Pregenerated sensors for TBC1D20 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027465Ensembl transcript IDs: ENSMUST00000028963.14, ENSMUST00000144252.8, ENSMUST00000147591.2
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATCCCATGGATCCTGTACACCTCTCCTGGAGGAGCCCAGGTACAGTaGGGCTGGTGGTGTGCGGTTCCTGCCAAACCCTGTCTACGTGCT | + |
|
Preference number: 1 (lower is better) Translates to: IPWILYTSPGGAQVQ*GWWCAVPAKPCLRA Trigger: AGCACGTAGACAGGGTTTGGCAGGAACCGCACACCACCAGCCTCACTGTACCTGGGCTCCTCCAGGAGAGGTGTACAGGATCCATGGGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR TCA 90 bp | CCAGTGCCACCTGCTTGCTTGGATGCAGAACAGTGGCTTGGACCCTaGGCTCATGCCCTTCCCTCAGCCAGCAAGCCTCCTACAGTCTTC | + |
|
Preference number: 1 (lower is better) Translates to: PVPPACLDAEQWLGP*AHALPSASKPPTVF Trigger: GAAGACTGTAGGAGGCTTGCTGGCTGAGGGAAGGGCATGAGCTCAGGGTCCAAGCCACTGTTCTGCATCCAAGCAAGCAGGTGGCACTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR GCA 90 bp | ACAGTGAGGCTGGTGGTGTGCGGTTCCTGCCAAACCCTGTCTACGTaGTGGCAAGTTTCCAAGGACATTCCCAGCCTGAGACCAGCAGCG | + |
|
Preference number: 1 (lower is better) Translates to: TVRLVVCGSCQTLST*WQVSKDIPSLRPAA Trigger: CGCTGCTGGTCTCAGGCTGGGAATGTCCTTGGAAACTTGCCAGCACGTAGACAGGGTTTGGCAGGAACCGCACACCACCAGCCTCACTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR GCA 90 bp | GTACACCTCTCCTGGAGGAGCCCAGGTACAGTGAGGCTGGTGGTGTaGGGTTCCTGCCAAACCCTGTCTACGTGCTGGCAAGTTTCCAAG | + |
|
Preference number: 1 (lower is better) Translates to: VHLSWRSPGTVRLVV*GSCQTLSTCWQVSK Trigger: CTTGGAAACTTGCCAGCACGTAGACAGGGTTTGGCAGGAACCGCACACCACCAGCCTCACTGTACCTGGGCTCCTCCAGGAGAGGTGTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR GCA 90 bp | CCACTCTTCAGCTCCTCACAAGCCAGTGCCACCTGCTTGCTTGGATaGAGAACAGTGGCTTGGACCCTGAGCTCATGCCCTTCCCTCAGC | + |
|
Preference number: 1 (lower is better) Translates to: PLFSSSQASATCLLG*RTVAWTLSSCPSLS Trigger: GCTGAGGGAAGGGCATGAGCTCAGGGTCCAAGCCACTGTTCTGCATCCAAGCAAGCAGGTGGCACTGGCTTGTGAGGAGCTGAAGAGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR GCA 90 bp | ACCTGCTTGCTTGGATGCAGAACAGTGGCTTGGACCCTGAGCTCATaGCCTTCCCTCAGCCAGCAAGCCTCCTACAGTCTTCAAGCAGGC | + |
|
Preference number: 1 (lower is better) Translates to: TCLLGCRTVAWTLSS*PSLSQQASYSLQAG Trigger: GCCTGCTTGAAGACTGTAGGAGGCTTGCTGGCTGAGGGAAGGGCATGAGCTCAGGGTCCAAGCCACTGTTCTGCATCCAAGCAAGCAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR GCA 90 bp | GTCCTGTTATGGGCACAGACCACTCTTCAGCTCCTCACAAGCCAGTaGCACCTGCTTGCTTGGATGCAGAACAGTGGCTTGGACCCTGAG | + |
|
Preference number: 1 (lower is better) Translates to: VLLWAQTTLQLLTSQ*HLLAWMQNSGLDPE Trigger: CTCAGGGTCCAAGCCACTGTTCTGCATCCAAGCAAGCAGGTGGCACTGGCTTGTGAGGAGCTGAAGAGTGGTCTGTGCCCATAACAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR GCA 90 bp | GAAAGAGGCTGGAGAAATGGCTCAGCAGTTAAGAGCACTTACTGCTaGTTCACCAGAGGCCTGGCATTCAGATCCCAGCACCCACACAGG | + |
|
Preference number: 1 (lower is better) Translates to: ERGWRNGSAVKSTYC*FTRGLAFRSQHPHR Trigger: CCTGTGTGGGTGCTGGGATCTGAATGCCAGGCCTCTGGTGAAGCAGCAGTAAGTGCTCTTAACTGCTGAGCCATTTCTCCAGCCTCTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR CCA 90 bp | ATGGCTCAGCAGTTAAGAGCACTTACTGCTGCTTCACCAGAGGCCTaGCATTCAGATCCCAGCACCCACACAGGCTCCAGGAAACCTGAA | + |
|
Preference number: 1 (lower is better) Translates to: MAQQLRALTAASPEA*HSDPSTHTGSRKPE Trigger: TTCAGGTTTCCTGGAGCCTGTGTGGGTGCTGGGATCTGAATGCCAGGCCTCTGGTGAAGCAGCAGTAAGTGCTCTTAACTGCTGAGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR CCA 90 bp | ACCCCTGACAGAAACCCTTTAATCACAGCAACTTTACCCTCCTTCTaGAAATGGGGAGAGCTTGGTGCCCTGGGTGAGGGAGTAGCTGCT | + |
|
Preference number: 1 (lower is better) Translates to: TPDRNPLITATLPSF*KWGELGALGEGVAA Trigger: AGCAGCTACTCCCTCACCCAGGGCACCAAGCTCTCCCCATTTCCAGAAGGAGGGTAAAGTTGCTGTGATTAAAGGGTTTCTGTCAGGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR GCA 90 bp | TATGAAAGAGGCTGGAGAAATGGCTCAGCAGTTAAGAGCACTTACTaGTGCTTCACCAGAGGCCTGGCATTCAGATCCCAGCACCCACAC | + |
|
Preference number: 1 (lower is better) Translates to: YERGWRNGSAVKSTY*CFTRGLAFRSQHPH Trigger: GTGTGGGTGCTGGGATCTGAATGCCAGGCCTCTGGTGAAGCAGCAGTAAGTGCTCTTAACTGCTGAGCCATTTCTCCAGCCTCTTTCATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR-3UTR GCA 90 bp | TGGAGGAGCCCAGGTACAGTGAGGCTGGTGGTGTGCGGTTCCTGCCAAACCCTGAGTGTCAGGCAGCTCTaGCACCAGCCATCAAAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: WRSPGTVRLVVCGSCQTLSVRQL*HQPSKP Trigger: TGGCTTTGATGGCTGGTGGCAGAGCTGCCTGACACT...CAGGGTTTGGCAGGAACCGCACACCACCAGCCTCACTGTACCTGGGCTCCTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR-3UTR CCA 90 bp | CTGCCCAGCATGCAGAGTGTCCCACTGCATACAATGGGCACAGGAGACAAGGGGAAGCGAGTCAGGAAGTaGCACCGTGGGGTCTGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: LPSMQSVPLHTMGTGDKGKRVRK*HRGVWE Trigger: CTCCCAGACCCCACGGTGCCACTTCCTGACTCGCTT...CCCCTTGTCTCCTGTGCCCATTGTATGCAGTGGGACACTCTGCATGCTGGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR CAA 90 bp | CTCACAAGCCAGTGCCACCTGCTTGCTTGGATGCAGAACAGTGGCTaGGACCCTGAGCTCATGCCCTTCCCTCAGCCAGCAAGCCTCCTA | + |
|
Preference number: 2 (lower is better) Translates to: LTSQCHLLAWMQNSG*DPELMPFPQPASLL Trigger: TAGGAGGCTTGCTGGCTGAGGGAAGGGCATGAGCTCAGGGTCCAAGCCACTGTTCTGCATCCAAGCAAGCAGGTGGCACTGGCTTGTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR CAA 90 bp | GGGCACAGACCACTCTTCAGCTCCTCACAAGCCAGTGCCACCTGCTaGCTTGGATGCAGAACAGTGGCTTGGACCCTGAGCTCATGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: GHRPLFSSSQASATC*LGCRTVAWTLSSCP Trigger: AGGGCATGAGCTCAGGGTCCAAGCCACTGTTCTGCATCCAAGCAAGCAGGTGGCACTGGCTTGTGAGGAGCTGAAGAGTGGTCTGTGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR-3UTR GCA 90 bp | CTGCCCAGCATGCAGAGTGTCCCACTGCATACAATGGGCACAGGAGACAAGGGGTTTCAACAGGAGAGGTaGAGAGAGCACTCGGGTCCG | + |
