCAGAGGTGCTTCGCAACATTGAGGCTGACA...ACTCTGCCCAGAGGCTGTGGGGAAGACATAGGGAAGACGTGTGCCTGCTTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR CCA 90 bp | ACAGAAGCAGGCACACGTCTTCCCTATGTCTTCCCCACAGCCTCTGGGCAGAGTTTGCTCTCAAACTCCTaGAAGGTGCTGACCCGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TEAGTRLPYVFPTASGQSLLSNS*KVLTRL Trigger: CAAGCGGGTCAGCACCTTCCAGGAGTTTGAGAGCAA...ACTCTGCCCAGAGGCTGTGGGGAAGACATAGGGAAGACGTGTGCCTGCTTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR GCA 90 bp | CCTGGGCTCTCTTTGGTATCTCATCAAACTAGGCTGCCTATCCTGCCAGCCCTGGGACTGTATCACCGGTaGTCTCTGAAGGACAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PGLSLVSHQTRLPILPALGLYHR*SLKDKE Trigger: CTCCTTGTCCTTCAGAGAGCACCGGTGATACAGTCC...CAGGGCTGGCAGGATAGGCAGCCTAGTTTGATGAGATACCAAAGAGAGCCCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR CCA 90 bp | AATAGATTTGTGCAATTGAGAGCAGGCTTGAGATGGCTGCCCACCTCTGCCTGGGCTCCATACACATGCTaGATGCTGCCCGGGACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NRFVQLRAGLRWLPTSAWAPYTC*MLPGTL Trigger: CAAGGTCCCGGGCAGCATCCAGCATGTGTATGGAGC...CCAGGCAGAGGTGGGCAGCCATCTCAAGCCTGCTCTCAATTGCACAAATCTATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR CCA 90 bp | ACATCCCACCTGACCCAGGATCATCTGAACAGAAGCAGGCACACGTCTTCCCTATCAAACGGTGGGTGCTaGGCTCCATACACATGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TSHLTQDHLNRSRHTSSLSNGGC*APYTCW Trigger: CCAGCATGTGTATGGAGCCCAGCACCCACCGTTTGA...TAGGGAAGACGTGTGCCTGCTTCTGTTCAGATGATCCTGGGTCAGGTGGGATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR CCA 90 bp | GCTTTCCTTATAACTGGGTGCCTCTCACCCAGGACAGGCACTGGTCTGAGGGAGGAAGGACAAGGAGTGTaGCTCTCACTGACAGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: AFLITGCLSPRTGTGLREEGQGV*LSLTDF Trigger: GAAGTCTGTCAGTGAGAGCCACACTCCTTGTCCTTC...CTCCCTCAGACCAGTGCCTGTCCTGGGTGAGAGGCACCCAGTTATAAGGAAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR CCA 90 bp | AATAGATTTGTGCAATTGAGAGCAGGCTTGAGATGGCTGCCCACCTCTGCCTGGGAGTGGGGAAGAGACTaGGACCGTTGCAGAGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: NRFVQLRAGLRWLPTSAWEWGRD*DRCRGT Trigger: AGTCCCTCTGCAACGGTCCCAGTCTCTTCCCCACTC...CCAGGCAGAGGTGGGCAGCCATCTCAAGCCTGCTCTCAATTGCACAAATCTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR TCA 90 bp | GCCAGCGTCTCGTACACCCAGTCAAGCATTTGCACACATAAAAATACATTCAGGACTCCTGGAAGGTGCTaGCCCGCTTGGCCTTCACCG | + |
|
Preference number: 4 (lower is better) Translates to: ASVSYTQSSICTHKNTFRTPGRC*PAWPSP Trigger: CGGTGAAGGCCAAGCGGGTCAGCACCTTCCAGGAGT...CCTGAATGTATTTTTATGTGTGCAAATGCTTGACTGGGTGTACGAGACGCTGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR TCA 90 bp | AGCAGGCTTGAGATGGCTGCCCACCTCTGCCTGGCACCCGTACGTACAGCAGGGAAGAGCAGCAACTCTTaGAAATCTCTTTCTTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SRLEMAAHLCLAPVRTAGKSSNS*KSLSSR Trigger: TCTAGAAGAAAGAGATTTTCAAGAGTTGCTGCTCTT...CCCTGCTGTACGTACGGGTGCCAGGCAGAGGTGGGCAGCCATCTCAAGCCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR CCA 90 bp | GGAGTCTCTCCTGGGCTCTCTTTGGTATCTCATCAAACTAGGCTGCCTATCCTGCCTCAAGGTCTGTGTTaGGGCCAGCAAGCAGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GVSPGLSLVSHQTRLPILPQGLC*GQQAAV Trigger: AACAGCTGCTTGCTGGCCCCAACACAGACCTTGAGG...CAGGATAGGCAGCCTAGTTTGATGAGATACCAAAGAGAGCCCAGGAGAGACTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR CCA 90 bp | GCTTTCCTTATAACTGGGTGCCTCTCACCCAGGACAGGCACTGGTCTGAGGGAGGTCTTCGGTCAACATTaGCAGGAAGGTAACCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AFLITGCLSPRTGTGLREVFGQH*QEGNLR Trigger: TCTCAGGTTACCTTCCTGCCAATGTTGACCGAAGAC...CTCCCTCAGACCAGTGCCTGTCCTGGGTGAGAGGCACCCAGTTATAAGGAAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR CCA 90 bp | CCTGGGCTCTCTTTGGTATCTCATCAAACTAGGCTGCCTATCCTGCCAGCCCTGACTTCTTGTAGTGATTaGGGGCGTCTGCGAAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PGLSLVSHQTRLPILPALTSCSD*GRLRRQ Trigger: TTGCCTTCGCAGACGCCCCCAATCACTACAAGAAGT...CAGGGCTGGCAGGATAGGCAGCCTAGTTTGATGAGATACCAAAGAGAGCCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR GCA 90 bp | ACATCCCACCTGACCCAGGATCATCTGAACAGAAGCAGGCACACGTCTTCCCTATGCCATCCAGAAGCTTaGTCATGCACCAGTAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TSHLTQDHLNRSRHTSSLCHPEA*SCTSRC Trigger: ACACCTACTGGTGCATGAGCAAGCTTCTGGATGGCA...TAGGGAAGACGTGTGCCTGCTTCTGTTCAGATGATCCTGGGTCAGGTGGGATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR CCA 90 bp | CTGACCCAGGATCATCTGAACAGAAGCAGGCACACGTCTTCCCTATGTCTTCCCTGTCATTGGACGAACTaGCTTTGGGATTCCGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: LTQDHLNRSRHTSSLCLPCHWTN*LWDSGP Trigger: TGGTCCGGAATCCCAAAGCCAGTTCGTCCAATGACA...GGGAAGACATAGGGAAGACGTGTGCCTGCTTCTGTTCAGATGATCCTGGGTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR CCA 90 bp | AATAGATTTGTGCAATTGAGAGCAGGCTTGAGATGGCTGCCCACCTCTGCCTGGGCAGTAGGCAGGTTCTaGAGGAAGAGCAGCAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: NRFVQLRAGLRWLPTSAWAVGRF*RKSSNS Trigger: AGAGTTGCTGCTCTTCCTCCAGAACCTGCCTACTGC...CCAGGCAGAGGTGGGCAGCCATCTCAAGCCTGCTCTCAATTGCACAAATCTATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR GCA 90 bp | ACATCCCACCTGACCCAGGATCATCTGAACAGAAGCAGGCACACGTCTTCCCTAAAGCATCACTGGTGTTaGTCTCAAACTCCTGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TSHLTQDHLNRSRHTSSLKHHWC*SQTPGR Trigger: CCTTCCAGGAGTTTGAGAGCAACACCAGTGATGCTT...TAGGGAAGACGTGTGCCTGCTTCTGTTCAGATGATCCTGGGTCAGGTGGGATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| 3UTR CAA 72 bp | GAGCTTCTGAAGCTAGGAGTCTCTCCTGGGCTCTCTTaGGTATCTCATCAAACTAGGCTGCCTATCCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ELLKLGVSPGLS*VSHQTRLPILP Trigger: TGGCAGGATAGGCAGCCTAGTTTGATGAGATACCAAAGAGAGCCCAGGAGAGACTCCTAGCTTCAGAAGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR GCA 90 bp | TCGCCAGCGTCTCGTACACCCAGTCAAGCATTTGCACACATAAAAATACATTCAAGGTACAGGAGGCTCTaGTATGGGCTGAGGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SPASRTPSQAFAHIKIHSRYRRL*YGLRLW Trigger: CCAGAGCCTCAGCCCATAGCAGAGCCTCCTGTACCT...TGAATGTATTTTTATGTGTGCAAATGCTTGACTGGGTGTACGAGACGCTGGCGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR TCA 90 bp | TCCTTGTCATCTCATAAAAACACCATGGGGCAGATCGTTATGGGCCTACCCTTCGGCAGGAAGGTAACCTaGGAGAAGTTTCCATGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLSSHKNTMGQIVMGLPFGRKVT*EKFPCH Trigger: ATGACATGGAAACTTCTCTCAGGTTACCTTCCTGCC...GAAGGGTAGGCCCATAACGATCTGCCCCATGGTGTTTTTATGAGATGACAAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR TCA 90 bp | AATAGATTTGTGCAATTGAGAGCAGGCTTGAGATGGCTGCCCACCTCTGCCTGGACATATAAGTGGAAATaGGAAAAGCCCTCGGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NRFVQLRAGLRWLPTSAWTYKWK*EKPSGS Trigger: TGAACCCGAGGGCTTTTCTCATTTCCACTTATATGT...CCAGGCAGAGGTGGGCAGCCATCTCAAGCCTGCTCTCAATTGCACAAATCTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR GCA 90 bp | TCGCCAGCGTCTCGTACACCCAGTCAAGCATTTGCACACATAAAAATACATTCAGGCAGGGTGTCGGATTaGCCATATAAACAAGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SPASRTPSQAFAHIKIHSGRVSD*PYKQDP Trigger: AGGATCTTGTTTATATGGGCAATCCGACACCCTGCC...TGAATGTATTTTTATGTGTGCAAATGCTTGACTGGGTGTACGAGACGCTGGCGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR TCA 90 bp | TCGCCAGCGTCTCGTACACCCAGTCAAGCATTTGCACACATAAAAATACATTCAATCTTCACTTTCATCTaGATCCCAGGTTGGGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SPASRTPSQAFAHIKIHSIFTFI*IPGWAK Trigger: CTTTGCCCAACCTGGGATTCAGATGAAAGTGAAGAT...TGAATGTATTTTTATGTGTGCAAATGCTTGACTGGGTGTACGAGACGCTGGCGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR CCA 90 bp | TCGCCAGCGTCTCGTACACCCAGTCAAGCATTTGCACACATAAAAATACATTCAAAATCTCTGTCACCTTaGGCTGAAGAATCAGCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SPASRTPSQAFAHIKIHSKSLSP*AEESAL Trigger: AAGCGCTGATTCTTCAGCCCAAGGTGACAGAGATTT...TGAATGTATTTTTATGTGTGCAAATGCTTGACTGGGTGTACGAGACGCTGGCGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR CAA 90 bp | AGCAGGCTTGAGATGGCTGCCCACCTCTGCCTGGCACCCGTACGTACAGCAGGGAAGGTGCTGACCCGCTaGGCCTTCACCGGAGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SRLEMAAHLCLAPVRTAGKVLTR*AFTGVV Trigger: CACCACTCCGGTGAAGGCCAAGCGGGTCAGCACCTT...CCCTGCTGTACGTACGGGTGCCAGGCAGAGGTGGGCAGCCATCTCAAGCCTGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR CAA 90 bp | AGGCTGCCTATCCTGCCAGCCCTGGACCATGCTGGGTCCACTCTGCTAGGTCACATGCTGCCCGGGACCTaGCTGTTGCTGCGCTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RLPILPALDHAGSTLLGHMLPGT*LLLRFQ Trigger: CTGGAAGCGCAGCAACAGCAAGGTCCCGGGCAGCAT...GTGACCTAGCAGAGTGGACCCAGCATGGTCCAGGGCTGGCAGGATAGGCAGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS TCA 90 bp | CATCCCAAGCATCACTGGTGTTGCTCTCAAACTCCTGGAAGGTGCTaGCCCGCTTGGCCTTCACCGGAGTGGTGGGCACCTTGGGCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: HPKHHWCCSQTPGRC*PAWPSPEWWAPWAW Trigger: CCACGCCCAAGGTGCCCACCACTCCGGTGAAGGCCAAGCGGGTCAGCACCTTCCAGGAGTTTGAGAGCAACACCAGTGATGCTTGGGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063414.9 ENSMUST00000229242.2 |
||
| CDS CCA 90 bp | TCTTCACCGGCATCCCAAGCATCACTGGTGTTGCTCTCAAACTCCTaGAAGGTGCTGACCCGCTTGGCCTTCACCGGAGTGGTGGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: SSPASQASLVLLSNS*KVLTRLAFTGVVGT Trigger: GGTGCCCACCACTCCGGTGAAGGCCAAGCGGGTCAGCACCTTCCAGGAGTTTGAGAGCAACACCAGTGATGCTTGGGATGCCGGTGAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063414.9 ENSMUST00000229242.2 |
||
| CDS-3UTR CAA 90 bp | GAGGGCACTCCTGGCCACACTGAGCTTCTGAAGCTAGGAGTCTCTCCTGGGCTCTCCTCAAGGTCTGTGTaGGGGCCAGCAAGCAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: EGTPGHTELLKLGVSPGLSSRSV*GPASSC Trigger: ACAGCTGCTTGCTGGCCCCAACACAGACCTTGAGGA...GAGCCCAGGAGAGACTCCTAGCTTCAGAAGCTCAGTGTGGCCAGGAGTGCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS TCA 90 bp | TCTGCCTCTGGCTGTGATTGCGCAGGACACGATGTGCTGTCTCCATaGCCACCTCAGAGTTCAGGCTCTCTGTCGCCATGGCCAGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SASGCDCAGHDVLSP*PPQSSGSLSPWPGA Trigger: AGCTCCTGGCCATGGCGACAGAGAGCCTGAACTCTGAGGTGGTCATGGAGACAGCACATCGTGTCCTGCGCAATCACAGCCAGAGGCAGA 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063414.9 ENSMUST00000229242.2 |
||
| CDS TCA 90 bp | CTCTGCTATGGGCTGAGGCTCTGGCTCTGGTTCTGTCGTCTTCTGTaGAGGCTGGCTCTGCCTCTGGCTGTGATTGCGCAGGACACGATG | + |
|
Preference number: 5 (lower is better) Translates to: LCYGLRLWLWFCRLL*RLALPLAVIAQDTM Trigger: CATCGTGTCCTGCGCAATCACAGCCAGAGGCAGAGCCAGCCTTCACAGAAGACGACAGAACCAGAGCCAGAGCCTCAGCCCATAGCAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063414.9 ENSMUST00000229242.2 |
||
| CDS GCA 90 bp | GTGGACTTGAGCAAGGTGCCATGTAACAGCGGATCAAACGGTGGGTaGTGGGCTCCATACACATGCTGGATGCTGCCCGGGACCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VDLSKVPCNSGSNGG*WAPYTCWMLPGTLL Trigger: CAGCAAGGTCCCGGGCAGCATCCAGCATGTGTATGGAGCCCAGCACCCACCGTTTGATCCGCTGTTACATGGCACCTTGCTCAAGTCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS CCA 90 bp | TCACCAGGCGAAGGTCACCACTGGGAGGTACAGGAGGCTCTGCTATaGGCTGAGGCTCTGGCTCTGGTTCTGTCGTCTTCTGTGAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SPGEGHHWEVQEALL*AEALALVLSSSVKA Trigger: AGCCTTCACAGAAGACGACAGAACCAGAGCCAGAGCCTCAGCCCATAGCAGAGCCTCCTGTACCTCCCAGTGGTGACCTTCGCCTGGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063414.9 ENSMUST00000229242.2 |
||