|
Preference number: 2 (lower is better) Translates to: LPSMQSVPLHTMGTGDKGFQQER*REHSGP Trigger: CGGACCCGAGTGCTCTCTGCACCTCTCCTGTTGAAA...CCCCTTGTCTCCTGTGCCCATTGTATGCAGTGGGACACTCTGCATGCTGGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR-3UTR CCA 90 bp | TCTACGTGCTGGCAAGTTTCCAAGGACATTCCCAGCCTGAGACCAGCAGCGGAACCTGAAGCCCACCTATaGCCTCTGTGGGCACCTGTA | + |
|
Preference number: 2 (lower is better) Translates to: STCWQVSKDIPSLRPAAEPEAHL*PLWAPV Trigger: TACAGGTGCCCACAGAGGCCATAGGTGGGCTTCAGG...TTCCGCTGCTGGTCTCAGGCTGGGAATGTCCTTGGAAACTTGCCAGCACGTAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR-3UTR TCA 90 bp | AGAGCCACTTTTCAACAGGAGAGGTGCAGAGAGCACTCGGGTCCGGCAAGCCAGCAGACAGAACACCCCTaGCAGAAACCCTTTAATCAC | + |
|
Preference number: 2 (lower is better) Translates to: RATFQQERCREHSGPASQQTEHP*QKPFNH Trigger: GTGATTAAAGGGTTTCTGTCAGGGGTGTTCTGTCTG...CTGGCTTGCCGGACCCGAGTGCTCTCTGCACCTCTCCTGTTGAAAAGTGGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR-3UTR CCA 90 bp | TGGAGGAGCCCAGGTACAGTGAGGCTGGTGGTGTGCGGTTCCTGCCAAACCCTGAACTATGAAAGAGGCTaGAGAAATGGCTCAGCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: WRSPGTVRLVVCGSCQTLNYERG*RNGSAV Trigger: AACTGCTGAGCCATTTCTCCAGCCTCTTTCATAGTT...CAGGGTTTGGCAGGAACCGCACACCACCAGCCTCACTGTACCTGGGCTCCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR-3UTR CCA 90 bp | TCTACGTGCTGGCAAGTTTCCAAGGACATTCCCAGCCTGAGACCAGCAGCGGAATGGCACCGTGGGGTCTaGGAGTGTTCACAAACAACT | + |
|
Preference number: 2 (lower is better) Translates to: STCWQVSKDIPSLRPAAEWHRGV*ECSQTT Trigger: AGTTGTTTGTGAACACTCCCAGACCCCACGGTGCCA...TTCCGCTGCTGGTCTCAGGCTGGGAATGTCCTTGGAAACTTGCCAGCACGTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR-3UTR TCA 90 bp | CATGAAGGAACTATGAAAGAGGCTGGAGAAATGGCTCAGCAGTTAAGAGCACTTACATTCCTCTGCACATaGGCTCTAGGCTGGGATCAT | + |
|
Preference number: 2 (lower is better) Translates to: HEGTMKEAGEMAQQLRALTFLCT*ALGWDH Trigger: ATGATCCCAGCCTAGAGCTCATGTGCAGAGGAATGT...AAGTGCTCTTAACTGCTGAGCCATTTCTCCAGCCTCTTTCATAGTTCCTTCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR-3UTR CCA 90 bp | AGACCCAATAGTATTTGTCACCTCATCACTCTGGGTCCTGGAAACTTCTCCTTTGTCATCCAGGATAATTaGGAGCCATGGCAGGAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: RPNSICHLITLGPGNFSFVIQDN*EPWQED Trigger: ATCCTCCTGCCATGGCTCCCAATTATCCTGGATGAC...AAAGGAGAAGTTTCCAGGACCCAGAGTGATGAGGTGACAAATACTATTGGGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR-3UTR GCA 90 bp | AGACCCAATAGTATTTGTCACCTCATCACTCTGGGTCCTGGAAACTTCTCCTTTACTTGGGTAACCAGGTaGTCCAGAGCCACTTTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: RPNSICHLITLGPGNFSFTWVTR*SRATFQ Trigger: TTGAAAAGTGGCTCTGGAGCACCTGGTTACCCAAGT...AAAGGAGAAGTTTCCAGGACCCAGAGTGATGAGGTGACAAATACTATTGGGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR-3UTR CCA 90 bp | AGACCCAATAGTATTTGTCACCTCATCACTCTGGGTCCTGGAAACTTCTCCTTTACTTTACCCTCCTTCTaGAAATGGGGAGAGCTTGGT | + |
|
Preference number: 2 (lower is better) Translates to: RPNSICHLITLGPGNFSFTLPSF*KWGELG Trigger: ACCAAGCTCTCCCCATTTCCAGAAGGAGGGTAAAGT...AAAGGAGAAGTTTCCAGGACCCAGAGTGATGAGGTGACAAATACTATTGGGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR-3UTR GCA 90 bp | CATAAAAATTTAATTAGAACCCAGCTTGAGTCTATCTCTGATTCTGACCAGCTAAAGGCTGGACCATCCTaGCTGCTTTGTCTAAAGATA | + |
|
Preference number: 2 (lower is better) Translates to: HKNLIRTQLESISDSDQLKAGPS*LLCLKI Trigger: TATCTTTAGACAAAGCAGGCAGGATGGTCCAGCCTT...TAGCTGGTCAGAATCAGAGATAGACTCAAGCTGGGTTCTAATTAAATTTTTATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR-3UTR CCA 90 bp | CATAAAAATTTAATTAGAACCCAGCTTGAGTCTATCTCTGATTCTGACCAGCTAGATACTCAAGACACATaGTGCTATAAGGAGGGCATC | + |
|
Preference number: 2 (lower is better) Translates to: HKNLIRTQLESISDSDQLDTQDT*CYKEGI Trigger: GATGCCCTCCTTATAGCACCATGTGTCTTGAGTATC...TAGCTGGTCAGAATCAGAGATAGACTCAAGCTGGGTTCTAATTAAATTTTTATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR GCA 72 bp | TCCTGGAGGAGCCCAGGTACAGTGAGGCTGGTGGTGTaGGGTTCCTGCCAAACCCTGTCTACGTGCTGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: SWRSPGTVRLVV*GSCQTLSTCWQ Trigger: TTGCCAGCACGTAGACAGGGTTTGGCAGGAACCGCACACCACCAGCCTCACTGTACCTGGGCTCCTCCAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR TCA 72 bp | ATCCTGTACACCTCTCCTGGAGGAGCCCAGGTACAGTaGGGCTGGTGGTGTGCGGTTCCTGCCAAACCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: ILYTSPGGAQVQ*GWWCAVPAKPC Trigger: ACAGGGTTTGGCAGGAACCGCACACCACCAGCCTCACTGTACCTGGGCTCCTCCAGGAGAGGTGTACAGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR GCA 72 bp | AGCCCAGGTACAGTGAGGCTGGTGGTGTGCGGTTCCTaGCAAACCCTGTCTACGTGCTGGCAAGTTTCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: SPGTVRLVVCGS*QTLSTCWQVSK Trigger: CTTGGAAACTTGCCAGCACGTAGACAGGGTTTGGCAGGAACCGCACACCACCAGCCTCACTGTACCTGGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR GCA 72 bp | AGCTCCTCACAAGCCAGTGCCACCTGCTTGCTTGGATaGAGAACAGTGGCTTGGACCCTGAGCTCATGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: SSSQASATCLLG*RTVAWTLSSCP Trigger: AGGGCATGAGCTCAGGGTCCAAGCCACTGTTCTGCATCCAAGCAAGCAGGTGGCACTGGCTTGTGAGGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR CCA 72 bp | AGACCAAGTGATCCCATGGATCCTGTACACCTCTCCTaGAGGAGCCCAGGTACAGTGAGGCTGGTGGTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: RPSDPMDPVHLS*RSPGTVRLVVC Trigger: GCACACCACCAGCCTCACTGTACCTGGGCTCCTCCAGGAGAGGTGTACAGGATCCATGGGATCACTTGGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR CCA 72 bp | AGTGCCACCTGCTTGCTTGGATGCAGAACAGTGGCTTaGACCCTGAGCTCATGCCCTTCCCTCAGCCAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: SATCLLGCRTVA*TLSSCPSLSQQ Trigger: TTGCTGGCTGAGGGAAGGGCATGAGCTCAGGGTCCAAGCCACTGTTCTGCATCCAAGCAAGCAGGTGGCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR GCA 72 bp | CTGGTGGTGTGCGGTTCCTGCCAAACCCTGTCTACGTaGTGGCAAGTTTCCAAGGACATTCCCAGCCTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LVVCGSCQTLST*WQVSKDIPSLR Trigger: TCTCAGGCTGGGAATGTCCTTGGAAACTTGCCAGCACGTAGACAGGGTTTGGCAGGAACCGCACACCACCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR GCA 72 bp | AGACCACTCTTCAGCTCCTCACAAGCCAGTGCCACCTaGTTGCTTGGATGCAGAACAGTGGCTTGGACCCTG | + |
|
Preference number: 3 (lower is better) Translates to: RPLFSSSQASAT*LLGCRTVAWTL Trigger: CAGGGTCCAAGCCACTGTTCTGCATCCAAGCAAGCAGGTGGCACTGGCTTGTGAGGAGCTGAAGAGTGGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR CCA 72 bp | CAGTTAAGAGCACTTACTGCTGCTTCACCAGAGGCCTaGCATTCAGATCCCAGCACCCACACAGGCTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: QLRALTAASPEA*HSDPSTHTGSR Trigger: CCTGGAGCCTGTGTGGGTGCTGGGATCTGAATGCCAGGCCTCTGGTGAAGCAGCAGTAAGTGCTCTTAACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR CCA 72 bp | GTGGTGTGCGGTTCCTGCCAAACCCTGTCTACGTGCTaGCAAGTTTCCAAGGACATTCCCAGCCTGAGACCA | + |
|
Preference number: 3 (lower is better) Translates to: VVCGSCQTLSTC*QVSKDIPSLRP Trigger: TGGTCTCAGGCTGGGAATGTCCTTGGAAACTTGCCAGCACGTAGACAGGGTTTGGCAGGAACCGCACACCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR CCA 72 bp | CTTCAGCTCCTCACAAGCCAGTGCCACCTGCTTGCTTaGATGCAGAACAGTGGCTTGGACCCTGAGCTCATG | + |
|
Preference number: 3 (lower is better) Translates to: LQLLTSQCHLLA*MQNSGLDPELM Trigger: CATGAGCTCAGGGTCCAAGCCACTGTTCTGCATCCAAGCAAGCAGGTGGCACTGGCTTGTGAGGAGCTGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR GCA 72 bp | GGCTGGAGAAATGGCTCAGCAGTTAAGAGCACTTACTaGTGCTTCACCAGAGGCCTGGCATTCAGATCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: GWRNGSAVKSTY*CFTRGLAFRSQ Trigger: CTGGGATCTGAATGCCAGGCCTCTGGTGAAGCAGCAGTAAGTGCTCTTAACTGCTGAGCCATTTCTCCAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR CCA 72 bp | CCTTTAATCACAGCAACTTTACCCTCCTTCTGGAAATaGGGAGAGCTTGGTGCCCTGGGTGAGGGAGTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: PLITATLPSFWK*GELGALGEGVA Trigger: AGCTACTCCCTCACCCAGGGCACCAAGCTCTCCCCATTTCCAGAAGGAGGGTAAAGTTGCTGTGATTAAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR CCA 72 bp | CAGCTTGAGTCTATCTCTGATTCTGACCAGCTAATATaGCCGCTTTTAAGAGGGTCCAGCTGGCTCCCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: QLESISDSDQLI*PLLRGSSWLPG Trigger: GCCTGGGAGCCAGCTGGACCCTCTTAAAAGCGGCCATATTAGCTGGTCAGAATCAGAGATAGACTCAAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR-3UTR CAA 90 bp | TGTCCCACTGCATACAATGGGCACAGGAGACAAGGGGATGGGCAGGGGACATGTACCATCCTGCCTGCTTaGTCTAAAGATACTCAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: CPTAYNGHRRQGDGQGTCTILPA*SKDTQD Trigger: GTCTTGAGTATCTTTAGACAAAGCAGGCAGGATGGT...ACATGTCCCCTGCCCATCCCCTTGTCTCCTGTGCCCATTGTATGCAGTGGGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR CCA 72 bp | AGAAACCCTTTAATCACAGCAACTTTACCCTCCTTCTaGAAATGGGGAGAGCTTGGTGCCCTGGGTGAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: RNPLITATLPSF*KWGELGALGEG Trigger: TCCCTCACCCAGGGCACCAAGCTCTCCCCATTTCCAGAAGGAGGGTAAAGTTGCTGTGATTAAAGGGTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR CCA 72 bp | AGGTGCAATCCTGTCATCCAGGATAATTGGGAGCCATaGCAGGAGGATCAAAAGTTCAAGGCCAGCCTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: RCNPVIQDNWEP*QEDQKFKASLD Trigger: ATCCAGGCTGGCCTTGAACTTTTGATCCTCCTGCCATGGCTCCCAATTATCCTGGATGACAGGATTGCACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR TCA 72 bp | TCATCACTCTGGGTCCTGGAAACTTCTCCTTTGTCCTaGATGATCCCAGTGAATCACTCACCCAAGGCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SSLWVLETSPLS*MIPVNHSPKAR Trigger: CCTTGCCTTGGGTGAGTGATTCACTGGGATCATTCAGGACAAAGGAGAAGTTTCCAGGACCCAGAGTGATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR CCA 72 bp | GAGTATCTCAGGTGCAATCCTGTCATCCAGGATAATTaGGAGCCATGGCAGGAGGATCAAAAGTTCAAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: EYLRCNPVIQDN*EPWQEDQKFKA Trigger: GGCCTTGAACTTTTGATCCTCCTGCCATGGCTCCCAATTATCCTGGATGACAGGATTGCACCTGAGATACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR TCA 72 bp | AAAACAAGCTGCCAAGGGTGGCAGACAGAACACCCCTaGCAGAAACCCTTTAATCACAGCAACTTTACCCTC | + |
|
Preference number: 3 (lower is better) Translates to: KTSCQGWQTEHP*QKPFNHSNFTL Trigger: GAGGGTAAAGTTGCTGTGATTAAAGGGTTTCTGTCAGGGGTGTTCTGTCTGCCACCCTTGGCAGCTTGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR GCA 72 bp | TTCTCCCCTCACTTTCATCCCAAGGCTGGACCATCCTaGCTGCTTTGTCTAAAGATACTCAAGACACATGGT | + |
|
Preference number: 3 (lower is better) Translates to: FSPHFHPKAGPS*LLCLKILKTHG Trigger: ACCATGTGTCTTGAGTATCTTTAGACAAAGCAGGCAGGATGGTCCAGCCTTGGGATGAAAGTGAGGGGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR CCA 72 bp | ATACCTGAAGGTAAATTGACAATGCTTTCTTCTCAGTaGCAGGGGAGTCCTGTTATGGGCACAGACCACTCT | + |
|
Preference number: 3 (lower is better) Translates to: IPEGKLTMLSSQ*QGSPVMGTDHS Trigger: AGAGTGGTCTGTGCCCATAACAGGACTCCCCTGCCACTGAGAAGAAAGCATTGTCAATTTACCTTCAGGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR-3UTR CAA 90 bp | AGACCCAATAGTATTTGTCACCTCATCACTCTGGGTCCTGGAAACTTCTCCTTTCAGCGAAAGGCACTTTaGTTTTCAAGCCAGGTGCTA | + |