| CDS TCA 90 bp | TGGGGTCCCAGGCAAGGTCTGTGTTGGGGCCAGCAAGCAGCTGTTTaGACTTGTCCAGCCGAGAGGTCTCTCTCTTACTCAGGGCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: WGPRQGLCWGQQAAV*TCPAERSLSYSGLS Trigger: ACTCAGCCCTGAGTAAGAGAGAGACCTCTCGGCTGGACAAGTTCAAACAGCTGCTTGCTGGCCCCAACACAGACCTTGCCTGGGACCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229242.2 |
||
| CDS CCA 90 bp | GACTTGAGCAAGGTGCCATGTAACAGCGGATCAAACGGTGGGTGCTaGGCTCCATACACATGCTGGATGCTGCCCGGGACCTTGCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: DLSKVPCNSGSNGGC*APYTCWMLPGTLLL Trigger: CAACAGCAAGGTCCCGGGCAGCATCCAGCATGTGTATGGAGCCCAGCACCCACCGTTTGATCCGCTGTTACATGGCACCTTGCTCAAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS CCA 90 bp | TCAGATGTCCCACTCAGTGTCACTGTGGCCGAGTGGGGAAGAGACTaGGACCGTTGCAGAGGGACTGTATCACCGGTGCTCTCTGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SDVPLSVTVAEWGRD*DRCRGTVSPVLSEG Trigger: TCCTTCAGAGAGCACCGGTGATACAGTCCCTCTGCAACGGTCCCAGTCTCTTCCCCACTCGGCCACAGTGACACTGAGTGGGACATCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063414.9 ENSMUST00000229242.2 |
||
| CDS CCA 90 bp | AGTCAGCAAGGGCATGTGGGTCAGATGTCCCACTCAGTGTCACTGTaGCCGAGTGGGGAAGAGACTGGGACCGTTGCAGAGGGACTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: SQQGHVGQMSHSVSL*PSGEETGTVAEGLY Trigger: ATACAGTCCCTCTGCAACGGTCCCAGTCTCTTCCCCACTCGGCCACAGTGACACTGAGTGGGACATCTGACCCACATGCCCTTGCTGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063414.9 ENSMUST00000229242.2 |
||
| CDS CCA 90 bp | AGTAGGTGTCAGCCTCAATGTTGCGAAGCACCTCTGCAGGCACACTaGAGACATCGACCTTGTCCACGTCCTCCCGGTCTGTGTACTCGC | + |
|
Preference number: 5 (lower is better) Translates to: SRCQPQCCEAPLQAH*RHRPCPRPPGLCTR Trigger: GCGAGTACACAGACCGGGAGGACGTGGACAAGGTCGATGTCTCCAGTGTGCCTGCAGAGGTGCTTCGCAACATTGAGGCTGACACCTACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS TCA 90 bp | TCTGGTTCTGTCGTCTTCTGTGAAGGCTGGCTCTGCCTCTGGCTGTaGTTGCGCAGGACACGATGTGCTGTCTCCATGACCACCTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SGSVVFCEGWLCLWL*LRRTRCAVSMTTSE Trigger: CTCTGAGGTGGTCATGGAGACAGCACATCGTGTCCTGCGCAATCACAGCCAGAGGCAGAGCCAGCCTTCACAGAAGACGACAGAACCAGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063414.9 ENSMUST00000229242.2 |
||
| CDS-3UTR CAA 90 bp | GCTTTCCTTATAACTGGGTGCCTCTCACCCAGGACAGGCACTGGTCTGAGGGAGCCAGCAAGCAGCTGTTaGAACTTGTCCAGCCGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: AFLITGCLSPRTGTGLREPASSC*NLSSRE Trigger: CTCTCGGCTGGACAAGTTCAAACAGCTGCTTGCTGG...CTCCCTCAGACCAGTGCCTGTCCTGGGTGAGAGGCACCCAGTTATAAGGAAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR CAA 90 bp | CCTGGGCTCTCTTTGGTATCTCATCAAACTAGGCTGCCTATCCTGCCAGCCCTGGTGTCAGCCTCAATGTaGCGAAGCACCTCTGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PGLSLVSHQTRLPILPALVSASM*RSTSAG Trigger: GCCTGCAGAGGTGCTTCGCAACATTGAGGCTGACAC...CAGGGCTGGCAGGATAGGCAGCCTAGTTTGATGAGATACCAAAGAGAGCCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS TCA 90 bp | CTGTTTGAACTTGTCCAGCCGAGAGGTCTCTCTCTTACTCAGGGCTaGGTCAGCAAGGGCATGTGGGTCAGATGTCCCACTCAGTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LFELVQPRGLSLTQG*VSKGMWVRCPTQCH Trigger: GTGACACTGAGTGGGACATCTGACCCACATGCCCTTGCTGACTCAGCCCTGAGTAAGAGAGAGACCTCTCGGCTGGACAAGTTCAAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063414.9 ENSMUST00000229242.2 |
||
| CDS TCA 90 bp | TCCGTAATTCCTCAAGGTCTGTGTTGGGGCCAGCAAGCAGCTGTTTaGACTTGTCCAGCCGAGAGGTCTCTCTCTTACTCAGGGCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SVIPQGLCWGQQAAV*TCPAERSLSYSGLS Trigger: ACTCAGCCCTGAGTAAGAGAGAGACCTCTCGGCTGGACAAGTTCAAACAGCTGCTTGCTGGCCCCAACACAGACCTTGAGGAATTACGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR CAA 90 bp | GCCAGCGTCTCGTACACCCAGTCAAGCATTTGCACACATAAAAATACATTCAGGCCCGGGACCTTGCTGTaGCTGCGCTTCCAGAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: ASVSYTQSSICTHKNTFRPGTLL*LRFQNC Trigger: GCAGTTCTGGAAGCGCAGCAACAGCAAGGTCCCGGG...CCTGAATGTATTTTTATGTGTGCAAATGCTTGACTGGGTGTACGAGACGCTGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR CAA 90 bp | CCTGGGCTCTCTTTGGTATCTCATCAAACTAGGCTGCCTATCCTGCCAGCCCTGCAAGCATCACTGGTGTaGCTCTCAAACTCCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PGLSLVSHQTRLPILPALQASLV*LSNSWK Trigger: CTTCCAGGAGTTTGAGAGCAACACCAGTGATGCTTG...CAGGGCTGGCAGGATAGGCAGCCTAGTTTGATGAGATACCAAAGAGAGCCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR CAA 90 bp | GGAGTCTCTCCTGGGCTCTCTTTGGTATCTCATCAAACTAGGCTGCCTATCCTGTTGGACGAACTGGCTTaGGGATTCCGGACCAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GVSPGLSLVSHQTRLPILLDELA*GFRTSS Trigger: TGAGCTGGTCCGGAATCCCAAAGCCAGTTCGTCCAA...CAGGATAGGCAGCCTAGTTTGATGAGATACCAAAGAGAGCCCAGGAGAGACTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR CAA 90 bp | TCCTTGTCATCTCATAAAAACACCATGGGGCAGATCGTTATGGGCCTACCCTTCACCTTGGGCGTGGACTaGAGCAAGGTGCCATGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: SLSSHKNTMGQIVMGLPFTLGVD*SKVPCN Trigger: GTTACATGGCACCTTGCTCAAGTCCACGCCCAAGGT...GAAGGGTAGGCCCATAACGATCTGCCCCATGGTGTTTTTATGAGATGACAAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS-3UTR CAA 90 bp | GCCAGCGTCTCGTACACCCAGTCAAGCATTTGCACACATAAAAATACATTCAGGAAGAGACTGGGACCGTaGCAGAGGGACTGTATCACC | + |
|
Preference number: 5 (lower is better) Translates to: ASVSYTQSSICTHKNTFRKRLGP*QRDCIT Trigger: GGTGATACAGTCCCTCTGCAACGGTCCCAGTCTCTT...CCTGAATGTATTTTTATGTGTGCAAATGCTTGACTGGGTGTACGAGACGCTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS CCA 90 bp | ATTCCTTCTGTTTCCTCTGCAGCGTGGCTGGTCTTCGGTCAACATTaGCAGGAAGGTAACCTGAGAGAAGTTTCCATGTCATTGGACGAA | + |
|
Preference number: 5 (lower is better) Translates to: IPSVSSAAWLVFGQH*QEGNLREVSMSLDE Trigger: TTCGTCCAATGACATGGAAACTTCTCTCAGGTTACCTTCCTGCCAATGTTGACCGAAGACCAGCCACGCTGCAGAGGAAACAGAAGGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS GCA 72 bp | CATACACATGCTGGATGCTGCCCGGGACCTTGCTGTTaGTGCGCTTCCAGAACTGCTTCCTGGCCCCGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: HTHAGCCPGPCC*CASRTASWPRR Trigger: GCGACGGGGCCAGGAAGCAGTTCTGGAAGCGCAGCAACAGCAAGGTCCCGGGCAGCATCCAGCATGTGTATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS CAA 72 bp | CCATACACATGCTGGATGCTGCCCGGGACCTTGCTGTaGCTGCGCTTCCAGAACTGCTTCCTGGCCCCGTCG | + |
|
Preference number: 6 (lower is better) Translates to: PYTCWMLPGTLL*LRFQNCFLAPS Trigger: CGACGGGGCCAGGAAGCAGTTCTGGAAGCGCAGCAACAGCAAGGTCCCGGGCAGCATCCAGCATGTGTATGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS CAA 72 bp | CTGACCCGCTTGGCCTTCACCGGAGTGGTGGGCACCTaGGGCGTGGACTTGAGCAAGGTGCCATGTAACAGC | + |
|
Preference number: 6 (lower is better) Translates to: LTRLAFTGVVGT*GVDLSKVPCNS Trigger: GCTGTTACATGGCACCTTGCTCAAGTCCACGCCCAAGGTGCCCACCACTCCGGTGAAGGCCAAGCGGGTCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS CAA 72 bp | GTGTTGCTCTCAAACTCCTGGAAGGTGCTGACCCGCTaGGCCTTCACCGGAGTGGTGGGCACCTTGGGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: VLLSNSWKVLTR*AFTGVVGTLGV Trigger: CACGCCCAAGGTGCCCACCACTCCGGTGAAGGCCAAGCGGGTCAGCACCTTCCAGGAGTTTGAGAGCAACAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063414.9 ENSMUST00000229242.2 |
||
| CDS CAA 90 bp | GCATCACTGGTGTTGCTCTCAAACTCCTGGAAGGTGCTGACCCGCTaGGCCTTCACCGGAGTGGTGGGCACCTTGGGCGTGGACTTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: ASLVLLSNSWKVLTR*AFTGVVGTLGVDLS Trigger: GCTCAAGTCCACGCCCAAGGTGCCCACCACTCCGGTGAAGGCCAAGCGGGTCAGCACCTTCCAGGAGTTTGAGAGCAACACCAGTGATGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063414.9 ENSMUST00000229242.2 |
||