|
Preference number: 3 (lower is better) Translates to: RPNSICHLITLGPGNFSFQRKAL*FSSQVL Trigger: TAGCACCTGGCTTGAAAACAAAAGTGCCTTTCGCTG...AAAGGAGAAGTTTCCAGGACCCAGAGTGATGAGGTGACAAATACTATTGGGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS-3UTR GCA 90 bp | TGGAGGAGCCCAGGTACAGTGAGGCTGGTGGTGTGCGGTTCCTGCCAAACCCTGTGGAGCCCTTCTCTCTaGTCGTCCGGCATGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: WRSPGTVRLVVCGSCQTLWSPSL*SSGMPG Trigger: CCCTGGCATGCCGGACGAGCAGAGAGAAGGGCTCCA...CAGGGTTTGGCAGGAACCGCACACCACCAGCCTCACTGTACCTGGGCTCCTCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS-3UTR TCA 90 bp | GCTGCCCAGCATGCAGAGTGTCCCACTGCATACAATGGGCACAGGAGACAAGGGCTCTCAGCCTCCTGCTaGGCAGCTGCCTCCCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: AAQHAECPTAYNGHRRQGLSASC*AAASLA Trigger: TGCAAGGGAGGCAGCTGCTCAGCAGGAGGCTGAGAG...CCCTTGTCTCCTGTGCCCATTGTATGCAGTGGGACACTCTGCATGCTGGGCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS-3UTR GCA 90 bp | GCTGCCCAGCATGCAGAGTGTCCCACTGCATACAATGGGCACAGGAGACAAGGGAGTCCCCGAAACCGCTaGCGCAGCACCATGTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: AAQHAECPTAYNGHRRQGSPRNR*RSTMSG Trigger: GCCAGACATGGTGCTGCGGCAGCGGTTTCGGGGACT...CCCTTGTCTCCTGTGCCCATTGTATGCAGTGGGACACTCTGCATGCTGGGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS-3UTR GCA 90 bp | CCCAGCCTGAGACCAGCAGCGGAAGAGATCGACACAAAGACAGGCCAAGGTGGGCCCACCTCAGCACTCTaGATGAAGTCGTGGAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PSLRPAAEEIDTKTGQGGPTSAL*MKSWSS Trigger: AGAGCTCCACGACTTCATGCAGAGTGCTGAGGTGGG...CCCACCTTGGCCTGTCTTTGTGTCGATCTCTTCCGCTGCTGGTCTCAGGCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS-3UTR CCA 90 bp | TCGGGTCCGGCAAGCCAGTGTCAGGCAGCTCTGCCACCAGCCATCAAAGCCAAACTCTGCATGAAGTCGTaGAGCTCTGGGCTCACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SGPASQCQAALPPAIKAKLCMKS*SSGLTW Trigger: CCAAGTGAGCCCAGAGCTCCACGACTTCATGCAGAG...TTTGGCTTTGATGGCTGGTGGCAGAGCTGCCTGACACTGGCTTGCCGGACCCGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS-3UTR CCA 90 bp | TGTCCCACTGCATACAATGGGCACAGGAGACAAGGGGATGGGCAGGGGACATGTGGGAACAGCTGCAGCTaGAACTTAGGGGCCCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: CPTAYNGHRRQGDGQGTCGNSCS*NLGAHS Trigger: GGAGTGGGCCCCTAAGTTCCAGCTGCAGCTGTTCCC...ACATGTCCCCTGCCCATCCCCTTGTCTCCTGTGCCCATTGTATGCAGTGGGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS-3UTR TCA 90 bp | CCCAGCCTGAGACCAGCAGCGGAAGAGATCGACACAAAGACAGGCCAAGGTGGGCCACCAGCAGAAATGTaGCCACGATGTCATGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: PSLRPAAEEIDTKTGQGGPPAEM*PRCHGS Trigger: GCTACCATGACATCGTGGTCACATTTCTGCTGGTGG...CCCACCTTGGCCTGTCTTTGTGTCGATCTCTTCCGCTGCTGGTCTCAGGCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS-3UTR TCA 90 bp | CCCAGCCTGAGACCAGCAGCGGAAGAGATCGACACAAAGACAGGCCAAGGTGGGATGTCTGGCCTCTGCTaGGTTGATGCCAGCTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PSLRPAAEEIDTKTGQGGMSGLC*VDASSK Trigger: CTTTGAGCTGGCATCAACTCAGCAGAGGCCAGACAT...CCCACCTTGGCCTGTCTTTGTGTCGATCTCTTCCGCTGCTGGTCTCAGGCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS-3UTR CCA 90 bp | TCGGGTCCGGCAAGCCAGTGTCAGGCAGCTCTGCCACCAGCCATCAAAGCCAAAATCTGGGACAACAGGTaGTGGACAGAGGCCATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SGPASQCQAALPPAIKAKIWDNR*WTEAMS Trigger: TGACATGGCCTCTGTCCACCACCTGTTGTCCCAGAT...TTTGGCTTTGATGGCTGGTGGCAGAGCTGCCTGACACTGGCTTGCCGGACCCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS-3UTR GCA 90 bp | TCGGGTCCGGCAAGCCAGTGTCAGGCAGCTCTGCCACCAGCCATCAAAGCCAAAAAGTCCATCAGGACGTaGCCAAACCAGGTGATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SGPASQCQAALPPAIKAKKSIRT*PNQVIS Trigger: GCTTATCACCTGGTTTGGGCACGTCCTGATGGACTT...TTTGGCTTTGATGGCTGGTGGCAGAGCTGCCTGACACTGGCTTGCCGGACCCGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS-3UTR CCA 90 bp | TCTACGTGCTGGCAAGTTTCCAAGGACATTCCCAGCCTGAGACCAGCAGCGGAAATGGGCATAAGTGGGTaGCAGGCCAGGAAGAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: STCWQVSKDIPSLRPAAEMGISG*QARKKS Trigger: CGACTTCTTCCTGGCCTGCCACCCACTTATGCCCAT...TTCCGCTGCTGGTCTCAGGCTGGGAATGTCCTTGGAAACTTGCCAGCACGTAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS-3UTR CCA 90 bp | TGGAGGAGCCCAGGTACAGTGAGGCTGGTGGTGTGCGGTTCCTGCCAAACCCTGAAAGCGGTTGGTCCTTaGTTTGGTCAGGACATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: WRSPGTVRLVVCGSCQTLKAVGP*FGQDIF Trigger: AAAGATGTCCTGACCAAACCAAGGACCAACCGCTTT...CAGGGTTTGGCAGGAACCGCACACCACCAGCCTCACTGTACCTGGGCTCCTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS-3UTR TCA 90 bp | TGGAGGAGCCCAGGTACAGTGAGGCTGGTGGTGTGCGGTTCCTGCCAAACCCTGGGCTCACTTGGTCAATaGTGGGCATCAGATAATTTA | + |
|
Preference number: 4 (lower is better) Translates to: WRSPGTVRLVVCGSCQTLGSLGQ*WASDNL Trigger: TAAATTATCTGATGCCCATCATTGACCAAGTGAGCC...CAGGGTTTGGCAGGAACCGCACACCACCAGCCTCACTGTACCTGGGCTCCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS-3UTR TCA 90 bp | TGTCCCACTGCATACAATGGGCACAGGAGACAAGGGGATGGGCAGGGGACATGTTCAGAAGGGGGAAACTaGACAAAGAGGTCTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CPTAYNGHRRQGDGQGTCSEGGN*TKRSPA Trigger: AGCAGGAGACCTCTTTGTTCAGTTTCCCCCTTCTGA...ACATGTCCCCTGCCCATCCCCTTGTCTCCTGTGCCCATTGTATGCAGTGGGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS-3UTR CCA 90 bp | TCTACGTGCTGGCAAGTTTCCAAGGACATTCCCAGCCTGAGACCAGCAGCGGAATCGATTAGCTCTTCCTaGAGCCCTTCTCTCTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: STCWQVSKDIPSLRPAAESISSS*SPSLCS Trigger: CGAGCAGAGAGAAGGGCTCCAGGAAGAGCTAATCGA...TTCCGCTGCTGGTCTCAGGCTGGGAATGTCCTTGGAAACTTGCCAGCACGTAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| 3UTR CAA 72 bp | GAGGGCATCTCTGGGCCCAACTTTTTAGGCAGTGACTaGGGTAACCAGGTGCTCCAGAGCCACTTTTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: EGISGPNFLGSD*GNQVLQSHFST Trigger: TGTTGAAAAGTGGCTCTGGAGCACCTGGTTACCCAAGTCACTGCCTAAAAAGTTGGGCCCAGAGATGCCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS-3UTR TCA 90 bp | AAAGAACAGGGAGACACGGGCAACATCATCCTGGTGATTAACATTCCTCTGCACGCCATACTTGGCACCTaGTCTCATCAGTCAGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KEQGDTGNIILVINIPLHAILGT*SHQSGA Trigger: GGCTCCTGACTGATGAGATCAGGTGCCAAGTATGGC...GTGCAGAGGAATGTTAATCACCAGGATGATGTTGCCCGTGTCTCCCTGTTCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS-3UTR GCA 90 bp | AACCCTTTAATCACAGCAACTTTACCCTCCTTCTGGAAATGGGGAGAGCTTGGTCAGTCCAGGACTTCCTaGTCCCGGTACAGCACGATC | + |
|
Preference number: 4 (lower is better) Translates to: NPLITATLPSFWKWGELGQSRTS*SRYSTI Trigger: GATCGTGCTGTACCGGGAGCAGGAAGTCCTGGACTG...ACCAAGCTCTCCCCATTTCCAGAAGGAGGGTAAAGTTGCTGTGATTAAAGGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS-3UTR GCA 90 bp | AGACCCAATAGTATTTGTCACCTCATCACTCTGGGTCCTGGAAACTTCTCCTTTAGTGGAGCTGAGGGTTaGGATCCAGGACGAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RPNSICHLITLGPGNFSFSGAEG*DPGRGG Trigger: TCCTCCTCGTCCTGGATCGCAACCCTCAGCTCCACT...AAAGGAGAAGTTTCCAGGACCCAGAGTGATGAGGTGACAAATACTATTGGGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS-3UTR GCA 90 bp | AACCCTTTAATCACAGCAACTTTACCCTCCTTCTGGAAATGGGGAGAGCTTGGTCTCCTGCTGAGCAGCTaGCTCCCTTGCAAGTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NPLITATLPSFWKWGELGLLLSS*LPCKFR Trigger: TCTGAACTTGCAAGGGAGGCAGCTGCTCAGCAGGAG...ACCAAGCTCTCCCCATTTCCAGAAGGAGGGTAAAGTTGCTGTGATTAAAGGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS-3UTR GCA 90 bp | CTTTGTAGGTTTTGTCATGTGGCTTGTAGAGGAGAAAGAACAGGGAGACACGGGCGTCAGCCCCATCACTaGCAGTTTCACAAAGCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LCRFCHVACRGERTGRHGRQPHH*QFHKAV Trigger: AACCGCTTTGTGAAACTGGCAGTGATGGGGCTGACG...CCCGTGTCTCCCTGTTCTTTCTCCTCTACAAGCCACATGACAAAACCTACAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS-3UTR CCA 90 bp | AACCCTTTAATCACAGCAACTTTACCCTCCTTCTGGAAATGGGGAGAGCTTGGTGGGCAGCCAAGTCGATaGGATCACTGTTCAGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NPLITATLPSFWKWGELGGQPSR*DHCSEP Trigger: AGGCTCTGAACAGTGATCCCATCGACTTGGCTGCCC...ACCAAGCTCTCCCCATTTCCAGAAGGAGGGTAAAGTTGCTGTGATTAAAGGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS-3UTR CCA 90 bp | AACCCTTTAATCACAGCAACTTTACCCTCCTTCTGGAAATGGGGAGAGCTTGGTTGGGACAACAGGTGGTaGACAGAGGCCATGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: NPLITATLPSFWKWGELGWDNRW*TEAMSQ Trigger: CTGTGACATGGCCTCTGTCCACCACCTGTTGTCCCA...ACCAAGCTCTCCCCATTTCCAGAAGGAGGGTAAAGTTGCTGTGATTAAAGGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS-3UTR GCA 90 bp | GTCTTTGTAGGTTTTGTCATGTGGCTTGTAGAGGAGAAAGAACAGGGAGACACGTATAACCTCACAACGTaGCTGAAGTCCATCAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: VFVGFVMWLVEEKEQGDTYNLTT*LKSIRT Trigger: CGTCCTGATGGACTTCAGGCACGTTGTGAGGTTATA...CGTGTCTCCCTGTTCTTTCTCCTCTACAAGCCACATGACAAAACCTACAAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS-3UTR CCA 90 bp | ACGGGCAACATCATCCTGGTGATTAACATTCCTCTGCACATGAGCTCTAGGCTGAAATCCCTGAGGTGGTaGGTAGACAATTTTTCTACC | + |
|
Preference number: 4 (lower is better) Translates to: TGNIILVINIPLHMSSRLKSLRW*VDNFST Trigger: GGTAGAAAAATTGTCTACCCACCACCTCAGGGATTT...CAGCCTAGAGCTCATGTGCAGAGGAATGTTAATCACCAGGATGATGTTGCCCGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS-3UTR CCA 90 bp | CTTTGTAGGTTTTGTCATGTGGCTTGTAGAGGAGAAAGAACAGGGAGACACGGGAATTTAGGATGTGCTTaGTGTTGTCCATTGTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LCRFCHVACRGERTGRHGNLGCA*CCPLWD Trigger: ATCCCACAATGGACAACACCAAGCACATCCTAAATT...CCCGTGTCTCCCTGTTCTTTCTCCTCTACAAGCCACATGACAAAACCTACAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS-3UTR CCA 90 bp | CATAAAAATTTAATTAGAACCCAGCTTGAGTCTATCTCTGATTCTGACCAGCTAAGCTCTGGGCTCACTTaGTCAATGATGGGCATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HKNLIRTQLESISDSDQLSSGLT*SMMGIR Trigger: TCTGATGCCCATCATTGACCAAGTGAGCCCAGAGCT...TAGCTGGTCAGAATCAGAGATAGACTCAAGCTGGGTTCTAATTAAATTTTTATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS-3UTR CCA 90 bp | CATAAAAATTTAATTAGAACCCAGCTTGAGTCTATCTCTGATTCTGACCAGCTAGAAGTCGTGGAGCTCTaGGCTCACTTGGTCAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: HKNLIRTQLESISDSDQLEVVEL*AHLVND Trigger: ATCATTGACCAAGTGAGCCCAGAGCTCCACGACTTC...TAGCTGGTCAGAATCAGAGATAGACTCAAGCTGGGTTCTAATTAAATTTTTATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS-3UTR CCA 90 bp | CATAAAAATTTAATTAGAACCCAGCTTGAGTCTATCTCTGATTCTGACCAGCTAAGCTTAGGCCATACTTaGCACCTGATCTCATCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: HKNLIRTQLESISDSDQLSLGHT*HLISSV Trigger: GACTGATGAGATCAGGTGCCAAGTATGGCCTAAGCT...TAGCTGGTCAGAATCAGAGATAGACTCAAGCTGGGTTCTAATTAAATTTTTATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS GCA 90 bp | CAGCACTTGCTGGTAGTCCTTGCTCATGTCTCGAAGGTCCTTCCCTaGCTTCCCTGCGCCGCGGTCCCAGCGGCCGGCGGAGCCGTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: QHLLVVLAHVSKVLP*LPCAAVPAAGGAVA Trigger: GGCGACGGCTCCGCCGGCCGCTGGGACCGCGGCGCAGGGAAGGCAGGGAAGGACCTTCGAGACATGAGCAAGGACTACCAGCAAGTGCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144252.8 |