| CDS TCA 72 bp | GGGCTGAGGCTCTGGCTCTGGTTCTGTCGTCTTCTGTaGAGGCTGGCTCTGCCTCTGGCTGTGATTGCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GLRLWLWFCRLL*RLALPLAVIAQ Trigger: CTGCGCAATCACAGCCAGAGGCAGAGCCAGCCTTCACAGAAGACGACAGAACCAGAGCCAGAGCCTCAGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063414.9 ENSMUST00000229242.2 |
||
| CDS GCA 72 bp | CAGGCGAAGGTCACCACTGGGAGGTACAGGAGGCTCTaGTATGGGCTGAGGCTCTGGCTCTGGTTCTGTCGT | + |
|
Preference number: 6 (lower is better) Translates to: QAKVTTGRYRRL*YGLRLWLWFCR Trigger: ACGACAGAACCAGAGCCAGAGCCTCAGCCCATAGCAGAGCCTCCTGTACCTCCCAGTGGTGACCTTCGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063414.9 ENSMUST00000229242.2 |
||
| CDS CCA 72 bp | CCACTCAGTGTCACTGTGGCCGAGTGGGGAAGAGACTaGGACCGTTGCAGAGGGACTGTATCACCGGTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: PLSVTVAEWGRD*DRCRGTVSPVL Trigger: GAGCACCGGTGATACAGTCCCTCTGCAACGGTCCCAGTCTCTTCCCCACTCGGCCACAGTGACACTGAGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063414.9 ENSMUST00000229242.2 |
||
| CDS CCA 72 bp | GGGCATGTGGGTCAGATGTCCCACTCAGTGTCACTGTaGCCGAGTGGGGAAGAGACTGGGACCGTTGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: GHVGQMSHSVSL*PSGEETGTVAE Trigger: CTCTGCAACGGTCCCAGTCTCTTCCCCACTCGGCCACAGTGACACTGAGTGGGACATCTGACCCACATGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063414.9 ENSMUST00000229242.2 |
||
| CDS CAA 90 bp | TGGAAGGTGCTGACCCGCTTGGCCTTCACCGGAGTGGTGGGCACCTaGGGCGTGGACTTGAGCAAGGTGCCATGTAACAGCGGATCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: WKVLTRLAFTGVVGT*GVDLSKVPCNSGSN Trigger: GTTTGATCCGCTGTTACATGGCACCTTGCTCAAGTCCACGCCCAAGGTGCCCACCACTCCGGTGAAGGCCAAGCGGGTCAGCACCTTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS TCA 72 bp | CCTTCACCGGAGTGGTGGGCACCTTGGGCGTGGACTTaGGCAAGGTGCCATGTAACAGCGGATCAAACGGTG | + |
|
Preference number: 6 (lower is better) Translates to: PSPEWWAPWAWT*ARCHVTADQTV Trigger: CACCGTTTGATCCGCTGTTACATGGCACCTTGCTCAAGTCCACGCCCAAGGTGCCCACCACTCCGGTGAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS TCA 72 bp | CATCACTGGTGTTGCTCTCAAACTCCTGGAAGGTGCTaGCCCGCTTGGCCTTCACCGGAGTGGTGGGCACCT | + |
|
Preference number: 6 (lower is better) Translates to: HHWCCSQTPGRC*PAWPSPEWWAP Trigger: AGGTGCCCACCACTCCGGTGAAGGCCAAGCGGGTCAGCACCTTCCAGGAGTTTGAGAGCAACACCAGTGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063414.9 ENSMUST00000229242.2 |
||
| CDS GCA 72 bp | AGCAAGGTGCCATGTAACAGCGGATCAAACGGTGGGTaGTGGGCTCCATACACATGCTGGATGCTGCCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: SKVPCNSGSNGG*WAPYTCWMLPG Trigger: CCCGGGCAGCATCCAGCATGTGTATGGAGCCCAGCACCCACCGTTTGATCCGCTGTTACATGGCACCTTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS CCA 72 bp | AAGGTGCCATGTAACAGCGGATCAAACGGTGGGTGCTaGGCTCCATACACATGCTGGATGCTGCCCGGGACC | + |
|
Preference number: 6 (lower is better) Translates to: KVPCNSGSNGGC*APYTCWMLPGT Trigger: GGTCCCGGGCAGCATCCAGCATGTGTATGGAGCCCAGCACCCACCGTTTGATCCGCTGTTACATGGCACCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS CCA 72 bp | CAGCCTCAATGTTGCGAAGCACCTCTGCAGGCACACTaGAGACATCGACCTTGTCCACGTCCTCCCGGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: QPQCCEAPLQAH*RHRPCPRPPGL Trigger: CAGACCGGGAGGACGTGGACAAGGTCGATGTCTCCAGTGTGCCTGCAGAGGTGCTTCGCAACATTGAGGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS CAA 72 bp | GCCTTCACCGGAGTGGTGGGCACCTTGGGCGTGGACTaGAGCAAGGTGCCATGTAACAGCGGATCAAACGGT | + |
|
Preference number: 6 (lower is better) Translates to: AFTGVVGTLGVD*SKVPCNSGSNG Trigger: ACCGTTTGATCCGCTGTTACATGGCACCTTGCTCAAGTCCACGCCCAAGGTGCCCACCACTCCGGTGAAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
||