||
| CDS-3UTR CAA 90 bp | CCCAGCCTGAGACCAGCAGCGGAAGAGATCGACACAAAGACAGGCCAAGGTGGGGAGCTCTGGGCTCACTaGGTCAATGATGGGCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: PSLRPAAEEIDTKTGQGGELWAH*VNDGHQ Trigger: CTGATGCCCATCATTGACCAAGTGAGCCCAGAGCTC...CCCACCTTGGCCTGTCTTTGTGTCGATCTCTTCCGCTGCTGGTCTCAGGCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS CCA 90 bp | GGCGGTGGCTCACTGGTGTTCACGTTGAGGAGCTTAGGCCATACTTaGCACCTGATCTCATCAGTCAGGAGCCCTCCCTCACTGATAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GGGSLVFTLRSLGHT*HLISSVRSPPSLIA Trigger: GGCTATCAGTGAGGGAGGGCTCCTGACTGATGAGATCAGGTGCCAAGTATGGCCTAAGCTCCTCAACGTGAACACCAGTGAGCCACCGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028963.14 ENSMUST00000147591.2 |
||
| CDS CCA 90 bp | CGAGGGCCACCGTCAGCCCCATCACTGCCAGTTTCACAAAGCGGTTaGTCCTTGGTTTGGTCAGGACATCTTTTGTTCGAGCCTCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RGPPSAPSLPVSQSG*SLVWSGHLLFEPQA Trigger: GGCCTGAGGCTCGAACAAAAGATGTCCTGACCAAACCAAGGACCAACCGCTTTGTGAAACTGGCAGTGATGGGGCTGACGGTGGCCCTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS TCA 90 bp | TCCCCGAAACCGCTGCCGCAGCACCATGTCTGGCCTCTGCTGAGTTaGTGCCAGCTCAAAGTCTTTGAAAGTAGAGGCTGCCGTTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SPKPLPQHHVWPLLS*CQLKVFESRGCRSL Trigger: GAGAGAACGGCAGCCTCTACTTTCAAAGACTTTGAGCTGGCATCAACTCAGCAGAGGCCAGACATGGTGCTGCGGCAGCGGTTTCGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS GCA 90 bp | AGAGGCTGCCGTTCTCTCAGCCTCCTGCTGAGCAGCTGCCTCCCTTaGAAGTTCAGAAGGGGGAAACTGAACAAAGAGGTCTCCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RGCRSLSLLLSSCLP*KFRRGKLNKEVSCS Trigger: AGAGCAGGAGACCTCTTTGTTCAGTTTCCCCCTTCTGAACTTGCAAGGGAGGCAGCTGCTCAGCAGGAGGCTGAGAGAACGGCAGCCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS-3UTR CAA 90 bp | TGTCCCACTGCATACAATGGGCACAGGAGACAAGGGGATGGGCAGGGGACATGTGACGTCCAGCAGCACTaGCTGGTAGTCCTTGCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: CPTAYNGHRRQGDGQGTCDVQQH*LVVLAH Trigger: ATGAGCAAGGACTACCAGCAAGTGCTGCTGGACGTC...ACATGTCCCCTGCCCATCCCCTTGTCTCCTGTGCCCATTGTATGCAGTGGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS TCA 90 bp | CAGCACTTGCTGGTAGTCCTTGCTCATGTCTCGAAGGTCCTTCCTTaGCACAGGCGGTGGCTCACTGGTGTTCACGTTGAGGAGCTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: QHLLVVLAHVSKVLP*HRRWLTGVHVEELR Trigger: CCTAAGCTCCTCAACGTGAACACCAGTGAGCCACCGCCTGTGTCAAGGAAGGACCTTCGAGACATGAGCAAGGACTACCAGCAAGTGCTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028963.14 ENSMUST00000147591.2 |
||
| CDS TCA 90 bp | AGAAGTCCCCGAAACCGCTGCCGCAGCACCATGTCTGGCCTCTGCTaGGTTGATGCCAGCTCAAAGTCTTTGAAAGTAGAGGCTGCCGTT | + |
|
Preference number: 5 (lower is better) Translates to: RSPRNRCRSTMSGLC*VDASSKSLKVEAAV Trigger: AACGGCAGCCTCTACTTTCAAAGACTTTGAGCTGGCATCAACTCAGCAGAGGCCAGACATGGTGCTGCGGCAGCGGTTTCGGGGACTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS-3UTR CAA 90 bp | CTGCCCAGCATGCAGAGTGTCCCACTGCATACAATGGGCACAGGAGACAAGGGGAGGATGTGCTTGGTGTaGTCCATTGTGGGATCCATG | + |
|
Preference number: 5 (lower is better) Translates to: LPSMQSVPLHTMGTGDKGRMCLV*SIVGSM Trigger: CATGGATCCCACAATGGACAACACCAAGCACATCCT...CCCCTTGTCTCCTGTGCCCATTGTATGCAGTGGGACACTCTGCATGCTGGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS-3UTR CAA 90 bp | AGAGCCACTTTTCAACAGGAGAGGTGCAGAGAGCACTCGGGTCCGGCAAGCCAGCAAAGCGGTTGGTCCTaGGTTTGGTCAGGACATCTT | + |
|
Preference number: 5 (lower is better) Translates to: RATFQQERCREHSGPASQQSGWS*VWSGHL Trigger: AAGATGTCCTGACCAAACCAAGGACCAACCGCTTTG...CTGGCTTGCCGGACCCGAGTGCTCTCTGCACCTCTCCTGTTGAAAAGTGGCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS-3UTR CAA 90 bp | GCTGCCCAGCATGCAGAGTGTCCCACTGCATACAATGGGCACAGGAGACAAGGGAGTTTCACAAAGCGGTaGGTCCTTGGTTTGGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AAQHAECPTAYNGHRRQGSFTKR*VLGLVR Trigger: CCTGACCAAACCAAGGACCAACCGCTTTGTGAAACT...CCCTTGTCTCCTGTGCCCATTGTATGCAGTGGGACACTCTGCATGCTGGGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS GCA 90 bp | CTCCCTTGCAAGTTCAGAAGGGGGAAACTGAACAAAGAGGTCTCCTaGTCTGCTGATGAGCGTCTCATAGGGCAGGTCCTGAGGGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: LPCKFRRGKLNKEVS*SADERLIGQVLRDL Trigger: CAGATCCCTCAGGACCTGCCCTATGAGACGCTCATCAGCAGAGCAGGAGACCTCTTTGTTCAGTTTCCCCCTTCTGAACTTGCAAGGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS CCA 90 bp | CACCGTCAGCCCCATCACTGCCAGTTTCACAAAGCGGTTGGTCCTTaGTTTGGTCAGGACATCTTTTGTTCGAGCCTCAGGCCTCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: HRQPHHCQFHKAVGP*FGQDIFCSSLRPQK Trigger: CTTCTGAGGCCTGAGGCTCGAACAAAAGATGTCCTGACCAAACCAAGGACCAACCGCTTTGTGAAACTGGCAGTGATGGGGCTGACGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS GCA 90 bp | ATAAGTGGGTGGCAGGCCAGGAAGAAGTCGTATAACCTCACAACGTaGCTGAAGTCCATCAGGACGTGCCCAAACCAGGTGATAAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ISGWQARKKSYNLTT*LKSIRTCPNQVISQ Trigger: CTGGCTTATCACCTGGTTTGGGCACGTCCTGATGGACTTCAGGCACGTTGTGAGGTTATACGACTTCTTCCTGGCCTGCCACCCACTTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS GCA 90 bp | TTTGAAAGTAGAGGCTGCCGTTCTCTCAGCCTCCTGCTGAGCAGCTaGCTCCCTTGCAAGTTCAGAAGGGGGAAACTGAACAAAGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: FESRGCRSLSLLLSS*LPCKFRRGKLNKEV Trigger: GACCTCTTTGTTCAGTTTCCCCCTTCTGAACTTGCAAGGGAGGCAGCTGCTCAGCAGGAGGCTGAGAGAACGGCAGCCTCTACTTTCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS-3UTR CAA 90 bp | ACGGGCAACATCATCCTGGTGATTAACATTCCTCTGCACATGAGCTCTAGGCTGGAGCAGCTGCCTCCCTaGCAAGTTCAGAAGGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: TGNIILVINIPLHMSSRLEQLPP*QVQKGE Trigger: TTCCCCCTTCTGAACTTGCAAGGGAGGCAGCTGCTC...CAGCCTAGAGCTCATGTGCAGAGGAATGTTAATCACCAGGATGATGTTGCCCGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS-3UTR CAA 90 bp | CCCAGGCTAATGTTTTCTCCCCTCACTTTCATCCCAAGGCTGGACCATCCTGCCCGGTTGGTCCTTGGTTaGGTCAGGACATCTTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: PRLMFSPLTFIPRLDHPARLVLG*VRTSFV Trigger: AACAAAAGATGTCCTGACCAAACCAAGGACCAACCG...GGCAGGATGGTCCAGCCTTGGGATGAAAGTGAGGGGAGAAAACATTAGCCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS GCA 90 bp | GGCAGCCAAGTCGATGGGATCACTGTTCAGAGCCTGGTGTATCTCTaGCACCTTCTTTTTCCTTTTGGCATTAAAGTCTGCCTTCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GSQVDGITVQSLVYL*HLLFPFGIKVCLPC Trigger: GCAGGGAAGGCAGACTTTAATGCCAAAAGGAAAAAGAAGGTGGCAGAGATACACCAGGCTCTGAACAGTGATCCCATCGACTTGGCTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS-3UTR CAA 90 bp | AAAGAACAGGGAGACACGGGCAACATCATCCTGGTGATTAACATTCCTCTGCACGCCAGCTCAAAGTCTTaGAAAGTAGAGGCTGCCGTT | + |
|
Preference number: 5 (lower is better) Translates to: KEQGDTGNIILVINIPLHASSKS*KVEAAV Trigger: AACGGCAGCCTCTACTTTCAAAGACTTTGAGCTGGC...GTGCAGAGGAATGTTAATCACCAGGATGATGTTGCCCGTGTCTCCCTGTTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS-3UTR CAA 90 bp | GTCTTTGTAGGTTTTGTCATGTGGCTTGTAGAGGAGAAAGAACAGGGAGACACGTGGTCAGGACATCTTTaGTTCGAGCCTCAGGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: VFVGFVMWLVEEKEQGDTWSGHL*FEPQAS Trigger: TGAGGCCTGAGGCTCGAACAAAAGATGTCCTGACCA...CGTGTCTCCCTGTTCTTTCTCCTCTACAAGCCACATGACAAAACCTACAAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS GCA 72 bp | CTTGCTCATGTCTCGAAGGTCCTTCCCTGCCTTCCCTaGGCCGCGGTCCCAGCGGCCGGCGGAGCCGTCGCC | + |
|
Preference number: 6 (lower is better) Translates to: LAHVSKVLPCLP*AAVPAAGGAVA Trigger: GGCGACGGCTCCGCCGGCCGCTGGGACCGCGGCGCAGGGAAGGCAGGGAAGGACCTTCGAGACATGAGCAAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144252.8 |
||
| CDS GCA 72 bp | CTGGTAGTCCTTGCTCATGTCTCGAAGGTCCTTCCCTaGCTTCCCTGCGCCGCGGTCCCAGCGGCCGGCGGA | + |
|
Preference number: 6 (lower is better) Translates to: LVVLAHVSKVLP*LPCAAVPAAGG Trigger: TCCGCCGGCCGCTGGGACCGCGGCGCAGGGAAGGCAGGGAAGGACCTTCGAGACATGAGCAAGGACTACCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144252.8 |
||
| CDS GCA 72 bp | TGCTGCTGCTCCGAGGGCCACCGTCAGCCCCATCACTaGCAGTTTCACAAAGCGGTTGGTCCTTGGTTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: CCCSEGHRQPHH*QFHKAVGPWFG Trigger: ACCAAACCAAGGACCAACCGCTTTGTGAAACTGGCAGTGATGGGGCTGACGGTGGCCCTCGGAGCAGCAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS CAA 90 bp | CCGAGGGCCACCGTCAGCCCCATCACTGCCAGTTTCACAAAGCGGTaGGTCCTTGGTTTGGTCAGGACATCTTTTGTTCGAGCCTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: PRATVSPITASFTKR*VLGLVRTSFVRASG Trigger: GCCTGAGGCTCGAACAAAAGATGTCCTGACCAAACCAAGGACCAACCGCTTTGTGAAACTGGCAGTGATGGGGCTGACGGTGGCCCTCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS GCA 72 bp | AGAGGCTGCCGTTCTCTCAGCCTCCTGCTGAGCAGCTaGCTCCCTTGCAAGTTCAGAAGGGGGAAACTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: RGCRSLSLLLSS*LPCKFRRGKLN Trigger: GTTCAGTTTCCCCCTTCTGAACTTGCAAGGGAGGCAGCTGCTCAGCAGGAGGCTGAGAGAACGGCAGCCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS CCA 72 bp | TCCAGGACGAGGAGGATGATATCGATTAGCTCTTCCTaGAGCCCTTCTCTCTGCTCGTCCGGCATGCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SRTRRMISISSS*SPSLCSSGMPG Trigger: CCCTGGCATGCCGGACGAGCAGAGAGAAGGGCTCCAGGAAGAGCTAATCGATATCATCCTCCTCGTCCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028963.14 ENSMUST00000144252.8 ENSMUST00000147591.2 |
||
| CDS CAA 90 bp | TCACTGTTCAGAGCCTGGTGTATCTCTGCCACCTTCTTTTTCCTTTaGGCATTAAAGTCTGCCTTCCCTGCGCCGCGGTCCCAGCGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: SLFRAWCISATFFFL*ALKSAFPAPRSQRP Trigger: CGGCCGCTGGGACCGCGGCGCAGGGAAGGCAGACTTTAATGCCAAAAGGAAAAAGAAGGTGGCAGAGATACACCAGGCTCTGAACAGTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS CAA 90 bp | AGGCGGTGGCTCACTGGTGTTCACGTTGAGGAGCTTAGGCCATACTaGGCACCTGATCTCATCAGTCAGGAGCCCTCCCTCACTGATAGC | + |
|
Preference number: 6 (lower is better) Translates to: RRWLTGVHVEELRPY*APDLISQEPSLTDS Trigger: GCTATCAGTGAGGGAGGGCTCCTGACTGATGAGATCAGGTGCCAAGTATGGCCTAAGCTCCTCAACGTGAACACCAGTGAGCCACCGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028963.14 ENSMUST00000147591.2 |
||
| CDS CAA 72 bp | GAAGCGCCGAAGAGATCGCCTGACGTCCAGCAGCACTaGCTGGTAGTCCTTGCTCATGTCTCGAAGGTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: EAPKRSPDVQQH*LVVLAHVSKVL Trigger: AAGGACCTTCGAGACATGAGCAAGGACTACCAGCAAGTGCTGCTGGACGTCAGGCGATCTCTTCGGCGCTTC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028963.14 ENSMUST00000144252.8 ENSMUST00000147591.2 |
||
| CDS CAA 90 bp | CGAAGGTCCTTCCTTGACACAGGCGGTGGCTCACTGGTGTTCACGTaGAGGAGCTTAGGCCATACTTGGCACCTGATCTCATCAGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RRSFLDTGGGSLVFT*RSLGHTWHLISSVR Trigger: CCTGACTGATGAGATCAGGTGCCAAGTATGGCCTAAGCTCCTCAACGTGAACACCAGTGAGCCACCGCCTGTGTCAAGGAAGGACCTTCG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028963.14 ENSMUST00000147591.2 |
||