| CDS CAA 90 bp | CTGGGGTCCCAGGCAAGGTCTGTGTTGGGGCCAGCAAGCAGCTGTTaGAACTTGTCCAGCCGAGAGGTCTCTCTCTTACTCAGGGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: LGSQARSVLGPASSC*NLSSREVSLLLRAE Trigger: CTCAGCCCTGAGTAAGAGAGAGACCTCTCGGCTGGACAAGTTCAAACAGCTGCTTGCTGGCCCCAACACAGACCTTGCCTGGGACCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229242.2 |
||
| CDS GCA 72 bp | GCTCTGCCTCTGGCTGTGATTGCGCAGGACACGATGTaGTGTCTCCATGACCACCTCAGAGTTCAGGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: ALPLAVIAQDTM*CLHDHLRVQAL Trigger: GAGAGCCTGAACTCTGAGGTGGTCATGGAGACAGCACATCGTGTCCTGCGCAATCACAGCCAGAGGCAGAGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063414.9 ENSMUST00000229242.2 |
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| CDS CCA 72 bp | GCATCCCAAGCATCACTGGTGTTGCTCTCAAACTCCTaGAAGGTGCTGACCCGCTTGGCCTTCACCGGAGTG | + |
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Preference number: 6 (lower is better) Translates to: ASQASLVLLSNS*KVLTRLAFTGV Trigger: CACTCCGGTGAAGGCCAAGCGGGTCAGCACCTTCCAGGAGTTTGAGAGCAACACCAGTGATGCTTGGGATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063414.9 ENSMUST00000229242.2 |
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| CDS CAA 90 bp | AGGAGCTCATCATCGTCTTCACCGGCATCCCAAGCATCACTGGTGTaGCTCTCAAACTCCTGGAAGGTGCTGACCCGCTTGGCCTTCACC | + |
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Preference number: 6 (lower is better) Translates to: RSSSSSSPASQASLV*LSNSWKVLTRLAFT Trigger: GGTGAAGGCCAAGCGGGTCAGCACCTTCCAGGAGTTTGAGAGCAACACCAGTGATGCTTGGGATGCCGGTGAAGACGATGATGAGCTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063414.9 ENSMUST00000229242.2 |
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| CDS CAA 72 bp | TCATCGTCTTCACCGGCATCCCAAGCATCACTGGTGTaGCTCTCAAACTCCTGGAAGGTGCTGACCCGCTTG | + |
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Preference number: 6 (lower is better) Translates to: SSSSPASQASLV*LSNSWKVLTRL Trigger: CAAGCGGGTCAGCACCTTCCAGGAGTTTGAGAGCAACACCAGTGATGCTTGGGATGCCGGTGAAGACGATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063414.9 ENSMUST00000229242.2 |
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| CDS CAA 72 bp | AGGTCTGTGTTGGGGCCAGCAAGCAGCTGTTTGAACTaGTCCAGCCGAGAGGTCTCTCTCTTACTCAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: RSVLGPASSCLN*SSREVSLLLRA Trigger: AGCCCTGAGTAAGAGAGAGACCTCTCGGCTGGACAAGTTCAAACAGCTGCTTGCTGGCCCCAACACAGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063414.9 ENSMUST00000229242.2 |
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| CDS CAA 72 bp | CAGGCAAGGTCTGTGTTGGGGCCAGCAAGCAGCTGTTaGAACTTGTCCAGCCGAGAGGTCTCTCTCTTACTC | + |
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Preference number: 6 (lower is better) Translates to: QARSVLGPASSC*NLSSREVSLLL Trigger: GAGTAAGAGAGAGACCTCTCGGCTGGACAAGTTCAAACAGCTGCTTGCTGGCCCCAACACAGACCTTGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229242.2 |
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| CDS TCA 72 bp | CCTCAAGGTCTGTGTTGGGGCCAGCAAGCAGCTGTTTaGACTTGTCCAGCCGAGAGGTCTCTCTCTTACTCA | + |
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Preference number: 6 (lower is better) Translates to: PQGLCWGQQAAV*TCPAERSLSYS Trigger: TGAGTAAGAGAGAGACCTCTCGGCTGGACAAGTTCAAACAGCTGCTTGCTGGCCCCAACACAGACCTTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| CDS TCA 72 bp | AGGCAAGGTCTGTGTTGGGGCCAGCAAGCAGCTGTTTaGACTTGTCCAGCCGAGAGGTCTCTCTCTTACTCA | + |
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Preference number: 6 (lower is better) Translates to: RQGLCWGQQAAV*TCPAERSLSYS Trigger: TGAGTAAGAGAGAGACCTCTCGGCTGGACAAGTTCAAACAGCTGCTTGCTGGCCCCAACACAGACCTTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229242.2 |
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| CDS CAA 72 bp | TCCTCAAGGTCTGTGTTGGGGCCAGCAAGCAGCTGTTaGAACTTGTCCAGCCGAGAGGTCTCTCTCTTACTC | + |
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Preference number: 6 (lower is better) Translates to: SSRSVLGPASSC*NLSSREVSLLL Trigger: GAGTAAGAGAGAGACCTCTCGGCTGGACAAGTTCAAACAGCTGCTTGCTGGCCCCAACACAGACCTTGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| CDS CAA 72 bp | GACCAGCTCAGCTTCCGTAATTCCTCAAGGTCTGTGTaGGGGCCAGCAAGCAGCTGTTTGAACTTGTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: DQLSFRNSSRSV*GPASSCLNLSS Trigger: GCTGGACAAGTTCAAACAGCTGCTTGCTGGCCCCAACACAGACCTTGAGGAATTACGGAAGCTGAGCTGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| CDS CAA 90 bp | TTCCGTAATTCCTCAAGGTCTGTGTTGGGGCCAGCAAGCAGCTGTTaGAACTTGTCCAGCCGAGAGGTCTCTCTCTTACTCAGGGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: FRNSSRSVLGPASSC*NLSSREVSLLLRAE Trigger: CTCAGCCCTGAGTAAGAGAGAGACCTCTCGGCTGGACAAGTTCAAACAGCTGCTTGCTGGCCCCAACACAGACCTTGAGGAATTACGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| CDS CAA 90 bp | GGTCAACATTGGCAGGAAGGTAACCTGAGAGAAGTTTCCATGTCATaGGACGAACTGGCTTTGGGATTCCGGACCAGCTCAGCTTCCGTA | + |
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Preference number: 6 (lower is better) Translates to: GQHWQEGNLREVSMS*DELALGFRTSSASV Trigger: TACGGAAGCTGAGCTGGTCCGGAATCCCAAAGCCAGTTCGTCCAATGACATGGAAACTTCTCTCAGGTTACCTTCCTGCCAATGTTGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| CDS TCA 72 bp | AACAAGATCCTTTCGAAAATCTCTGTCACCTTGGGCTaGAGAATCAGCGCTTCCGGGCTCATCCGAGGGATG | + |
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Preference number: 6 (lower is better) Translates to: NKILSKISVTLG*RISASGLIRGM Trigger: CATCCCTCGGATGAGCCCGGAAGCGCTGATTCTTCAGCCCAAGGTGACAGAGATTTTCGAAAGGATCTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| CDS CCA 72 bp | GTTTCCTCTGCAGCGTGGCTGGTCTTCGGTCAACATTaGCAGGAAGGTAACCTGAGAGAAGTTTCCATGTCA | + |
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Preference number: 6 (lower is better) Translates to: VSSAAWLVFGQH*QEGNLREVSMS Trigger: TGACATGGAAACTTCTCTCAGGTTACCTTCCTGCCAATGTTGACCGAAGACCAGCCACGCTGCAGAGGAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| CDS CAA 72 bp | TGGCAGGAAGGTAACCTGAGAGAAGTTTCCATGTCATaGGACGAACTGGCTTTGGGATTCCGGACCAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: WQEGNLREVSMS*DELALGFRTSS Trigger: TGAGCTGGTCCGGAATCCCAAAGCCAGTTCGTCCAATGACATGGAAACTTCTCTCAGGTTACCTTCCTGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| CDS CAA 90 bp | GAAGGTAACCTGAGAGAAGTTTCCATGTCATTGGACGAACTGGCTTaGGGATTCCGGACCAGCTCAGCTTCCGTAATTCCTCAAGGTCTG | + |
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Preference number: 6 (lower is better) Translates to: EGNLREVSMSLDELA*GFRTSSASVIPQGL Trigger: CAGACCTTGAGGAATTACGGAAGCTGAGCTGGTCCGGAATCCCAAAGCCAGTTCGTCCAATGACATGGAAACTTCTCTCAGGTTACCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| CDS CAA 72 bp | CTGAGAGAAGTTTCCATGTCATTGGACGAACTGGCTTaGGGATTCCGGACCAGCTCAGCTTCCGTAATTCCT | + |
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Preference number: 6 (lower is better) Translates to: LREVSMSLDELA*GFRTSSASVIP Trigger: AGGAATTACGGAAGCTGAGCTGGTCCGGAATCCCAAAGCCAGTTCGTCCAATGACATGGAAACTTCTCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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| CDS GCA 72 bp | TGCTCAATGAAAGCAAAGTATTCCTTCTGTTTCCTCTaGAGCGTGGCTGGTCTTCGGTCAACATTGGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: CSMKAKYSFCFL*SVAGLRSTLAG Trigger: TCCTGCCAATGTTGACCGAAGACCAGCCACGCTGCAGAGGAAACAGAAGGAATACTTTGCTTTCATTGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063414.9 |
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