| CDS CAA 90 bp | CCAGTTTCACAAAGCGGTTGGTCCTTGGTTTGGTCAGGACATCTTTaGTTCGAGCCTCAGGCCTCAGAAGTCCCCGAAACCGCTGCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: PVSQSGWSLVWSGHL*FEPQASEVPETAAA Trigger: TGCGGCAGCGGTTTCGGGGACTTCTGAGGCCTGAGGCTCGAACAAAAGATGTCCTGACCAAACCAAGGACCAACCGCTTTGTGAAACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS TCA 72 bp | CTGGTAGTCCTTGCTCATGTCTCGAAGGTCCTTCCTTaGCACAGGCGGTGGCTCACTGGTGTTCACGTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: LVVLAHVSKVLP*HRRWLTGVHVE Trigger: CTCAACGTGAACACCAGTGAGCCACCGCCTGTGTCAAGGAAGGACCTTCGAGACATGAGCAAGGACTACCAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028963.14 ENSMUST00000147591.2 |
||
| CDS GCA 72 bp | TGGCAGGCCAGGAAGAAGTCGTATAACCTCACAACGTaGCTGAAGTCCATCAGGACGTGCCCAAACCAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: WQARKKSYNLTT*LKSIRTCPNQV Trigger: CACCTGGTTTGGGCACGTCCTGATGGACTTCAGGCACGTTGTGAGGTTATACGACTTCTTCCTGGCCTGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS CCA 72 bp | AAGATGGTCCCCACCTCAGCACTCTGCATGAAGTCGTaGAGCTCTGGGCTCACTTGGTCAATGATGGGCATC | + |
|
Preference number: 6 (lower is better) Translates to: KMVPTSALCMKS*SSGLTWSMMGI Trigger: GATGCCCATCATTGACCAAGTGAGCCCAGAGCTCCACGACTTCATGCAGAGTGCTGAGGTGGGGACCATCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS CAA 90 bp | GTCAGCCCCATCACTGCCAGTTTCACAAAGCGGTTGGTCCTTGGTTaGGTCAGGACATCTTTTGTTCGAGCCTCAGGCCTCAGAAGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: VSPITASFTKRLVLG*VRTSFVRASGLRSP Trigger: GGGACTTCTGAGGCCTGAGGCTCGAACAAAAGATGTCCTGACCAAACCAAGGACCAACCGCTTTGTGAAACTGGCAGTGATGGGGCTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS CAA 90 bp | CCACCGTCAGCCCCATCACTGCCAGTTTCACAAAGCGGTTGGTCCTaGGTTTGGTCAGGACATCTTTTGTTCGAGCCTCAGGCCTCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: PPSAPSLPVSQSGWS*VWSGHLLFEPQASE Trigger: TTCTGAGGCCTGAGGCTCGAACAAAAGATGTCCTGACCAAACCAAGGACCAACCGCTTTGTGAAACTGGCAGTGATGGGGCTGACGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS TCA 72 bp | AGTGGAGCTGAGGGTTGCGATCCAGGACGAGGAGGATaGTATCGATTAGCTCTTCCTGGAGCCCTTCTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SGAEGCDPGRGG*YRLALPGALLS Trigger: AGAGAGAAGGGCTCCAGGAAGAGCTAATCGATATCATCCTCCTCGTCCTGGATCGCAACCCTCAGCTCCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028963.14 ENSMUST00000144252.8 ENSMUST00000147591.2 |
||
| CDS TCA 72 bp | CGAAACCGCTGCCGCAGCACCATGTCTGGCCTCTGCTaGGTTGATGCCAGCTCAAAGTCTTTGAAAGTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: RNRCRSTMSGLC*VDASSKSLKVE Trigger: CTCTACTTTCAAAGACTTTGAGCTGGCATCAACTCAGCAGAGGCCAGACATGGTGCTGCGGCAGCGGTTTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS CCA 72 bp | TCACTGGTGTTCACGTTGAGGAGCTTAGGCCATACTTaGCACCTGATCTCATCAGTCAGGAGCCCTCCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SLVFTLRSLGHT*HLISSVRSPPS Trigger: TGAGGGAGGGCTCCTGACTGATGAGATCAGGTGCCAAGTATGGCCTAAGCTCCTCAACGTGAACACCAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028963.14 ENSMUST00000147591.2 |
||
| CDS CAA 72 bp | AGAGCCTGGTGTATCTCTGCCACCTTCTTTTTCCTTTaGGCATTAAAGTCTGCCTTCCCTGCGCCGCGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RAWCISATFFFL*ALKSAFPAPRS Trigger: GGACCGCGGCGCAGGGAAGGCAGACTTTAATGCCAAAAGGAAAAAGAAGGTGGCAGAGATACACCAGGCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS CAA 72 bp | CAAAGCGGTTGGTCCTTGGTTTGGTCAGGACATCTTTaGTTCGAGCCTCAGGCCTCAGAAGTCCCCGAAACC | + |
|
Preference number: 6 (lower is better) Translates to: QSGWSLVWSGHL*FEPQASEVPET Trigger: GGTTTCGGGGACTTCTGAGGCCTGAGGCTCGAACAAAAGATGTCCTGACCAAACCAAGGACCAACCGCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS GCA 72 bp | TATAACCTCACAACGTGCCTGAAGTCCATCAGGACGTaGCCAAACCAGGTGATAAGCCAGCTGAGGGCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: YNLTTCLKSIRT*PNQVISQLRAK Trigger: CTTTGCCCTCAGCTGGCTTATCACCTGGTTTGGGCACGTCCTGATGGACTTCAGGCACGTTGTGAGGTTATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS GCA 72 bp | AAGTTCAGAAGGGGGAAACTGAACAAAGAGGTCTCCTaGTCTGCTGATGAGCGTCTCATAGGGCAGGTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: KFRRGKLNKEVS*SADERLIGQVL Trigger: CAGGACCTGCCCTATGAGACGCTCATCAGCAGAGCAGGAGACCTCTTTGTTCAGTTTCCCCCTTCTGAACTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS CCA 72 bp | CCCCACCTCAGCACTCTGCATGAAGTCGTGGAGCTCTaGGCTCACTTGGTCAATGATGGGCATCAGATAATT | + |
|
Preference number: 6 (lower is better) Translates to: PHLSTLHEVVEL*AHLVNDGHQII Trigger: AATTATCTGATGCCCATCATTGACCAAGTGAGCCCAGAGCTCCACGACTTCATGCAGAGTGCTGAGGTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS CCA 72 bp | CCCCATCACTGCCAGTTTCACAAAGCGGTTGGTCCTTaGTTTGGTCAGGACATCTTTTGTTCGAGCCTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PHHCQFHKAVGP*FGQDIFCSSLR Trigger: CCTGAGGCTCGAACAAAAGATGTCCTGACCAAACCAAGGACCAACCGCTTTGTGAAACTGGCAGTGATGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS CAA 72 bp | GCCCCATCACTGCCAGTTTCACAAAGCGGTTGGTCCTaGGTTTGGTCAGGACATCTTTTGTTCGAGCCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: APSLPVSQSGWS*VWSGHLLFEPQ Trigger: CTGAGGCTCGAACAAAAGATGTCCTGACCAAACCAAGGACCAACCGCTTTGTGAAACTGGCAGTGATGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS CAA 72 bp | ATCACTGCCAGTTTCACAAAGCGGTTGGTCCTTGGTTaGGTCAGGACATCTTTTGTTCGAGCCTCAGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: ITASFTKRLVLG*VRTSFVRASGL Trigger: GAGGCCTGAGGCTCGAACAAAAGATGTCCTGACCAAACCAAGGACCAACCGCTTTGTGAAACTGGCAGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||
| CDS CAA 72 bp | ACCGTCAGCCCCATCACTGCCAGTTTCACAAAGCGGTaGGTCCTTGGTTTGGTCAGGACATCTTTTGTTCGA | + |
|
Preference number: 6 (lower is better) Translates to: TVSPITASFTKR*VLGLVRTSFVR Trigger: TCGAACAAAAGATGTCCTGACCAAACCAAGGACCAACCGCTTTGTGAAACTGGCAGTGATGGGGCTGACGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028963.14 |
||